View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7514_low_17 (Length: 241)
Name: NF7514_low_17
Description: NF7514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7514_low_17 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 24 - 241
Target Start/End: Complemental strand, 50027574 - 50027357
Alignment:
| Q |
24 |
ggttgtttgaattatgtaagaaaatatgggtttttgatgaacaggtgtgttgagataatgctgaggaagagaagtaggtcaatccagaaagatcaacacc |
123 |
Q |
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| T |
50027574 |
ggttgtttgaattatgtaagaaaaaatgggtttttgatgaacaggtgtgttgagataatgctgaggaagagaagtaggtcaatccagaaagatcaacacc |
50027475 |
T |
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| Q |
124 |
aaatgggtcatctgacaaattctgatactaattctgatcattatgctcaatctcatgctttagggcgtaatatcaaaggcaatccaattttcaatgttcc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50027474 |
aaatgggtcatctgacaaattctgatactaattctgatcattatgctcaatctcatgctttagggcgtaatatcaaaggcaatccaattttcaatgttcc |
50027375 |
T |
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| Q |
224 |
ttgtttgtttgtgggttt |
241 |
Q |
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| T |
50027374 |
ttgtttgtttgtgggttt |
50027357 |
T |
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