View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7515_high_2 (Length: 562)

Name: NF7515_high_2
Description: NF7515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7515_high_2
NF7515_high_2
[»] chr7 (59 HSPs)
chr7 (137-415)||(20175766-20176048)
chr7 (143-277)||(5046982-5047116)
chr7 (143-358)||(15611187-15611402)
chr7 (137-351)||(9501752-9501967)
chr7 (143-364)||(2506959-2507180)
chr7 (141-268)||(10332227-10332355)
chr7 (157-355)||(24751360-24751559)
chr7 (141-310)||(25692569-25692740)
chr7 (141-259)||(1254842-1254960)
chr7 (158-355)||(15170926-15171124)
chr7 (149-319)||(13281882-13282053)
chr7 (143-364)||(5485353-5485574)
chr7 (14-72)||(20176113-20176171)
chr7 (141-370)||(4900477-4900696)
chr7 (170-364)||(6039473-6039667)
chr7 (143-355)||(10418292-10418506)
chr7 (147-339)||(5221120-5221313)
chr7 (143-266)||(21502678-21502803)
chr7 (155-319)||(5471891-5472056)
chr7 (143-341)||(1588987-1589188)
chr7 (236-318)||(10585428-10585510)
chr7 (221-306)||(3585751-3585836)
chr7 (153-340)||(3736089-3736278)
chr7 (170-349)||(9288652-9288831)
chr7 (141-264)||(8052574-8052700)
chr7 (170-357)||(21233837-21234024)
chr7 (143-346)||(144720-144926)
chr7 (141-363)||(2455070-2455293)
chr7 (141-309)||(2505625-2505794)
chr7 (241-355)||(9767520-9767634)
chr7 (141-272)||(9134626-9134759)
chr7 (149-268)||(26249229-26249350)
chr7 (204-324)||(8309947-8310067)
chr7 (141-339)||(19154588-19154788)
chr7 (141-339)||(20753987-20754187)
chr7 (170-268)||(9298524-9298623)
chr7 (186-304)||(9917953-9918072)
chr7 (186-304)||(9925865-9925984)
chr7 (158-223)||(10991127-10991193)
chr7 (141-193)||(8038917-8038969)
chr7 (287-326)||(1585958-1585997)
chr7 (15-54)||(4450709-4450748)
chr7 (15-54)||(10332442-10332481)
chr7 (149-243)||(9722299-9722393)
chr7 (141-316)||(6018132-6018309)
chr7 (177-305)||(39270454-39270583)
chr7 (141-310)||(6046308-6046478)
chr7 (141-264)||(11804525-11804649)
chr7 (233-304)||(17831029-17831100)
chr7 (143-193)||(23128042-23128093)
chr7 (16-54)||(2565944-2565982)
chr7 (204-326)||(3189548-3189670)
chr7 (141-268)||(4450493-4450622)
chr7 (141-272)||(10611530-10611664)
chr7 (143-235)||(20577359-20577453)
chr7 (14-54)||(3585541-3585581)
chr7 (141-235)||(9079028-9079124)
chr7 (155-223)||(10414439-10414507)
chr7 (260-340)||(23897013-23897093)
[»] chr6 (41 HSPs)
chr6 (141-365)||(32759695-32759919)
chr6 (149-366)||(10821962-10822178)
chr6 (143-357)||(30355997-30356211)
chr6 (155-343)||(21060564-21060752)
chr6 (146-303)||(9339129-9339286)
chr6 (166-343)||(21079892-21080069)
chr6 (146-364)||(3357869-3358088)
chr6 (155-268)||(13216465-13216580)
chr6 (141-315)||(22404400-22404575)
chr6 (143-221)||(27961084-27961162)
chr6 (143-318)||(8038198-8038375)
chr6 (236-346)||(8246371-8246481)
chr6 (158-347)||(10504925-10505104)
chr6 (208-325)||(19246042-19246159)
chr6 (143-344)||(2588043-2588245)
chr6 (158-268)||(14726950-14727061)
chr6 (147-309)||(21546922-21547082)
chr6 (148-355)||(9898020-9898229)
chr6 (239-323)||(6629219-6629303)
chr6 (202-358)||(9387350-9387506)
chr6 (170-357)||(23644493-23644681)
chr6 (227-347)||(34479869-34479989)
chr6 (157-357)||(34395525-34395721)
chr6 (141-267)||(8066475-8066603)
chr6 (181-268)||(21845884-21845972)
chr6 (229-356)||(23591380-23591507)
chr6 (155-219)||(15600573-15600639)
chr6 (141-269)||(24469620-24469749)
chr6 (143-266)||(9507418-9507543)
chr6 (147-222)||(22564701-22564778)
chr6 (148-235)||(14723540-14723628)
chr6 (143-274)||(20080555-20080686)
chr6 (170-235)||(17822201-17822267)
chr6 (141-228)||(14076258-14076347)
chr6 (230-339)||(16167580-16167689)
chr6 (168-213)||(20404184-20404229)
chr6 (170-273)||(14639108-14639211)
chr6 (137-193)||(16167716-16167772)
chr6 (149-193)||(16175677-16175721)
chr6 (206-306)||(23087322-23087422)
chr6 (215-307)||(23230187-23230279)
[»] chr1 (48 HSPs)
chr1 (143-365)||(14235433-14235655)
chr1 (148-307)||(27911848-27912008)
chr1 (143-344)||(26101606-26101809)
chr1 (143-337)||(17543263-17543458)
chr1 (149-358)||(16114533-16114743)
chr1 (143-344)||(12011332-12011534)
chr1 (143-326)||(24282766-24282951)
chr1 (166-365)||(26652304-26652503)
chr1 (157-358)||(20033280-20033482)
chr1 (149-297)||(17016987-17017136)
chr1 (143-266)||(22621616-22621743)
chr1 (163-329)||(12262266-12262432)
chr1 (141-339)||(15526942-15527141)
chr1 (141-339)||(15811591-15811790)
chr1 (149-304)||(7881580-7881738)
chr1 (142-377)||(24464330-24464567)
chr1 (143-344)||(27116371-27116568)
chr1 (143-268)||(26581396-26581521)
chr1 (161-307)||(13134249-13134396)
chr1 (141-315)||(15542454-15542630)
chr1 (170-312)||(9403118-9403261)
chr1 (141-310)||(14782310-14782481)
chr1 (141-319)||(44796889-44797068)
chr1 (139-326)||(35133649-35133837)
chr1 (143-344)||(16786241-16786444)
chr1 (141-339)||(23035066-23035264)
chr1 (149-310)||(21333221-21333384)
chr1 (137-310)||(21450548-21450722)
chr1 (238-345)||(25959702-25959808)
chr1 (141-326)||(26647502-26647688)
chr1 (141-268)||(18527642-18527771)
chr1 (141-235)||(22507520-22507616)
chr1 (157-280)||(10063123-10063246)
chr1 (170-268)||(13267667-13267766)
chr1 (207-324)||(9783193-9783310)
chr1 (143-315)||(21848408-21848575)
chr1 (141-235)||(25402581-25402677)
chr1 (15-54)||(21663110-21663149)
chr1 (180-310)||(21663277-21663407)
chr1 (170-304)||(26022181-26022316)
chr1 (15-54)||(27973341-27973380)
chr1 (141-215)||(20107731-20107805)
chr1 (15-48)||(16363667-16363700)
chr1 (140-235)||(18832070-18832167)
chr1 (141-265)||(22626300-22626425)
chr1 (14-54)||(12210303-12210343)
chr1 (19-59)||(14235308-14235348)
chr1 (15-63)||(24464643-24464691)
[»] scaffold0086 (2 HSPs)
scaffold0086 (141-366)||(12940-13165)
scaffold0086 (143-268)||(11916-12041)
[»] chr5 (36 HSPs)
chr5 (143-318)||(25572610-25572786)
chr5 (141-365)||(28254627-28254841)
chr5 (140-358)||(107805-108022)
chr5 (155-356)||(18227348-18227548)
chr5 (149-364)||(26253197-26253411)
chr5 (176-364)||(24188615-24188803)
chr5 (141-376)||(17831408-17831643)
chr5 (156-364)||(23266553-23266763)
chr5 (143-346)||(19761729-19761932)
chr5 (143-355)||(17469706-17469918)
chr5 (148-295)||(28280077-28280225)
chr5 (141-310)||(24658446-24658616)
chr5 (251-357)||(26122142-26122248)
chr5 (141-339)||(18831974-18832173)
chr5 (285-356)||(24849779-24849850)
chr5 (155-249)||(26348284-26348379)
chr5 (171-330)||(24807369-24807529)
chr5 (143-348)||(25920575-25920781)
chr5 (141-268)||(24320668-24320798)
chr5 (227-357)||(26314955-26315085)
chr5 (141-317)||(18939294-18939471)
chr5 (137-272)||(25400878-25401015)
chr5 (177-312)||(23338719-23338855)
chr5 (141-268)||(19003911-19004039)
chr5 (172-319)||(24265456-24265604)
chr5 (172-319)||(24342087-24342235)
chr5 (141-267)||(29987779-29987907)
chr5 (285-364)||(24162302-24162381)
chr5 (252-357)||(13693334-13693440)
chr5 (141-218)||(17336472-17336549)
chr5 (141-268)||(24513332-24513461)
chr5 (253-357)||(24261806-24261910)
chr5 (170-268)||(15520797-15520896)
chr5 (141-223)||(31600221-31600304)
chr5 (172-265)||(22797606-22797700)
chr5 (143-202)||(26122271-26122331)
[»] chr4 (47 HSPs)
chr4 (141-357)||(25118014-25118230)
chr4 (157-377)||(15046715-15046932)
chr4 (157-377)||(15107492-15107709)
chr4 (141-347)||(19547198-19547404)
chr4 (143-356)||(9849856-9850070)
chr4 (141-347)||(10107992-10108197)
chr4 (147-357)||(18447592-18447802)
chr4 (143-339)||(16669869-16670066)
chr4 (149-377)||(17661664-17661892)
chr4 (143-339)||(1832203-1832398)
chr4 (141-310)||(17711086-17711257)
chr4 (166-323)||(22345845-22346003)
chr4 (147-365)||(9053732-9053950)
chr4 (143-346)||(23083446-23083649)
chr4 (155-344)||(17434178-17434367)
chr4 (163-247)||(8140299-8140383)
chr4 (212-344)||(15047520-15047652)
chr4 (212-344)||(15106772-15106904)
chr4 (143-303)||(14573236-14573398)
chr4 (141-335)||(22217140-22217334)
chr4 (170-344)||(26114377-26114551)
chr4 (169-364)||(22527674-22527868)
chr4 (141-219)||(20828285-20828364)
chr4 (146-344)||(25024853-25025052)
chr4 (155-346)||(10236334-10236527)
chr4 (170-310)||(16928704-16928845)
chr4 (227-310)||(8968305-8968388)
chr4 (141-310)||(11782260-11782431)
chr4 (141-330)||(7613496-7613686)
chr4 (137-264)||(15166294-15166423)
chr4 (155-268)||(11512186-11512301)
chr4 (137-268)||(19556680-19556804)
chr4 (141-199)||(11240989-11241047)
chr4 (149-243)||(13588566-13588660)
chr4 (170-267)||(17335531-17335629)
chr4 (242-319)||(17277618-17277695)
chr4 (166-355)||(20316342-20316540)
chr4 (169-277)||(25096114-25096222)
chr4 (14-54)||(15166506-15166546)
chr4 (236-304)||(19927067-19927135)
chr4 (227-337)||(23975604-23975714)
chr4 (219-268)||(37741422-37741470)
chr4 (14-54)||(10106333-10106373)
chr4 (143-223)||(12836215-12836295)
chr4 (294-358)||(12836307-12836371)
chr4 (141-235)||(17108573-17108669)
chr4 (14-54)||(17711344-17711384)
[»] chr3 (37 HSPs)
chr3 (143-347)||(20886613-20886817)
chr3 (148-355)||(27853068-27853276)
chr3 (141-372)||(26092623-26092854)
chr3 (198-359)||(25530931-25531093)
chr3 (170-339)||(23054752-23054921)
chr3 (143-355)||(28326282-28326494)
chr3 (139-326)||(3114853-3115041)
chr3 (150-344)||(5270961-5271156)
chr3 (141-264)||(3002884-3003007)
chr3 (143-324)||(20891790-20891973)
chr3 (141-326)||(5509834-5510020)
chr3 (179-337)||(6075725-6075883)
chr3 (141-265)||(23637438-23637563)
chr3 (143-310)||(13906731-13906899)
chr3 (143-357)||(819993-820208)
chr3 (150-336)||(18735425-18735612)
chr3 (237-355)||(22470648-22470766)
chr3 (141-268)||(2166180-2166310)
chr3 (170-307)||(19912362-19912500)
chr3 (170-344)||(22246744-22246918)
chr3 (141-268)||(16242337-16242466)
chr3 (141-310)||(8145028-8145199)
chr3 (141-339)||(18466843-18467042)
chr3 (143-353)||(19387998-19388209)
chr3 (229-306)||(31284531-31284608)
chr3 (141-219)||(16223363-16223442)
chr3 (15-54)||(22470422-22470461)
chr3 (143-215)||(31284052-31284125)
chr3 (170-310)||(34276615-34276756)
chr3 (15-59)||(7805775-7805819)
chr3 (15-54)||(12771222-12771261)
chr3 (143-356)||(17134827-17135041)
chr3 (149-259)||(15669439-15669549)
chr3 (216-304)||(6292146-6292234)
chr3 (145-220)||(7208393-7208469)
chr3 (219-279)||(11636200-11636259)
chr3 (141-235)||(27073807-27073903)
[»] chr8 (43 HSPs)
chr8 (143-346)||(24380501-24380705)
chr8 (143-364)||(24381474-24381696)
chr8 (143-355)||(15058652-15058863)
chr8 (141-339)||(22501586-22501785)
chr8 (141-326)||(14271606-14271792)
chr8 (141-310)||(15176578-15176748)
chr8 (149-347)||(14076866-14077065)
chr8 (143-357)||(24518735-24518950)
chr8 (143-268)||(30487669-30487794)
chr8 (161-266)||(35861628-35861733)
chr8 (148-303)||(20268177-20268333)
chr8 (148-303)||(21054806-21054962)
chr8 (143-358)||(24851093-24851297)
chr8 (149-346)||(30117812-30118008)
chr8 (147-344)||(17980540-17980738)
chr8 (141-268)||(24389579-24389707)
chr8 (141-268)||(13833750-13833877)
chr8 (230-357)||(18836539-18836666)
chr8 (143-268)||(15557217-15557337)
chr8 (141-272)||(24388517-24388650)
chr8 (147-343)||(7984863-7985062)
chr8 (170-268)||(28858659-28858757)
chr8 (155-364)||(19784940-19785150)
chr8 (141-306)||(30832723-30832890)
chr8 (170-310)||(23868005-23868147)
chr8 (168-276)||(5856595-5856703)
chr8 (141-310)||(24520146-24520316)
chr8 (141-241)||(28904114-28904214)
chr8 (143-268)||(17835366-17835492)
chr8 (149-266)||(17976062-17976180)
chr8 (141-268)||(21230748-21230876)
chr8 (147-306)||(18007328-18007481)
chr8 (227-306)||(34499074-34499153)
chr8 (141-210)||(17649683-17649752)
chr8 (170-274)||(18822407-18822512)
chr8 (15-59)||(13833623-13833667)
chr8 (141-235)||(18447007-18447103)
chr8 (141-215)||(21316659-21316734)
chr8 (14-59)||(15557400-15557445)
chr8 (285-358)||(17973486-17973559)
chr8 (215-311)||(13313469-13313565)
chr8 (14-54)||(17510942-17510982)
chr8 (149-209)||(24091032-24091092)
[»] chr2 (55 HSPs)
chr2 (143-358)||(27420805-27421020)
chr2 (155-330)||(26651796-26651971)
chr2 (141-355)||(34369063-34369277)
chr2 (141-357)||(32438827-32439043)
chr2 (141-347)||(27871039-27871235)
chr2 (170-364)||(17891457-17891652)
chr2 (158-272)||(8501674-8501788)
chr2 (150-364)||(22627113-22627326)
chr2 (143-268)||(29717504-29717629)
chr2 (143-249)||(32141540-32141646)
chr2 (141-304)||(27907668-27907833)
chr2 (148-303)||(16042814-16042969)
chr2 (148-318)||(28930046-28930218)
chr2 (155-266)||(34579933-34580046)
chr2 (155-266)||(34585682-34585795)
chr2 (149-344)||(45572520-45572717)
chr2 (149-344)||(45576187-45576384)
chr2 (149-344)||(45579854-45580051)
chr2 (149-344)||(45583521-45583718)
chr2 (149-344)||(45587188-45587385)
chr2 (149-344)||(45590855-45591052)
chr2 (149-344)||(45594522-45594719)
chr2 (149-344)||(45598189-45598386)
chr2 (149-344)||(45601856-45602053)
chr2 (149-344)||(45605523-45605720)
chr2 (149-344)||(45609190-45609387)
chr2 (149-344)||(45612857-45613054)
chr2 (149-344)||(45616524-45616721)
chr2 (141-302)||(18758089-18758252)
chr2 (141-310)||(21905506-21905679)
chr2 (141-263)||(22568880-22569005)
chr2 (14-59)||(16157103-16157148)
chr2 (141-268)||(29144456-29144585)
chr2 (141-235)||(25532091-25532187)
chr2 (238-357)||(16157318-16157437)
chr2 (149-220)||(25938400-25938471)
chr2 (138-267)||(27540408-27540539)
chr2 (170-220)||(8445649-8445699)
chr2 (236-318)||(11464557-11464639)
chr2 (146-343)||(24346218-24346415)
chr2 (287-340)||(25883634-25883687)
chr2 (145-202)||(30682353-30682410)
chr2 (141-235)||(25537411-25537507)
chr2 (14-54)||(27907541-27907581)
chr2 (251-319)||(30682448-30682516)
chr2 (252-324)||(32086794-32086866)
chr2 (15-54)||(21905764-21905803)
chr2 (219-310)||(22378054-22378145)
chr2 (15-54)||(28918226-28918265)
chr2 (141-203)||(17199415-17199477)
chr2 (143-228)||(18970921-18971006)
chr2 (141-272)||(25886337-25886470)
chr2 (252-309)||(25938331-25938388)
chr2 (238-307)||(28766647-28766716)
chr2 (141-235)||(17350833-17350929)
[»] scaffold0072 (2 HSPs)
scaffold0072 (141-362)||(38020-38241)
scaffold0072 (16-63)||(38320-38367)
[»] scaffold0002 (1 HSPs)
scaffold0002 (170-315)||(95399-95545)
[»] scaffold0024 (1 HSPs)
scaffold0024 (157-355)||(41074-41274)
[»] scaffold0451 (1 HSPs)
scaffold0451 (153-339)||(10249-10437)
[»] scaffold0043 (1 HSPs)
scaffold0043 (172-343)||(88614-88785)
[»] scaffold0637 (1 HSPs)
scaffold0637 (137-364)||(7109-7340)
[»] scaffold0015 (1 HSPs)
scaffold0015 (172-326)||(202010-202164)
[»] scaffold0005 (1 HSPs)
scaffold0005 (143-303)||(243978-244140)
[»] scaffold1017 (1 HSPs)
scaffold1017 (207-339)||(351-483)
[»] scaffold0085 (1 HSPs)
scaffold0085 (238-344)||(23749-23855)
[»] scaffold0441 (1 HSPs)
scaffold0441 (158-268)||(2128-2240)
[»] scaffold0094 (2 HSPs)
scaffold0094 (167-264)||(12058-12155)
scaffold0094 (262-339)||(6201-6278)
[»] scaffold0032 (1 HSPs)
scaffold0032 (141-307)||(92974-93141)
[»] scaffold1339 (1 HSPs)
scaffold1339 (289-345)||(1033-1089)
[»] scaffold0019 (1 HSPs)
scaffold0019 (287-355)||(27882-27950)
[»] scaffold0386 (1 HSPs)
scaffold0386 (143-343)||(13622-13823)
[»] scaffold0360 (1 HSPs)
scaffold0360 (168-268)||(16640-16740)
[»] scaffold0115 (1 HSPs)
scaffold0115 (294-355)||(36352-36413)
[»] scaffold0136 (1 HSPs)
scaffold0136 (207-355)||(14001-14148)
[»] scaffold0056 (1 HSPs)
scaffold0056 (141-235)||(22891-22987)


Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 137 - 415
Target Start/End: Complemental strand, 20176048 - 20175766
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagac 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20176048 ctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaatcggcaaagcaagacatctgaaaaattgtgaagac 20175949  T
Q  237 cttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaac 336  Q
     ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20175948 tttgggaagatcatgaatgaagattcaagaggcctcggaagacaatacaaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaac 20175849  T
Q  337 acctaaaaagatgaagaaacatacatttacgt----gcaagaaaacgcactagcacgccgagagcaaagccatgcaccccgag 415  Q
    ||||||||||||||||||||||||||||||||    ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20175848 acctaaaaagatgaagaaacatacatttacgtgcaggcaggaaaacacactagcacgccgagagcaaagccatgcaccccgag 20175766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 143 - 277
Target Start/End: Original strand, 5046982 - 5047116
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| ||||||| ||| |||||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||| |||||||||| |||||    
T  5046982 ttcccgaaacatagcaattttagagtgttttgatgtaattcacgaagaaatcatgcaaatcggcaaatcaagacatctgaaaatttgtgaagactttggg 5047081  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaag 277  Q
    |||||||  ||||||||||||||||| ||| ||||    
T  5047082 aagatcaataatgaagattcaagaggcctcagaag 5047116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 143 - 358
Target Start/End: Original strand, 15611187 - 15611402
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| ||||| | ||| |||||||| ||||||||| ||||||||  |||| |||||||||| |||||||||||||| |||||||| | |||||    
T  15611187 ttcccgaaacatagcaaatttagagtgttttgttgtaattcacgaagaaatcatgcatattggcaaagaaagacatctgaaaatttgtgaagtctttggg 15611286  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| |  |||| || ||||||||| ||   |||||  || | |||||| |||||||||||||| || |||||||| ||| || ||| |||||||| ||    
T  15611287 aagatgaataatgtaggttcaagaggcctaaaaagacgttacagagggagaaattatgttcccaaattccaagacatcttatatagaagcaaacacccaa 15611386  T
Q  343 aaagatgaagaaacat 358  Q
    |||| |||||||||||    
T  15611387 aaaggtgaagaaacat 15611402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 137 - 351
Target Start/End: Complemental strand, 9501967 - 9501752
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgttttgatgtaatt-catgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaaga 235  Q
    ||||| ||||||||||| ||||||| |||| ||||||| ||||| | || ||||||||  |||  || ||| |||||||||||||||| | ||||||||     
T  9501967 ctaatcttcccgaaacatagcaattttaggatgttttgttgtaaatgcacgaagaaatcatgcttatcggctaagcaagacatctgaagatttgtgaagt 9501868  T
Q  236 ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaa 335  Q
    |||||||||||| | |||||||||||||||||| |||  || |   || | |||||||||||||||| ||||||  |||||||| |||||| ||| ||||    
T  9501867 ccttgggaagataaagaatgaagattcaagaggcctcaaaatatgttacagagggaggaattatgtttccaagtgccaagacatcttacatagaagcaaa 9501768  T
Q  336 cacctaaaaagatgaa 351  Q
    ||||||||||| ||||    
T  9501767 cacctaaaaaggtgaa 9501752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 143 - 364
Target Start/End: Original strand, 2506959 - 2507180
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| || |||| |||||||||||||| ||||||| ||||||||  |||||||  |||||||||||||||| || | |||  ||||| |||||    
T  2506959 ttcccaaaacatagaaattttagggtgttttgatctaattcacgaagaaatcatgcaaatcagcaaagcaagacatcttaagacttgcaaagactttggg 2507058  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    |||||||   |||||||||||| ||| ||   |||||| || ||||||||| ||| |||||||| ||  |||||||||||| | |||| |||||||  ||    
T  2507059 aagatcaaatatgaagattcaataggccttcaaagacattacaaagggagggattttgttcccaggtcccaagacatattatacggaagcaaacactcaa 2507158  T
Q  343 aaagatgaagaaacatacattt 364  Q
    |||||| ||||||||| |||||    
T  2507159 aaagataaagaaacatgcattt 2507180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 10332355 - 10332227
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| | |||||||||| |||||| ||||||||||||||||||||  |||| || |||||| ||||||||||||| | | |||||||| ||    
T  10332355 ttttcccgaaacatatcaattctaggatgtttttgatgtaattcatgaagaaatcatgcatatcggcaaaacaagacatctgaagattagtgaagacttt 10332256  T
Q  240 gggaagatcatgaatgaagattcaagagg 268  Q
    |||||||||| ||||||||||||||||||    
T  10332255 gggaagatcaagaatgaagattcaagagg 10332227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 355
Target Start/End: Original strand, 24751360 - 24751559
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    |||||||||||||||||||||||||||| |||||||   ||||||| | |||||||| |||| |||| | || ||||||  |||||||||  ||||||||    
T  24751360 caattctagggtgttttgatgtaattcacgaagaaaccatgcaaatcgacaaagcaaaacatttgaagacttttgaagattttgggaagacaatgaatga 24751459  T
Q  257 agattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatgg-aaacaaacacctaaaaagatgaagaaa 355  Q
    |||||||||||| ||| ||||||| || |||||||| |||| ||||||||| || ||| |||| | |  ||| ||| ||||||| |||| ||||||||||    
T  24751460 agattcaagaggcctcagaagacattacaaagggagaaattttgttcccaatttccaaaacatctaatgtggaaaaaaaacacccaaaaggatgaagaaa 24751559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 25692740 - 25692569
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| |  |||| |||| |||||| ||  ||||||| ||||||||  | |||||||||||| ||||| |||||||| ||||||||| || |    
T  25692740 ttttcccgaaacataataattttaggatgtttttgaaataattcaagaagaaatcattcaaattggcaaatcaagaacatctgaagaattgtgaatactt 25692641  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||||||||  ||||||||||||||||| ||| ||||||  || || |||||||||||||||||||||||    
T  25692640 tgggaagatcaaaaatgaagattcaagaggcctcagaagactttacaatgggaggaattatgttcccaagtt 25692569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 1254842 - 1254960
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||| |||||| ||||||| |||||||||||||||||||||| ||||||||   |||||| | ||||||||||||| |||| | |||| ||||| |||    
T  1254842 ttttcctgaaacatagcaattatagggtgttttgatgtaattcacgaagaaatcaagcaaatcgacaaagcaagacatttgaagacttgtcaagactttg 1254941  T
Q  241 ggaagatcatgaatgaaga 259  Q
    |||||||||||||||||||    
T  1254942 ggaagatcatgaatgaaga 1254960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 158 - 355
Target Start/End: Original strand, 15170926 - 15171124
Alignment:
Q  158 aattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    |||| |||| ||||||| |||||||||| ||||||||  || |||| |||||||||||||| | ||| | || |   | |||||||||||| | ||||||    
T  15170926 aattttaggatgttttggatgtaattcacgaagaaatcatgtaaatcggcaaagcaagacaaccgaagatttatttggtccttgggaagatgaagaatga 15171025  T
Q  257 agattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    |||||||||||| ||| ||||||  || ||||||||||||| |||||| ||||| |||||||| |||||| ||  |||||||||||||||  |||||||    
T  15171026 agattcaagaggcctcagaagactttacaaagggaggaattttgttcctaagttccaagacatcttacatagaggcaaacacctaaaaaggcgaagaaa 15171124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 13281882 - 13282053
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagat 247  Q
    ||||| |||||||||| |||||| | | |||||||| ||||| ||  |||||||  ||||||||| |||||| ||| | ||||||||| |||||||| |     
T  13281882 aaacatagcaattctacggtgttctcacgtaattcaagaagatatcatgcaaatcagcaaagcaaaacatcttgaatacttgtgaagatcttgggaaaac 13281981  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    ||||||||||||||||||||| |||  |||| | || ||||||||||||| |||||||||||  ||||||||    
T  13281982 catgaatgaagattcaagaggcctcaaaagatattacaaagggaggaattttgttcccaagtcccaagacat 13282053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 143 - 364
Target Start/End: Complemental strand, 5485574 - 5485353
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    |||| |||||| | ||||| |||| ||||||| ||||| |||| |||||||   |||| || ||| |||||||||||||||| | |||||||| ||||||    
T  5485574 ttcctgaaacatatcaattttaggatgttttgttgtaaattcacgaagaaaacatgcatatcggcgaagcaagacatctgaagatttgtgaagtccttgg 5485475  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
     ||||| | ||||||||||| ||  ||||||  |||||  || | ||||| ||||| | |||||||||| |||||||| |||||||||| ||||||||      
T  5485474 aaagatgaagaatgaagatttaaatggtctcaaaagacgttacagagggaagaattttattcccaagttccaagacatcttacatggaagcaaacacc-c 5485376  T
Q  342 aaaagatgaagaaacatacattt 364  Q
    |||||| |||||||||| |||||    
T  5485375 aaaagacgaagaaacatgcattt 5485353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 20176171 - 20176113
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttttcatctagagtagcagag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20176171 attattcttagcatgttttccagtcattttcagtatgtttttcatctagagtagcagag 20176113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 370
Target Start/End: Original strand, 4900477 - 4900696
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||| ||||| ||||||| |||||||||||||  |||||   ||||||||  ||||||||| ||||||||||          ||| ||||||| |||    
T  4900477 ttttccctaaacatagcaattatagggtgttttgacctaattaccgaagaaatcatgcaaattgacaaagcaaga----------attttgaagactttg 4900566  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||||||||| ||||||||||||| | ||| |||||||||| ||| |||  ||||  ||||||||||  ||| ||||  || | |||| ||||||||     
T  4900567 ggaagatcatgattgaagattcaagaagcctcagaagacaatacaaaaggaaaaatttggttcccaagtcccaatacatcgtatacggaagcaaacaccc 4900666  T
Q  341 aaaaagatgaagaaacatacatttacgtgc 370  Q
    ||||||| |||||||||  |||||||||||    
T  4900667 aaaaagacgaagaaacaagcatttacgtgc 4900696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 364
Target Start/End: Original strand, 6039473 - 6039667
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    ||||||||||||||| ||| || |  |||| || ||||||| || |||||  || | |||||||| |||||||||||| | ||||||||||||||||||     
T  6039473 ttttgatgtaattcacgaaaaactcatgcatatcggcaaagtaatacatccaaagatttgtgaagtccttgggaagataaagaatgaagattcaagaggc 6039572  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattt 364  Q
    |||  || ||  || | ||||| ||| ||||||||| ||||  ||||||| |||||| ||||||||||||| || || ||||||||||| |||||    
T  6039573 ctcataataccttacagagggacgaactatgttcccgagttctaagacatcttacattgaaacaaacaccttaacaggtgaagaaacatgcattt 6039667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 355
Target Start/End: Complemental strand, 10418506 - 10418292
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| || |||| |||| ||||||  |||||||||| ||||||||  ||||||| |||||||||||||||| ||| | || ||  | |||| |    
T  10418506 ttcccgaaacatagaaattttaggatgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacatccgaagatttatgtggtcctttg 10418407  T
Q  242 gaa-gatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||| ||| | || | ||||||||||||  ||| ||||||  || ||| |||| ||||||||||||||||| |||||||| |||||  ||| ||||||| |    
T  10418406 gaaagatgaagattcaagattcaagagacctcagaagactttacaaaaggagaaattatgttcccaagttccaagacatcttacactgaagcaaacactt 10418307  T
Q  341 aaaaagatgaagaaa 355  Q
    ||||||| |||||||    
T  10418306 aaaaagacgaagaaa 10418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 147 - 339
Target Start/End: Original strand, 5221120 - 5221313
Alignment:
Q  147 cgaaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaag 245  Q
    ||||||| ||||||| |||| ||||||| ||||| |||| ||||||||  |||| || |||||||||||||||||||| | ||||||||||||||| |||    
T  5221120 cgaaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatgcatatcggcaaagcaagacatctgaagatttgtgaagaccttggaaag 5221219  T
Q  246 atcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    ||   ||||||||||||||||    ||  |||||  || ||| ||||||||| |||||||||||| || | ||  |||||| ||| ||||||||    
T  5221220 atgtagaatgaagattcaagaaaattcataagacgttacaaatggaggaattctgttcccaagttccaggtcactttacatagaagcaaacacc 5221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 21502803 - 21502678
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||||||||||||||| || |||||||| ||||||||  ||||||| | |||||||||| |||| ||| | | | ||||||||||    
T  21502803 ttcccgaaacatagcaattctagggtgtttttgaggtaattcacgaagaaatcatgcaaatcgacaaagcaagaacatccgaagattagcgaagaccttg 21502704  T
Q  241 ggaagatcatgaatgaagattcaaga 266  Q
    ||||||||| ||||||| ||||||||    
T  21502703 ggaagatcaagaatgaacattcaaga 21502678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 5471891 - 5472056
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatca-tgaa 253  Q
    ||||||| |||||| |||| | |||||||| ||||||||  ||||||| |||||||||| ||| ||||| | ||||||||||||||| || || |  |||    
T  5471891 agcaattttagggtcttttaaagtaattcaagaagaaatcatgcaaatcggcaaagcaatacacctgaagatttgtgaagaccttggaaaaatgagagaa 5471990  T
Q  254 tgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    ||||||||||||| |   |  |||||| || |||||||||||||||||||| ||||| ||| ||||    
T  5471991 tgaagattcaagatgctccataagacattacaaagggaggaattatgttccaaagttccaaaacat 5472056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 341
Target Start/End: Complemental strand, 1589188 - 1588987
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt--ggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||| | ||||||| ||||||||| ||||||||||||| ||||||||   ||||||   || |||| ||||||||  || | || ||  | ||||    
T  1589188 ttcccgaaatatagcaattttagggtgttcttgatgtaattcacgaagaaatcaagcaaatcagggaaaagtaagacatccaaagatttatgtggtcctt 1589089  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||| | |||||||||||||| | | ||| ||||||  || | | |||||||||||||||||||||| |||||||| |||||| |||  |||||||    
T  1589088 gggaagatgaagaatgaagattcaacatgcctcagaagactttacagaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaacacc 1588989  T
Q  340 ta 341  Q
    ||    
T  1588988 ta 1588987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 10585428 - 10585510
Alignment:
Q  236 ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagaca 318  Q
    |||||||||||| | |||||||||||||| ||||||| ||||||  || ||||||||||||| |||||| |||||||||||||    
T  10585428 ccttgggaagatgaagaatgaagattcaaaaggtctcagaagactttacaaagggaggaattttgttcctaagtttcaagaca 10585510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 3585751 - 3585836
Alignment:
Q  221 gaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    ||||| |||||||||| |||||||||  | |||||||||||||||||||||| ||||||  || || |||||||||||||||||||    
T  3585751 gaaaatttgtgaagactttgggaagaataagaatgaagattcaagaggtctcagaagactttacaatgggaggaattatgttccca 3585836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 153 - 340
Target Start/End: Complemental strand, 3736278 - 3736089
Alignment:
Q  153 acagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcat 250  Q
    ||||||||| ||||||||| |||||||||||||  |||||||    |||||  |||||||||||||||| ||| | || ||  | |||| ||||||| |     
T  3736278 acagcaattttagggtgttattgatgtaattcacaaagaaatcaatcaaatcaggcaaagcaagacatccgaagatttatgtggtccttaggaagatgaa 3736179  T
Q  251 gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||||||||||||||| ||| | |||| ||| | ||||||||||| ||||| ||| || |||||||| |||||| |||  ||||||||    
T  3736178 gaatgaagattcaagaggcctcaggagactatacagagggaggaattctgttctcaatttccaagacatcttacattgaagaaaacacct 3736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 349
Target Start/End: Complemental strand, 9288831 - 9288652
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||  ||||||||  ||||||| | ||||| |||| |||||||| | |||||||||||||| |||||||| |||||||| |||||||||    
T  9288831 ttttgatgtaattcgcgaagaaatcatgcaaatcgtcaaagtaagaacatctgaagatttgtgaagaccttgagaagatcaagaatgaaggttcaagagg 9288732  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatg 349  Q
     |||  |||||  || | |||||  | || ||||||| || | |||||||| ||| |||||| |||||||| |||| ||||    
T  9288731 cctcataagactttacagagggataagttttgttccc-aggtccaagacatcttatatggaagcaaacacccaaaaggatg 9288652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 8052574 - 8052700
Alignment:
Q  141 ttttcccgaaacacagcaattctagggt--gttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacc 237  Q
    ||||||||||||| ||||||| |||||   ||||||| |||||||| ||||||||  ||||||| | |||| ||||| |||||||| |||||| |||||     
T  8052574 ttttcccgaaacatagcaattttaggggaggttttgaagtaattcacgaagaaatcatgcaaatcgacaaatcaagaacatctgaagaattgtcaagact 8052673  T
Q  238 ttgggaagatcatgaatgaagattcaa 264  Q
    ||||||||| ||  |||||||||||||    
T  8052674 ttgggaagaccaaaaatgaagattcaa 8052700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 170 - 357
Target Start/End: Complemental strand, 21234024 - 21233837
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    ||||||||||| ||| | ||||||  |||| || || ||||||||||||  ||| | || ||||| |||||  ||||| | |||||||||||||||||||    
T  21234024 ttttgatgtaactcacggagaaatcatgcatatcggaaaagcaagacattcgaagatttttgaagtccttgaaaagatgaagaatgaagattcaagaggt 21233925  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaaca 357  Q
    ||   |||||  || |||| ||||| ||||||||| ||||| |||||||| || ||| ||| ||||||||| | |||  |||||||||    
T  21233924 cttaaaagactttacaaagcgaggagttatgttcctaagttccaagacatcttgcatagaagcaaacaccttagaaggcgaagaaaca 21233837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 346
Target Start/End: Complemental strand, 144926 - 144720
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaa-gacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||| |||| ||||||  |||||||||| ||| ||||  ||||||| |||||| ||| |||||| ||| | |  ||  | |||||    
T  144926 ttcccgaaacatagcaattgtaggatgttttttatgtaattcacgaacaaatcatgcaaatcggcaaaacaaagacatccgaagattcatgtggtccttg 144827  T
Q  241 ggaagatcatgaatgaagattcaagaggtc-tcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    | ||||| | ||| |||||||||||| | | |||||||||  |  ||| |||||||||||||||||||||| |||||||  |||||| ||| |||| |||    
T  144826 gtaagatgaagaaagaagattcaagaagacctcggaagacttttcaaatggaggaattatgttcccaagttccaagacaatttacatagaagcaaatacc 144727  T
Q  340 taaaaag 346  Q
    |||||||    
T  144726 taaaaag 144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 363
Target Start/End: Complemental strand, 2455293 - 2455070
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacat-ctgaaaaattgtgaagacctt 239  Q
    ||||| ||||||| |||||||||||| ||||| ||||||||| | ||||||||   |||||| |||||||||| |||| || || | ||||||||| | |    
T  2455293 ttttcgcgaaacaaagcaattctagg-tgttt-gatgtaatttaagaagaaatcacgcaaatcggcaaagcaaaacattctaaatatttgtgaagatcat 2455196  T
Q  240 gggaagatcat--gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    ||||||| |||  |||||||||||||||| | |||| |||| | ||  |||  | ||||||||||| |||||  |||||||  ||| ||| ||  |||||    
T  2455195 gggaagaccatatgaatgaagattcaagatgcctcgaaagatattaccaagaaatgaattatgttctcaagtcccaagacaacttatatgaaagtaaaca 2455096  T
Q  338 cctaaaaagatgaagaaacatacatt 363  Q
    || ||||||| |||||||||| ||||    
T  2455095 cccaaaaagacgaagaaacatgcatt 2455070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 309
Target Start/End: Complemental strand, 2505794 - 2505625
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| || |||||||||||||||||||| ||||||||  ||||||| | ||||| || ||||| |||||| |||||||||  |    
T  2505794 ttttcccgaaacatagcaattttaagggtgttttgatgtaattcaagaagaaatcatgcaaatcgtcaaagaaaaacatcttgaaaacttgtgaaga-tt 2505696  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagt 309  Q
    |||||| |  ||||||||||||  |||| | |||| |||||| || ||| |||  |||| || ||||||||    
T  2505695 tgggaatacaatgaatgaagatataagaagcctcgaaagacattagaaaaggaaaaattttgctcccaagt 2505625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 9767634 - 9767520
Alignment:
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||| | ||||||||||||||||||  || ||||||  || |  ||||||||||||||||| ||||| |||||||| |||||  |||  ||||||||    
T  9767634 ggaagatgaagaatgaagattcaagaggcatcagaagactttacagggggaggaattatgttcctaagttccaagacatcttacaatgaacaaaacacct 9767535  T
Q  341 aaaaagatgaagaaa 355  Q
    |||||| ||||||||    
T  9767534 aaaaaggtgaagaaa 9767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 9134759 - 9134626
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| |||| | || |||| |||||||| ||||||||  || |||| |||||| ||||| |||| ||| | |||||||||| |    
T  9134759 ttttcccgaaacatagcaattttaggattttattgaagtaattcacgaagaaatcatgtaaatcggcaaatcaagaacatccgaagatttgtgaagactt 9134660  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctc 272  Q
    ||||| || || |||| |||||||||||||||||    
T  9134659 tgggacgaccaagaataaagattcaagaggtctc 9134626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 26249229 - 26249350
Alignment:
Q  149 aaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||| ||||||| ||||| ||||| || |||||||| ||||||||  ||||||| |||||| ||| | |||| ||| | |||||||||| |||||||||    
T  26249229 aaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaaatcatccgaagatttgtgaagactttgggaaga 26249328  T
Q  247 tcatgaatgaagattcaagagg 268  Q
     || ||||||||||||||||||    
T  26249329 ccaagaatgaagattcaagagg 26249350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 324
Target Start/End: Original strand, 8309947 - 8310067
Alignment:
Q  204 ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    |||||||||||||||| ||| | || ||  |||||||||||||| | |||||||||||||||||| |||  |||||  || | ||| ||||||| |||||    
T  8309947 ggcaaagcaagacatccgaagatttatgtggaccttgggaagatgaagaatgaagattcaagaggcctcataagactttagagaggaaggaattctgttc 8310046  T
Q  304 ccaagtttcaagacatattac 324  Q
    ||| ||| |||||||| ||||    
T  8310047 ccatgttccaagacattttac 8310067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 19154788 - 19154588
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattt-tgcaaattggcaaagcaagacatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| ||| ||| |  ||||||||||||||| ||||||||  || | || ||  | |||    
T  19154788 ttttcccgaaacataggaattatagggtgttcttgatgtaattcacgaaaaaaatcatgcaaattggcaaagtaagacatccaaagatttatgtggtcct 19154689  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacac 338  Q
    ||||||||  | || | ||||||||| ||| ||| ||||||| || | | |||| |||| ||||||||||||  ||||||| |||||| |||  ||||||    
T  19154688 tgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaacac 19154589  T
Q  339 c 339  Q
    |    
T  19154588 c 19154588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 20754187 - 20753987
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattt-tgcaaattggcaaagcaagacatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| ||| ||| |  ||||||||||||||| ||||||||  || | || ||  | |||    
T  20754187 ttttcccgaaacataggaattatagggtgttcttgatgtaattcacgaaaaaaatcatgcaaattggcaaagtaagacatccaaagatttatgtggtcct 20754088  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacac 338  Q
    ||||||||  | || | ||||||||| ||| ||| ||||||| || | | |||| |||| ||||||||||||  ||||||| |||||| |||  ||||||    
T  20754087 tgggaagacgaagatttaagattcaaaaggcctcagaagacattacagaaggagaaattctgttcccaagttctaagacatcttacattgaagaaaacac 20753988  T
Q  339 c 339  Q
    |    
T  20753987 c 20753987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 9298623 - 9298524
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||  ||||||||  ||||||| | ||||| |||| |||||||| | | |||||||||||| |||||||| |||||||| |||||||||    
T  9298623 ttttgatgtaattcgcgaagaaatcatgcaaatcgtcaaagtaagaacatctgaagattagtgaagaccttgagaagatcaagaatgaaggttcaagagg 9298524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 9918072 - 9917953
Alignment:
Q  186 gaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc-atgaatgaagattcaagaggtctcggaagacaatat 284  Q
    ||||||||  ||||||  ||||||||||||||| |||| | |||||||||  ||||||||||| | |||||||||||||||||| |||  |||||| ||     
T  9918072 gaagaaatcatgcaaaccggcaaagcaagacatttgaagatttgtgaagattttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattac 9917973  T
Q  285 aaagggaggaattatgttcc 304  Q
    | |||||| |||| ||||||    
T  9917972 atagggagaaattttgttcc 9917953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 9925984 - 9925865
Alignment:
Q  186 gaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc-atgaatgaagattcaagaggtctcggaagacaatat 284  Q
    ||||||||  ||||||  ||||||||||||||| |||| | |||||||||  ||||||||||| | |||||||||||||||||| |||  |||||| ||     
T  9925984 gaagaaatcatgcaaaccggcaaagcaagacatttgaagatttgtgaagattttgggaagatcaaagaatgaagattcaagaggcctcaaaagacattac 9925885  T
Q  285 aaagggaggaattatgttcc 304  Q
    | |||||| |||| ||||||    
T  9925884 atagggagaaattttgttcc 9925865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 10991127 - 10991193
Alignment:
Q  158 aattctagggtgttttgatgtaattcatgaagaaat-tttgcaaattggcaaagcaagacatctgaa 223  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||| |||| ||||    
T  10991127 aattctagggtgttttgatgtaatttaagaagaaatctttgcaaatcggcaaagcaaaacatttgaa 10991193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 8038969 - 8038917
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaat 193  Q
    |||||| |||||| ||||||||||||||||||||||||||||||  |||||||    
T  8038969 ttttcctgaaacatagcaattctagggtgttttgatgtaattcaaaaagaaat 8038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 1585997 - 1585958
Alignment:
Q  287 agggaggaattatgttcccaagtttcaagacatattacat 326  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  1585997 agggaggaattatgttcccaagtttcaagacatcttacat 1585958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 4450748 - 4450709
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  4450748 ttattcttagcatgttttccagtcattttcagtaggtttt 4450709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 10332481 - 10332442
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10332481 ttattcttagcatgtttttcagtcattttcagtatgtttt 10332442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9722393 - 9722299
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggga 243  Q
    ||||| ||||||| ||||||||||||||||||| ||  |||||||  ||||||| | |||||| |||||||| || | ||||||| || ||||||    
T  9722393 aaacatagcaattatagggtgttttgatgtaatccacaaagaaatcatgcaaatcgacaaagctagacatctaaagacttgtgaatactttggga 9722299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 316
Target Start/End: Complemental strand, 6018309 - 6018132
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagacct 238  Q
    ||||||| ||||| | ||||| |||||| |||| ||||||||||| ||||||||   ||||||  ||||||| ||||||| |||| | || ||  | |||    
T  6018309 ttttcccaaaacataacaattttagggtatttttgatgtaattcacgaagaaatcaagcaaatcaggcaaagtaagacatttgaagatttatgtggtcct 6018210  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaaga 316  Q
    | |||| || | ||||||||| |||||||| |||  ||||| ||||| ||||| |||||  ||||||||||| |||||    
T  6018209 taggaaaatgaagaatgaagagtcaagaggcctcaaaagactatatagagggaagaattcagttcccaagttccaaga 6018132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 305
Target Start/End: Original strand, 39270454 - 39270583
Alignment:
Q  177 gtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcgga 275  Q
    |||||||| |||||||   ||||||| |||||| ||||| ||||   | |||||| ||||| ||| ||||| || |||||||||||||||||| |||||     
T  39270454 gtaattcacgaagaaaccatgcaaatcggcaaatcaagaacatccagagaattgtcaagactttgagaagaccaagaatgaagattcaagaggcctcggg 39270553  T
Q  276 agacaatataaagggaggaattatgttccc 305  Q
    ||||  || | ||||||| |||||||||||    
T  39270554 agactttacatagggaggtattatgttccc 39270583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 6046478 - 6046308
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg-tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||||||||||||   ||||| ||||| | |||||| |||||||| ||||||||  ||||||| | |||| ||||| || || || |||||||||||| |    
T  6046478 ttttcccgaaacatgacaattttaggggttttttgaagtaattcacgaagaaatcatgcaaatcgacaaatcaagaacaactaaagaattgtgaagac-t 6046380  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataa-agggaggaattatgttcccaagtt 310  Q
    |||||||| || | ||||||||| |||||| ||| | ||||  ||||| ||||| ||||||||||||| ||||    
T  6046379 tgggaagaccaaggatgaagattaaagaggcctcaggagact-tataagagggaagaattatgttccctagtt 6046308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 11804649 - 11804525
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| ||||||| | |||  |||||| | |||||| ||||||||  ||||||| | |||| |||| ||| ||||| |||| | ||||| ||    
T  11804649 ttttcccgaaacatagcaattttgggggtttttgaagaaattcacgaagaaatcatgcaaatcgacaaatcaagaacaactgaagaattttcaagacttt 11804550  T
Q  240 gggaagatcatgaatgaagattcaa 264  Q
    |||||||  | ||||||||||||||    
T  11804549 gggaagacaaagaatgaagattcaa 11804525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 304
Target Start/End: Complemental strand, 17831100 - 17831029
Alignment:
Q  233 agaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcc 304  Q
    |||| |||||||||||| ||||||||||||||||||  || ||||||  || | ||||||||||| ||||||    
T  17831100 agacattgggaagatcaagaatgaagattcaagaggcttcagaagactttacagagggaggaattctgttcc 17831029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 23128042 - 23128093
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaat 193  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  23128042 ttcccgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaat 23128093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 2565982 - 2565944
Alignment:
Q  16 tattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  2565982 tattcttagcatgtttttcagtcattttcagtaggtttt 2565944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 3189548 - 3189670
Alignment:
Q  204 ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    |||||||||||||||| ||| | || ||  | |||| ||||||| | || ||||   |||||||||||  ||||||  || | ||||| |||||||||||    
T  3189548 ggcaaagcaagacatccgaagatttatgtggtccttcggaagatgaagagtgaaaggtcaagaggtcttagaagactttacagagggatgaattatgttc 3189647  T
Q  304 ccaagtttcaagacatattacat 326  Q
    ||||||| |||||||| ||||||    
T  3189648 ccaagttccaagacatcttacat 3189670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 4450622 - 4450493
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaatt-catgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacc 237  Q
    ||||||| ||||| ||||||| ||||| ||||| |||||| || || ||||||||  ||||||| | |||| ||||| || ||||| |||||| |||||     
T  4450622 ttttcccaaaacatagcaattttagggggtttttgatgtagtttcacgaagaaatcatgcaaatcgacaaatcaagaacaactgaagaattgtcaagact 4450523  T
Q  238 ttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||| ||  |||||||||||||||||    
T  4450522 ttgggaaga-caaaaatgaagattcaagagg 4450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 272
Target Start/End: Complemental strand, 10611664 - 10611530
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg-tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaa-gacc 237  Q
    ||||||| ||||| ||||||| ||||| | |||||| ||||| || ||| ||||| ||||||| |||||  ||||| ||||| || |||||| || |||     
T  10611664 ttttccctaaacatagcaattttaggggttttttgaagtaatccacgaaaaaattatgcaaatcggcaattcaagaacatctaaagaattgtcaaagact 10611565  T
Q  238 ttgggaagatcatgaatgaagattcaagaggtctc 272  Q
    |||||||||  | |||| |||||||||||||||||    
T  10611564 ttgggaagactaagaataaagattcaagaggtctc 10611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 20577453 - 20577359
Alignment:
Q  143 ttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaaga 235  Q
    ||||||||||| |||||||  |||| | |||||| |||||||| ||||||||  ||||||| |||||| ||| | |||||||| |||||||||||    
T  20577453 ttcccgaaacatagcaatttgaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaaagcatctgaagaattgtgaaga 20577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3585541 - 3585581
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  3585541 attattcttagcatgtttttcaatcattttcagtaggtttt 3585581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 9079028 - 9079124
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| || | |  |||||| |||||||| ||||||||  ||||||| |||| | |||| ||||||||| |||||||||||    
T  9079028 ttttcccgaaacatagcaattatatgaggtttttgaagtaattcacgaagaaatcatgcaaatcggcatatcaagaacatctgaagaattgtgaaga 9079124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 10414439 - 10414507
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaa 223  Q
    ||||||||||| |||||||||| ||||||| ||||||||  ||||||| | |||| ||| |||| ||||    
T  10414439 agcaattctagagtgttttgatataattcaagaagaaatcatgcaaatcgacaaaacaaaacatttgaa 10414507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 23897093 - 23897013
Alignment:
Q  260 ttcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||||| |||  |||||  |||||||||||||||| |||||||||||| ||| | || |||||| |||  ||||||||    
T  23897093 ttcaagaggcctcaaaagactttataaagggaggaattctgttcccaagttccaaaatatcttacattgaagaaaacacct 23897013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 6e-57; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 141 - 365
Target Start/End: Complemental strand, 32759919 - 32759695
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||| ||||||||  ||||||| ||||| | |||||||||||| | ||||||||||||||    
T  32759919 ttttcccaaaacatagcaattctaggatgttttgatgtaattcacgaagaaatcatgcaaatcggcaatgtaagacatctgaagacttgtgaagaccttg 32759820  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||||||||| ||||||||||||||| ||||||||||  || ||||||||||||| |||||||| ||  |||||||| ||| |||||| ||||||||     
T  32759819 ggaagatcatgagtgaagattcaagaggcctcggaagacgttacaaagggaggaattttgttcccaggtcccaagacatcttatatggaagcaaacaccc 32759720  T
Q  341 aaaaagatgaagaaacatacattta 365  Q
    || || | |||||||||| ||||||    
T  32759719 aagaaaacgaagaaacatgcattta 32759695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 149 - 366
Target Start/End: Complemental strand, 10822178 - 10821962
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc 248  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||  ||||||| |||||||||||||||  ||| |  ||||||||  || | ||||||    
T  10822178 aaacatagcaattctagggtgttttgatgtaatt-acgaagaaatcatgcaaatcggcaaagcaagacatacgaagacatgtgaagaattttgaaagatc 10822080  T
Q  249 atgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagat 348  Q
    |||||||||||||||| ||| |||  |||||| || ||||| |||||||||||||||||||  |||||||| ||| |||||| |||||| | |||||||     
T  10822079 atgaatgaagattcaaaaggcctcaaaagacattacaaaggaaggaattatgttcccaagtcccaagacatcttatatggaagcaaacatcgaaaaagac 10821980  T
Q  349 gaagaaacatacatttac 366  Q
    || ||||||| |||||||    
T  10821979 gatgaaacatgcatttac 10821962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 143 - 357
Target Start/End: Complemental strand, 30356211 - 30355997
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| | |||||||||| ||||||||||||||||| | ||||||  ||||||| ||||||||||||||| |||| | || ||||||| |||||    
T  30356211 ttcccgaaacatatcaattctaggatgttttgatgtaattcacggagaaatcatgcaaatcggcaaagcaagacatatgaatacttatgaagactttggg 30356112  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||||| |||||||||||||||| | ||| ||||| | || | |||||| | |||| ||| || ||  |||| ||| ||| |||||| |||||||| ||    
T  30356111 aagatcaagaatgaagattcaagaagcctcagaagatattacagagggagaacttatattctcatgtcccaaggcatcttatatggaagcaaacacccaa 30356012  T
Q  343 aaagatgaagaaaca 357  Q
    ||||| |||||||||    
T  30356011 aaagacgaagaaaca 30355997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 155 - 343
Target Start/End: Original strand, 21060564 - 21060752
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaat 254  Q
    ||||||| || ||||||||||||||||||| ||||||||  || ||||||| ||||||||||||||||| | | |||||||| ||||  |||||| ||||    
T  21060564 agcaattttacggtgttttgatgtaattcaagaagaaatcatgtaaattgggaaagcaagacatctgaagattagtgaagactttggagagatcaagaat 21060663  T
Q  255 gaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaa 343  Q
    |||||||||||||| ||| |||||   || | | |||| |||||| ||||||||   |||||||| ||| |||||| ||||||||||||    
T  21060664 gaagattcaagaggcctcagaagatgttacagaaggagaaattattttcccaagggccaagacatcttatatggaagcaaacacctaaa 21060752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 146 - 303
Target Start/End: Original strand, 9339129 - 9339286
Alignment:
Q  146 ccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaag 245  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||  | |||||  ||||||||||||||||||| | |||||| ||| || |||||    
T  9339129 ccgaaacatagcaattttagggtattttgatgtaattcatgaagaaatcattcaaatctgcaaagcaagacatctgaagatttgtgaggactttaggaag 9339228  T
Q  246 atcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    || |  |||||||||||||||||  |  ||||||| || |||||||| ||||||||||    
T  9339229 atgaaaaatgaagattcaagaggcatttgaagacattacaaagggagtaattatgttc 9339286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 166 - 343
Target Start/End: Original strand, 21079892 - 21080069
Alignment:
Q  166 ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaag 265  Q
    ||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| | | |||||||| ||||  |||| | |||||||||||||||    
T  21079892 ggtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaagacatctgaagattagtgaagactttggagagattaagaatgaagattcaag 21079991  T
Q  266 aggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaa 343  Q
    ||| ||  |||||   || | | |||| |||||| |||||||||  |||||||| ||| |||||| ||||||||||||    
T  21079992 aggcctaagaagatgttacagaaggagaaattattttcccaagtgccaagacatcttatatggaagcaaacacctaaa 21080069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 146 - 364
Target Start/End: Complemental strand, 3358088 - 3357869
Alignment:
Q  146 ccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaag 245  Q
    |||||||| ||||||  || |||||||||| ||||||| |||||||||  ||||||| ||||||| ||||||||| || | || |||||||||||  |||    
T  3358088 ccgaaacatagcaatattatggtgttttgacgtaattcgtgaagaaatcatgcaaatcggcaaagaaagacatctaaagatttatgaagaccttgaaaag 3357989  T
Q  246 at-catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    ||  | ||||||||||||||  || |||  |||||| || ||||||||||||| |||||||||||| |||||||| |||  ||||| ||||| |  ||||    
T  3357988 atgaaagaatgaagattcaaagggcctcaaaagacattacaaagggaggaattttgttcccaagttccaagacatgttatgtggaagcaaacgcacaaaa 3357889  T
Q  345 agatgaagaaacatacattt 364  Q
    ||| ||||||| | ||||||    
T  3357888 agacgaagaaaaaaacattt 3357869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 13216465 - 13216580
Alignment:
Q  155 agcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||||||||||||||| ||||||||||   |||||||  ||||||| |||||| ||||| |||||||||| | ||||||||||||||||| ||| ||    
T  13216465 agcaattctagggtgtttttgatgtaattcgcaaagaaatcatgcaaatcggcaaaacaagaacatctgaaaattagtgaagaccttgggaaggtcaaga 13216564  T
Q  253 atgaagattcaagagg 268  Q
    ||||||||||||||||    
T  13216565 atgaagattcaagagg 13216580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 141 - 315
Target Start/End: Original strand, 22404400 - 22404575
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacctt 239  Q
    |||||| |||||| | ||||| ||||| ||||| | |||||||||||||||||  |||||||  ||||| ||||| ||||  || | |||||||||| ||    
T  22404400 ttttcctgaaacataccaattttagggggtttttaagtaattcatgaagaaatcatgcaaatcagcaaatcaagaacatccaaagatttgtgaagacttt 22404499  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaag 315  Q
    ||||||| || |||||||||||||||||| ||| | ||||  || |  |||||||||| |||||||||||||||||    
T  22404500 gggaagaccaagaatgaagattcaagaggcctcaggagactttacagtgggaggaattttgttcccaagtttcaag 22404575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 27961162 - 27961084
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctg 221  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||    
T  27961162 ttcccgaaacatagcaattctagggtgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagaaagacatctg 27961084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 318
Target Start/End: Original strand, 8038198 - 8038375
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||| ||||| ||||||| ||||||||||| || |||||| | ||||||||  ||||||| |||||||||| | |||| ||| | |||| || ||||||    
T  8038198 ttcccaaaacatagcaattttagggtgtttttgaagtaatttacgaagaaatcatgcaaatcggcaaagcaaaaacatccgaagatttgtaaataccttg 8038297  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagaca 318  Q
    ||||||||| |||||||||||||||||| |||  ||||   || | |||||| || |||||||||| |||||||||||    
T  8038298 ggaagatcaagaatgaagattcaagaggcctcataagattttacagagggagaaaatatgttcccaggtttcaagaca 8038375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 236 - 346
Target Start/End: Complemental strand, 8246481 - 8246371
Alignment:
Q  236 ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaa 335  Q
    |||||||||||| | |||||||||||||||||| ||||||||||  || | |||||  ||||||||||||||||| |||||||| | |||| |||| |||    
T  8246481 ccttgggaagatgaagaatgaagattcaagaggcctcggaagactttacagagggacaaattatgttcccaagttccaagacatttcacattgaaaaaaa 8246382  T
Q  336 cacctaaaaag 346  Q
    ||||| |||||    
T  8246381 cacctcaaaag 8246371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 158 - 347
Target Start/End: Complemental strand, 10505104 - 10504925
Alignment:
Q  158 aattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaa 257  Q
    ||||||| ||| ||||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||| ||           ||||||||||| ||||||    
T  10505104 aattctaaggtattttgatgtaattcacgaagaaatcatgcaaatcggcaaaacaagacatctgaaaacttc----------gggaagatcatcaatgaa 10505015  T
Q  258 gattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaaga 347  Q
    |||||| |||  ||||||||||| || | |||||  |||| |||||||||||  |||||||| ||| ||| || |||||||| |||||||    
T  10505014 gattcatgagacctcggaagacattacagagggacaaattttgttcccaagtcccaagacatcttatatgaaagcaaacacccaaaaaga 10504925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 325
Target Start/End: Complemental strand, 19246159 - 19246042
Alignment:
Q  208 aagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaa 307  Q
    |||||||||||||||| | || ||  | |||||||||||| | |||||||||||||||||||||||||| ||  || |||| ||| |||| ||||||| |    
T  19246159 aagcaagacatctgaagatttatgtggtccttgggaagatgaagaatgaagattcaagaggtctcggaaaactttacaaagagagaaattttgttcccta 19246060  T
Q  308 gtttcaagacatattaca 325  Q
    |||||||||||| |||||    
T  19246059 gtttcaagacatcttaca 19246042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 344
Target Start/End: Complemental strand, 2588245 - 2588043
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||| |||||  |||||||| ||||||||| ||||||||||| ||||||||  ||  ||| |||||||||||| |||| ||| | | ||||| |||||     
T  2588245 ttcccaaaacatggcaattcttgggtgtttttgatgtaattcacgaagaaatcgtgataatcggcaaagcaagaacatccgaagattagtgaatacctta 2588146  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||||| |||||||||||||||||| ||| ||| ||  |||||| |||| |||| | |||||| ||  |||||||| ||| |||||| |||| |||     
T  2588145 ggaagatcaagaatgaagattcaagaggcctcagaaaactttataaa-ggagaaattttattcccatgtcccaagacatcttatatggaagcaaaaaccc 2588047  T
Q  341 aaaa 344  Q
    ||||    
T  2588046 aaaa 2588043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 14727061 - 14726950
Alignment:
Q  158 aattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    |||||||||||||||| ||||||||||| |||||| |  || ||||||||||| |||||||||| || | | |||||||| |||| |||||||  |||||    
T  14727061 aattctagggtgtttttgatgtaattcacgaagaattcatgaaaattggcaaatcaagacatctaaagattagtgaagactttggaaagatcaaaaatga 14726962  T
Q  257 agattcaagagg 268  Q
    ||||||||||||    
T  14726961 agattcaagagg 14726950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 309
Target Start/End: Original strand, 21546922 - 21547082
Alignment:
Q  147 cgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||  ||  ||| | |||||| | |||| | || | |||||||||| ||||||| |    
T  21546922 cgaaacatagcaattctagggtgttttagtgtaattcaagaagaaatcatg--aatcgacaaagctaaacatttcaagacttgtgaagactttgggaaca 21547019  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagt 309  Q
     ||| || |||||||||||||| |||  |||||| || ||||||||||||| ||||| |||||    
T  21547020 ccataaacgaagattcaagaggcctcaaaagacattacaaagggaggaattttgttcgcaagt 21547082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 148 - 355
Target Start/End: Original strand, 9898020 - 9898229
Alignment:
Q  148 gaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaag-caagacatctgaaaaattgtgaagaccttgggaag 245  Q
    |||||| ||||||| ||||||||| ||||||||||||| ||||||||  | |||||  | |||| ||| ||||||||  | || ||  | ||||||||||    
T  9898020 gaaacatagcaattttagggtgttcttgatgtaattcacgaagaaatcatacaaatcaggaaaggcaatacatctgatgatttatgtggtccttgggaag 9898119  T
Q  246 atcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaa 345  Q
    || | |||| ||||||||||||| ||| |||||   || ||||| ||||||| | ||| |||||| |||||||| |||||| ||| |||||||||| |||    
T  9898120 atgaagaataaagattcaagaggcctcagaagaatttacaaaggaaggaattttattctcaagttccaagacatcttacattgaagcaaacacctataaa 9898219  T
Q  346 gatgaagaaa 355  Q
    |  |||||||    
T  9898220 ggcgaagaaa 9898229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 6629219 - 6629303
Alignment:
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatatta 323  Q
    ||||||||| | |||||||||||||||||| ||| ||||||  || ||||||||||||||| |||||||  | ||||||||||||    
T  6629219 tgggaagatgaagaatgaagattcaagaggcctcagaagactttacaaagggaggaattatattcccaatgtccaagacatatta 6629303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 358
Target Start/End: Complemental strand, 9387506 - 9387350
Alignment:
Q  202 ttggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgt 301  Q
    |||||||||||| | || |||| | |||||||||| |||||| ||  ||||||| |||||||||||| ||| ||||||| || |||  ||||| ||||||    
T  9387506 ttggcaaagcaaaatatttgaagacttgtgaagactttgggatgacaatgaatgtagattcaagaggcctcagaagacattacaaacagaggagttatgt 9387407  T
Q  302 tcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacat 358  Q
    |||||||    ||| | | ||| |||||| |||||| | ||||||| ||||||||||    
T  9387406 tcccaagccaaaagcctttttatatggaagcaaacatccaaaaagacgaagaaacat 9387350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 357
Target Start/End: Original strand, 23644493 - 23644681
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaa-gacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||| ||||||||  |||||||  |||||| || ||||||  || | || ||  | |||| ||||||| | ||| ||||||||||||||    
T  23644493 ttttgatgtaattcacgaagaaatcatgcaaatccgcaaagtaaagacatcctaagatttatgtggtccttaggaagatgaagaaggaagattcaagagg 23644592  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaaca 357  Q
      ||  |||||  ||  |||| ||||||| |||||||||||| ||||| |  |||||| ||| |||||||||||||||| |||||||||    
T  23644593 catcataagactttaagaaggtaggaattctgttcccaagttccaagaaaacttacatagaagcaaacacctaaaaagacgaagaaaca 23644681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 347
Target Start/End: Complemental strand, 34479989 - 34479869
Alignment:
Q  227 ttgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    ||||||||| |||||||||| |||||||||| |||||||||| |||  | || | || |||||||||||||||||||||| |||  ||| ||| ||| ||    
T  34479989 ttgtgaagatcttgggaagaccatgaatgaatattcaagaggcctcaaacgatattacaaagggaggaattatgttcccatgttcgaaggcatcttatat 34479890  T
Q  327 ggaaacaaacacctaaaaaga 347  Q
    | || |||| ||| |||||||    
T  34479889 gaaagcaaatacccaaaaaga 34479869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 34395525 - 34395721
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct---gaaaaattgtgaagaccttgggaagatcatgaa 253  Q
    |||||||| ||||| || |||||||||| ||||||||  ||||||| || || |||| |||| |   ||| | ||||| ||| ||||  |||| ||||||    
T  34395525 caattctatggtgtctttatgtaattcaagaagaaatcatgcaaatcggtaatgcaaaacatatcttgaagatttgtggagatcttgaaaagaccatgaa 34395624  T
Q  254 tgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaaga 353  Q
    ||||||||||| ||| ||  ||||||| |||||||| |||| | |||||||       ||| |||| ||| ||||||  |||||||||||||||||||||    
T  34395625 tgaagattcaaaaggcctttgaagacattataaaggaaggagtaatgttcc-------caaaacatcttatatggaagaaaacacctaaaaagatgaaga 34395717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 8066603 - 8066475
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||||| |||||| || |||| || ||| ||||||| |||||||| ||||||||  ||||||| | |||  ||||| |||| ||| | |||||||||| |    
T  8066603 ttttcctgaaacatagtaattttacgggggttttgaagtaattcaagaagaaatcatgcaaatcgacaagtcaagaacatccgaagatttgtgaagactt 8066504  T
Q  239 tgggaagatcatgaatgaagattcaagag 267  Q
    |||||||| || |||||||||||||||||    
T  8066503 tgggaagaccaagaatgaagattcaagag 8066475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 21845884 - 21845972
Alignment:
Q  181 ttcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||| ||||||||  |||||||||||||| ||||| || |||||||||||| ||||| |||||||||  | |||| |||||||||||||    
T  21845884 ttcacgaagaaatcatgcaaattggcaaatcaagagcaactgaaaaattgtcaagactttgggaagacaaagaataaagattcaagagg 21845972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 356
Target Start/End: Complemental strand, 23591507 - 23591380
Alignment:
Q  229 gtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatgg 328  Q
    |||||||| |||||||||   ||| ||||||||||||||| ||| |||||||   |||||||||||||| | |||   ||   |||||||| ||| |||     
T  23591507 gtgaagactttgggaagacattgagtgaagattcaagaggcctcagaagacatattaaagggaggaattctattctggaggcccaagacatcttatatgt 23591408  T
Q  329 aaacaaacacctaaaaagatgaagaaac 356  Q
    || |||||||| ||||||||||||||||    
T  23591407 aagcaaacacccaaaaagatgaagaaac 23591380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 15600573 - 15600639
Alignment:
Q  155 agcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaat-tggcaaagcaagacatc 219  Q
    ||||||| ||||||||||| ||||||||||| ||||||||| |||||||  ||||||||||||||||    
T  15600573 agcaattttagggtgtttttgatgtaattcacgaagaaattatgcaaatcaggcaaagcaagacatc 15600639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 269
Target Start/End: Complemental strand, 24469749 - 24469620
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagac-atctgaaaaattgtgaagacct 238  Q
    ||||||||||||| | ||||| ||||| ||||| || |||||||| ||||||||  || ||||  ||||  |||||| ||||||| |||||| |||||      
T  24469749 ttttcccgaaacataacaattttagggagtttttgaagtaattcacgaagaaatcatgaaaatcagcaat-caagaccatctgaagaattgtcaagacta 24469651  T
Q  239 tgggaagatcatgaatgaagattcaagaggt 269  Q
    |||||||| || |||||||||||||||||||    
T  24469650 tgggaagaccaagaatgaagattcaagaggt 24469620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 266
Target Start/End: Original strand, 9507418 - 9507543
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaag-accttg 240  Q
    ||||||| ||| ||||||| ||||||||||| ||||||||||| ||||||||  |  |||| |||||| ||| ||||||||| | | |||||| || |||    
T  9507418 ttcccgagacatagcaattatagggtgtttttgatgtaattcacgaagaaatcataaaaatcggcaaatcaaaacatctgaagattagtgaagaactttg 9507517  T
Q  241 ggaagatcatgaatgaagattcaaga 266  Q
    | || |||| |||| |||||||||||    
T  9507518 gaaaaatcaagaataaagattcaaga 9507543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 22564701 - 22564778
Alignment:
Q  147 cgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagc-aagacatctga 222  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||||||||  ||||||| | |||||| |||||||||||    
T  22564701 cgaaacatagcaattttagggtgttgttgatgtaattcacgaagaaatcatgcaaatcgacaaagctaagacatctga 22564778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 14723628 - 14723540
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaaga 235  Q
    |||||| ||||||| |||||  |||||| |||||||| ||||||||  |||||||  ||||| ||||| |||||||| |||||||||||    
T  14723628 gaaacatagcaattttaggggtttttgaagtaattcacgaagaaatcatgcaaatcagcaaatcaagaacatctgaagaattgtgaaga 14723540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 20080686 - 20080555
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| || |||| |||||| || |||||||||||||  |||||||  || |||| || ||||||||||||||||| | || ||  | |||  |    
T  20080686 ttcccgaaacatagaaattttagggtcttcttgatgtaattcacaaagaaatcatgtaaatcggaaaagcaagacatctgaatatttatg-tggcctcag 20080588  T
Q  242 gaagatcatgaatgaagattcaagaggtctcgg 274  Q
    |||||| | |||||||||||||||||| |||||    
T  20080587 gaagatgaagaatgaagattcaagaggcctcgg 20080555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 17822201 - 17822267
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaaga 235  Q
    |||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||| |||||||||||    
T  17822201 ttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattgtgaaga 17822267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 14076347 - 14076258
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaatt 228  Q
    ||||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||  ||||||||| |||| |||| ||||||||| ||||    
T  14076347 ttttcccgaaacatagcaattttaggtagtttttgaagtaattcacgaagaaatcatgcaaattgacaaatcaagaacatctgaagaatt 14076258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 16167689 - 16167580
Alignment:
Q  230 tgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatgga 329  Q
    ||||||| |||| |||| ||||||||||||||||| ||| |||  |||||| || ||| | |||| |||| |||||||||  | |||||| ||| |||||    
T  16167689 tgaagactttggcaagaccatgaatgaagattcaataggcctcataagacattacaaaagaaggagttattttcccaagtcccgagacatcttatatgga 16167590  T
Q  330 aacaaacacc 339  Q
    |  |||||||    
T  16167589 agaaaacacc 16167580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 20404184 - 20404229
Alignment:
Q  168 tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaa 213  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  20404184 tgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaa 20404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 14639211 - 14639108
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| ||||||||  |||||||  ||||||| |||||| ||||| ||| |||| |||||||||||  || ||||||  | ||||||||||||||||||    
T  14639211 ttttgaagtaattcaataagaaatcatgcaaatcggcaaatcaagaacatatgaagaattgtgaagat-ttaggaagacaaagaatgaagattcaagagg 14639113  T
Q  269 tctcg 273  Q
     ||||    
T  14639112 cctcg 14639108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 16167772 - 16167716
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaat 193  Q
    |||||||||||  |||| || |||| ||||||||||||||||||||| | |||||||    
T  16167772 ctaattttcccataacatagtaattatagggtgttttgatgtaattcttaaagaaat 16167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 16175721 - 16175677
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaat 193  Q
    ||||| || ||||||| ||||||||||||||||||| ||||||||    
T  16175721 aaacatagtaattctatggtgttttgatgtaattcacgaagaaat 16175677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 23087322 - 23087422
Alignment:
Q  206 caaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccc 305  Q
    ||||| ||||||| |||| |||||||||||| ||||||| |  | ||||||||||| |||||| |    |||||| || | ||||||||||| |||||||    
T  23087322 caaagtaagacatgtgaagaattgtgaagactttgggaataataagaatgaagattaaagaggccataaaagacattacagagggaggaattctgttccc 23087421  T
Q  306 a 306  Q
    |    
T  23087422 a 23087422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 23230187 - 23230279
Alignment:
Q  215 acatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaa 307  Q
    ||||||||| |||||| ||||| ||||| ||| ||  ||||||||||||||||| ||  | ||||  || | ||||||||| |||||||||||    
T  23230187 acatctgaagaattgtcaagactttggggagaccaacaatgaagattcaagaggcctaaggagactttacacagggaggaactatgttcccaa 23230279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 9e-56; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 143 - 365
Target Start/End: Original strand, 14235433 - 14235655
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||| | |||| ||||| |||||    
T  14235433 ttcccgaaacatagcaattttagggtgttttgatgtaattcacgaagaaatcatgcaaattggcaaaacaagacatctgaagacttgttaagactttggg 14235532  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    |||||  |||| ||| |||||||| ||||| | ||||| || | |||||||||||||||| |||||| ||||||||| ||| |||||| |||||||| ||    
T  14235533 aagattgtgaaagaaaattcaagacgtctcaggagacattacagagggaggaattatgttgccaagtctcaagacatcttatatggaagcaaacacccaa 14235632  T
Q  343 aaagatgaagaaacatacattta 365  Q
    || |||||||||||| |||||||    
T  14235633 aaggatgaagaaacagacattta 14235655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 27912008 - 27911848
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaaga 246  Q
    |||||| |||||||||||||||||||||||||||||| ||| ||||  ||||||| |||||||||| || ||| ||||| ||||||||| ||||||||||    
T  27912008 gaaacatagcaattctagggtgttttgatgtaattcaagaaaaaatcatgcaaatcggcaaagcaaaacgtcttgaaaacttgtgaagatcttgggaaga 27911909  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaa 307  Q
     ||||||||||||||||||||| ||| ||||||| || |||  |||||||| |||||||||    
T  27911908 ccatgaatgaagattcaagaggcctcagaagacattacaaacagaggaattttgttcccaa 27911848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 344
Target Start/End: Complemental strand, 26101809 - 26101606
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||| ||||||||||| |||||| |||| ||||||||  |||||||||||||||||||| |||| ||| | | ||||||||||||    
T  26101809 ttcccgaaacatagcaattatagggtgtttttgatgtagttcacgaagaaatcatgcaaattggcaaagcaagaacatccgaagattagtgaagaccttg 26101710  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||| |||| ||||||||||||||||||||||  ||||   || | |||||| |||| ||||| || ||  |||||||| ||| ||||||||||| |||     
T  26101709 ggaatatcaagaatgaagattcaagaggtctcataagaatttacagagggagaaattctgttcacaggtcccaagacatcttatatggaaacaaagaccc 26101610  T
Q  341 aaaa 344  Q
    ||||    
T  26101609 aaaa 26101606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 337
Target Start/End: Original strand, 17543263 - 17543458
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| ||||||| |||  ||||||  ||||||||||||||||||  |||| || |||||||||||||||||||| | |||||||  |||||||    
T  17543263 ttccctaaacatagcaattttagcatgttttattgtaattcatgaagaaataatgcatataggcaaagcaagacatctgaagatttgtgaaatccttggg 17543362  T
Q  243 aagat-catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
     ||||  | |||||||||||||| ||||||| || |||  || | ||||| ||||| |||||||||||| |||||||| |||||| ||||||||||    
T  17543363 gagatgaaagaatgaagattcaataggtctcagacgacgttacagagggatgaattttgttcccaagttccaagacatcttacatagaaacaaaca 17543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 149 - 358
Target Start/End: Complemental strand, 16114743 - 16114533
Alignment:
Q  149 aaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| |||| ||||||||||||||||||||||  |||| ||    |||||||||||| | || | |||||||  ||||||||||||    
T  16114743 aaacatagcaattttaggatgttcttgatgtaattcatgaagaaatcatgcatatcattaaagcaagacatataaagatttgtgaattccttgggaagat 16114644  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaaga 347  Q
     | |||||||||||||||||| ||  ||||||  || |||||||| | || |||||||||||| |||||||| |||||| |||  |||||| |||||||     
T  16114643 gaagaatgaagattcaagaggccttagaagactttacaaagggagtatttttgttcccaagttccaagacatcttacattgaagtaaacacttaaaaagg 16114544  T
Q  348 tgaagaaacat 358  Q
    |||||||||||    
T  16114543 tgaagaaacat 16114533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 143 - 344
Target Start/End: Original strand, 12011332 - 12011534
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| ||||||| |||||| ||||||  ||||||| ||||||||  |||||||| ||||||||||| |||  ||||| |||||||||||||||    
T  12011332 ttccctaaacaaagcaattttagggtcttttgagataattcacgaagaaatcatgcaaattagcaaagcaagaacattcgaaaatttgtgaagaccttgg 12011431  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    |||||||| |||||||||||||| ||| |||  |||||  || | ||| ||||||| ||||| || ||  |||||||  ||| |||||| |||||||| |    
T  12011432 gaagatcaagaatgaagattcaataggcctcaaaagactttacagaggaaggaattttgttctcaggtcccaagacaacttatatggaagcaaacaccca 12011531  T
Q  342 aaa 344  Q
    |||    
T  12011532 aaa 12011534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 326
Target Start/End: Complemental strand, 24282951 - 24282766
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||||| || ||||||| ||||||||| ||||||||||||| ||||||||   |||||   |||||||||||||||| ||| | || ||  | |||||    
T  24282951 ttcccgaaccatagcaattttagggtgttcttgatgtaattcacgaagaaatcaagcaaaccaggcaaagcaagacatccgaagatttatgtggtccttg 24282852  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    ||||||| | ||||||| |||||||||| |||  |||||  || |||||||||||||||||||||||||| ||| |||| ||||||    
T  24282851 ggaagatgaagaatgaatattcaagaggcctcataagactttacaaagggaggaattatgttcccaagttacaatacatcttacat 24282766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 166 - 365
Target Start/End: Complemental strand, 26652503 - 26652304
Alignment:
Q  166 ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaag 265  Q
    ||||||||||||||||| | ||||||||  ||||||||| ||||| ||||||| |||| | |||||||||| |||| |||||||||||||||||||| |     
T  26652503 ggtgttttgatgtaatttacgaagaaatcatgcaaattgacaaagtaagacatttgaatacttgtgaagactttggaaagatcatgaatgaagattccac 26652404  T
Q  266 aggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattta 365  Q
    | | ||| ||||| | || | ||||| ||| | ||||| |||||  |||||||| | | ||||||  ||| ||| || |||| ||||||||| |||||||    
T  26652403 aagcctctgaagaaattacatagggatgaaatttgttctcaagtcccaagacatctcatatggaagtaaatacccaagaagacgaagaaacacacattta 26652304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 358
Target Start/End: Original strand, 20033280 - 20033482
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaa-gcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatg 255  Q
    ||||||||||||||||| || || |||| ||||||||  ||||||| | |||| |||| | || |||| | || |||  |  ||||||||| ||||||||    
T  20033280 caattctagggtgttttaatttagttcaagaagaaatcatgcaaatcgacaaaagcaaaaaatttgaagacttttgacaatattgggaagaccatgaatg 20033379  T
Q  256 aagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    ||||||||||||| ||| ||||||| |  |||||||| |||||||||| |||||  |||||||| ||| ||  || |||||||| ||||||| |||||||    
T  20033380 aagattcaagaggcctcagaagacatttcaaagggagaaattatgttctcaagtcccaagacatcttatattaaagcaaacacccaaaaagacgaagaaa 20033479  T
Q  356 cat 358  Q
    |||    
T  20033480 cat 20033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 149 - 297
Target Start/End: Original strand, 17016987 - 17017136
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaa-ttgtgaagaccttgggaagat 247  Q
    ||||| ||||||||||| ||||||||||||||| || ||| ||||  ||||||| |||||| ||| |||||| ||| | || | |||| |||||||| |     
T  17016987 aaacatagcaattctagagtgttttgatgtaatccaagaataaatcatgcaaatcggcaaatcaaaacatcttaaagacttataaagatcttgggaacac 17017086  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaatt 297  Q
    | |||||||||||||||||||||| | |||||| || |||||||||||||    
T  17017087 cgtgaatgaagattcaagaggtcttgaaagacattacaaagggaggaatt 17017136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 22621743 - 22621616
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgt---tttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacct 238  Q
    ||||||||||| | |||||||||| |||   |||||||||||||| ||||||||  ||||||||||||||||||| ||||| ||| | | ||||||||||    
T  22621743 ttcccgaaacataccaattctaggatgtgtttttgatgtaattcacgaagaaatcatgcaaattggcaaagcaagaacatccgaagattagtgaagacct 22621644  T
Q  239 tgggaagatcatgaatgaagattcaaga 266  Q
    |  |||||||| ||||||||||||||||    
T  22621643 tcagaagatcaagaatgaagattcaaga 22621616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 329
Target Start/End: Original strand, 12262266 - 12262432
Alignment:
Q  163 tagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagatcatgaatgaagatt 261  Q
    |||| ||||||||||||||| | ||||||||  || ||||||||||| ||| |||||| ||| | ||| ||||| |||||||| | ||||||||||||||    
T  12262266 taggatgttttgatgtaatttaagaagaaatcatgaaaattggcaaaacaatacatcttgaagagttgcgaagatcttgggaaaaccatgaatgaagatt 12262365  T
Q  262 caagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatgga 329  Q
    ||| |||  |||||||| | || ||||||| |||||||| ||||||||  |||||||| ||| |||||    
T  12262366 caaaaggcatcggaagatattacaaagggaagaattatg-tcccaagtcccaagacatcttatatgga 12262432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 339
Target Start/End: Original strand, 15526942 - 15527141
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    |||||| |||||| ||||||| |||| |||| ||| |||||||||  |||||||  ||||||||||||||| |||||||| ||| | || ||  | ||||    
T  15526942 ttttcctgaaacatagcaattttaggatgttcttgttgtaattcacaaagaaatcatgcaaattggcaaagtaagacatccgaagatttatgtggtcctt 15527041  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||  | || | |||| |||||||||||| | ||||  || | |||||||||||||||||||||||| |||| ||| |||||| |||  |||||||    
T  15527042 gggaagacgaagattaaagactcaagaggtctcagcagacgttacagagggaggaattatgttcccaagttccaagtcattttacattgaagaaaacacc 15527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 339
Target Start/End: Original strand, 15811591 - 15811790
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    |||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||||||  |||||||||| ||||||||||||| ||  | ||  |  | ||||    
T  15811591 ttttcctgaaacatagcaattttagggggttcttgatgtaattcacgaagaaatcatgcaaattggaaaagcaagacatccgacgatttacgtggtcctt 15811690  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||  | || |||||||| |||||| |||  |||||  || | |||| ||||||||||||||||||| |||||||| |||||| |||  |||||||    
T  15811691 gggaagacgaagattgaagatttaagaggcctcataagacgttacagagggtggaattatgttcccaagttccaagacatcttacattgaaggaaacacc 15811790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 304
Target Start/End: Complemental strand, 7881738 - 7881580
Alignment:
Q  149 aaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagc-aagacatctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||| ||||||| |||| |||||| ||||||||||| ||||||||  |||||||||||||||| |||||||||||| | || ||  | ||||| |||||    
T  7881738 aaacatagcaattttaggatgtttttgatgtaattcacgaagaaatcatgcaaattggcaaagcaaagacatctgaagatttatgtggtccttgagaaga 7881639  T
Q  247 tcatgaatgaagattcaag-aggtctcggaagacaatataaagggaggaattatgttcc 304  Q
    | | ||||||||||||||| ||| |||  |||||  || ||||||||||||||||||||    
T  7881638 taaagaatgaagattcaagaaggcctcataagactttacaaagggaggaattatgttcc 7881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 377
Target Start/End: Complemental strand, 24464567 - 24464330
Alignment:
Q  142 tttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    |||||||||||| ||||||| || | ||||||||| ||| ||| |||||| |  || |||||| |||| ||||||||||||| | |||||||||| |||     
T  24464567 tttcccgaaacatagcaattatatgttgttttgatataactcacgaagaa-tcatgaaaattg-caaaacaagacatctgaagacttgtgaagactttgt 24464470  T
Q  242 gaagatcat----gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    |||||||||    |||| ||||||||||| | |||| |||||| || ||| ||||||||| ||| |||||||   ||||||| ||| |||||| ||||||    
T  24464469 gaagatcatatatgaataaagattcaagaagcctcgtaagacattacaaatggaggaattttgtacccaagtccaaagacattttatatggaagcaaaca 24464370  T
Q  338 cctaaaaagatgaagaaacatacatttacgtgcaagaaaa 377  Q
    ||  |||||| |  ||||||  |||||||| ||| |||||    
T  24464369 ccctaaaagacgttgaaacaagcatttacgcgcaggaaaa 24464330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 143 - 344
Target Start/End: Original strand, 27116371 - 27116568
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| |||||||||||||| |||| ||||||||||  |||||||  ||||||| ||||||| ||| ||||| ||| | | |||||||||||||    
T  27116371 ttcccgaaacatagcaattctagggtttttttatgtaattcacaaagaaatcatgcaaatcggcaaagtaagaacatccgaagattggtgaagaccttgg 27116470  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    |||||||| ||||     ||||||||| ||||||||||  || |||| || ||||| ||| |||| ||  |||||||  ||| ||| || |||||||| |    
T  27116471 gaagatcaagaat-----ttcaagaggcctcggaagactttacaaagagatgaattttgtacccaggtcccaagacaacttatatgaaagcaaacaccca 27116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 26581521 - 26581396
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||| |||||| ||||||| |||||||||||||||||||  | ||||||||  | ||||| ||| |||||| |||| ||||   |||||||||| ||||     
T  26581521 ttcctgaaacatagcaattttagggtgttttgatgtaatcaaagaagaaatcatccaaatcggctaagcaaaacatttgaaggcttgtgaagactttgga 26581422  T
Q  243 aagatcatgaatgaagattcaagagg 268  Q
    |||| |||||||||||||||||||||    
T  26581421 aagaccatgaatgaagattcaagagg 26581396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 307
Target Start/End: Original strand, 13134249 - 13134396
Alignment:
Q  161 tctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagaccttgggaagatcatgaatgaaga 259  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||  |||| ||||| |||| |  ||||||||  |||||||| ||| ||||| |||    
T  13134249 tctagggtgttttgatgtaattcatgaagaaatcatgcaaatcggcatggcaaaacatcttgaagacatgtgaaga-tttgggaaggtcaagaatgtaga 13134347  T
Q  260 ttcaagaggtctcggaagacaatataa-agggaggaattatgttcccaa 307  Q
    ||||||||| |||  |||||| || || ||||||||||| |||||||||    
T  13134348 ttcaagaggcctctaaagacattacaagagggaggaattttgttcccaa 13134396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 141 - 315
Target Start/End: Original strand, 15542454 - 15542630
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||| |||||||| ||||||| || || ||||| || |||||||| ||||||||   |||||| |||||| ||||| |||||||| |||||| ||||| |    
T  15542454 tttttccgaaacatagcaattttaaggggtttttgaagtaattcacgaagaaatcacgcaaatcggcaaatcaagaacatctgaagaattgtcaagactt 15542553  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaag 315  Q
    | |||||| || |||||||||||||||||| |||   ||||  || | |||||||| ||||||||||||||| ||||    
T  15542554 tcggaagaccaagaatgaagattcaagaggcctcaagagactttacatagggaggacttatgttcccaagttccaag 15542630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 170 - 312
Target Start/End: Complemental strand, 9403261 - 9403118
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||   | ||||||||||| ||||| ||||| || | |||||||||| ||||||||| || |||| |||||||||||||    
T  9403261 ttttgaagtaattcacgaagaaatcaaggaaattggcaaatcaagaacatctaaacatttgtgaagactttgggaagaccaagaattaagattcaagagg 9403162  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtttc 312  Q
    |||| | ||||  || |  ||||||||||||||||| |||||||    
T  9403161 tctcaggagactttacagtgggaggaattatgttccaaagtttc 9403118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 14782481 - 14782310
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| || |||  |||||| |||||||| ||||||||  ||||||| || ||| ||||| ||| |||| |||||| || || |    
T  14782481 ttttcccgaaacatagcaattttatgggatttttgaagtaattcacgaagaaatcatgcaaatcggaaaatcaagaacatatgaagaattgtcaaaactt 14782382  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||||| || |||||||||||||| ||| ||| | ||||  || | ||||||| ||||||||||||||||    
T  14782381 tgggaagaccaagaatgaagattcaaaaggcctcaggagactttaaatagggaggcattatgttcccaagtt 14782310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 319
Target Start/End: Complemental strand, 44797068 - 44796889
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| |||||| |  ||||||| |  ||| ||||||||||||| | || ||  | ||||    
T  44797068 ttttcccgaaacatagtaattttagggtgttcttgatgtaattcacgaagaagtcatgcaaatcgaaaaaccaagacatctgaagatttatgtggtcctt 44796969  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    |||||||  | ||   | ||||||||||| ||| ||||||  || | |||||||||||||||||||||||| ||||||||    
T  44796968 gggaagacgaagatcaatgattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacat 44796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 326
Target Start/End: Complemental strand, 35133837 - 35133649
Alignment:
Q  139 aattttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacc 237  Q
    |||||| | |||||| ||||||| ||||||||| ||||||||||||| ||||||||  || ||||  |||||||||||||||  || | || ||  | ||    
T  35133837 aatttttctgaaacatagcaattttagggtgttcttgatgtaattcacgaagaaatcatgaaaatcagcaaagcaagacatccaaagatttttgtggtcc 35133738  T
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |||  ||||  | || |||| |||||||||| ||| ||||||  || ||||||  |||||||||||||||||| |||||||| ||||||    
T  35133737 ttgaaaagaagaagattgaatattcaagaggcctcagaagacgttacaaagggtagaattatgttcccaagttccaagacatcttacat 35133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 344
Target Start/End: Original strand, 16786241 - 16786444
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||| || |||||||| ||| ||||||| ||||||||  ||||||| ||||||  |||| |||| ||| | | |||||| |||||    
T  16786241 ttcccgaaacatagcaattttatggtgtttttgatctaattcacgaagaaatcatgcaaatcggcaaactaagaacatccgaagactagtgaaggccttg 16786340  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||| |||| |||||||||||||| ||  |||  |||||  || | |||||| ||||||||| ||| ||  ||| |||| ||| |||||| ||||||||     
T  16786341 ggaatatcaagaatgaagattcaaaagacctcataagactttacagagggagaaattatgtttccaggtcccaatacatcttatatggaagcaaacaccc 16786440  T
Q  341 aaaa 344  Q
    ||||    
T  16786441 aaaa 16786444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 339
Target Start/End: Original strand, 23035066 - 23035264
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| | ||||| ||||||||| ||||||||| ||| ||||||||  |||||||  |||||||||||||||  || | || ||  | ||||    
T  23035066 ttttcccgaaacataccaattttagggtgttcttgatgtaa-tcacgaagaaatcatgcaaatcagcaaagcaagacatccaaagatttatgtggtcctt 23035164  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
     ||||||  | || | ||||||||||| | |||  |||||  || ||| |||||||||||||||||||||| |||||||| |||||| |||  |||||||    
T  23035165 aggaagacaaagattcaagattcaagatgcctcataagacgttacaaaaggaggaattatgttcccaagttccaagacatcttacattgaagaaaacacc 23035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 310
Target Start/End: Original strand, 21333221 - 21333384
Alignment:
Q  149 aaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||| |||| | ||||| ||||||||     
T  21333221 aaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattttcaagactttgggaagg 21333320  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
     || ||||| |||||||||||| ||||  ||||  || |   ||||||||| ||||||||||||    
T  21333321 ccaagaatggagattcaagaggcctcgtgagactttacatcaggaggaattctgttcccaagtt 21333384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 310
Target Start/End: Complemental strand, 21450722 - 21450548
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaag 234  Q
    |||||||| |||||||| ||||||| ||||| | |||||| |||||||| ||||||||  |||||||  ||||| ||||| |||||  | |||||| |||    
T  21450722 ctaattttaccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcagcaaatcaagaacatctagagaattgtcaag 21450623  T
Q  235 accttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    || ||||||||| || ||  |||||||||||||| ||| |  || | || | ||||||||||| ||||||||||||    
T  21450622 actttgggaagaccaagagagaagattcaagaggcctcaggtga-attacatagggaggaattttgttcccaagtt 21450548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 345
Target Start/End: Original strand, 25959702 - 25959808
Alignment:
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    |||||||||| | |||||||||||||||||| ||   |||||  |||||||||||||||| | ||| ||||||||||||||| |||||| |||  |||||    
T  25959702 ttgggaagatgaagaatgaagattcaagaggcctaa-aagactttataaagggaggaattcttttctcaagtttcaagacatcttacattgaagaaaaca 25959800  T
Q  338 cctaaaaa 345  Q
    ||| ||||    
T  25959801 cctgaaaa 25959808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 326
Target Start/End: Original strand, 26647502 - 26647688
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttt-tgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    |||||||||| || ||||||| || ||||||  | |||||||||| ||||||||  |||||||||  ||||||||||||| ||| | || ||  | ||||    
T  26647502 ttttcccgaatcatagcaattttaaggtgttcattatgtaattcacgaagaaatcatgcaaattgctaaagcaagacatccgaagatttatgtggtcctt 26647601  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |||||||  | || | ||||||||||||| |||  |||||  || | ||||||||||| |||||||| ||| ||| |||| ||||||    
T  26647602 gggaagacgaagattcaagattcaagaggcctcataagacgttacagagggaggaattttgttcccatgttccaacacatcttacat 26647688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 18527642 - 18527771
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||||||| || ||| |||| |||||| || |  ||| ||||| |    
T  18527642 ttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggtaaatcaagaacatctaaagatatgtcaagactt 18527741  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    | |||||| || ||||||||||||||||||    
T  18527742 taggaagaccaagaatgaagattcaagagg 18527771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 22507520 - 22507616
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||||||| |||||| |||| ||||||||| |||||| ||||    
T  22507520 ttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattgtaaaga 22507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 280
Target Start/End: Original strand, 10063123 - 10063246
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    |||||||||| ||||||||||||||| | ||| ||||  | |||||  ||||| ||| |||| |||||||||| |||||| ||| ||| | |||||| ||    
T  10063123 caattctaggatgttttgatgtaatttacgaataaatcatacaaatctgcaaaacaaaacatttgaaaaattgcgaagactttgagaaaaccatgaacga 10063222  T
Q  257 agattcaagaggtctcggaagaca 280  Q
    | ||| ||||||  ||||||||||    
T  10063223 atatttaagaggcatcggaagaca 10063246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 13267766 - 13267667
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||  ||||| | || ||| ||||| |||||||| | |||||||||| ||||||||| || |||| |||||||||||||    
T  13267766 ttttgaagtaattcacgaagaaatcatgcaagtcgggaaatcaagaacatctgaagatttgtgaagactttgggaagaccaagaataaagattcaagagg 13267667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 324
Target Start/End: Original strand, 9783193 - 9783310
Alignment:
Q  207 aaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    ||||||||||||| ||| | || ||  | |||||||||||| |  ||||||| ||||||||| |||  |||||  || | ||||||||||| ||||||||    
T  9783193 aaagcaagacatccgaagatttatgtggtccttgggaagatgaaaaatgaaggttcaagaggcctcataagactttacagagggaggaattttgttccca 9783292  T
Q  307 agtttcaagacatattac 324  Q
    |||| |||||||| ||||    
T  9783293 agttccaagacattttac 9783310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 21848575 - 21848408
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagc-aagacatctgaaaaattgtgaagaccttg 240  Q
    |||| |||||| || |||| ||||||||||| |||||||||||  |||||||  ||||||| |||||||| |||||||||||| | || ||  | |||||    
T  21848575 ttcctgaaacatagaaattttagggtgtttttgatgtaattcacaaagaaatcatgcaaatcggcaaagcaaagacatctgaagatttatgtggtccttg 21848476  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaag 315  Q
    |||||       |||||||||||||| | |||  |||||  || |||||| |||||| |||||||||||| ||||    
T  21848475 ggaag-------atgaagattcaagatgcctcaaaagactttacaaagggtggaattttgttcccaagttccaag 21848408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 25402581 - 25402677
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    |||||| |||| | ||||||| ||||| | |||||| |||||||| ||||||||   ||||||||||||| |||| ||||||||||||||| |||||    
T  25402581 ttttcctgaaatatagcaattttaggggggttttgaagtaattcacgaagaaatcaagcaaattggcaaatcaagaacatctgaaaaattgcgaaga 25402677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 21663110 - 21663149
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  21663110 ttattcttagcatgtttttcagtcattttcagtaggtttt 21663149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 310
Target Start/End: Original strand, 21663277 - 21663407
Alignment:
Q  180 attcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaaga 278  Q
    ||||| ||||||||  || |||| |||||| ||||| |||||||| |||||| ||||  |||| |||| || |||||||||||||||||| |||   |||    
T  21663277 attcacgaagaaatcatgtaaatcggcaaatcaagaacatctgaagaattgtcaagat-ttggcaagaccaagaatgaagattcaagaggcctcacgaga 21663375  T
Q  279 caatataaagggaggaattatgttcccaagtt 310  Q
    |  || | ||||||||||| ||||||||||||    
T  21663376 ctttacatagggaggaattctgttcccaagtt 21663407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 304
Target Start/End: Complemental strand, 26022316 - 26022181
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| | ||||||  ||||||| |||||| ||||| |||||||  | |||||||||| |||| |||| || |||  || |||||| |||    
T  26022316 ttttgaagtaattcacggagaaatcatgcaaatcggcaaatcaagaacatctgatgatttgtgaagactttggaaagaccaagaaataaaattcaaaagg 26022217  T
Q  269 tctcggaagacaatataaagggaggaattatgttcc 304  Q
     ||| ||||||  || ||||||||||||| ||||||    
T  26022216 cctcagaagactttacaaagggaggaattttgttcc 26022181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 27973380 - 27973341
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  27973380 ttattcttagcatgtttttcagtcattttcagtaggtttt 27973341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 20107805 - 20107731
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga 215  Q
    ||||||||||||| ||||||| |||||  |||||| |||| ||| ||||||||  ||||||| |||||| |||||    
T  20107805 ttttcccgaaacatagcaattttaggggtttttgaagtaaatcacgaagaaatcatgcaaatcggcaaatcaaga 20107731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 16363700 - 16363667
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagta 48  Q
    ||||| ||||||||||||||||||||||||||||    
T  16363700 ttatttttagcatgttttccagtcattttcagta 16363667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 235
Target Start/End: Complemental strand, 18832167 - 18832070
Alignment:
Q  140 attttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaaga 235  Q
    |||||||| ||||| |||||||  |||| ||||| || ||| |||| ||||||||  |||||||||| ||| ||||| |||||||| |||||||||||    
T  18832167 attttcccaaaacatagcaatttaagggggtttttgaagtacttcacgaagaaatcatgcaaattggaaaatcaagaacatctgaagaattgtgaaga 18832070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 22626300 - 22626425
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    |||||| ||||||  |||||| ||||||||| ||||||||||||| ||| | ||  ||||||| ||||||| |||||||  ||||| || ||  | ||||    
T  22626300 ttttcctgaaacatggcaattttagggtgttcttgatgtaattcacgaaaagatcatgcaaatcggcaaagtaagacattcgaaaatttatgtggtcctt 22626399  T
Q  240 gggaagatcatgaatgaagattcaag 265  Q
    |||||||  | || ||||||||||||    
T  22626400 gggaagacgaagattgaagattcaag 22626425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 12210343 - 12210303
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| |||||| |||||||| |||||    
T  12210343 attattcttagcatgtttttcagtcaatttcagtaggtttt 12210303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 14235308 - 14235348
Alignment:
Q  19 tcttagcatgttttccagtcattttcagtatgtttttcatc 59  Q
    |||||||||||||| |||||||||| |||| ||||||||||    
T  14235308 tcttagcatgtttttcagtcatttttagtaggtttttcatc 14235348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 24464691 - 24464643
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttttcatctaga 63  Q
    |||||||||||||||||| ||||||||| ||  | ||||||||||||||    
T  24464691 ttattcttagcatgtttttcagtcatttccaacaggtttttcatctaga 24464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 141 - 366
Target Start/End: Original strand, 12940 - 13165
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||| |||||| |||||||||||| |||||||||||||||||  |||||||   |||||| | |||||||||| || |||| | |||||||||| |||    
T  12940 ttttcctgaaacatagcaattctaggatgttttgatgtaattcacaaagaaatcaagcaaatcgacaaagcaagaaatgtgaagacttgtgaagactttg 13039  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||||||||||||||||||||||||| ||||||||  | || |||||||| |||||||||| |||||   ||||||  ||| |||||| ||||||||     
T  13040 ggaagatcatgaatgaagattcaagaggcctcggaaggaattacaaagggagaaattatgttctcaagtcctaagacaccttatatggaagcaaacaccc 13139  T
Q  341 aaaaagatgaagaaacatacatttac 366  Q
    ||||||| |||||||||| |||||||    
T  13140 aaaaagacgaagaaacatgcatttac 13165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 12041 - 11916
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| |||||||||||||||||||||| ||||| | ||||||||  | |||||  |||||||||||||||| |||| | |||||||| ||| |    
T  12041 ttcccaaaacatagcaattctagggtgttttgatttaatttacgaagaaatcatacaaatcagcaaagcaagacatctaaaaattagtgaagactttgcg 11942  T
Q  243 aagatcatgaatgaagattcaagagg 268  Q
    || |||| ||||||||||||||||||    
T  11941 aaaatcaagaatgaagattcaagagg 11916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 143 - 318
Target Start/End: Original strand, 25572610 - 25572786
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| | ||||| |||| ||||||| ||||| |||| ||||||||  |||| || | |||||||||||||||||| | |||||||||||||||    
T  25572610 ttcccaaaacatatcaattttaggatgttttgttgtaaattcacgaagaaatcatgcatatcgacaaagcaagacatctgaagatttgtgaagaccttgg 25572709  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagaca 318  Q
    |||||| | ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  25572710 gaagatgaagaaggaagattcaagaggtctcggaagacattacaaagggaggaattatgttcccaagtctcaagaca 25572786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 141 - 365
Target Start/End: Complemental strand, 28254841 - 28254627
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| |||||||||   ||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||| | ||  |||           
T  28254841 ttttcccgaaacatagcaattctttagtgttttgatgcaattcacgaagaaatcatgcaaattggcaaagcaagacatctgaagattttagaa------- 28254749  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
       ||||| ||||||||||||||| ||| |||  |||||| || ||| |||||||||||||||  ||||| |||||||| |||||||||| ||||||||     
T  28254748 ---agatcgtgaatgaagattcaaaaggcctcataagacattacaaatggaggaattatgttcagaagttccaagacatcttacatggaagcaaacacca 28254652  T
Q  341 aaaaagatgaagaaacatacattta 365  Q
    ||||||||||||||||| |||||||    
T  28254651 aaaaagatgaagaaacaaacattta 28254627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 140 - 358
Target Start/End: Original strand, 107805 - 108022
Alignment:
Q  140 attttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||| |||||| || || | |||||||||||||||| |||||  |||||||  | ||||||| ||||||||||||||| || | |||| ||||| ||    
T  107805 attttcctgaaacatagaaactttagggtgttttgatgtgattcacaaagaaatcgtacaaattg-caaagcaagacatctaaagacttgtaaagacttt 107903  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||||||||||||||||||||||||  || ||| ||| || ||| ||||||||||||||| |||||  || ||||| |||||||||| ||| ||||    
T  107904 gggaagatcatgaatgaagattcaagaggcatcagaaaacattacaaatggaggaattatgttctcaagtcccatgacatcttacatggaaccaatcacc 108003  T
Q  340 taaaaagatgaagaaacat 358  Q
     || |||| ||||||||||    
T  108004 caataagacgaagaaacat 108022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 356
Target Start/End: Complemental strand, 18227548 - 18227348
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaat 254  Q
    ||||||| |||| ||||| ||||||||||| ||||||||  |||||||  |||||||||||||||| || | |||||| ||| |||||||||| | ||||    
T  18227548 agcaattttaggatgtttagatgtaattcacgaagaaatcatgcaaatcagcaaagcaagacatctaaagatttgtgaggactttgggaagattaagaat 18227449  T
Q  255 gaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaa 354  Q
    |||||||||||||  |||  ||| || || | |||||| ||||||||||||||||| |||||||| ||| |||| || ||| ||| | ||||||||||||    
T  18227448 gaagattcaagagacctcataaggcattacagagggagaaattatgttcccaagttccaagacatcttatatgg-aagaaaaacccataaagatgaagaa 18227350  T
Q  355 ac 356  Q
    ||    
T  18227349 ac 18227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 149 - 364
Target Start/End: Complemental strand, 26253411 - 26253197
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc 248  Q
    ||||| ||||||| |||||||||||||||||||||| ||| ||||  ||||||| ||| | |  ||||||||||| |||||| | |||  | |||||||     
T  26253411 aaacatagcaattttagggtgttttgatgtaattcacgaaaaaatcatgcaaatcggctaggttagacatctgaagaattgtaaggac--taggaagatg 26253314  T
Q  249 at-gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaaga 347  Q
    |  |||||||||||||||||  ||| ||||| | || | |||||||||| |||||||||||||  ||||||| ||| ||||||  |||||||||||||||    
T  26253313 aaagaatgaagattcaagagccctcagaagatattacagagggaggaatgatgttcccaagttataagacatcttatatggaagtaaacacctaaaaaga 26253214  T
Q  348 tgaagaaacatacattt 364  Q
     ||||||||||||||||    
T  26253213 cgaagaaacatacattt 26253197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 176 - 364
Target Start/End: Complemental strand, 24188803 - 24188615
Alignment:
Q  176 tgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcgga 275  Q
    ||||||||| ||||| ||  |||| ||||||||||||| ||||||||| | |||||||| || ||||||||| | ||||||||||||||||||  || ||    
T  24188803 tgtaattcacgaagacatcatgcatattggcaaagcaatacatctgaagatttgtgaagtccatgggaagatgaagaatgaagattcaagaggcttcaga 24188704  T
Q  276 agacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattt 364  Q
    ||||  || | | |||| |||||||||||||||||  || |||| ||||||  || |||||||||||||||  ||||||||||||||||    
T  24188703 agacgttacatatggagaaattatgttcccaagttcgaacacatcttacatataagcaaacacctaaaaaggcgaagaaacatacattt 24188615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 141 - 376
Target Start/End: Complemental strand, 17831643 - 17831408
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||| ||||| ||||||| |||||||||||||| || ||||  |||||||  |||||||  |||||| ||||||||| |  | |||||||| | |||    
T  17831643 ttttcccaaaacatagcaattttagggtgttttgatatatttcacaaagaaatcatgcaaatctgcaaagtaagacatctaacgacttgtgaaggctttg 17831544  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||| || ||||||| ||||||||| ||  ||||| | || |||||| | |||| ||||| |||||  || ||||| ||  |||||| ||||||||     
T  17831543 ggaagataataaatgaaggttcaagaggccttagaagatattacaaagggggaaattttgttcgcaagtcccatgacatcttgtatggaagcaaacaccc 17831444  T
Q  341 aaaaagatgaagaaacatacatttacgtgcaagaaa 376  Q
    ||||||| |||||||||| |||||||||||| ||||    
T  17831443 aaaaagacgaagaaacatgcatttacgtgcaggaaa 17831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 156 - 364
Target Start/End: Complemental strand, 23266763 - 23266553
Alignment:
Q  156 gcaattctagggtgttttgatgtaattcatgaagaaattt-tgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcat-gaa 253  Q
    |||||| ||||||||||||||||| |||| ||| |||    ||||||| || ||| |||||||| |||| | |||| |||||||||||||||  |  |||    
T  23266763 gcaattttagggtgttttgatgtatttcacgaaaaaaaccatgcaaatcggaaaaacaagacatttgaagatttgttaagaccttgggaagaggagagaa 23266664  T
Q  254 tgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaaga 353  Q
    ||||||||||||| | ||  ||||||  || || |||| |||||||||||||||||| |||||||| ||| || |||||||||||| |||||||||||||    
T  23266663 tgaagattcaagatgccttagaagaccttacaaggggaagaattatgttcccaagttccaagacatcttatatagaaacaaacacccaaaaagatgaaga 23266564  T
Q  354 aacatacattt 364  Q
    ||||| |||||    
T  23266563 aacatgcattt 23266553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 143 - 346
Target Start/End: Original strand, 19761729 - 19761932
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| ||||||| |||| ||||||| ||||||||| ||||||||  |||| || ||  ||||||||||| |||| | ||| |||| |||||||    
T  19761729 ttcccaaaacatagcaattttaggatgttttgttgtaattcacgaagaaatcatgcatatcggttaagcaagacatatgaagatttgcgaagtccttggg 19761828  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| | ||| ||| |||||||||| ||| ||||||  || | |||||||||||||||||||||||| ||| ||||  ||| | ||| |||||||| ||    
T  19761829 aagatgaagaaagaatattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaaaacatcatacttagaagcaaacacccaa 19761928  T
Q  343 aaag 346  Q
    ||||    
T  19761929 aaag 19761932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 143 - 355
Target Start/End: Original strand, 17469706 - 17469918
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| ||||||| |||| |||||| || |||||||| ||||||||  ||||||| ||||||||||| |||| ||| |||| ||  | |||||     
T  17469706 ttcccaaaacatagcaattttaggatgtttttgaagtaattcacgaagaaatcatgcaaataggcaaagcaaggcatccgaagaattatgtggtccttga 17469805  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    |||||| |  ||||||||||||||||| |||  |||||  || |||||||||||||||||||||||| | |||||||| || ||   |||||||||||||    
T  17469806 gaagatgaaaaatgaagattcaagaggcctcataagactttacaaagggaggaattatgttcccaag-tccaagacatcttgcagaaaaacaaacaccta 17469904  T
Q  342 aaaagatgaagaaa 355  Q
    |||||  |||||||    
T  17469905 aaaaggcgaagaaa 17469918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 295
Target Start/End: Complemental strand, 28280225 - 28280077
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagaccttgggaaga 246  Q
    |||||| | ||||||||| |||||||||||||||||| ||||||||  ||||||| |||||||| | ||||| |||| | ||||||||| ||||||||||    
T  28280225 gaaacataacaattctagagtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcgaaacatcttgaagacttgtgaagatcttgggaaga 28280126  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaa 295  Q
     |||||||||||||||||  || ||||  ||||| || |||||||||||    
T  28280125 ccatgaatgaagattcaatgggcctcgacagacattacaaagggaggaa 28280077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 141 - 310
Target Start/End: Original strand, 24658446 - 24658616
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||  ||||||| |||||| |||| ||| ||||| |||||| ||||| ||    
T  24658446 ttttcccgaaacacaacaattttagggagttttgaagtaattcatgaagaaatcatgcaaatcggcaaatcaagaacaactgaagaattgtcaagacttt 24658545  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
     ||||||  | |||||||||||||||||| |||   ||||  || | ||| |||||||||||| |||||||    
T  24658546 aggaagacaaagaatgaagattcaagaggcctcaagagactttacataggaaggaattatgtttccaagtt 24658616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 26122248 - 26122142
Alignment:
Q  251 gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatga 350  Q
    ||||||||||||||||||| || ||||||  ||| |||| |||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||  ||    
T  26122248 gaatgaagattcaagaggtgtcagaagactttatgaaggaaggaattatgttcccaagttccaagaaaaattacatagaaacaaacacctaaaaaggcga 26122149  T
Q  351 agaaaca 357  Q
    |||||||    
T  26122148 agaaaca 26122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 18832173 - 18831974
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||| ||| | ||||| | ||||||||| ||||||||||||| ||||||||  ||||||| |||||||||| ||||| ||| | || ||  | ||||    
T  18832173 ttttcccaaaaaaaagcaaatatagggtgttcttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaatacatccgaagatttatgtcgtcctt 18832074  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||  | || ||||||||||||||| ||| ||||||  ||   ||||||||||||||||  |||||| |||||||| |||||| |||  |||||||    
T  18832073 gggaagacgaagattgaagattcaagaggcctcagaagacgttacggagggaggaattatgttatcaagttccaagacatcttacattgaagaaaacacc 18831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 356
Target Start/End: Original strand, 24849779 - 24849850
Alignment:
Q  285 aaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaac 356  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||  ||||||||    
T  24849779 aaagggaggaattatgttcccaagtttcaagacatcttacatagaagcaaacacctaaaaaggcgaagaaac 24849850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 26348379 - 26348284
Alignment:
Q  155 agcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatca 249  Q
    ||||||||||||||| ||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||| | | |||||||| ||||||||||||    
T  26348379 agcaattctagggtggttttgatgtaattcacgaagaaatcatgcaaattggaaaatcaagacatctgaagattagtgaagactttgggaagatca 26348284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 171 - 330
Target Start/End: Original strand, 24807369 - 24807529
Alignment:
Q  171 tttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    |||||||||||||| ||||||||| ||||||| ||||| |||| | |||| ||| | ||||||| | ||| |||||| |||||||||||||||||||||     
T  24807369 tttgatgtaattcaagaagaaattatgcaaatcggcaatgcaaaatatctagaagacttgtgaaaatcttcggaagaccatgaatgaagattcaagaggc 24807468  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaa 330  Q
    | | ||||| | || | ||||||| ||| ||||||||| |  |||||||| ||| ||||||    
T  24807469 cccagaagaaattacagagggagggattgtgttcccaaatcccaagacatcttatatggaa 24807529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 348
Target Start/End: Complemental strand, 25920781 - 25920575
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| | |||||| ||||||||||| |||||||||| ||||||||  |||||||||  ||| ||||| ||||  || | | || |||||||||    
T  25920781 ttcccgaaacataacaattccagggtgttttggatgtaattcacgaagaaatcatgcaaattgaaaaa-caagaacatccaaagattagtaaagaccttg 25920683  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||| ||||| |||||||||||||||||  |||  |||||  || | |||||| |||||||||||||  |  |||||||| ||| |||||| |||||| |     
T  25920682 ggatgatcaagaatgaagattcaagagacctcataagactttacagagggagaaattatgttcccagatcccaagacatcttatatggaagcaaacatcc 25920583  T
Q  341 aaaaagat 348  Q
    ||||||||    
T  25920582 aaaaagat 25920575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 24320668 - 24320798
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaag-caaga-catctgaaaaattgtgaagacc 237  Q
    ||||||||||||| | ||||| ||||||||||| || |||||||| ||||||||  ||||||| ||||||  ||||| |||||||  |||||| |||||     
T  24320668 ttttcccgaaacatatcaattttagggtgtttttgaagtaattcacgaagaaatcatgcaaatcggcaaaatcaagatcatctgacgaattgtcaagact 24320767  T
Q  238 ttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||| || ||||||||||||||||||    
T  24320768 ttgggaagaccaagaatgaagattcaagagg 24320798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 357
Target Start/End: Complemental strand, 26315085 - 26314955
Alignment:
Q  227 ttgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    ||||||||  ||||||||||| | |||||||||||||||||| |||  |||||  || |||||||| |||| |||||| ||||| |||| ||| ||||||    
T  26315085 ttgtgaagttcttgggaagatgaagaatgaagattcaagaggcctcataagactttacaaagggagaaattttgttcctaagttccaaggcattttacat 26314986  T
Q  327 ggaaacaaacacctaaaaagatgaagaaaca 357  Q
     ||| || ||||||||||| | |||||||||    
T  26314985 agaagcagacacctaaaaaaacgaagaaaca 26314955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 317
Target Start/End: Complemental strand, 18939471 - 18939294
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||| ||||| ||||||| ||||||||| ||||||||||||| ||||||||  ||||||| | |||||||||||||| ||| | || ||  | ||||    
T  18939471 ttttcccaaaacatagcaattttagggtgttcttgatgtaattcacgaagaaatcatgcaaatcgacaaagcaagacatccgaagatttatgtggtcctt 18939372  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagac 317  Q
    || ||||  | || |||| |||||||||| | | ||||||  || |||||||  |||| | |||||||||||||||||    
T  18939371 ggaaagacaaagattgaatattcaagaggccccagaagactttacaaagggacaaattttattcccaagtttcaagac 18939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 137 - 272
Target Start/End: Original strand, 25400878 - 25401015
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagg-gtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaag 234  Q
    ||||||||||||||||| ||||||| |||| | | ||||| |||||||||||||||||  |||||||  | ||| ||||| || | ||| | ||||||||    
T  25400878 ctaattttcccgaaacatagcaattttaggtgggatttgaagtaattcatgaagaaatcgtgcaaatcagaaaatcaagaacaaccgaagatttgtgaag 25400977  T
Q  235 accttgggaagatcatgaatgaagattcaagaggtctc 272  Q
    || ||||||| | || ||||||||||||||||||||||    
T  25400978 actttgggaataccaagaatgaagattcaagaggtctc 25401015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 23338855 - 23338719
Alignment:
Q  177 gtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcgga 275  Q
    |||||||| ||||||||  ||||||| |||||| ||||| |||||||| |||||||||| | ||||||||| || |||||||||||||||||  ||| |     
T  23338855 gtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattgtgaaggctttgggaagaccaagaatgaagattcaagagtcctcagg 23338756  T
Q  276 agacaatataaagggaggaattatgttcccaagtttc 312  Q
    ||||  || || |||||||||| ||||| ||| ||||    
T  23338755 agactttacaatgggaggaattttgttctcaaatttc 23338719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 19003911 - 19004039
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| | ||||| ||||| | |||||| |||||||| ||||||||  ||||||| |||||| |||| ||| ||||| ||||||||||| ||    
T  19003911 ttttcccgaaacataacaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacaactgaagaattgtgaaga-ct 19004009  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    |||||||| || | ||||||||| ||||||    
T  19004010 tgggaagaccaagcatgaagatttaagagg 19004039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 24265456 - 24265604
Alignment:
Q  172 ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtc 270  Q
    ||||||| ||||||||||||||  |||||||  |||||||||||||||||||| | || ||  | || |  |||||| | ||||||||| |||| ||| |    
T  24265456 ttgatgtgattcatgaagaaatcgtgcaaataaggcaaagcaagacatctgaagatttatgtggtccatatgaagatgaagaatgaagaatcaaaaggcc 24265555  T
Q  271 tcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    || ||||||  || ||||||||||||| ||||| |||||| ||||||||    
T  24265556 tcagaagactttacaaagggaggaattttgttcacaagttccaagacat 24265604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 24342087 - 24342235
Alignment:
Q  172 ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtc 270  Q
    ||||||| ||||||||||||||  |||||||  |||||||||||||||||||| | || ||  | || |  |||||| | ||||||||| |||| ||| |    
T  24342087 ttgatgtgattcatgaagaaatcgtgcaaataaggcaaagcaagacatctgaagatttatgtggtccatatgaagatgaagaatgaagaatcaaaaggcc 24342186  T
Q  271 tcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    || ||||||  || ||||||||||||| ||||| |||||| ||||||||    
T  24342187 tcagaagactttacaaagggaggaattttgttcacaagttccaagacat 24342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 29987907 - 29987779
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg-tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagac-atctgaaaaattgtgaagacct 238  Q
    ||||||||||||| | ||||| ||||| | |||||| ||| |||| ||||||||  ||||||| | |||| |||||| ||||||| | |||||||||| |    
T  29987907 ttttcccgaaacataacaattttaggggttttttgaagtacttcacgaagaaatcatgcaaatcgacaaatcaagaccatctgaagatttgtgaagactt 29987808  T
Q  239 tgggaagatcatgaatgaagattcaagag 267  Q
    |||||||| ||  ||||||||||||||||    
T  29987807 tgggaagaccaaaaatgaagattcaagag 29987779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 24162302 - 24162381
Alignment:
Q  285 aaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattt 364  Q
    |||||||||||||  ||||||||||| |||||||  |||||| | | ||||||||||||||| ||||||||||| |||||    
T  24162302 aaagggaggaatttcgttcccaagttccaagacaacttacataggagcaaacacctaaaaaggtgaagaaacatgcattt 24162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 357
Target Start/End: Complemental strand, 13693440 - 13693334
Alignment:
Q  252 aatgaagattcaagaggtctcggaagacaatataaag-ggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatga 350  Q
    ||||||||||||||||| |||| |||||| | ||||  |||||| || ||||| || ||  |||||||| ||| ||||||||||||||| ||||||| ||    
T  13693440 aatgaagattcaagaggcctcgaaagacattttaaaaaggaggagttttgttctcatgtcccaagacatcttatatggaaacaaacacccaaaaagacga 13693341  T
Q  351 agaaaca 357  Q
    |||||||    
T  13693340 agaaaca 13693334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 17336472 - 17336549
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacat 218  Q
    |||||| |||||| | |||||||||||||||||||||||||||| ||| ||||  ||||||| |||||| ||| ||||    
T  17336472 ttttcctgaaacatatcaattctagggtgttttgatgtaattcaagaataaatcatgcaaatcggcaaaacaaaacat 17336549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 24513332 - 24513461
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| | ||||| ||||| ||||| || |||||||| ||||||||  |||||||   |||| ||| | ||| |||| | |||||||||| |    
T  24513332 ttttcccgaaacatatcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcaacaaatcaaaaacatatgaagatttgtgaagactt 24513431  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||| ||| ||||||||||||||    
T  24513432 tgggaagatcaagaaagaagattcaagagg 24513461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 24261910 - 24261806
Alignment:
Q  253 atgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaag 352  Q
    |||||||||||||||| |||  |||||  || ||||||||| ||| |  ||||||||||||||| |  |||||| ||| |||||||||||||||  ||||    
T  24261910 atgaagattcaagaggcctcataagactttacaaagggaggtattctaatcccaagtttcaagaaaacttacatagaagcaaacacctaaaaaggcgaag 24261811  T
Q  353 aaaca 357  Q
    |||||    
T  24261810 aaaca 24261806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 15520896 - 15520797
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagc-aagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||| ||||||||  ||||||| |||||||| |||||||| ||| | |||||  |  ||||| ||||| || |||||||||||||||||    
T  15520896 ttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaaagacatcagaagatttgtgtggtacttggaaagatgataaatgaagattcaagagg 15520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 31600221 - 31600304
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttg--atgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaa 223  Q
    |||||||||| || ||||||| |||||||||||   |||||||| | ||||||||  ||||||| ||||||||||||||||||||    
T  31600221 ttttcccgaa-catagcaattttagggtgtttttttatgtaatttacgaagaaatcatgcaaatcggcaaagcaagacatctgaa 31600304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 265
Target Start/End: Original strand, 22797606 - 22797700
Alignment:
Q  172 ttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaag 265  Q
    |||| |||||||| ||||||||  ||||||| |||||| ||||| |||| ||| | ||||||| || || |||||| || |||||||||||||||    
T  22797606 ttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatccgaagatttgtgaaaactttcggaagaccaagaatgaagattcaag 22797700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 26122331 - 26122271
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaat 202  Q
    |||| |||||| ||||||| || |||||||| |||||||||||||| ||||| ||||||||    
T  26122331 ttcctgaaacatagcaattttaaggtgtttttgatgtaattcatgacgaaatcttgcaaat 26122271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 1e-42; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 25118014 - 25118230
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||| |||||| |||||||||| ||||||||||||||||||| ||||||||  ||||||| | |||||||| | || |||| |||||||||||| |||    
T  25118014 ttttcctgaaacatagcaattctaaggtgttttgatgtaattcaagaagaaatcatgcaaatcgacaaagcaaaatatttgaagaattgtgaagactttg 25118113  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||| ||||| |||||||| |||||| |  | |||||| || ||||||||||||| |||||||||||  |||||||| ||| ||||||  |||| |      
T  25118114 ggaagaccatgattgaagatttaagaggccatgaaagacattacaaagggaggaattttgttcccaagtcccaagacatcttatatggaaggaaacgcga 25118213  T
Q  341 aaaaagatgaagaaaca 357  Q
    |||||||||||||||||    
T  25118214 aaaaagatgaagaaaca 25118230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 157 - 377
Target Start/End: Original strand, 15046715 - 15046932
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    ||||||||| |||||||||||||||||| ||||||||   |||||| |||||||||||||||||||| | |||||||||| ||| |||||||||||||||    
T  15046715 caattctagtgtgttttgatgtaattcaggaagaaat---gcaaatcggcaaagcaagacatctgaagacttgtgaagactttgagaagatcatgaatga 15046811  T
Q  257 agattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaac 356  Q
    |||||||||||| |||  | || | || ||| ||||||||| | | |||||||  |||||||| ||| ||||||  ||||||  |||| |||||||||||    
T  15046812 agattcaagaggcctcatatgatattacaaaaggaggaattttttccccaagtcacaagacattttatatggaagaaaacacacaaaatgatgaagaaac 15046911  T
Q  357 atacatttacgtgcaagaaaa 377  Q
    |  |||||||||| |||||||    
T  15046912 aatcatttacgtgtaagaaaa 15046932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 157 - 377
Target Start/End: Complemental strand, 15107709 - 15107492
Alignment:
Q  157 caattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatga 256  Q
    ||||||||| |||||||||||||||||| ||||||||   |||||| |||||||||||||||||||| | |||||||||| ||| |||||||||||||||    
T  15107709 caattctagtgtgttttgatgtaattcaggaagaaat---gcaaatcggcaaagcaagacatctgaagacttgtgaagactttgagaagatcatgaatga 15107613  T
Q  257 agattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaac 356  Q
    |||||||||||| |||  | || | || ||| ||||||||| | | |||||||  |||||||| ||| ||||||  ||||||  |||| |||||||||||    
T  15107612 agattcaagaggcctcatatgatattacaaaaggaggaattttttccccaagtcacaagacattttatatggaagaaaacacacaaaatgatgaagaaac 15107513  T
Q  357 atacatttacgtgcaagaaaa 377  Q
    |  |||||||||| |||||||    
T  15107512 aatcatttacgtgtaagaaaa 15107492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 141 - 347
Target Start/End: Original strand, 19547198 - 19547404
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||||||||  ||||||| ||||||  || |||| |||| | |||||||||  |||    
T  19547198 ttttcccgaaacaaaacaattctagggtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaaataaaacatttgaagacttgtgaagattttg 19547297  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
      |||  |||||||||||||||||||||  |||||||||| || |||||||| |||||||||| ||||||||||||||| |||  ||||| |||||| |     
T  19547298 aaaagtccatgaatgaagattcaagaggcgtcggaagacattacaaagggagaaattatgttctcaagtttcaagacatcttatgtggaagcaaacatcc 19547397  T
Q  341 aaaaaga 347  Q
    |||||||    
T  19547398 aaaaaga 19547404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 143 - 356
Target Start/End: Original strand, 9849856 - 9850070
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| ||||||||  ||||||| |||||||||| | ||||  ||| ||| ||  | ||||||    
T  9849856 ttcccgaaacatagcaattttagggtgtttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaaaaacatcc-aaagattatgtggtccttgg 9849954  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccc-aagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||| | ||||||| |||||||||||||| ||||||  || ||||||||||||| ||||||| ||||| |||||||  |||||| |||||||||||||    
T  9849955 gaagataaagaatgaaaattcaagaggtctcagaagactttacaaagggaggaattctgttcccaaagttccaagacaacttacatagaaacaaacacct 9850054  T
Q  341 aaaaagatgaagaaac 356  Q
    |||||||  |||||||    
T  9850055 aaaaagacaaagaaac 9850070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 141 - 347
Target Start/End: Complemental strand, 10108197 - 10107992
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||| |||||| || |||| |||||||||||||||||||| | ||||||||  ||||||| | |||| | | |||| |||| | |||||||||| |||    
T  10108197 ttttccagaaacatagtaattatagggtgttttgatgtaattgaagaagaaatcatgcaaatcgacaaaacgaaacatttgaagatttgtgaagactttg 10108098  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||| |||||||||| || ||||||| ||| ||| ||| || ||||||||||||||| |||||||||  |||||||| ||| |||| || |||||||     
T  10108097 ggaagaccatgaatgaatatgcaagaggcctcagaaaacattacaaagggaggaattattttcccaagtcccaagacatcttatatgg-aagaaacaccc 10107999  T
Q  341 aaaaaga 347  Q
    |||||||    
T  10107998 aaaaaga 10107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 147 - 357
Target Start/End: Original strand, 18447592 - 18447802
Alignment:
Q  147 cgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||||| | ||||| ||||||||||| |||||||||| ||| ||||  ||||||| || ||||||||||||||||| | ||||||| || |||||||||    
T  18447592 cgaaacataacaattttagggtgttttaatgtaattcacgaacaaatcatgcaaatcggaaaagcaagacatctgaagacttgtgaaaactttgggaaga 18447691  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaag 346  Q
    ||| ||| |||||||||||||| ||  ||| ||| || | |||||| ||||||||||| | ||  |||||||| ||| |||||| | |||||| || |||    
T  18447692 tcaagaaggaagattcaagaggccttagaaaacattacagagggagaaattatgttcctaggtcccaagacatcttatatggaagctaacacccaacaag 18447791  T
Q  347 atgaagaaaca 357  Q
    | |||||||||    
T  18447792 acgaagaaaca 18447802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 16669869 - 16670066
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| ||||||| |||| ||||||| | ||| |||| ||| ||||  |||| || ||||||||||||||| ||||   |||||||||||||||    
T  16669869 ttcccaaaacaaagcaattttaggatgttttgttttaaattcacgaaaaaatcatgcatatcggcaaagcaagacatatgaaggtttgtgaagaccttgg 16669968  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||| | |||| ||||||||| ||| ||| ||||||  || ||||||||||||| |||||||||||| || ||||| |||||| ||| ||||||||    
T  16669969 gaagatgaagaattaagattcaaaaggcctcagaagacgttacaaagggaggaattttgttcccaagttccatgacatcttacatagaagcaaacacc 16670066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 149 - 377
Target Start/End: Complemental strand, 17661892 - 17661664
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||  ||||||| |||| | ||| ||||| |||| | ||||||||| | ||||||||     
T  17661892 aaacatagcaattctagggtgttttgatgtaattcaagaagaaatcatgcaaatcggcataacaaaacatcttgaagacttgtgaagatcatgggaagac 17661793  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaaga 347  Q
     |||||||| ||||||||||| |||  |||||| ||  | |||||||||| | || ||||||| ||||||||  || | ||||  |||||||  ||||||    
T  17661792 tatgaatgacgattcaagaggcctcataagacattactaggggaggaattctttttccaagttacaagacatcctataaggaaggaaacacc-caaaaga 17661694  T
Q  348 tgaagaaacatacatttacgtgcaagaaaa 377  Q
     ||||||||| |||||||| |||| |||||    
T  17661693 cgaagaaacaaacatttacctgcaggaaaa 17661664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 143 - 339
Target Start/End: Original strand, 1832203 - 1832398
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| | ||||||| || ||||||||||||||||| ||| ||||  ||||||| |||||||||| ||||||||| | ||||||| ||||||||    
T  1832203 ttcccgaaacataacaattcttgg-tgttttgatgtaattcacgaaaaaatcatgcaaatcggcaaagcaatacatctgaagacttgtgaaaaccttggg 1832301  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    ||||||| ||| ||| |||||||||| ||| ||||||| || | ||  |  ||||||| ||||| ||  |||||||| ||| |||||| ||||||||    
T  1832302 aagatcaagaaagaatattcaagaggcctcagaagacattacagagacataaattatgatcccaggtcacaagacatcttatatggaagcaaacacc 1832398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 17711257 - 17711086
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||| |||||| ||||| |    
T  17711257 ttttcccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattgtcaagactt 17711158  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    | |||||| || |||||||||||||||||| | |   ||||| || | ||||||||||||||||||||||||    
T  17711157 tcggaagaccaagaatgaagattcaagaggccccatgagacattacatagggaggaattatgttcccaagtt 17711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 166 - 323
Target Start/End: Complemental strand, 22346003 - 22345845
Alignment:
Q  166 ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagatcatgaatgaagattcaa 264  Q
    |||||| |||||||||||| ||||||||  |||||||||||||  ||| |||||| ||| | ||||||||| ||| |||||| |||| ||||||||||||    
T  22346003 ggtgttatgatgtaattcaagaagaaatcatgcaaattggcaatacaaaacatcttgaagacttgtgaagatcttaggaagaccatgcatgaagattcaa 22345904  T
Q  265 gaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatatta 323  Q
    |||| |||  |||||| || ||||||||||||| |||||||| ||| ||||| ||||||    
T  22345903 gaggcctcataagacattacaaagggaggaattttgttcccatgttccaagatatatta 22345845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 365
Target Start/End: Complemental strand, 9053950 - 9053732
Alignment:
Q  147 cgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaaga 246  Q
    ||||||| ||||||| |||||| |||||||||||| || ||||||||  |||||||  |||||| ||||||| |||| | | |||||||| |||||||||    
T  9053950 cgaaacatagcaattttagggtattttgatgtaatgcacgaagaaatcatgcaaatcagcaaagtaagacatttgaagattagtgaagactttgggaaga 9053851  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaag 346  Q
    ||| |||||| ||||||||||| ||  |||||   || | ||| || |||||||| |||| || ||||||||| ||| || ||| |||||||| | || |    
T  9053850 tcaagaatgatgattcaagaggccttagaagatgttacagaggaagaaattatgtccccaggtctcaagacatcttatatagaagcaaacacccagaagg 9053751  T
Q  347 atgaagaaacatacattta 365  Q
    | ||||||| ||| |||||    
T  9053750 acgaagaaatataaattta 9053732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 346
Target Start/End: Complemental strand, 23083649 - 23083446
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| | ||||| ||||| |||||| ||||||||| ||||||||   ||| || |   |||||||| || |||| | |||||||| |||||||    
T  23083649 ttccccaaacatatcaattttagggagttttgttgtaattcacgaagaaatcaggcatatcgattaagcaagatatatgaagatttgtgaagtccttggg 23083550  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| | |||||||||||||||||| ||||||||||  || | |||| | |||| |||| ||||||| |||||||| ||||||  ||||||||| | ||    
T  23083549 aagatgaagaatgaagattcaagaggcctcggaagacgttacagagggtgaaattttgtttccaagttccaagacatcttacataaaaacaaacatccaa 23083450  T
Q  343 aaag 346  Q
    ||||    
T  23083449 aaag 23083446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 155 - 344
Target Start/End: Complemental strand, 17434367 - 17434178
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaat 254  Q
    |||||||||||||| |||||||||| ||||  |||||||  || |||| |||||| |||||||||| || | | ||||| || |||||||||||| ||||    
T  17434367 agcaattctagggtattttgatgtatttcacaaagaaatcatgaaaatcggcaaaacaagacatctaaagattagtgaaaactttgggaagatcaagaat 17434268  T
Q  255 gaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    |||| ||||| ||| |||| ||||   || | |||||| |||||||||| ||  |  |||||||| ||| |||||| |||||||||||||    
T  17434267 gaagtttcaaaaggcctcgaaagatgttacagagggagaaattatgttctcagatcccaagacatcttatatggaagcaaacacctaaaa 17434178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 8140383 - 8140299
Alignment:
Q  163 tagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||| |||| | |||||||||  ||||||||||    
T  8140383 tagggtgttttgatgtaattcacgaagaaatcttgctaattggcaaagtaagacatttgaagacttgtgaagattttgggaagat 8140299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 212 - 344
Target Start/End: Complemental strand, 15047652 - 15047520
Alignment:
Q  212 aagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagttt 311  Q
    |||||||||||| | | || ||||| |||||||||||| |||||||||||||||||| |||| |||||  ||  ||||||| | ||| ||||||||||      
T  15047652 aagacatctgaatattagtcaagactttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcc 15047553  T
Q  312 caagacatattacatggaaacaaacacctaaaa 344  Q
    |||||||| ||| |||||| |||||||| ||||    
T  15047552 caagacatcttatatggaagcaaacacccaaaa 15047520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 212 - 344
Target Start/End: Original strand, 15106772 - 15106904
Alignment:
Q  212 aagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagttt 311  Q
    |||||||||||| | | || ||||| |||||||||||| |||||||||||||||||| |||| |||||  ||  ||||||| | ||| ||||||||||      
T  15106772 aagacatctgaatattagtcaagactttgggaagatcaagaatgaagattcaagaggcctcgaaagactttaccaagggagaagttacgttcccaagtcc 15106871  T
Q  312 caagacatattacatggaaacaaacacctaaaa 344  Q
    |||||||| ||| |||||| |||||||| ||||    
T  15106872 caagacatcttatatggaagcaaacacccaaaa 15106904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 303
Target Start/End: Complemental strand, 14573398 - 14573236
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||||  |||||||  ||||||| | |||||||||| |||| ||| | | ||||||| |||     
T  14573398 ttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaatcgtcaaagcaagaacatccgaagattagtgaagatctta 14573299  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    ||||||||| ||||||||||| ||||||  || ||||||  |||| |||||| |||| |||||    
T  14573298 ggaagatcaagaatgaagatttaagaggcttcagaagactttatagagggagaaattttgttc 14573236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 22217140 - 22217334
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| | || ||||||||||||||||||||||||| ||||| ||  ||||||| |  |||||||    | |||| | || |||||| ||||    
T  22217140 ttttcccgaaacatatcagttctagggtgttttgatgtaattcaagaagatatcatgcaaatcgataaagcaaatattttgaagatttttgaagatcttg 22217239  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaa 335  Q
     ||||| |  |||||||||||||| ||| |||| |||||| || ||||| ||||||| | |||||||||  |||||||  ||| |||||| ||||    
T  22217240 tgaagacctcgaatgaagattcaataggcctcgtaagacattacaaaggaaggaatttttttcccaagtcccaagacaacttagatggaagcaaa 22217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 344
Target Start/End: Original strand, 26114377 - 26114551
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    ||||||||||||| | ||||||||| ||||||| |||||| ||| ||||| ||| | || ||  | ||||   ||||| | ||||||||||||||||||     
T  26114377 ttttgatgtaattaacgaagaaattatgcaaatcggcaaaacaaaacatccgaagatttatgtggtccttaaaaagatgaagaatgaagattcaagaggc 26114476  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    |||  |||||  || ||| ||| ||||| |||||||||||| ||||||||||||||   |||||||||| |||||    
T  26114477 ctcaaaagactttacaaatggatgaattttgttcccaagttccaagacatattacacaaaaacaaacacttaaaa 26114551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 169 - 364
Target Start/End: Complemental strand, 22527868 - 22527674
Alignment:
Q  169 gttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat-catgaatgaagattcaagag 267  Q
    |||||| ||||||||||||| ||||  ||||||| |||||||||||||||||||| | |||||||||| |||| || ||  | |||||||||||||||||    
T  22527868 gttttgttgtaattcatgaaaaaatcatgcaaatcggcaaagcaagacatctgaagatttgtgaagacattggaaaaataaaagaatgaagattcaagag 22527769  T
Q  268 gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattt 364  Q
    | |||  || ||  || ||||||| ||||| ||  | || ||||||||||||  || |||||| |||| ||| ||||||| ||| | ||| ||||||    
T  22527768 gcctcaaaatacgttacaaagggaagaattttg--ctcatgtttcaagacatcgtatatggaagcaaatacccaaaaagacgaaaacacaaacattt 22527674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 20828285 - 20828364
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc 219  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  20828285 ttttcccgaaacatagcaattttagggcgttcttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacatc 20828364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 146 - 344
Target Start/End: Complemental strand, 25025052 - 25024853
Alignment:
Q  146 ccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaa-gacatctgaaaaattgtgaagaccttgggaa 244  Q
    |||||||| || |||| ||||||||||| |||||||||| ||||||||  ||||||| |||||| ||  |||||| ||| | || ||  |   | |||||    
T  25025052 ccgaaacatagtaattttagggtgtttttatgtaattcacgaagaaatcatgcaaatcggcaaaacattgacatccgaagatttatgtggttttcgggaa 25024953  T
Q  245 gatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    ||| | |||||||||||||||||| |||  |||||  || ||||||| ||| |||||||| ||||| |||||||  ||| || ||| |||||||||||||    
T  25024952 gatgaagaatgaagattcaagaggcctcaaaagactttacaaagggaagaaatatgttccgaagttccaagacaacttatatagaagcaaacacctaaaa 25024853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 346
Target Start/End: Complemental strand, 10236527 - 10236334
Alignment:
Q  155 agcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattgg-caaagcaagacatctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||| ||||||||| |||| |||||||| ||||||||   ||||||  | ||| ||||||||| |||| | || ||  |||||||||||||| |  |    
T  10236527 agcaattttagggtgttgttgaagtaattcacgaagaaatcaagcaaatcagacaatgcaagacatttgaagatttatgtggaccttgggaagatgaata 10236428  T
Q  253 atgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaag 346  Q
    |||||||||||||| | ||| |||| |  || ||||| ||||||| ||||| |||||| |||||||| |||||| |||  |||||||| |||||    
T  10236427 atgaagattcaagatgcctcagaagtctttacaaaggaaggaattttgttctcaagttccaagacatcttacattgaagaaaacacctcaaaag 10236334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 310
Target Start/End: Complemental strand, 16928845 - 16928704
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||  ||||||| |||||  ||||| ||||| || | |||||||||| |||| |||| || ||||||||||||||||||    
T  16928845 ttttgaagtaattcacgaagaaatcatgcaaatcggcaagtcaagaacatctaaagatttgtgaagactttggcaagaccaagaatgaagattcaagagg 16928746  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
     ||| ||||||  || || || |||| ||||| |||||||||    
T  16928745 cctcagaagactttacaatggcaggagttatgctcccaagtt 16928704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 8968305 - 8968388
Alignment:
Q  227 ttgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||||||| ||||||||| || |||||||||||||||||  ||| ||||||  || |  |||||||||||||||||||||||    
T  8968305 ttgtgaagactttgggaagaccaagaatgaagattcaagagacctcagaagactttacagtgggaggaattatgttcccaagtt 8968388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 11782431 - 11782260
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||| |||||||| | ||||| ||||| ||||| || |||||||| ||||||||  | ||||| |||||| ||||| || | ||| | |||||||||| |    
T  11782431 tttttccgaaacataacaattttagggggtttttgaagtaattcacgaagaaatcattcaaatcggcaaatcaagaacaaccgaagatttgtgaagactt 11782332  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||| ||||  ||||||||||||||||| ||| | ||||  || |   ||||||||||||||||||||||    
T  11782331 tgggaacatcaataatgaagattcaagaggcctcaggagactttacagctggaggaattatgttcccaagtt 11782260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 330
Target Start/End: Complemental strand, 7613686 - 7613496
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagacctt 239  Q
    ||||| |||||||  |||||| | ||||||||||| || ||||| ||||||||  ||||||| |||||||||| ||||| |||| | |||||  ||  ||    
T  7613686 ttttctcgaaacatggcaattatggggtgttttgacgtgattcaagaagaaatcatgcaaatcggcaaagcaaaacatcttgaagacttgtgttgatatt 7613587  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaa 330  Q
    ||||| | ||||||| ||||||||||| | ||| ||||||| || ||| ||| ||||| | ||| |||||  ||| |||| ||| ||||||    
T  7613586 gggaaaaccatgaataaagattcaagacgcctcagaagacattacaaatggaagaattttattctcaagtcccaaaacatcttatatggaa 7613496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 264
Target Start/End: Complemental strand, 15166423 - 15166294
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaag 234  Q
    ||||||||||||||||| || |||| ||||| ||||| || |||||||| | | ||||  |||||||  ||||| ||||| |||||||| |||||| |||    
T  15166423 ctaattttcccgaaacataggaattttagggggtttttgaagtaattcacggaaaaatcatgcaaatcagcaaatcaagaacatctgaataattgtcaag 15166324  T
Q  235 accttgggaagatcatgaatgaagattcaa 264  Q
    |  ||||||||| || ||||||||||||||    
T  15166323 aatttgggaagaccaagaatgaagattcaa 15166294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 11512186 - 11512301
Alignment:
Q  155 agcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||||||||||||||| ||| |||| ||  |||||||  ||||||| ||||||| |||| |||| ||| | | |||||||| ||| |||||||| ||    
T  11512186 agcaattctagggtgtttttgatataatccacaaagaaatcatgcaaatcggcaaaggaagaacatccgaagactagtgaagacattgagaagatcaaga 11512285  T
Q  253 atgaagattcaagagg 268  Q
    ||| ||||||||||||    
T  11512286 atggagattcaagagg 11512301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 137 - 268
Target Start/End: Original strand, 19556680 - 19556804
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||||||| ||| ||| ||||| ||||||| |||||||| ||||||||  |||||||        |||| |||| |||| |||||||||||    
T  19556680 ctaattttcccgaaacatagctattttagggggttttgaagtaattcacgaagaaatcatgcaaat--------caagaacatatgaagaattgtgaaga 19556771  T
Q  236 ccttgggaagatcatgaatgaagattcaagagg 268  Q
    | ||||||||| || || |||||||| ||||||    
T  19556772 ctttgggaagaccaagactgaagatttaagagg 19556804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 11241047 - 11240989
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgca 199  Q
    ||||||||||||| || ||||||||| |||||||| |||||||| ||||||||| ||||    
T  11241047 ttttcccgaaacatagaaattctaggatgttttgaggtaattcaagaagaaattatgca 11240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 13588660 - 13588566
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggga 243  Q
    ||||| ||||||| ||||||||||||||||||| ||  |||||||  ||||||| | |||||| |||||||| || | ||||||| || ||||||    
T  13588660 aaacatagcaattatagggtgttttgatgtaatccacaaagaaatcatgcaaatcgacaaagctagacatctaaagacttgtgaatactttggga 13588566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 17335531 - 17335629
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagag 267  Q
    |||||| |||||||| ||||||||  ||||||| | |||| ||||| |||| ||| | |||||||||| ||||||||| || |||| ||||||||||||    
T  17335531 ttttgaagtaattcacgaagaaatcatgcaaatcgacaaatcaagaacatccgaagatttgtgaagactttgggaagaccaagaataaagattcaagag 17335629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 17277695 - 17277618
Alignment:
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    |||||| | ||||||||| |||||||| |||  |||||  || ||||||||||||| |||||||||||| ||||||||    
T  17277695 gaagataaagaatgaagactcaagaggcctcataagactttacaaagggaggaattttgttcccaagttccaagacat 17277618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 355
Target Start/End: Original strand, 20316342 - 20316540
Alignment:
Q  166 ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacat-ctgaaaaattgtgaagaccttgggaagatcatgaatg--------a 256  Q
    ||||||||||||||||||| ||||||||  ||||| |||||||| ||| |||| ||||| | |||||||||  |||| ||||  || ||||        |    
T  20316342 ggtgttttgatgtaattcaagaagaaatcatgcaacttggcaaaacaaaacattctgaagatttgtgaagatattggtaagactataaatgaagaaatga 20316441  T
Q  257 agattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    ||||||| ||||||||  |||||| |  ||||||| | ||| |||||||||||  ||||| |  ||| |||||| |||||||| |||||||| ||||||    
T  20316442 agattcacgaggtctcataagacatttcaaagggacggattttgttcccaagtcccaagataacttatatggaagcaaacacccaaaaagataaagaaa 20316540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 25096222 - 25096114
Alignment:
Q  169 gttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagag 267  Q
    ||||||| |||||||| ||||||||  |||||||  | ||| ||||| || || || |||||| ||||||||||||||| || |||||||||||||||||    
T  25096222 gttttgaagtaattcacgaagaaatcctgcaaatcagaaaatcaagaacaactcaagaattgtcaagaccttgggaaga-caagaatgaagattcaagag 25096124  T
Q  268 gtctcggaag 277  Q
    | ||| ||||    
T  25096123 gcctcagaag 25096114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 15166546 - 15166506
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  15166546 attattcttagcatgtttttcagtcattttcagtaggtttt 15166506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 19927067 - 19927135
Alignment:
Q  236 ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcc 304  Q
    |||||||||||| | ||||||||||| |||||| ||| |||||   || ||||||||||||||||||||    
T  19927067 ccttgggaagatgaagaatgaagatttaagaggcctcagaagattttacaaagggaggaattatgttcc 19927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 23975714 - 23975604
Alignment:
Q  227 ttgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |||||||||| |||||||||||| || ||| ||||||||||| |||  |||| | || | || ||| ||||||||||||| ||  || ||||| ||| ||    
T  23975714 ttgtgaagactttgggaagatcaagagtgacgattcaagaggcctcataagatattacagagagagaaattatgttcccaggtcccatgacatcttatat 23975615  T
Q  327 ggaaacaaaca 337  Q
    |||| ||||||    
T  23975614 ggaagcaaaca 23975604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 37741470 - 37741422
Alignment:
Q  219 ctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||| |||||| ||||||||||||||| || ||||||||||||||||||    
T  37741470 ctgaagaattgtcaagaccttgggaaga-caagaatgaagattcaagagg 37741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 10106373 - 10106333
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| | ||||||||||||| |||||    
T  10106373 attattcttagcatgtttttctgtcattttcagtaggtttt 10106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 12836215 - 12836295
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaa 223  Q
    |||||||| || | |||||  ||||||||||| | |||||||| |||||||  |||| || ||||||||||||||| ||||    
T  12836215 ttcccgaagcataacaatttaagggtgttttgttctaattcataaagaaatcatgcatatcggcaaagcaagacatttgaa 12836295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 12836307 - 12836371
Alignment:
Q  294 aattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacat 358  Q
    |||| |||||||||||| | |||||| ||| || ||| |||||||| ||||||| ||||||||||    
T  12836307 aattttgttcccaagttcctagacatcttatatagaagcaaacacccaaaaagacgaagaaacat 12836371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 17108669 - 17108573
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| || |||  |||||| |||||||| ||||||||  ||||||| ||| || |||| |||| |||| |||||||||||    
T  17108669 ttttcccgaaacatagcaattttatggggtttttgaagtaattcacgaagaaatcatgcaaatcggcgaatcaagaacatttgaagaattgtgaaga 17108573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17711384 - 17711344
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||||  |||||||||||||| |||||    
T  17711384 attattcttagcatgttttttagtcattttcagtaggtttt 17711344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 143 - 347
Target Start/End: Complemental strand, 20886817 - 20886613
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||||||||||  |||||| || || |||||||||||||||| ||||||||  ||||||| ||||||||||||||| |||| | |||||||||||||| |    
T  20886817 ttcccgaaacatggcaattttaaggcgttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacatatgaagatttgtgaagaccttgag 20886718  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| | |||||||||| ||||||| |||  |||||| || |||||||  |||| | |||||||||| |||||||| ||| |||||| |||||||||||    
T  20886717 aagatgaagaatgaagatccaagaggcctcataagacattacaaagggattaattttattcccaagttccaagacatcttatatggaagcaaacacctaa 20886618  T
Q  343 aaaga 347  Q
    |||||    
T  20886617 aaaga 20886613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 148 - 355
Target Start/End: Original strand, 27853068 - 27853276
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    |||||| ||||||| |||| | ||||| ||||||||||||||||||  |||| || ||||||||||||||| |||| | ||||||||||||| |||||||    
T  27853068 gaaacatagcaattttaggatattttgttgtaattcatgaagaaatcatgcatatcggcaaagcaagacatatgaagatttgtgaagaccttaggaagat 27853167  T
Q  248 -catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaag 346  Q
      | |||||||||||||||||| ||| ||| ||  || | ||| ||||| ||||||| |||||| |||||||| ||| |||||| |||||||| ||||||    
T  27853168 gaaagaatgaagattcaagaggcctcagaatacgttacagaggtaggaaatatgttctcaagttccaagacatcttatatggaagcaaacacccaaaaag 27853267  T
Q  347 atgaagaaa 355  Q
    | |||||||    
T  27853268 acgaagaaa 27853276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 372
Target Start/End: Complemental strand, 26092854 - 26092623
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||| |||||||| |||||||||| ||||||||||||||||||| ||||||||  ||||||| || ||||||| |||| ||| || ||||||| || |||    
T  26092854 tttttccgaaacatagcaattctatggtgttttgatgtaattcaagaagaaatcatgcaaatcggtaaagcaaaacatttgataacttgtgaacactttg 26092755  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||    ||||||||||||||||| | || |||||||| || |||||||| |||| | || |||| |  |||||||| ||| |||||| ||||| ||     
T  26092754 ggaaggcactgaatgaagattcaagaagccttggaagacattacaaagggagaaattctttttccaaatcccaagacatcttatatggaagcaaacgccc 26092655  T
Q  341 aaaaagatgaagaaacatacatttacgtgcaa 372  Q
    ||||| ||||| ||||| ||| ||||| ||||    
T  26092654 aaaaatatgaaaaaacagacaattacgcgcaa 26092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 198 - 359
Target Start/End: Original strand, 25530931 - 25531093
Alignment:
Q  198 caaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaat 296  Q
    ||||| |||||||||| |||||| ||| | ||||||||| |||||||||||||||||||||||||||||||| || | |||||| || |||| |||||||    
T  25530931 caaatcggcaaagcaaaacatctcgaagacttgtgaagatcttgggaagatcatgaatgaagattcaagaggccttgtaagacattacaaagagaggaat 25531030  T
Q  297 tatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacata 359  Q
    |||||||| ||||  ||||| || ||| ||||||| ||||||| ||||||| |||| ||||||    
T  25531031 tatgttcctaagtcccaagatatcttatatggaaagaaacaccaaaaaagacgaagtaacata 25531093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 170 - 339
Target Start/End: Original strand, 23054752 - 23054921
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    ||||||||||||||| ||||||||  || |||| || |||||||||||||| || | || |||||||  ||||||||||| ||||||||||||||||||     
T  23054752 ttttgatgtaattcacgaagaaatcatgtaaatcggaaaagcaagacatctaaagacttatgaagactctgggaagatcaagaatgaagattcaagaggc 23054851  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||  |||| | || |||||||||||||||||||| ||||  |||||||| ||| |||||| ||||||||    
T  23054852 ctcaaaagaaattacaaagggaggaattatgttcctaagtcccaagacatcttatatggaagcaaacacc 23054921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 355
Target Start/End: Original strand, 28326282 - 28326494
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| ||  ||| |||||||||||||||||||| | ||||||||  ||||||| ||||| |||||||||||||| |    |||||||||||||    
T  28326282 ttcccgaaacatagttattttagggtgttttgatgtaattgacgaagaaatcatgcaaatcggcaatgcaagacatctgaagagggttgaagaccttggg 28326381  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| | ||||||| |||||||| | |||  ||| |  || | || |||||||| | |||||||||| |||||||| ||| |||||| |||||||| ||    
T  28326382 aagatgaagaatgaatattcaagatgcctcataaggctttacagagagaggaattttattcccaagttccaagacatcttatatggaagcaaacacccaa 28326481  T
Q  343 aaagatgaagaaa 355  Q
    ||||| |||||||    
T  28326482 aaagacgaagaaa 28326494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 139 - 326
Target Start/End: Original strand, 3114853 - 3115041
Alignment:
Q  139 aattttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacc 237  Q
    ||||||||||||||| ||||||| ||||||||| ||||||| ||||| ||||||||  ||||||| | ||||||||||||| |||| | || ||  | |     
T  3114853 aattttcccgaaacatagcaattttagggtgttcttgatgttattcacgaagaaatcatgcaaatcgacaaagcaagacatatgaagatttatgttgtca 3114952  T
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |||||||||  | ||   ||||||||||||| ||| ||||||  || | |||||||||||||||||||||||| |||||||| ||||||    
T  3114953 ttgggaagacaaagatataagattcaagaggcctcagaagacgttacagagggaggaattatgttcccaagttccaagacattttacat 3115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 344
Target Start/End: Original strand, 5270961 - 5271156
Alignment:
Q  150 aacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaagatc 248  Q
    |||| ||||||| ||||||||||| || ||||||| ||||||||  |||  |||||||| |||| |||||| ||| | |||| |||| |||||||||| |    
T  5270961 aacatagcaattgtagggtgttttaatataattcaagaagaaatcatgctgattggcaatgcaaaacatcttgaagagttgtaaagatcttgggaagacc 5271060  T
Q  249 atgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    |||||||||||||||||||   ||  |||| | || ||||||||||||||||||| ||||| | ||||||| ||| ||||||  ||||||| ||||    
T  5271061 atgaatgaagattcaagagacatcataagaaattacaaagggaggaattatgttctcaagtcttaagacatcttatatggaaggaaacacccaaaa 5271156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 3003007 - 3002884
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagacctt 239  Q
    |||||| |||||| |||||||||| ||||||||||||||||||| ||||||||  ||||||| |||||||||| ||||| |||| | ||||||||| |||    
T  3003007 ttttcctgaaacatagcaattctacggtgttttgatgtaattcaagaagaaatcatgcaaatcggcaaagcaaaacatcatgaagacttgtgaagatctt 3002908  T
Q  240 gggaagatcatgaatgaagattcaa 264  Q
     |||||| | | |||||||||||||    
T  3002907 -ggaagaccgtaaatgaagattcaa 3002884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 324
Target Start/End: Original strand, 20891790 - 20891973
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||| ||||| ||||||| ||||||||| |||| |||||||| ||||||||   ||||||| |||||| ||||||||  ||| | || ||  |||||||    
T  20891790 ttcccaaaacatagcaattttagggtgttcttgaggtaattcacgaagaaatcaagcaaattaggcaaaacaagacattcgaagatttatgtggaccttg 20891889  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattac 324  Q
     |||||| | |||||||||||||||||| ||| ||||||  || | ||| || |||| ||||||||||||||||||||| ||||    
T  20891890 tgaagatgaagaatgaagattcaagaggcctcagaagactttacagaggaagaaattttgttcccaagtttcaagacatcttac 20891973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 326
Target Start/End: Complemental strand, 5510020 - 5509834
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| ||||||| |||| |||| ||||||||||||| ||||||||  ||||||| || |||||||||||||  || | || ||  | ||||    
T  5510020 ttttcccgaaacatagcaattttaggatgttcttgatgtaattcacgaagaaatcatgcaaatcggaaaagcaagacatcccaagatttatgtggtcctt 5509921  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |||||||  | || ||| ||||||||||| |||  |||||  || | ||||||||||| ||||| |||||||||||| || ||||||    
T  5509920 gggaagacaaagattgacgattcaagaggcctcataagacgttacagagggaggaattttgttctcaagtttcaagatatcttacat 5509834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 6075883 - 6075725
Alignment:
Q  179 aattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaaga 278  Q
    |||||| ||||||||  |||| || ||||| |||||||||| ||| |  |||||||| ||||||||||| | |||||||||||||||||| ||| | ||     
T  6075883 aattcacgaagaaatcatgcatataggcaatgcaagacatccgaagatctgtgaagatcttgggaagatgaagaatgaagattcaagaggcctcaggagg 6075784  T
Q  279 caatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    || |||||||||||||||| | ||| | |||| || ||||| |||||| ||| ||||||    
T  6075783 cattataaagggaggaattctattctcgagttccaggacatcttacatagaagcaaaca 6075725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 23637563 - 23637438
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    |||||| |||| | ||||||||||||||||||| ||||||||||| ||| ||||  || |||| | |||| ||||||||||||| |   |||||||| ||    
T  23637563 ttttcctgaaatatagcaattctagggtgtttttgatgtaattcacgaataaatcatggaaatcgacaaatcaagacatctgaagatcagtgaagacttt 23637464  T
Q  240 gggaagatcatgaatgaagattcaag 265  Q
    |||||||||| |||||||||||||||    
T  23637463 gggaagatcaagaatgaagattcaag 23637438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 143 - 310
Target Start/End: Original strand, 13906731 - 13906899
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| ||||||| |||| ||||||| ||||| ||||  |||||||  |||| || ||||||  ||||||||||||   || ||| | ||||||    
T  13906731 ttcccgaaacatagcaattttaggatgttttgttgtaaattcacaaagaaatcatgcatatcggcaaactaagacatctgaaggtttatgaggtccttgg 13906830  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||| | ||||| |||||||||||| |||  |||||  ||  |||||||||||||||||||||||||    
T  13906831 gaagataaagaatggagattcaagaggcctcataagactttactaagggaggaattatgttcccaagtt 13906899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 357
Target Start/End: Original strand, 819993 - 820208
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaat-tcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||||||||| ||||||| |||| || |||| |||||  ||| ||||||||  |||| || | |||||||||||||||||| | ||| |||  ||||||    
T  819993 ttcccgaaacatagcaattttaggatgatttgttgtaaaatcaagaagaaatcatgcatatcgacaaagcaagacatctgaagatttgggaaatccttgg 820092  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
     ||||| | |||| ||||||||||||| |||  |||||  || | ||||||||||| |||||| ||||| || ||||| |||||  ||| ||||||||      
T  820093 aaagatgaagaattaagattcaagaggcctcaaaagacgttacagagggaggaattttgttccaaagttccatgacatcttacagagaagcaaacacccg 820192  T
Q  342 aaaagatgaagaaaca 357  Q
    |||| | |||||||||    
T  820193 aaaacacgaagaaaca 820208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 150 - 336
Target Start/End: Original strand, 18735425 - 18735612
Alignment:
Q  150 aacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc 248  Q
    |||| ||||||| |||| |||| |||||||||||||  |||||||  |||||||  |||| |||||||||| ||| | || ||  | |||||| ||||      
T  18735425 aacatagcaattttaggttgttcttgatgtaattcacaaagaaatcatgcaaatcagcaatgcaagacatccgaagatttatgtggtccttggaaagaag 18735524  T
Q  249 atgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaac 336  Q
    | |||||||||||||||||  ||| ||||||  || | ||||||||||| |||||||||||| |||||||| |||||| ||| |||||    
T  18735525 aagaatgaagattcaagagccctcagaagactttacagagggaggaattctgttcccaagttccaagacatcttacattgaagcaaac 18735612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 22470648 - 22470766
Alignment:
Q  237 cttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaac 336  Q
    ||||||||||| | |||||||||||||| ||| ||| ||||||   | ||||||||||||| ||||||||||||  ||||||| |||||  ||| |||||    
T  22470648 cttgggaagatgaagaatgaagattcaataggcctcagaagacttcacaaagggaggaattttgttcccaagttcgaagacatcttacaaagaagcaaac 22470747  T
Q  337 acctaaaaagatgaagaaa 355  Q
    ||||||||||  |||||||    
T  22470748 acctaaaaaggcgaagaaa 22470766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 2166180 - 2166310
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg--tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacc 237  Q
    ||||||||||||| ||||||| |||||  | |||||| |||||||| ||||||||  |||||||||||||| |||| ||||| ||| | ||||||| ||     
T  2166180 ttttcccgaaacatagcaattttaggggtttttttgaagtaattcacgaagaaatcatgcaaattggcaaatcaagaacatccgaagatttgtgaatact 2166279  T
Q  238 ttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||| |  || |||||||||||||||    
T  2166280 ttgggaagaccgagagtgaagattcaagagg 2166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 19912500 - 19912362
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||||||||||||  |||||||||||||| |||| || |||||| |||||  ||||| ||  ||||| || ||| ||||||||||||||    
T  19912500 ttttgaagtaattcatgaagaaatcatgcaaattggcaaatcaagaacgtctgaagaattgccaagactttaagaagaccaagaacgaagattcaagagg 19912401  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaa 307  Q
     ||| ||||||  || | ||||| ||||| |||||||||    
T  19912400 cctctgaagactttacatagggaagaattttgttcccaa 19912362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 344
Target Start/End: Complemental strand, 22246918 - 22246744
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggt 269  Q
    ||||||||||||||| ||||||||  || | || |||||||||||| |||  || | |||| |||  ||||||||||| | ||||||||||| |||||      
T  22246918 ttttgatgtaattcacgaagaaatcatgtatatcggcaaagcaagatatccaaagatttgttaagttcttgggaagatgaagaatgaagatttaagagac 22246819  T
Q  270 ctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    |||  |||||  || ||| ||||||||| || |||||| || |||||||| |||||| ||| ||||||| |||||    
T  22246818 ctcaaaagactttacaaaaggaggaattctgctcccaaattccaagacatcttacatagaagcaaacacttaaaa 22246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 16242337 - 16242466
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||| |||||||| ||||||| ||||| | ||||||  ||||||| ||||||||  |||||||||||||  ||||| |||| ||| | |||||||||| |    
T  16242337 ttttgccgaaacatagcaattttaggggggttttgaattaattcacgaagaaatcatgcaaattggcaagtcaagaacatccgaagatttgtgaagactt 16242436  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    |||||||| || |||| |||||||||||||    
T  16242437 tgggaagaccaagaattaagattcaagagg 16242466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 8145199 - 8145028
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| ||||| ||  ||||||| ||| ||||  ||||||| |||||| ||| | |||||||| |||||| ||||| |    
T  8145199 ttttcccgaaacatagcaattttagggggtttttgaaataattcacgaacaaatcatgcaaatcggcaaatcaataacatctgaagaattgtcaagactt 8145100  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    ||| |||||||  | | |||||||||||||  || | ||||  || | |||||||||||||||||| |||||    
T  8145099 tggaaagatcaaaactaaagattcaagaggcttcagtagactttacatagggaggaattatgttcctaagtt 8145028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 339
Target Start/End: Original strand, 18466843 - 18467042
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagacctt 239  Q
    ||||||||||||| || |||| || |||||||| |||||| | | ||| ||||  |||||||||||||||||| | ||| | || | | ||  |||  ||    
T  18466843 ttttcccgaaacatagaaattatatggtgttttaatgtaactaaagaaaaaataatgcaaattggcaaagcaaaatatcattaagactagtttagatatt 18466942  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||  |||||  ||||||||||||| ||| ||||||  || |||||||| |||| |||||||||||  ||| |||| ||| |||||| ||||||||    
T  18466943 gggaagactatgaacaaagattcaagaggactcagaagactttaaaaagggagtaattttgttcccaagtaccaaaacatcttatatggaagcaaacacc 18467042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 353
Target Start/End: Original strand, 19387998 - 19388209
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| | ||||| || |||||| ||||||||||||| ||||||||  | ||||| || |||||||||||||  || | || ||  |  |||||    
T  19387998 ttcccaaaacatatcaattttatggtgttcttgatgtaattcacgaagaaatcattcaaatcgggaaagcaagacatccaaagatttatgtggtgcttgg 19388097  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    |||||| | |||||||| ||||| ||| ||| ||||||  || | | |||| ||||||||||||| ||| |||||||| | |||| ||| |||||||||     
T  19388098 gaagattaagaatgaagcttcaataggcctcagaagactttacagaaggagaaattatgttcccatgttccaagacatctaacattgaagcaaacacctg 19388197  T
Q  342 aaaagatgaaga 353  Q
    || || ||||||    
T  19388198 aacaggtgaaga 19388209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 31284531 - 31284608
Alignment:
Q  229 gtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||  |||||  || | |||||| |||||||||||||    
T  31284531 gtgaagaccttgggaatatcaagaatgaagattcaagaggtttcaaaagactttaaagagggagaaattatgttccca 31284608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 16223442 - 16223363
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc 219  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| ||||||||  || |||||| ||||||| ||||||    
T  16223442 ttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaatcatggaaattgacaaagcatgacatc 16223363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 22470422 - 22470461
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  22470422 ttattcttagcatgtttttcagtcattttcagtatgtttt 22470461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 31284052 - 31284125
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga 215  Q
    ||||| ||||| ||||||| ||||||||||| ||||||||| | ||||||||  ||||||| ||||||||||||    
T  31284052 ttcccaaaacatagcaattttagggtgtttttgatgtaattgacgaagaaatcatgcaaatcggcaaagcaaga 31284125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 310
Target Start/End: Original strand, 34276615 - 34276756
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||| ||||  ||||||| |||||| ||| | ||| |||| |||||| |||||  |||||||| || ||||||||| ||||||||    
T  34276615 ttttgaagtaattcacgaaaaaatcatgcaaatcggcaaatcaataacatatgaagaattgtcaagactgtgggaagaccaagaatgaagagtcaagagg 34276714  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
     ||| | ||||  || |  |||||||||| ||||||||||||    
T  34276715 cctcaggagactttacagtgggaggaattctgttcccaagtt 34276756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 7805819 - 7805775
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttttcatc 59  Q
    |||||||||||||||||| || |||||||||||||||||| ||||    
T  7805819 ttattcttagcatgtttttcaatcattttcagtatgttttacatc 7805775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 12771222 - 12771261
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  12771222 ttattcttagcatgtttttcagtcattttcagtatatttt 12771261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 356
Target Start/End: Complemental strand, 17135041 - 17134827
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggc-aaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| |||||||  |||||||| ||||||||||||| ||||||||   | |||| ||  ||||||| | ||| ||| | || ||  | | |||    
T  17135041 ttcccgaaacatagcaatttaagggtgttcttgatgtaattcacgaagaaatcaagaaaatcgggtaaagcaaaatatccgaagatttatgtggtctttg 17134942  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||| | |||||||||||||||||| |||  |||||  || | | ||||||||| |||||||||| | |||||||| |||||| |||  |||||| |    
T  17134941 ggaagatgaagaatgaagattcaagaggcctcataagactttagagatggaggaattctgttcccaag-tccaagacatcttacattgaagaaaacactt 17134843  T
Q  341 aaaaagatgaagaaac 356  Q
    ||| ||  ||||||||    
T  17134842 aaacaggggaagaaac 17134827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 15669439 - 15669549
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatc 248  Q
    ||||| ||||||| |||||||||| | |||||||||  |||||||  ||||||| | | ||||||||||||| || | || |||| ||||||| || ||     
T  15669439 aaacatagcaattttagggtgtttcgttgtaattcaaaaagaaatgatgcaaatcgacgaagcaagacatctaaagatttttgaacaccttggaaaaatg 15669538  T
Q  249 atgaatgaaga 259  Q
    | |||||||||    
T  15669539 aagaatgaaga 15669549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 304
Target Start/End: Complemental strand, 6292234 - 6292146
Alignment:
Q  216 catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcc 304  Q
    |||||||| | || || ||| ||||||| ||| | |||||||||||||||||| |||  || ||  |||| ||||||||||||||||||    
T  6292234 catctgaagatttttgcagaacttgggacgatgaagaatgaagattcaagaggcctcaaaatacgttatagagggaggaattatgttcc 6292146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 7208469 - 7208393
Alignment:
Q  145 cccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct 220  Q
    ||||||||| |||||||||| | |||||| ||||||||| | ||| ||||  ||||||||| |||||||| ||||||    
T  7208469 cccgaaacatagcaattctatgatgtttttgatgtaatttaagaaaaaatcatgcaaattgacaaagcaaaacatct 7208393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 11636200 - 11636259
Alignment:
Q  219 ctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagac 279  Q
    ||||| |||||| |||||||| |||||| || |||||||||||||||||| ||| ||||||    
T  11636200 ctgaagaattgtcaagaccttaggaaga-caagaatgaagattcaagaggcctcagaagac 11636259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 27073903 - 27073807
Alignment:
Q  141 ttttcccgaaacacagcaattctag-ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| ||| ||  |||||| |||||||| ||||||||  ||||||| |||||| |||| ||| | ||| |||||||||||    
T  27073903 ttttcccgaaacatagcaattttagcgggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacaaccgaagaattgtgaaga 27073807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 346
Target Start/End: Original strand, 24380501 - 24380705
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    ||||| ||||| ||||||| ||||||||| ||||||||||||||||| ||||  |||| ||  |||||| | |||||||||| | ||||||| |||||||    
T  24380501 ttcccaaaacatagcaattttagggtgttcttgatgtaattcatgaataaatcatgcatatcagcaaaggatgacatctgaagatttgtgaacaccttgg 24380600  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
     ||||| | |||||||||||||||||| ||| ||||||   | ||||  ||||||||||||||||||||  ||||||| |||||| ||| ||||||||||    
T  24380601 taagatgaagaatgaagattcaagaggcctcagaagacttcacaaagcaaggaattatgttcccaagttcaaagacatcttacatagaagcaaacaccta 24380700  T
Q  342 aaaag 346  Q
    |||||    
T  24380701 aaaag 24380705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 143 - 364
Target Start/End: Original strand, 24381474 - 24381696
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgg 241  Q
    |||||| |||| ||||||| ||||||||||| ||||||||||| ||||||||  ||||||| ||||||||||||| || ||| | ||  |  | |||||     
T  24381474 ttcccgtaacatagcaattttagggtgtttttgatgtaattcacgaagaaatcatgcaaatcggcaaagcaagacgtccgaagatttacgtggtccttgc 24381573  T
Q  242 gaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    |||||| | |||||||||||||||||  ||| ||||||| || ||||| ||||||| |||||||||||| |||||||| ||||||  ||  ||||||| |    
T  24381574 gaagatgaagaatgaagattcaagagtcctcagaagacattacaaaggaaggaattttgttcccaagttccaagacatcttacatataagaaaacaccca 24381673  T
Q  342 aaaagatgaagaaacatacattt 364  Q
    ||||||  ||||||||| |||||    
T  24381674 aaaagacaaagaaacatgcattt 24381696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 355
Target Start/End: Original strand, 15058652 - 15058863
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| ||||||| |||| | ||||| ||||||||||||||||||  || | ||  |||||||||||||||| || | ||||||| ||||||||    
T  15058652 ttcccaaaacatagcaattttaggatattttgttgtaattcatgaagaaatcatgtatatcagcaaagcaagacatctaaagatttgtgaaaaccttggg 15058751  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    || || | |||||||||||||||||||||| ||||||  || ||| |||| |||| |||||||||| ||| || ||| ||| |||||| |||||| | ||    
T  15058752 aaaatgaagaatgaagattcaagaggtctcagaagacgttacaaatggagaaattttgttcccaag-ttccaggcatcttatatggaagcaaacatccaa 15058850  T
Q  343 aaagatgaagaaa 355  Q
    ||||| |||||||    
T  15058851 aaagacgaagaaa 15058863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 339
Target Start/End: Complemental strand, 22501785 - 22501586
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| | ||||| ||||||||| ||||||||||||| ||| ||||  ||||||| |||||||||||||||| ||| | || ||  | ||||    
T  22501785 ttttcccgaaacataacaattttagggtgttcttgatgtaattcacgaataaatcatgcaaatcggcaaagcaagacatccgaagatttatgttgtcctt 22501686  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||  |  | ||||||||||||||| ||| ||||||| || | ||||||||||| |||||||||||| ||||| || |||||| |||  |||||||    
T  22501685 gggaagacgaatattgaagattcaagaggcctcagaagacattacagagggaggaattctgttcccaagttccaagatatcttacattgaagaaaacacc 22501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 141 - 326
Target Start/End: Complemental strand, 14271792 - 14271606
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagacctt 239  Q
    ||||||||||||| || |||| ||||||||| ||||||||||||| ||||||||  |||||||||||||||||||||||| ||| | |  ||  | ||||    
T  14271792 ttttcccgaaacatagaaattttagggtgttcttgatgtaattcacgaagaaatcatgcaaattggcaaagcaagacatccgaagattaatgtggtcctt 14271693  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    || ||||  | || ||||||||||| ||| ||| ||||||  || | ||||||||||||||||| |||||| |||||||| ||||||    
T  14271692 ggcaagacaaagattgaagattcaataggcctcagaagacgttacatagggaggaattatgttctcaagttccaagacatcttacat 14271606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 141 - 310
Target Start/End: Original strand, 15176578 - 15176748
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacctt 239  Q
    ||||||| ||||| ||||||| |||||  |||||| |||||||| ||||||||  ||||||| |||||| ||||| |||||||| |||||| ||||| ||    
T  15176578 ttttcccaaaacatagcaattttaggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaagaattgtcaagacttt 15176677  T
Q  240 gggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    |||||||  | |||||||||||||||||| ||| | ||||  || | ||||||||||| ||||||||||||    
T  15176678 gggaagacaaagaatgaagattcaagaggcctcaggagactttacatagggaggaattctgttcccaagtt 15176748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 347
Target Start/End: Complemental strand, 14077065 - 14076866
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaaga-t 247  Q
    ||||| ||||||| || ||||||||||||||||||||||||||||  ||||||| | ||| |||||||||||||| | |||||||||| | || |||| |    
T  14077065 aaacatagcaattttatggtgttttgatgtaattcatgaagaaatcatgcaaatcgacaatgcaagacatctgaagatttgtgaagacttgggcaagatt 14076966  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaaga 347  Q
     | |||||||||||||||||| ||  ||| | | || |||||||||||||  ||| |||| || |||||||| ||| || ||| |||||| | |||||||    
T  14076965 aaagaatgaagattcaagaggccttagaaaatattacaaagggaggaatttcgttaccaaattccaagacatcttatatagaagcaaacatcgaaaaaga 14076866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 357
Target Start/End: Original strand, 24518735 - 24518950
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||| |||||| | ||||| || |||||||| ||||||||||  |||||||  ||||||| ||||||  || ||| ||||| | |||||| ||| |||||    
T  24518735 ttcctgaaacataacaattttaaggtgttttcatgtaattcacaaagaaatcatgcaaatcggcaaaataaaacacctgaagatttgtgaggactttggg 24518834  T
Q  243 aagatcat-gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacaccta 341  Q
    ||||| |  ||||||||||| |||||| ||| ||||||| || | || ||||||||  ||||||||||| |||||||| ||| |||||| |||||||| |    
T  24518835 aagattaaagaatgaagatttaagaggcctcagaagacattacagagagaggaatttagttcccaagttccaagacatcttatatggaagcaaacaccca 24518934  T
Q  342 aaaagatgaagaaaca 357  Q
    |||||| ||| |||||    
T  24518935 aaaagacgaaaaaaca 24518950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 30487794 - 30487669
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||||| ||||| |||| ||||||| ||||||||| ||| ||||  |||| || |||||| ||||||||||| | | |||||||| |||||||    
T  30487794 ttcccgaaacacaacaattttaggatgttttgttgtaattcacgaaaaaatcatgcatatcggcaaaacaagacatctggagatttgtgaagcccttggg 30487695  T
Q  243 aagatcatgaatgaagattcaagagg 268  Q
    ||||| | ||||||||||||||||||    
T  30487694 aagatgaagaatgaagattcaagagg 30487669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 35861628 - 35861733
Alignment:
Q  161 tctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagat 260  Q
    ||||||||||||||||||||||||  |||||||  ||||||| |||||| ||| ||||||||| | |||||||||| |||  ||||||||||||||||||    
T  35861628 tctagggtgttttgatgtaattcacaaagaaatcatgcaaatcggcaaaacaaaacatctgaagatttgtgaagactttgaaaagatcatgaatgaagat 35861727  T
Q  261 tcaaga 266  Q
    ||||||    
T  35861728 tcaaga 35861733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 148 - 303
Target Start/End: Complemental strand, 20268333 - 20268177
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaaga 246  Q
    |||||| | ||||| |||||||||||||| ||| ||| ||||||||  ||| |||  ||||||||| |||||| ||| | |||| |||| ||||||||||    
T  20268333 gaaacataacaattttagggtgttttgatataagtcaagaagaaatcatgccaatcagcaaagcaaaacatcttgaagacttgtaaagatcttgggaaga 20268234  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    ||||||||||||||| |||||||| |  |||||| || ||||||||||||| |||||    
T  20268233 tcatgaatgaagatttaagaggtcacaaaagacattacaaagggaggaattttgttc 20268177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 148 - 303
Target Start/End: Complemental strand, 21054962 - 21054806
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaaga 246  Q
    |||||| | ||||| |||||||||||||| ||| ||| ||||||||  ||| |||  ||||||||| |||||| ||| | |||| |||| ||||||||||    
T  21054962 gaaacataacaattttagggtgttttgatataagtcaagaagaaatcatgccaatcagcaaagcaaaacatcttgaagacttgtaaagatcttgggaaga 21054863  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    ||||||||||||||| |||||||| |  |||||| || ||||||||||||| |||||    
T  21054862 tcatgaatgaagatttaagaggtcacaaaagacattacaaagggaggaattttgttc 21054806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 143 - 358
Target Start/End: Original strand, 24851093 - 24851297
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||| ||||| ||||||| |||| |||||||||||||||||  || ||||  ||||||| |||||||||||| ||||||||| ||          ||||    
T  24851093 ttcccaaaacatagcaattttaggatgttttgatgtaattcacaaataaatcatgcaaatcggcaaagcaagatatctgaaaactt----------tggg 24851182  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    |||||||||||||||||||||||||  ||| ||||||| || ||| |||  |||| |||||||  ||  |||||||| |||||||||| |||||| || |    
T  24851183 aagatcatgaatgaagattcaagagacctcagaagacattacaaaaggataaattttgttcccgggtcccaagacatcttacatggaagcaaaca-ctta 24851281  T
Q  343 aaagatgaagaaacat 358  Q
    ||||| ||||||||||    
T  24851282 aaagacgaagaaacat 24851297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 346
Target Start/End: Original strand, 30117812 - 30118008
Alignment:
Q  149 aaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| ||||||||| |||| |||||||| ||||||||  ||||||||||||||||||||||||  || | ||  |    ||||||||||||    
T  30117812 aaacatagcaattttagggtgttcttgaggtaattcacgaagaaatcatgcaaattggcaaagcaagacatccaaagatttacgtgatccttgggaagat 30117911  T
Q  248 catgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaag 346  Q
     | |||||||||||||||||| |||  |||||  |  ||||||||  ||| ||||| |||||| |||||||| |||||| ||| |||||||||||||||    
T  30117912 gaagaatgaagattcaagaggcctcaaaagactttgcaaagggag--attctgttctcaagttccaagacatcttacattgaagcaaacacctaaaaag 30118008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 344
Target Start/End: Complemental strand, 17980738 - 17980540
Alignment:
Q  147 cgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaag 245  Q
    ||||||| |||||||||||| |||||| ||||||||||| ||| ||||  ||||||| |||||| |||||||||| || |   |||||||| || || ||    
T  17980738 cgaaacatagcaattctaggatgtttttgatgtaattcacgaaaaaatcatgcaaatcggcaaatcaagacatctaaagatcagtgaagacatttggtag 17980639  T
Q  246 atcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
    |||| ||||||| |||||||||  |||  | | || || |||||||| |||| |||||||| || ||||||||| ||| |||||| |||||||| ||||    
T  17980638 atcaagaatgaatattcaagagacctcatagggcattacaaagggagaaattgtgttcccatgtctcaagacatcttatatggaagcaaacacccaaaa 17980540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 24389707 - 24389579
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg-tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| |||| || ||||| | |||||| |||||||| ||||||||  |||||||||||||| |||| ||||||||| ||||||||||| ||    
T  24389707 ttttcccgaaacatagcatttttaggggttttttgaagtaattcacgaagaaatcatgcaaattggcaaatcaagaacatctgaagaattgtgaaga-ct 24389609  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    | |||||| || ||||||||||||||||||    
T  24389608 taggaagaccaagaatgaagattcaagagg 24389579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 268
Target Start/End: Original strand, 13833750 - 13833877
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||| ||||| | |||||||| |||||||||||||||||||  || ||||  ||||| | |  ||||||||||||||||| | ||| |||||| |||    
T  13833750 ttttcccaaaacataacaattctaaggtgttttgatgtaattcacaaataaatcatgcaactcgataaagcaagacatctgaagacttgcgaagacgttg 13833849  T
Q  241 ggaagatcatgaatgaagattcaagagg 268  Q
    |||||| ||||| |||||||||||||||    
T  13833850 ggaagagcatgattgaagattcaagagg 13833877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 18836666 - 18836539
Alignment:
Q  230 tgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatgga 329  Q
    ||||||| |||||||||||||||||||| ||||||||||  ||| |||||| |  |||||||| ||||  ||||||||||   ||||||| ||| |||||    
T  18836666 tgaagactttgggaagatcatgaatgaatattcaagaggcgtcgaaagacattgcaaagggagcaatttcgttcccaagtcctaagacatcttatatgga 18836567  T
Q  330 aacaaacacctaaaaagatgaagaaaca 357  Q
    | |||||||| |||| ||||||||||||    
T  18836566 agcaaacacccaaaaggatgaagaaaca 18836539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 15557337 - 15557217
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||||||| || || |||| |||||||||||||||||||||| |||||||     | ||| | |||||||||||||| ||| | | |||||||| |||||    
T  15557337 ttcccgaaccatagtaattttagggtgttttgatgtaattcacgaagaaa-----ccaatcgacaaagcaagacatccgaagactcgtgaagactttggg 15557243  T
Q  243 aagatcatgaatgaagattcaagagg 268  Q
    |||||||||||||||| |||||||||    
T  15557242 aagatcatgaatgaaggttcaagagg 15557217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 24388517 - 24388650
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| ||||| || |||||||| ||||||||  ||||||| |||||| ||||| |||||||||||||||  |||| |    
T  24388517 ttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctgaaaaattgtctagactt 24388616  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctc 272  Q
    | |||||| ||  |||||||||| ||||||||||    
T  24388617 taggaagagcaaaaatgaagatttaagaggtctc 24388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 343
Target Start/End: Complemental strand, 7985062 - 7984863
Alignment:
Q  147 cgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttgggaa 244  Q
    ||||||| ||||||| ||||||||| |||| |||||||| ||||||||   ||||||  ||||||||||||||||  || | || || ||||||||| ||    
T  7985062 cgaaacatagcaattttagggtgttcttgaagtaattcacgaagaaatcaagcaaatcaggcaaagcaagacatccaaagatttatgcagaccttggaaa 7984963  T
Q  245 -gatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaa 343  Q
     ||| | ||||||||||||||||||  ||  |||||  || || ||||||||||||||||| ||||| |||||||| |||||| |||  ||||| |||||    
T  7984962 agatgaagaatgaagattcaagaggcatcataagactttacaatgggaggaattatgttccaaagttccaagacatcttacattgaagaaaacatctaaa 7984863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 28858757 - 28858659
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||| ||||||||  | || || |||||| ||||||||||||| | | |||||||| |||||||||||| ||||||| ||||||||||    
T  28858757 ttttgatgtaattcacgaagaaatcatacagatcggcaaatcaagacatctgaagattagtgaagactttgggaagatcaagaatgaatattcaagagg 28858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 155 - 364
Target Start/End: Original strand, 19784940 - 19785150
Alignment:
Q  155 agcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaa-gacatctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||| ||||||||||| ||||||||||| ||||||||  ||||||| | |||||||| ||||| |||| | || ||  | | |||||||||| | ||    
T  19784940 agcaattttagggtgtttttgatgtaattcacgaagaaatcatgcaaatcgacaaagcaaagacatgtgaaga-ttatgtggtcattgggaagatgaaga 19785038  T
Q  253 atgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaag 352  Q
    |||||||||||||||| |||  |||||  ||  | ||||| |||| ||||||||| || |||| ||  |||||| ||| ||||||||||| |||  ||||    
T  19785039 atgaagattcaagaggcctcataagactttacgacgggagaaattttgttcccaaattccaaggcaatttacatagaagcaaacacctaacaaggggaag 19785138  T
Q  353 aaacatacattt 364  Q
    ||||| ||||||    
T  19785139 aaacagacattt 19785150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 306
Target Start/End: Complemental strand, 30832890 - 30832723
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||| |||||||| ||||||| ||||  ||||| || |||||||| ||||||||  ||||||| |||||| ||||| ||||  || | | |||||||| |    
T  30832890 tttttccgaaacatagcaattttaggaggtttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatccaaagattcgtgaagactt 30832791  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
     |||||||||| ||||||||||| |||||  ||||| ||||  || ||||||||||||| ||||||||    
T  30832790 ggggaagatcaagaatgaagatttaagagacctcgggagactttacaaagggaggaattctgttccca 30832723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 310
Target Start/End: Original strand, 23868005 - 23868147
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||  |||||||  ||||| ||||| |||||||| |||| | ||||| ||||||||| || ||||||||||||||||||    
T  23868005 ttttgaagtaattcacgaagaaatcatgcaaatcagcaaatcaagaacatctgaagaattatcaagactttgggaagaccaagaatgaagattcaagagg 23868104  T
Q  269 tctcggaagacaatata-aagggaggaattatgttcccaagtt 310  Q
     ||| | ||||  || |  |||||||||||||||||| |||||    
T  23868105 gctcaggagactttacagtagggaggaattatgttccaaagtt 23868147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 5856703 - 5856595
Alignment:
Q  168 tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagag 267  Q
    ||||||| ||||||||| ||||||||  | || || | |||| ||||||||||||| | |||||||| | ||||| |||| | |||||||||||||||||    
T  5856703 tgttttgttgtaattcacgaagaaataatacatatcgacaaatcaagacatctgaagatttgtgaagtctttggggagatgaagaatgaagattcaagag 5856604  T
Q  268 gtctcggaa 276  Q
    | |||||||    
T  5856603 gcctcggaa 5856595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 310
Target Start/End: Original strand, 24520146 - 24520316
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||| ||||||| ||||||| ||||| ||||| || |||||||| ||| || |  ||||||| |||||| ||||| |||||||| ||||||||||| ||    
T  24520146 ttttctcgaaacatagcaattttagggggtttttgaagtaattcacgaataagtcatgcaaatcggcaaatcaagaacatctgaagaattgtgaaga-ct 24520244  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaa-gggaggaattatgttcccaagtt 310  Q
    | |||||| ||  ||||||||||||||| | ||  | |||| ||| ||| |||||||||||||||||||||||    
T  24520245 taggaagaccaaaaatgaagattcaagatgccttaggagac-atacaaatgggaggaattatgttcccaagtt 24520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 28904114 - 28904214
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||||| |||||| ||||||| || | ||||||||||||||||| ||| ||||  ||||||| ||||||||||||||  |||| | |||||||| |||||    
T  28904114 ttttcctgaaacatagcaattatatgatgttttgatgtaattcacgaacaaatcatgcaaatcggcaaagcaagacacttgaacacttgtgaaggccttg 28904213  T
Q  241 g 241  Q
    |    
T  28904214 g 28904214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 268
Target Start/End: Complemental strand, 17835492 - 17835366
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||| |||||| || |||| |||| ||||||| ||||||||| ||| ||||  |||| ||  | ||||||||||||||||| | |||||||| | |||||    
T  17835492 ttcctgaaacatagaaattttaggatgttttgttgtaattcacgaaaaaatcatgcatatcagtaaagcaagacatctgaagagttgtgaagtctttggg 17835393  T
Q  243 aagatcatgaa-tgaagattcaagagg 268  Q
    ||||| | ||| |||||||||||||||    
T  17835392 aagatgaagaattgaagattcaagagg 17835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 266
Target Start/End: Complemental strand, 17976180 - 17976062
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| |||| |||| ||||||||||||||||||||  |||||||  ||||||| ||||||| |  ||||| |||| | |||| |||| | |||||| |     
T  17976180 aaacatagcatttcttgggtgttttgatgtaattcaataagaaatcatgcaaatcggcaaagaagaacatcttgaagacttgtaaagatcgtgggaaaac 17976081  T
Q  248 catgaatgaagattcaaga 266  Q
    |||||||||||||||||||    
T  17976080 catgaatgaagattcaaga 17976062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 21230876 - 21230748
Alignment:
Q  141 ttttcccgaaacacagcaattctaggg-tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||||| |||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||||||| || ||| ||||| |||||||| | |||||||||  |    
T  21230876 ttttcctgaaacatagcaattttaggggttttttgaagtaattcacgaagaaatcatgcaaataggaaaatcaagaacatctgaagatttgtgaagat-t 21230778  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    | |||||| || ||||||||||||||||||    
T  21230777 taggaagaccaagaatgaagattcaagagg 21230748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 306
Target Start/End: Complemental strand, 18007481 - 18007328
Alignment:
Q  147 cgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaa 244  Q
    ||||||| |||||| |||||||||||| ||||||||||| ||||||||    || |    |||||||||| |||| ||| | | |||||||||||| |||    
T  18007481 cgaaacaaagcaatcctagggtgtttttgatgtaattcacgaagaaat----cata----caaagcaagaacatccgaagattagtgaagaccttgagaa 18007390  T
Q  245 gatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    |||||  ||||||||||||||||| ||| ||||||  || | |||||  |||||||||||||    
T  18007389 gatcaaaaatgaagattcaagaggcctctgaagactttacagagggataaattatgttccca 18007328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 34499153 - 34499074
Alignment:
Q  227 ttgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    |||||||||| |||||||||||| ||||| | |||||||||| ||| | | ||| || | ||||||||||||||||||||    
T  34499153 ttgtgaagactttgggaagatcaagaatggaaattcaagaggcctcaggaaacattacagagggaggaattatgttccca 34499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 17649752 - 17649683
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaag 210  Q
    ||||| ||||||| | |||||||||| ||||||||||||||| | ||||||||  ||||||| |||||||    
T  17649752 ttttctcgaaacatatcaattctaggatgttttgatgtaatttacgaagaaatcatgcaaatcggcaaag 17649683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 18822512 - 18822407
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||  |||||||||| ||| ||||| ||||  || | |||||||||| |||||||||  | ||||||||||| ||||||    
T  18822512 ttttgaagtaattcacgaagaaatcatgcaaattggaaaatcaagaacatccaaagatttgtgaagactttgggaagaataagaatgaagatttaagagg 18822413  T
Q  269 tctcgg 274  Q
     |||||    
T  18822412 cctcgg 18822407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 13833623 - 13833667
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttttcatc 59  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||    
T  13833623 ttattctttgcatgtttttcagtcattttcagtatgcttttcatc 13833667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 18447007 - 18447103
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgt-tttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    |||| |||||||| ||||||| ||||| || |||||  ||| ||| ||||||||  |||||||||||||| |||| ||||||||| |||||||||||    
T  18447007 ttttaccgaaacatagcaattttagggggtatttgaaataagtcaagaagaaatcatgcaaattggcaaatcaagaacatctgaagaattgtgaaga 18447103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 21316734 - 21316659
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga 215  Q
    ||||||||||||| ||||||| ||||| ||||| || |||||||| ||||||||  || ||||||||||| |||||    
T  21316734 ttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatggaaattggcaaatcaaga 21316659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 15557445 - 15557400
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttttcatc 59  Q
    |||||||||||  |||||| ||||||||||||||| ||||||||||    
T  15557445 attattcttagtctgtttttcagtcattttcagtaggtttttcatc 15557400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 17973559 - 17973486
Alignment:
Q  285 aaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacat 358  Q
    |||||||| |||| |||||||||||  |||||||| ||| |||||| ||||||||   ||| ||||||||||||    
T  17973559 aaagggagaaattttgttcccaagtcccaagacatcttatatggaagcaaacacccccaaaaatgaagaaacat 17973486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 13313469 - 13313565
Alignment:
Q  215 acatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagttt 311  Q
    ||||||||| ||||||||| |  ||||||||| || ||||||| |||||||||  |||  |||||  || || | |||||| |||||||||||||||    
T  13313469 acatctgaagaattgtgaatattttgggaagaccaagaatgaatattcaagagacctcaaaagactttacaatgtgaggaactatgttcccaagttt 13313565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17510982 - 17510942
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| |||||| |||||||| |||||    
T  17510982 attattcttagcatgtttttcagtcactttcagtaggtttt 17510942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 24091032 - 24091092
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaa 209  Q
    ||||| ||||||| ||||| | ||||| |||||||| ||||||||  ||||||||||||||    
T  24091032 aaacatagcaattttaggggggtttgaagtaattcacgaagaaatcatgcaaattggcaaa 24091092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 7e-35; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 143 - 358
Target Start/End: Complemental strand, 27421020 - 27420805
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| ||||||| |||| | ||||| ||||||||| || |||||  || | || |||||||||||||||||||| | |||||||   ||||||    
T  27421020 ttcccgaaacatagcaattttaggatattttgttgtaattcacgatgaaatcatgtatatcggcaaagcaagacatctgaagatttgtgaaattcttggg 27420921  T
Q  243 aagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaa 342  Q
    ||||| | ||||||||||||||| || ||| ||||||| || || || ||||| |||||| ||||||| |||||||| |||||| ||| |||||||| ||    
T  27420920 aagatgaagaatgaagattcaagtggcctcagaagacattacaagggaaggaagtatgtttccaagttccaagacatcttacatagaagcaaacacccaa 27420821  T
Q  343 aaagatgaagaaacat 358  Q
    ||||  ||||||||||    
T  27420820 aaaggcgaagaaacat 27420805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 155 - 330
Target Start/End: Original strand, 26651796 - 26651971
Alignment:
Q  155 agcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaat 254  Q
    ||||||| || ||||||||| ||||||||||||||||||| |||| || ||||||||||||||| |||| | |||||||| |||||||||||| | ||||    
T  26651796 agcaattttaaggtgttttgttgtaattcatgaagaaattatgcatatcggcaaagcaagacatttgaagatttgtgaagtccttgggaagataaagaat 26651895  T
Q  255 gaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaa 330  Q
    ||| |||| ||||| ||| |||||   || | |||||||||||||||   |||||| |||||||| ||||||||||    
T  26651896 gaatattctagaggcctcagaagatgttacagagggaggaattatgtcatcaagttccaagacatcttacatggaa 26651971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 141 - 355
Target Start/End: Complemental strand, 34369277 - 34369063
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| ||||||| || ||||||||||| ||||||| || |||||  ||||||| |||||| ||| |||| |||| | ||| | |||| |||    
T  34369277 ttttcccgaaacatagcaattttatggtgttttgatataattcaagatgaaatcatgcaaatcggcaaaacaaaacatttgaagacttgagcagactttg 34369178  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    | |||||||||||||||||||||||||| |||  |||| | || ||| ||||||||| |||||||||||   ||||||| |||  ||||| ||||||||     
T  34369177 gaaagatcatgaatgaagattcaagaggcctcataagagattaaaaatggaggaattttgttcccaagtccgaagacatcttatgtggaagcaaacaccc 34369078  T
Q  341 aaaaagatgaagaaa 355  Q
    |||| || |||||||    
T  34369077 aaaaggacgaagaaa 34369063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 32438827 - 32439043
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| ||||||||||||||||||  |||||||||| ||||||||  || |||| | |||| ||| | || |||| |  ||||||||| |||    
T  32438827 ttttcccgaaacatagcaattctagggtgtttaaatgtaattcacgaagaaatcatgtaaatcgacaaaacaaaatatttgaagacatgtgaagactttg 32438926  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
     ||||| ||||||||||||||||||||| |||  || ||| || ||||||||||||| ||||| |||||   ||||||| ||| |   || ||||||||     
T  32438927 agaagaccatgaatgaagattcaagaggcctcaaaaaacattacaaagggaggaattctgttcacaagtcctaagacatcttatactaaagcaaacacca 32439026  T
Q  341 aaaaagatgaagaaaca 357  Q
    ||||||| |||||||||    
T  32439027 aaaaagacgaagaaaca 32439043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 347
Target Start/End: Complemental strand, 27871235 - 27871039
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    |||| |||||||| | ||||||||| |||||||||||||||||| | ||||||  ||||||| |||||||||| |||| | ||          ||| |||    
T  27871235 tttttccgaaacataacaattctagagtgttttgatgtaattcaaggagaaatcatgcaaatcggcaaagcaaaacatttaaa----------gactttg 27871146  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    | |||| |||||| |||||||||||||| || |||||||| ||||||| ||||||||||||| ||||||| |||||||  ||| || ||||||||||||     
T  27871145 gaaagaccatgaacgaagattcaagaggccttggaagacattataaagtgaggaattatgtttccaagttccaagacaccttatatcgaaacaaacaccc 27871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 170 - 364
Target Start/End: Complemental strand, 17891652 - 17891457
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaa-gacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||||||||| ||||||||  ||||||| | |||| ||| |||||| ||| | || ||  | |||||||||||| | ||||||||||||||||||    
T  17891652 ttttgatgtaattcacgaagaaatcctgcaaatcgacaaaacaaagacatccgaagatttatgtggtccttgggaagatgaagaatgaagattcaagagg 17891553  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaacatacattt 364  Q
     |||  ||||   || ||| ||||||||||||||| |||||| |||||||  |||||| ||| |||||||||||||||  |||||||||| |||||    
T  17891552 cctcataagaatttacaaaaggaggaattatgttctcaagttccaagacaacttacatagaagcaaacacctaaaaaggcgaagaaacatgcattt 17891457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 272
Target Start/End: Original strand, 8501674 - 8501788
Alignment:
Q  158 aattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaa 257  Q
    |||| ||||||||||||||||||||||  || ||||  ||||||| | ||||| |||||||| | | | ||||||||||||||||||||||| |||||||    
T  8501674 aattttagggtgttttgatgtaattcacaaataaatcatgcaaatcgacaaagaaagacatccggagacttgtgaagaccttgggaagatcaagaatgaa 8501773  T
Q  258 gattcaagaggtctc 272  Q
    |||||||||||||||    
T  8501774 gattcaagaggtctc 8501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 364
Target Start/End: Complemental strand, 22627326 - 22627113
Alignment:
Q  150 aacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatca 249  Q
    |||| ||||||| |||| ||||||| ||||||||| ||||||||  |||| || ||||||||||||||| |||| | |||||||| ||||||| |||| |    
T  22627326 aacatagcaattttaggatgttttgttgtaattcacgaagaaatcatgcatatcggcaaagcaagacatttgaagatttgtgaagtccttggg-agatga 22627228  T
Q  250 tgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatg 349  Q
     |||||||||||||| ||| |||  ||||   || | ||||||||||| | |||||||||| ||||| || |||||| |||  ||||||||||| ||       
T  22627227 agaatgaagattcaataggcctcataagatgttagagagggaggaatttttttcccaagttccaagatatcttacatagaagaaaacacctaaagaggca 22627128  T
Q  350 aagaaacatacattt 364  Q
    ||||||||| |||||    
T  22627127 aagaaacatgcattt 22627113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 268
Target Start/End: Original strand, 29717504 - 29717629
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    ||||||||||| |||||||||| ||| ||||||||||||||| ||||||||  ||||||| |||||||||| ||||||||| | | ||| |||| ||| |    
T  29717504 ttcccgaaacatagcaattctaaggttttttgatgtaattcacgaagaaataatgcaaatcggcaaagcaatacatctgaagattagtggagactttgag 29717603  T
Q  243 aagatcatgaatgaagattcaagagg 268  Q
    ||||| | ||||||||||| ||||||    
T  29717604 aagattaagaatgaagattaaagagg 29717629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 32141540 - 32141646
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttggg 242  Q
    |||| |||||| |||||||||| | |||||||||| |||||| ||||||||  ||||||| |||||| ||||||||||||| | |||||||||||||||     
T  32141540 ttcctgaaacatagcaattctaagatgttttgatgaaattcacgaagaaatcatgcaaatcggcaaaacaagacatctgaagacttgtgaagaccttgga 32141639  T
Q  243 aagatca 249  Q
    |||||||    
T  32141640 aagatca 32141646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 141 - 304
Target Start/End: Original strand, 27907668 - 27907833
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| |||||| |||| || |||||||| ||||||||  ||||||| |||||| ||||| ||||| || |||||| ||||| |    
T  27907668 ttttcccgaaacatagcaattttagggtttttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacatctaaagaattgtcaagactt 27907767  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcc 304  Q
    |||||||| || | |||||||||||||||| ||| | ||||  || | ||||||||||| ||||||    
T  27907768 tgggaagaccaaggatgaagattcaagaggcctcaggagactttacatagggaggaattttgttcc 27907833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 148 - 303
Target Start/End: Original strand, 16042814 - 16042969
Alignment:
Q  148 gaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatc-tgaaaaattgtgaagaccttgggaaga 246  Q
    |||||| ||||||| ||||||||||| |||||||||| ||||||||  |||||||||||||| ||| ||||| |||| | ||||  |||  |||||||||    
T  16042814 gaaacatagcaattttagggtgttttaatgtaattcaagaagaaatcatgcaaattggcaaaacaaaacatcttgaagacttgttgaga-tttgggaaga 16042912  T
Q  247 tcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
      ||||||||||||| |||||||||  ||||||| |  |||||||| ||||||||||    
T  16042913 caatgaatgaagatttaagaggtcttcgaagacattgcaaagggagaaattatgttc 16042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 148 - 318
Target Start/End: Complemental strand, 28930218 - 28930046
Alignment:
Q  148 gaaacacagcaattctag-ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaag 245  Q
    |||||| ||||||| ||| || ||||||| |||||||| ||||||||  ||||||| |||||| ||| | |||||||| |||||| ||||| ||||||||    
T  28930218 gaaacatagcaattttagaggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaaaaacatctgaagaattgtcaagactttgggaag 28930119  T
Q  246 atcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagaca 318  Q
    | || ||||||| |||||||||| ||| ||||||  || |   ||||||||| |||||||||||| |||||||    
T  28930118 accaagaatgaatattcaagaggcctcagaagactttacagttggaggaattttgttcccaagttccaagaca 28930046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 34579933 - 34580046
Alignment:
Q  155 agcaattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||| |||||||||||  |||||||||| ||||||||  ||||||| |||||||||||| |||| ||| | | ||||||||||||||||||| | ||    
T  34579933 agcaattttagggtgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaacatccgaagattagtgaagaccttgggaagattaaga 34580032  T
Q  253 atgaagattcaaga 266  Q
    ||||||||||||||    
T  34580033 atgaagattcaaga 34580046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 34585682 - 34585795
Alignment:
Q  155 agcaattctagggtgttttg-atgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatga 252  Q
    ||||||| |||||||||||  |||||||||| ||||||||  ||||||| |||||||||||| |||| ||| | | ||||||||||||||||||| | ||    
T  34585682 agcaattttagggtgttttttatgtaattcacgaagaaatcatgcaaatcggcaaagcaagaacatccgaagattagtgaagaccttgggaagattaaga 34585781  T
Q  253 atgaagattcaaga 266  Q
    ||||||||||||||    
T  34585782 atgaagattcaaga 34585795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45572520 - 45572717
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45572520 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45572619  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45572620 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45572717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45576187 - 45576384
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45576187 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45576286  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45576287 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45576384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45579854 - 45580051
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45579854 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45579953  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45579954 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45580051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45583521 - 45583718
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45583521 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45583620  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45583621 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45583718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45587188 - 45587385
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45587188 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45587287  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45587288 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45587385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45590855 - 45591052
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45590855 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45590954  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45590955 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45591052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45594522 - 45594719
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45594522 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45594621  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45594622 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45594719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45598189 - 45598386
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45598189 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45598288  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45598289 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45598386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45601856 - 45602053
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45601856 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45601955  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45601956 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45602053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45605523 - 45605720
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45605523 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45605622  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45605623 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45605720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45609190 - 45609387
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45609190 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45609289  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45609290 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45609387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45612857 - 45613054
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45612857 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45612956  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45612957 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45613054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 344
Target Start/End: Original strand, 45616524 - 45616721
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaa-ttcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagat 247  Q
    ||||| ||||||| |||| ||||||| ||||| |||| ||||||||  | || ||||||||| ||||  ||||||| | ||| |||||||||||||| ||    
T  45616524 aaacatagcaattttaggatgttttgttgtaaattcacgaagaaatcatacatattggcaaaacaaggtatctgaacatttgcgaagaccttgggaaaat 45616623  T
Q  248 catgaatgaagattcaagag-gtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaa 344  Q
     | ||| |  |||||||||  | ||| ||||||  || ||||||||||||| |||||||||||| |||||||| |||||| ||| |||| ||||||||    
T  45616624 gaagaaggttgattcaagaaagcctcagaagactttacaaagggaggaattttgttcccaagttccaagacatcttacatagaagcaaatacctaaaa 45616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 18758252 - 18758089
Alignment:
Q  141 ttttcccgaaacacagcaattctag-ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||| || ||||||| |||||||| |||||||   ||||||| || ||| ||||| |||| ||| | |||||||||| |    
T  18758252 ttttcccgaaacatagcaattttagaggggttttgaagtaattcacgaagaaaacatgcaaatcggaaaatcaagaacatccgaagacttgtgaagactt 18758153  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgtt 302  Q
    |||||||| || |||||||||||||||||| ||| | ||||  || || || ||||||||||||    
T  18758152 tgggaagaacaagaatgaagattcaagaggcctcaggagactttacaatggcaggaattatgtt 18758089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 310
Target Start/End: Complemental strand, 21905679 - 21905506
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt---gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagac 236  Q
    |||||||| |||| ||||||| |||||| ||||   || |||||||||||||||||  |||||||  ||||| ||||| || || || |||||| |||||    
T  21905679 ttttcccggaacatagcaattttagggtttttttttgaagtaattcatgaagaaatcatgcaaatcagcaaatcaagaacaactaaagaattgtcaagac 21905580  T
Q  237 cttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
     |||||||||  | |||||||||||||||||| ||| | ||||  || | ||| ||||||| |||| |||||||    
T  21905579 attgggaagacaaagaatgaagattcaagaggcctcaggagactttacataggaaggaattctgtttccaagtt 21905506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 22569005 - 22568880
Alignment:
Q  141 ttttcccgaaacacagcaattctag--ggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacc 237  Q
    ||||||||||||| ||||||| |||  ||| |||||| |||||||||||||||||  |||||||  ||||  |||| ||||| ||| | ||||||||||     
T  22569005 ttttcccgaaacatagcaattttagagggttttttgaagtaattcatgaagaaatcgtgcaaatctgcaactcaagaacatccgaagatttgtgaagact 22568906  T
Q  238 ttgggaagatcatgaatgaagattca 263  Q
    || |||||| || |||||||||||||    
T  22568905 ttaggaagaccaagaatgaagattca 22568880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 16157103 - 16157148
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttttcatc 59  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  16157103 attattcttagcatgtttttcagtcattttcagtaggtttttcatc 16157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 268
Target Start/End: Complemental strand, 29144585 - 29144456
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    |||| |||||||| | ||||| ||||| ||||| || |||||||| | ||||||  ||||||||| |||| ||||| || ||||| |||||| ||||| |    
T  29144585 ttttaccgaaacataacaattttagggggtttttgaagtaattcacggagaaatcatgcaaattgacaaatcaagaacaactgaagaattgtcaagactt 29144486  T
Q  239 tgggaagatcatgaatgaagattcaagagg 268  Q
    ||||||||  | ||||||||||||||||||    
T  29144485 tgggaagacaaagaatgaagattcaagagg 29144456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 25532187 - 25532091
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| ||||||||| |||| | |||||| ||||||||  ||||||| |||||| |||| ||||| ||| |||||||||||    
T  25532187 ttttcccgaaacatagcaattttagggtgttcttgaagcaattcacgaagaaatcatgcaaatcggcaaatcaagaacatccgaagaattgtgaaga 25532091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 16157318 - 16157437
Alignment:
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    ||||||| | ||||||| || ||||| ||||||| | |||| | || ||||||||||||| ||| |||||||  ||| |||| || ||||||| |||||     
T  16157318 ttgggaataacatgaataaatattcatgaggtcttgaaagaaattacaaagggaggaattttgtgcccaagtcccaatacatctttcatggaagcaaacg 16157417  T
Q  338 cctaaaaagatgaagaaaca 357  Q
    || ||||||| |||||||||    
T  16157418 cccaaaaagacgaagaaaca 16157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 25938471 - 25938400
Alignment:
Q  149 aaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct 220  Q
    ||||| ||||||  ||| |||||||||||||||||| ||||||||| |||||||||| ||| ||| ||||||    
T  25938471 aaacatagcaatcttagagtgttttgatgtaattcaagaagaaattatgcaaattggtaaaacaaaacatct 25938400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 27540408 - 27540539
Alignment:
Q  138 taattttcccgaaacacagcaattctagggtgttttgatgt-aattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaaga 235  Q
    |||||||||||||||| || |||| ||| | |||||  | | |||||| ||||||||  ||||||| || ||| ||||| |||||||| |||||| ||||    
T  27540408 taattttcccgaaacatagaaattttagagggtttttgtattaattcacgaagaaatcatgcaaatcggtaaatcaagaacatctgaagaattgtcaaga 27540507  T
Q  236 ccttgggaagatcatgaatgaagattcaagag 267  Q
    | ||||||||| || |||| ||||||||||||    
T  27540508 ctttgggaagaccaagaataaagattcaagag 27540539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 8445649 - 8445699
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct 220  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| ||||||    
T  8445649 ttttgatgtaattcaagaagaaattatgcaaatcggcaaagcaaaacatct 8445699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 11464557 - 11464639
Alignment:
Q  236 ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagaca 318  Q
    |||||||||||| | |||||||||||||||||| |||  |||||   | ||||||||||||| | |||||||||| |||||||    
T  11464557 ccttgggaagatgaagaatgaagattcaagaggcctcaaaagacttaacaaagggaggaattctattcccaagttccaagaca 11464639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 343
Target Start/End: Original strand, 24346218 - 24346415
Alignment:
Q  146 ccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatct-gaaaaattgtgaagaccttgggaa 244  Q
    |||||||  ||||||| ||| ||||| |||||||||| | ||||||||  ||||||| | ||||| || | |||| ||| | ||||||| | |||| |||    
T  24346218 ccgaaacctagcaattatagtgtgttatgatgtaattaaagaagaaatcatgcaaatcgacaaagaaa-atatcttgaagacttgtgaaaatcttgagaa 24346316  T
Q  245 gatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaa 343  Q
    ||  | ||||||||| ||| |||| ||| ||||||| || ||| |||| |||||| |||||||||  |||||||| ||| | ||||  |||||||||||    
T  24346317 gacaaagaatgaagactcatgaggcctcagaagacattacaaatggagaaattatattcccaagtcccaagacatcttatacggaagaaaacacctaaa 24346415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 340
Target Start/End: Original strand, 25883634 - 25883687
Alignment:
Q  287 agggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    |||||||||||||||||||||||| |||||||| |||||| |||  ||||||||    
T  25883634 agggaggaattatgttcccaagttccaagacatcttacattgaagtaaacacct 25883687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 30682353 - 30682410
Alignment:
Q  145 cccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaat 202  Q
    ||||||||| ||||||||||||||||| ||||||| |||| ||||||||  |||||||    
T  30682353 cccgaaacatagcaattctagggtgttatgatgtagttcaagaagaaatcatgcaaat 30682410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 25537507 - 25537411
Alignment:
Q  141 ttttcccgaaacacagcaattcta-gggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| || ||| ||||||| |||||||| ||||||||  ||||||| |||||| |||| ||||  ||| |||||||||||    
T  25537507 ttttcccgaaacatagcaattttaggggggttttgaagtaattcacgaagaaatcatgcaaatcggcaaatcaagaacattagaagaattgtgaaga 25537411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 27907541 - 27907581
Alignment:
Q  14 attattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  27907541 attattcttagcatgtttttcagtcattttcagtaagtttt 27907581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 30682448 - 30682516
Alignment:
Q  251 gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacat 319  Q
    ||||||||||| |||||||||| ||||| | | |||||| |||| ||||||| ||||||| ||||||||    
T  30682448 gaatgaagattaaagaggtctcagaagaaattttaaaggaaggacttatgtttccaagttccaagacat 30682516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 32086866 - 32086794
Alignment:
Q  252 aatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattac 324  Q
    |||||||||||||||||  |  | ||||  || |||||||||||||||||||||||||| |||||||| ||||    
T  32086866 aatgaagattcaagaggctttaggagactttacaaagggaggaattatgttcccaagttccaagacattttac 32086794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 21905803 - 21905764
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  21905803 ttattcttagcatgtttttcagtcattttctgtatgtttt 21905764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 22378054 - 22378145
Alignment:
Q  219 ctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtt 310  Q
    ||||| |||||| |||||||||||||||  | |||||||||||||||||| ||| | ||||  || | ||| ||||||| |||| |||||||    
T  22378054 ctgaagaattgtcaagaccttgggaagacaaagaatgaagattcaagaggcctcaggagaccttacataggaaggaattttgtttccaagtt 22378145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 28918265 - 28918226
Alignment:
Q  15 ttattcttagcatgttttccagtcattttcagtatgtttt 54  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  28918265 ttattcttagcatgtttttcagtcattttcagtaggtttt 28918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 17199477 - 17199415
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaatt 203  Q
    ||||||| ||||| |||||||  |||| ||||||| |||||||||||||||||  ||||||||    
T  17199477 ttttcccaaaacatagcaatttgagggggttttgaagtaattcatgaagaaatcatgcaaatt 17199415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 18970921 - 18971006
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaatt 228  Q
    |||| |||||| || |||| ||||||  |||||||||||||| ||||||||  |||||   |||||||||||||||| ||| ||||    
T  18970921 ttcctgaaacatagtaattttagggtactttgatgtaattcacgaagaaatcatgcaatccggcaaagcaagacatcagaagaatt 18971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 25886337 - 25886470
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgat-gtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| ||||| |  ||||||||  |||||||  | ||||| || ||| ||||| |||| ||| | |||||||||| |    
T  25886337 ttttcccgaaacatagcaattttagggggtttttaaagtaattcacaaagaaatcatacaaatcggaaaatcaagaacatcagaagatttgtgaagactt 25886436  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctc 272  Q
    | |||||| ||  | |||||||||||||||||||    
T  25886437 ttggaagaccaatattgaagattcaagaggtctc 25886470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Complemental strand, 25938388 - 25938331
Alignment:
Q  252 aatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagt 309  Q
    ||||||||||||| ||   || ||||||| || |||||||||||||||||||||||||    
T  25938388 aatgaagattcaatagacttcagaagacattacaaagggaggaattatgttcccaagt 25938331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 28766716 - 28766647
Alignment:
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaa 307  Q
    |||||||||| |  ||||||||||||||| ||||| ||||||  || || ||||| ||||||||||||||    
T  28766716 ttgggaagatgaacaatgaagattcaagatgtctcagaagactttacaatgggagaaattatgttcccaa 28766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 17350929 - 17350833
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| ||||| | ||||||  ||||||| ||||||||  ||||||| |||||| |||| || |||||| |||| ||||||    
T  17350929 ttttcccgaaacatagcaattttagggggtttttgaattaattcacgaagaaatcatgcaaatcggcaaatcaagaacttctgaagaattttgaaga 17350833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 38241 - 38020
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||||||||||| | ||||| |||||||||||||||||||||| ||||||||   |||||| || ||| ||||||||  ||| | || ||||||| |||    
T  38241 ttttcccgaaacataacaattttagggtgttttgatgtaattcacgaagaaatcacgcaaatcggaaaaacaagacataggaagacttatgaagactttg 38142  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
    ||||||||||||||||||| | |||||| |||  |||| | |||| |||||| |||| || ||||| ||  |||||||| ||| |||| | ||||||||     
T  38141 ggaagatcatgaatgaagaattaagaggcctcaaaagatattatagagggagaaattttggtcccaggtcccaagacatcttatatggtagcaaacaccc 38042  T
Q  341 aaaaagatgaagaaacatacat 362  Q
    |||| || || |||||| ||||    
T  38041 aaaaggacgaggaaacagacat 38020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 38367 - 38320
Alignment:
Q  16 tattcttagcatgttttccagtcattttcagtatgtttttcatctaga 63  Q
    ||||||||||||||||  |||| |||||||||| ||||||||||||||    
T  38367 tattcttagcatgtttgtcagttattttcagtaggtttttcatctaga 38320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 315
Target Start/End: Complemental strand, 95545 - 95399
Alignment:
Q  170 ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagac-atctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagagg 268  Q
    |||||| |||||||| ||||||||  ||||||| |||||| |||||| ||||||| |||||| ||||| || |||||| ||   ||||||||||||||||    
T  95545 ttttgaagtaattcacgaagaaatcatgcaaatcggcaaaccaagaccatctgaagaattgtcaagacttttggaagaccaattatgaagattcaagagg 95446  T
Q  269 tctcggaagacaatataaagggaggaattatgttcccaagtttcaag 315  Q
    |||| | ||||  || | |||||||||||||||||||||||||||||    
T  95445 tctcaggagactttacatagggaggaattatgttcccaagtttcaag 95399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 355
Target Start/End: Complemental strand, 41274 - 41074
Alignment:
Q  157 caattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattg-gcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaat 254  Q
    ||||| ||||||||| ||||||||||||| ||||||||  |||||||   |||||| |||||||||||| | || ||  |||||||||||||| | ||||    
T  41274 caattttagggtgttcttgatgtaattcacgaagaaatcatgcaaatcatgcaaagtaagacatctgaagatttatgtggaccttgggaagatgaagaat 41175  T
Q  255 gaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaa 354  Q
    | |||||||||||| |||  |||||  || ||| ||||||||| |||||  |||||||||||||| |||||| |||  |||||||| || ||| ||||||    
T  41174 ggagattcaagaggcctcataagactttacaaaaggaggaattttgttctaaagtttcaagacatcttacattgaagaaaacacctcaacagacgaagaa 41075  T
Q  355 a 355  Q
    |    
T  41074 a 41074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 339
Target Start/End: Original strand, 10249 - 10437
Alignment:
Q  153 acagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaatt-ggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcat 250  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||   ||||||  ||||||| |||||||||||| | || ||  | ||| |||||||| |     
T  10249 acagcaattttagggtgttcttgatgtaattcacgaagaaatcaagcaaatcaggcaaagaaagacatctgaagatttatgtggtcctcgggaagatgaa 10348  T
Q  251 gaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    |||||||||||||||||| |||  |||||   | ||||||||||||||| |||||||||| ||| |||| |||||| |||  |||||||    
T  10349 gaatgaagattcaagaggcctcaaaagacttcacaaagggaggaattatattcccaagttccaaaacatcttacattgaagaaaacacc 10437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 172 - 343
Target Start/End: Original strand, 88614 - 88785
Alignment:
Q  172 ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtct 271  Q
    |||||||||||||  |||||||  ||||||| ||||| |||||||||||||| | || ||  | |||||| || |  | |||||||||||||| ||  ||    
T  88614 ttgatgtaattcacaaagaaatcatgcaaatcggcaatgcaagacatctgaagatttatgtggtccttggaaataagaagaatgaagattcaaaagccct 88713  T
Q  272 cggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaa 343  Q
    | ||||||  || | |||||| ||||||||||||||||| |||||||| |||||| ||| |||||| |||||    
T  88714 cagaagactttacagagggagaaattatgttcccaagttccaagacatcttacattgaagcaaacaactaaa 88785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 364
Target Start/End: Complemental strand, 7340 - 7109
Alignment:
Q  137 ctaattttcccgaaacacagcaattctagggtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaaga- 235  Q
    ||||||||||||||||| ||||||||||||||||||  || ||||||| ||||||||  ||||||||| | || |||||||| |||| | ||||||| |     
T  7340 ctaattttcccgaaacatagcaattctagggtgtttacatctaattcacgaagaaatcatgcaaattgcctaaacaagacatttgaagacttgtgaatat 7241  T
Q  236 ---ccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaac 332  Q
         || |||| |||||||||||||||| || ||| ||| ||||||| || ||| |   ||||| ||||||| |||   |||||||  ||  ||||| |    
T  7240 tttttttcggaatatcatgaatgaagatttaaaaggcctcagaagacattacaaatgttagaattttgttccctagtccgaagacatcctatgtggaagc 7141  T
Q  333 aaacacctaaaaagatgaagaaacatacattt 364  Q
    ||||||| |||| || ||||||||| ||||||    
T  7140 aaacacccaaaaggacgaagaaacaaacattt 7109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 326
Target Start/End: Original strand, 202010 - 202164
Alignment:
Q  172 ttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtct 271  Q
    ||||||||||||||| ||||||  ||||||| | |||||||||| ||| ||| | || ||  | |||||||||||  | || ||||||||||| ||| ||    
T  202010 ttgatgtaattcatggagaaatcatgcaaatcgacaaagcaagaaatccgaagatttatgtggtccttgggaagacaaagattgaagattcaataggcct 202109  T
Q  272 cggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacat 326  Q
    |  |||||| || | ||||||||||| |||||||||||| |||||||| ||||||    
T  202110 ccaaagacattacagagggaggaattttgttcccaagttccaagacatcttacat 202164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 303
Target Start/End: Original strand, 243978 - 244140
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttg 240  Q
    ||||||||||| ||||||| ||| ||||||| |||||||||||  |||||||  ||||||| | |||||||||| |||| ||| | | ||||||| |||     
T  243978 ttcccgaaacatagcaattttagtgtgtttttgatgtaattcacaaagaaatcatgcaaatcgtcaaagcaagaacatccgaagattagtgaagatctta 244077  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttc 303  Q
    ||||||||| ||||||||||| ||||||  || ||||||  |||| |||||| |||| |||||    
T  244078 ggaagatcaagaatgaagatttaagaggcttcagaagactttatagagggagaaattttgttc 244140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 483 - 351
Alignment:
Q  207 aaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    |||| ||||||| |||| | ||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||  || | |  || |||||| |||||||    
T  483 aaagtaagacatatgaagatttgtgaagaccttgggaggaagatgaatgaagattcaagaggcctcagaagacgttacagaaagatgaattacgttccca 384  T
Q  307 agtttcaagacatattacatggaaacaaacacc 339  Q
    |||| | |||||| |||||| ||| ||||||||    
T  383 agttcccagacatcttacatagaatcaaacacc 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 344
Target Start/End: Complemental strand, 23855 - 23749
Alignment:
Q  238 ttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaaca 337  Q
    |||||||||  |||||||||||||||||||| || |||||| | |||||||||||  ||| ||||||||| | |||||| || ||| |||||| ||||||    
T  23855 ttgggaagacaatgaatgaagattcaagaggccttggaagaaattataaagggagagattttgttcccaactctcaagatatcttatatggaatcaaaca 23756  T
Q  338 cctaaaa 344  Q
    || ||||    
T  23755 cccaaaa 23749  T

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Target: scaffold0441 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 2128 - 2240
Alignment:
Q  158 aattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagcaaga-catctgaaaaattgtgaagaccttgggaagatcatgaatg 255  Q
    |||||||||| ||||| ||||||||||| ||||||||  || |||| ||||| |||||| |||||||| | | ||||||||||| ||||||||| ||||     
T  2128 aattctagggagtttttgatgtaattcacgaagaaatcatgtaaatcggcaatgcaagaacatctgaagattagtgaagaccttcggaagatcaagaatc 2227  T
Q  256 aagattcaagagg 268  Q
    | |||||||||||    
T  2228 atgattcaagagg 2240  T

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Target: scaffold0094 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 264
Target Start/End: Complemental strand, 12155 - 12058
Alignment:
Q  167 gtgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaa 264  Q
    |||||||| ||||||||| ||||||||  |||| || || | || |||||||||||| | ||||||||||  ||||||||| | ||||||||||||||    
T  12155 gtgttttgttgtaattcacgaagaaatcatgcatatcggaagagaaagacatctgaagatttgtgaagacaatgggaagatgaagaatgaagattcaa 12058  T

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Target: scaffold0094; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 6278 - 6201
Alignment:
Q  262 caagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacc 339  Q
    ||||||| ||| ||||||  || |||| || ||||||||||| |||||| |||||||| ||| |||||| ||||||||    
T  6278 caagaggcctcagaagacgttacaaagtgatgaattatgttctcaagttccaagacatcttatatggaagcaaacacc 6201  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 307
Target Start/End: Original strand, 92974 - 93141
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtg-ttttgatgtaattcatgaagaaattttgcaaattggcaaagcaag-acatctgaaaaattgtgaagacct 238  Q
    ||||||||||||| ||||||| ||||| | |||||| |||||||| ||||||||  |||||| |||||||  ||| ||||| ||| |||||||| || ||    
T  92974 ttttcccgaaacatagcaattttagggggtttttgaagtaattcacgaagaaatcatgcaaaatggcaaataaagaacatccgaagaattgtgacga-ct 93072  T
Q  239 tgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaa-gggaggaattatgttcccaa 307  Q
    | |||| | || |||||||||||||||||  ||| ||||||  || ||| |||||||||| |||||||||    
T  93073 taggaaaaccaagaatgaagattcaagagtcctcagaagac-ttacaaatgggaggaattttgttcccaa 93141  T

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Target: scaffold1339 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 1089 - 1033
Alignment:
Q  289 ggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaa 345  Q
    |||| |||||||||||||||||||||||||  |||||| ||||||||| ||||||||    
T  1089 ggagaaattatgttcccaagtttcaagacaacttacatagaaacaaacgcctaaaaa 1033  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 27950 - 27882
Alignment:
Q  287 agggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    ||||||||||| | ||||||||||||||||||| ||| |||||   ||||||||||||||| |||||||    
T  27950 agggaggaattctattcccaagtttcaagacatcttatatggatggaaacacctaaaaagacgaagaaa 27882  T

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Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 343
Target Start/End: Original strand, 13622 - 13823
Alignment:
Q  143 ttcccgaaacacagcaattctagggtgtt-ttgatgtaattcatgaagaaattttgcaaattgg-caaagcaagacatctgaaaaattgtgaagaccttg 240  Q
    ||||| ||||||| ||||| |||||| || ||||||||||| | ||||||||   ||||||  | |||||||||||||  ||| | || ||  | |||||    
T  13622 ttcccaaaacacatcaattttagggtattcttgatgtaatttacgaagaaatcaagcaaatcagacaaagcaagacattcgaagatttatgtggtccttg 13721  T
Q  241 ggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttcccaagtttcaagacatattacatggaaacaaacacct 340  Q
     |||||| | ||| ||| ||||||||||  || ||||||  || ||| ||||||||| |||||||||||||||| |||| |||||| |||  ||||||||    
T  13722 agaagatgaagaaggaaaattcaagaggcatcagaagactttacaaatggaggaatt-tgttcccaagtttcaatacatcttacattgaagaaaacacct 13820  T
Q  341 aaa 343  Q
    |||    
T  13821 aaa 13823  T

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Target: scaffold0360 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 16640 - 16740
Alignment:
Q  168 tgttttgatgtaattcatgaagaaattttgcaaattggcaaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagag 267  Q
    ||||||| || |||||| ||||||||  | || || | |||||||||||||||||| | |||||||||  ||||| | || | |||||||||||||||||    
T  16640 tgttttgttgaaattcacgaagaaatcatacatatcgacaaagcaagacatctgaagatttgtgaagaatttggggaaatgaagaatgaagattcaagag 16739  T
Q  268 g 268  Q
    |    
T  16740 g 16740  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 36352 - 36413
Alignment:
Q  294 aattatgttcccaagtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    |||||||||||||| ||||||| ||  |||||| |||| |||||||||||||| | ||||||    
T  36352 aattatgttcccaaatttcaaggcaacttacattgaaataaacacctaaaaaggtaaagaaa 36413  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 355
Target Start/End: Original strand, 14001 - 14148
Alignment:
Q  207 aaagcaagacatctgaaaaattgtgaagaccttgggaagatcatgaatgaagattcaagaggtctcggaagacaatataaagggaggaattatgttccca 306  Q
    |||||||||||||||||   || | ||||||| ||| |||| | |||| ||||||||||||| |||  || ||  || |||||||  |||| | ||| ||    
T  14001 aaagcaagacatctgaagttttttaaagacctcggg-agatgaagaatcaagattcaagaggcctcaaaatacgttacaaagggattaattctcttctca 14099  T
Q  307 agtttcaagacatattacatggaaacaaacacctaaaaagatgaagaaa 355  Q
    |||| |||||||| ||| ||| || |||||||| ||||||| |||||||    
T  14100 agttccaagacatcttatatgaaagcaaacacccaaaaagacgaagaaa 14148  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 22987 - 22891
Alignment:
Q  141 ttttcccgaaacacagcaattctagggtgtttt-gatgtaattcatgaagaaattttgcaaattggcaaagc-aagacatctgaaaaattgtgaaga 235  Q
    ||||||||||||| ||||||| || || ||||| || ||| |||| ||||||||  |||||||||||||| | || ||||||||| ||||| |||||    
T  22987 ttttcccgaaacatagcaattataaggagtttttgaagtatttcacgaagaaatcatgcaaattggcaaatcaaaaacatctgaagaattgagaaga 22891  T

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