View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7515_low_3 (Length: 452)

Name: NF7515_low_3
Description: NF7515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7515_low_3
NF7515_low_3
[»] chr4 (64 HSPs)
chr4 (175-316)||(20225377-20225518)
chr4 (188-316)||(43771127-43771257)
chr4 (188-316)||(8108957-8109087)
chr4 (188-281)||(41153247-41153340)
chr4 (216-302)||(50879471-50879559)
chr4 (188-321)||(24834574-24834709)
chr4 (181-321)||(34129442-34129584)
chr4 (181-321)||(45081784-45081926)
chr4 (188-316)||(49077250-49077380)
chr4 (188-312)||(50164400-50164526)
chr4 (188-289)||(722187-722288)
chr4 (188-316)||(39471158-39471288)
chr4 (188-304)||(47009202-47009320)
chr4 (181-293)||(37451055-37451165)
chr4 (181-321)||(40991631-40991773)
chr4 (188-307)||(49242180-49242301)
chr4 (188-306)||(754629-754749)
chr4 (217-311)||(22592310-22592406)
chr4 (188-286)||(29699522-29699619)
chr4 (181-312)||(48339382-48339515)
chr4 (195-308)||(46242000-46242113)
chr4 (188-281)||(50481594-50481687)
chr4 (188-316)||(10169694-10169822)
chr4 (188-323)||(26361357-26361486)
chr4 (188-316)||(24938464-24938588)
chr4 (209-288)||(30867002-30867081)
chr4 (188-316)||(46287442-46287572)
chr4 (210-316)||(13069942-13070049)
chr4 (210-316)||(47237812-47237920)
chr4 (188-312)||(20454545-20454669)
chr4 (181-312)||(25719154-25719286)
chr4 (212-321)||(42862494-42862605)
chr4 (188-250)||(1559963-1560025)
chr4 (210-321)||(39016659-39016772)
chr4 (234-311)||(1559812-1559891)
chr4 (188-321)||(13519943-13520080)
chr4 (210-289)||(16178614-16178692)
chr4 (188-316)||(43958152-43958281)
chr4 (192-287)||(52671862-52671957)
chr4 (264-315)||(40812039-40812092)
chr4 (264-323)||(42862412-42862473)
chr4 (198-321)||(50571860-50571985)
chr4 (209-311)||(2088735-2088839)
chr4 (252-289)||(47237768-47237805)
chr4 (182-278)||(5044583-5044679)
chr4 (284-320)||(8109105-8109141)
chr4 (188-321)||(33653538-33653673)
chr4 (188-271)||(4138913-4138996)
chr4 (189-292)||(33995985-33996088)
chr4 (264-316)||(37315688-37315742)
chr4 (264-312)||(51206171-51206221)
chr4 (181-271)||(31250925-31251015)
chr4 (266-321)||(39016793-39016850)
chr4 (213-316)||(44832464-44832569)
chr4 (264-323)||(44832591-44832652)
chr4 (188-250)||(45310997-45311059)
chr4 (210-316)||(2187885-2187992)
chr4 (284-321)||(19447281-19447318)
chr4 (284-321)||(26361302-26361339)
chr4 (188-229)||(54543428-54543469)
chr4 (265-314)||(13070069-13070120)
chr4 (154-186)||(19447293-19447325)
chr4 (284-320)||(20225350-20225386)
chr4 (192-276)||(22542424-22542508)
[»] chr3 (61 HSPs)
chr3 (181-316)||(55452057-55452192)
chr3 (188-316)||(46450068-46450197)
chr3 (188-321)||(46160945-46161078)
chr3 (188-316)||(28529254-28529382)
chr3 (188-316)||(20791297-20791427)
chr3 (188-312)||(41451944-41452070)
chr3 (188-322)||(20493494-20493630)
chr3 (190-316)||(37776754-37776882)
chr3 (188-321)||(24734701-24734836)
chr3 (188-315)||(27243047-27243177)
chr3 (188-321)||(52124005-52124140)
chr3 (188-281)||(18427199-18427292)
chr3 (211-316)||(30624634-30624739)
chr3 (188-271)||(2419513-2419596)
chr3 (188-316)||(14236020-14236150)
chr3 (192-307)||(22604570-22604687)
chr3 (188-289)||(26310495-26310596)
chr3 (208-316)||(5452129-5452239)
chr3 (192-250)||(752461-752519)
chr3 (210-321)||(37600201-37600314)
chr3 (194-316)||(41387564-41387686)
chr3 (210-288)||(43657067-43657145)
chr3 (181-307)||(10948602-10948730)
chr3 (182-271)||(19345043-19345132)
chr3 (182-315)||(50661564-50661700)
chr3 (210-311)||(46237117-46237220)
chr3 (188-278)||(346194-346284)
chr3 (192-250)||(742025-742083)
chr3 (188-280)||(49072044-49072136)
chr3 (181-304)||(138778-138901)
chr3 (188-316)||(29755501-29755631)
chr3 (192-316)||(40715915-40716041)
chr3 (188-310)||(50156709-50156831)
chr3 (210-294)||(357785-357869)
chr3 (214-321)||(13809078-13809186)
chr3 (176-316)||(21348031-21348170)
chr3 (188-300)||(37285302-37285414)
chr3 (209-284)||(7419248-7419323)
chr3 (188-308)||(8825028-8825150)
chr3 (188-275)||(29588782-29588869)
chr3 (210-289)||(54140964-54141043)
chr3 (192-270)||(30355183-30355261)
chr3 (188-323)||(48351430-48351567)
chr3 (261-316)||(54140891-54140948)
chr3 (210-316)||(10769796-10769904)
chr3 (234-316)||(29389108-29389192)
chr3 (221-306)||(40702204-40702289)
chr3 (284-320)||(5452057-5452093)
chr3 (261-304)||(357885-357928)
chr3 (264-316)||(37600128-37600182)
chr3 (264-316)||(38928007-38928061)
chr3 (179-250)||(39186033-39186104)
chr3 (208-308)||(45515564-45515666)
chr3 (284-322)||(24734854-24734892)
chr3 (261-311)||(24748913-24748965)
chr3 (192-298)||(36750955-36751063)
chr3 (284-321)||(41451889-41451926)
chr3 (211-321)||(46575944-46576056)
chr3 (284-317)||(52123954-52123987)
chr3 (190-307)||(41707490-41707609)
chr3 (261-314)||(52951482-52951537)
[»] chr7 (61 HSPs)
chr7 (189-316)||(48374489-48374616)
chr7 (179-316)||(33008105-33008244)
chr7 (175-321)||(31502502-31502648)
chr7 (188-316)||(46517294-46517422)
chr7 (188-316)||(22189940-22190070)
chr7 (325-433)||(19850672-19850781)
chr7 (188-321)||(27888278-27888413)
chr7 (210-323)||(17354598-17354713)
chr7 (192-289)||(7775030-7775126)
chr7 (188-313)||(12263485-12263612)
chr7 (188-316)||(11824072-11824202)
chr7 (192-322)||(27949268-27949400)
chr7 (192-321)||(32205075-32205203)
chr7 (188-317)||(25092710-25092841)
chr7 (188-316)||(32178853-32178980)
chr7 (210-316)||(13919781-13919889)
chr7 (210-316)||(22786152-22786260)
chr7 (188-316)||(25686884-25687019)
chr7 (188-321)||(39254079-39254214)
chr7 (210-321)||(26703511-26703622)
chr7 (188-316)||(32212919-32213048)
chr7 (181-308)||(6442174-6442303)
chr7 (192-278)||(11692220-11692306)
chr7 (181-316)||(19422876-19423013)
chr7 (209-316)||(19494409-19494518)
chr7 (209-316)||(25428549-25428658)
chr7 (182-316)||(17813824-17813952)
chr7 (181-321)||(1687980-1688121)
chr7 (209-316)||(12270989-12271095)
chr7 (192-316)||(14795132-14795258)
chr7 (192-316)||(15242124-15242250)
chr7 (221-312)||(8073370-8073463)
chr7 (209-320)||(44511006-44511119)
chr7 (188-321)||(24539171-24539307)
chr7 (181-272)||(1316320-1316411)
chr7 (188-321)||(9648918-9649055)
chr7 (256-316)||(14759763-14759825)
chr7 (188-316)||(31731304-31731436)
chr7 (188-320)||(32055573-32055707)
chr7 (192-274)||(10934018-10934100)
chr7 (181-259)||(23564077-23564155)
chr7 (262-321)||(25428472-25428533)
chr7 (210-316)||(45909456-45909565)
chr7 (264-322)||(13919908-13919968)
chr7 (188-244)||(36845571-36845627)
chr7 (264-321)||(37549620-37549679)
chr7 (189-229)||(44350852-44350892)
chr7 (265-320)||(11824199-11824254)
chr7 (210-285)||(14759677-14759752)
chr7 (264-316)||(19840883-19840937)
chr7 (264-316)||(26703438-26703492)
chr7 (193-321)||(32605328-32605457)
chr7 (210-284)||(19840956-19841030)
chr7 (261-303)||(31874047-31874089)
chr7 (188-321)||(17749690-17749826)
chr7 (264-322)||(27888409-27888469)
chr7 (264-314)||(45909584-45909636)
chr7 (284-321)||(48374433-48374470)
chr7 (284-316)||(27949422-27949454)
chr7 (188-244)||(31759838-31759894)
chr7 (284-316)||(42863581-42863613)
[»] chr8 (46 HSPs)
chr8 (188-316)||(23685132-23685262)
chr8 (188-321)||(43506534-43506666)
chr8 (181-321)||(1977215-1977357)
chr8 (188-316)||(9952806-9952936)
chr8 (188-316)||(32072098-32072228)
chr8 (182-316)||(28413912-28414048)
chr8 (211-307)||(31711634-31711730)
chr8 (188-310)||(24055974-24056098)
chr8 (188-321)||(8914767-8914902)
chr8 (188-321)||(16983390-16983525)
chr8 (214-321)||(34861262-34861369)
chr8 (214-322)||(6387558-6387666)
chr8 (188-321)||(31301111-31301245)
chr8 (188-316)||(8903853-8903983)
chr8 (188-316)||(3099691-3099821)
chr8 (210-315)||(1205829-1205936)
chr8 (211-307)||(35689490-35689588)
chr8 (188-316)||(45246433-45246565)
chr8 (189-308)||(41727439-41727560)
chr8 (194-316)||(5979881-5980005)
chr8 (188-289)||(17499282-17499383)
chr8 (188-243)||(7493391-7493447)
chr8 (188-288)||(35797426-35797526)
chr8 (210-314)||(43026296-43026400)
chr8 (192-312)||(35151782-35151904)
chr8 (210-321)||(7599493-7599606)
chr8 (236-322)||(45218614-45218700)
chr8 (193-314)||(17716856-17716977)
chr8 (188-316)||(4674912-4675037)
chr8 (188-271)||(17741576-17741659)
chr8 (188-323)||(36629653-36629788)
chr8 (189-308)||(14236347-14236468)
chr8 (284-322)||(16983543-16983581)
chr8 (265-316)||(31691637-31691690)
chr8 (210-312)||(1423751-1423855)
chr8 (284-321)||(1961407-1961444)
chr8 (194-247)||(9192073-9192126)
chr8 (188-280)||(9193421-9193513)
chr8 (182-250)||(35819201-35819269)
chr8 (201-272)||(13214542-13214613)
chr8 (264-323)||(1977165-1977226)
chr8 (188-289)||(13407372-13407474)
chr8 (280-322)||(23142810-23142852)
chr8 (265-314)||(1205956-1206007)
chr8 (284-316)||(13407322-13407354)
chr8 (284-316)||(34952462-34952494)
[»] chr6 (33 HSPs)
chr6 (181-316)||(12753802-12753939)
chr6 (188-323)||(34905330-34905467)
chr6 (181-316)||(32598990-32599124)
chr6 (188-309)||(31116173-31116296)
chr6 (188-316)||(445819-445949)
chr6 (188-316)||(21987293-21987423)
chr6 (181-316)||(10133200-10133337)
chr6 (210-323)||(6531369-6531484)
chr6 (188-307)||(5106308-5106429)
chr6 (210-321)||(19090286-19090399)
chr6 (188-321)||(32122791-32122926)
chr6 (210-314)||(35128794-35128900)
chr6 (188-316)||(1392631-1392758)
chr6 (217-289)||(12327283-12327355)
chr6 (188-272)||(32112766-32112850)
chr6 (188-271)||(16852022-16852105)
chr6 (188-289)||(12690282-12690384)
chr6 (193-281)||(31443997-31444085)
chr6 (264-316)||(19090213-19090267)
chr6 (264-316)||(19737433-19737487)
chr6 (210-321)||(10060855-10060968)
chr6 (188-246)||(16436137-16436195)
chr6 (188-272)||(12780808-12780892)
chr6 (188-278)||(2675936-2676026)
chr6 (269-316)||(4595875-4595922)
chr6 (188-247)||(16187481-16187540)
chr6 (188-247)||(16187699-16187758)
chr6 (211-289)||(4595772-4595850)
chr6 (188-277)||(12784988-12785077)
chr6 (264-321)||(16187428-16187485)
chr6 (192-289)||(17144724-17144821)
chr6 (289-321)||(1392781-1392813)
chr6 (264-321)||(34905463-34905522)
[»] chr2 (53 HSPs)
chr2 (181-316)||(26767803-26767940)
chr2 (188-316)||(12989192-12989322)
chr2 (211-307)||(4877294-4877390)
chr2 (188-321)||(9470077-9470212)
chr2 (188-321)||(10981514-10981649)
chr2 (196-316)||(6980177-6980299)
chr2 (210-316)||(42182890-42182998)
chr2 (188-316)||(11539424-11539557)
chr2 (188-316)||(34142188-34142318)
chr2 (188-321)||(44274231-44274365)
chr2 (188-316)||(45554568-45554690)
chr2 (188-316)||(18511258-18511388)
chr2 (181-300)||(25730481-25730602)
chr2 (209-316)||(28898107-28898216)
chr2 (189-321)||(2476532-2476664)
chr2 (188-308)||(17188076-17188196)
chr2 (181-316)||(24895308-24895444)
chr2 (188-308)||(30718376-30718497)
chr2 (209-316)||(15508915-15509024)
chr2 (236-321)||(31494204-31494289)
chr2 (213-316)||(37228499-37228605)
chr2 (188-312)||(37652294-37652420)
chr2 (214-321)||(1110194-1110303)
chr2 (188-316)||(7919319-7919447)
chr2 (188-316)||(16719479-16719609)
chr2 (261-316)||(19427369-19427424)
chr2 (188-316)||(19639094-19639224)
chr2 (188-316)||(19837687-19837817)
chr2 (188-316)||(32856184-32856318)
chr2 (188-316)||(33678165-33678294)
chr2 (188-250)||(15884498-15884560)
chr2 (181-316)||(36471880-36472017)
chr2 (210-316)||(4964744-4964852)
chr2 (264-321)||(20951602-20951659)
chr2 (210-316)||(31395516-31395624)
chr2 (193-317)||(3804584-3804711)
chr2 (264-321)||(27968914-27968973)
chr2 (264-321)||(28091614-28091673)
chr2 (264-321)||(28101846-28101905)
chr2 (188-272)||(38464210-38464294)
chr2 (236-316)||(1107039-1107121)
chr2 (261-321)||(37719830-37719892)
chr2 (188-316)||(45270605-45270734)
chr2 (261-316)||(28898035-28898092)
chr2 (262-316)||(4964671-4964727)
chr2 (236-322)||(41805873-41805961)
chr2 (264-321)||(26767755-26767814)
chr2 (188-316)||(35316450-35316578)
chr2 (188-315)||(2122797-2122926)
chr2 (188-234)||(25238326-25238372)
chr2 (157-186)||(30706431-30706460)
chr2 (208-313)||(24497196-24497303)
chr2 (285-321)||(43400284-43400320)
[»] scaffold0018 (1 HSPs)
scaffold0018 (188-284)||(27847-27943)
[»] chr1 (67 HSPs)
chr1 (188-316)||(22540369-22540499)
chr1 (188-321)||(2225222-2225355)
chr1 (181-289)||(15928585-15928693)
chr1 (188-316)||(41958086-41958214)
chr1 (188-316)||(15523211-15523341)
chr1 (188-316)||(15531205-15531335)
chr1 (188-316)||(19101650-19101780)
chr1 (194-302)||(24911480-24911588)
chr1 (210-321)||(44739114-44739227)
chr1 (174-316)||(3872669-3872812)
chr1 (192-316)||(1093126-1093250)
chr1 (188-323)||(6133674-6133810)
chr1 (210-316)||(11135740-11135848)
chr1 (210-316)||(11430442-11430550)
chr1 (188-321)||(25543336-25543470)
chr1 (188-321)||(10659817-10659953)
chr1 (188-289)||(32211833-32211934)
chr1 (188-315)||(35336868-35336991)
chr1 (210-316)||(41917996-41918104)
chr1 (210-323)||(14094072-14094187)
chr1 (181-321)||(931370-931512)
chr1 (236-327)||(4578674-4578765)
chr1 (189-312)||(6325863-6325985)
chr1 (188-316)||(26980311-26980441)
chr1 (188-279)||(30678960-30679051)
chr1 (190-308)||(11987635-11987755)
chr1 (210-316)||(32848654-32848762)
chr1 (210-316)||(41095680-41095788)
chr1 (209-311)||(28218118-28218222)
chr1 (209-278)||(29418522-29418591)
chr1 (188-281)||(49730902-49730995)
chr1 (181-306)||(51732290-51732415)
chr1 (188-280)||(33193089-33193181)
chr1 (188-299)||(50424914-50425026)
chr1 (193-316)||(46335095-46335223)
chr1 (261-316)||(39039477-39039534)
chr1 (171-308)||(37525540-37525677)
chr1 (188-289)||(37552998-37553099)
chr1 (188-322)||(44271913-44272049)
chr1 (264-321)||(11430568-11430627)
chr1 (181-233)||(12767370-12767422)
chr1 (264-320)||(15928682-15928738)
chr1 (192-316)||(8741276-8741404)
chr1 (227-323)||(9165296-9165394)
chr1 (188-316)||(33059942-33060071)
chr1 (264-315)||(11135867-11135920)
chr1 (211-281)||(15660931-15661001)
chr1 (261-316)||(21466693-21466750)
chr1 (188-322)||(8899009-8899145)
chr1 (192-281)||(50539162-50539251)
chr1 (264-322)||(50773103-50773163)
chr1 (284-323)||(13889293-13889332)
chr1 (236-316)||(18157039-18157121)
chr1 (196-308)||(27570234-27570348)
chr1 (209-288)||(28109899-28109977)
chr1 (197-321)||(31074712-31074838)
chr1 (278-316)||(11851925-11851963)
chr1 (261-316)||(13388335-13388392)
chr1 (287-321)||(28218040-28218074)
chr1 (211-321)||(13114742-13114854)
chr1 (264-314)||(32848583-32848635)
chr1 (264-322)||(41095601-41095661)
chr1 (216-289)||(50773188-50773261)
chr1 (284-320)||(8899163-8899199)
chr1 (158-186)||(13114660-13114688)
chr1 (193-281)||(15468258-15468346)
chr1 (188-280)||(41948195-41948287)
[»] chr5 (46 HSPs)
chr5 (188-316)||(10142025-10142153)
chr5 (188-316)||(30325923-30326053)
chr5 (188-280)||(5413786-5413878)
chr5 (188-321)||(28490771-28490906)
chr5 (188-312)||(27592501-27592627)
chr5 (188-316)||(34368361-34368491)
chr5 (218-308)||(10253161-10253251)
chr5 (188-323)||(39246602-39246739)
chr5 (188-319)||(41330442-41330575)
chr5 (210-316)||(42224662-42224770)
chr5 (181-316)||(28090271-28090406)
chr5 (188-281)||(43405431-43405524)
chr5 (181-322)||(28611820-28611963)
chr5 (188-281)||(25710521-25710614)
chr5 (210-316)||(40971524-40971632)
chr5 (188-284)||(36337939-36338035)
chr5 (232-312)||(17700176-17700256)
chr5 (181-281)||(34384733-34384833)
chr5 (210-316)||(13456236-13456342)
chr5 (188-250)||(25919280-25919342)
chr5 (181-238)||(17434891-17434948)
chr5 (264-321)||(24915183-24915240)
chr5 (264-321)||(24991014-24991071)
chr5 (180-321)||(4714745-4714888)
chr5 (188-276)||(41105619-41105707)
chr5 (188-316)||(1923601-1923731)
chr5 (188-304)||(17537151-17537269)
chr5 (256-316)||(17568700-17568762)
chr5 (264-316)||(26072231-26072285)
chr5 (188-307)||(37455359-37455479)
chr5 (192-281)||(10950124-10950213)
chr5 (266-311)||(13456170-13456215)
chr5 (211-316)||(8912511-8912618)
chr5 (264-321)||(42224584-42224643)
chr5 (210-285)||(17568773-17568848)
chr5 (198-281)||(25564006-25564088)
chr5 (264-316)||(32050435-32050489)
chr5 (263-293)||(7137950-7137980)
chr5 (188-289)||(28434867-28434966)
chr5 (237-316)||(32309481-32309562)
chr5 (264-314)||(4959406-4959458)
chr5 (283-320)||(10300051-10300088)
chr5 (264-314)||(40971453-40971505)
chr5 (192-224)||(4427337-4427369)
chr5 (283-319)||(5413730-5413766)
chr5 (289-321)||(37455506-37455538)
[»] scaffold0543 (1 HSPs)
scaffold0543 (192-289)||(9694-9791)
[»] scaffold0492 (1 HSPs)
scaffold0492 (192-289)||(11240-11337)
[»] scaffold0204 (1 HSPs)
scaffold0204 (181-281)||(26904-27004)
[»] scaffold0016 (1 HSPs)
scaffold0016 (264-319)||(204704-204761)


Alignment Details
Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 175 - 316
Target Start/End: Original strand, 20225377 - 20225518
Alignment:
Q  175 aacactctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaaga 274  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  20225377 aacactctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaaga 20225476  T
Q  275 gtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20225477 gtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 20225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 43771257 - 43771127
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |||||| ||||||||||||| |||  ||| ||||||||||||||||||||  |  ||    
T  43771257 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaataaaagagtgagtcatagag 43771158  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||||||||||| ||||    
T  43771157 agagtgttcaaaagtgagtgttgctaccatt 43771127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 8109087 - 8108957
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    ||||||||||||||||||| |||||||||||| |||| ||||  ||||||| | ||||||||| |||  ||| || ||||||||||||||||||||||      
T  8109087 attggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagagtgagtgctagag 8108988  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||||||||||||    
T  8108987 agagtgttgaaaagtgagtgttgctagcatt 8108957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 41153247 - 41153340
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||||| ||||||||||||| | |||||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  41153247 attggtctaaatcattgtgaatgtacactttagaaatagaacctacacaaagtggtgggacatgcatgaatttcatccaataaaagagtaagtg 41153340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 50879559 - 50879471
Alignment:
Q  216 tttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtga 302  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  50879559 tttggaaatagaacccacataaaatggtgggacatgcatgaattccattcaataaaagagtgagtgctagaaagagtgttcaaaagtga 50879471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 24834709 - 24834574
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||| |||||| |||||||||||| |||| |||| |||||||| ||||||||||| |||  ||||||||||||||||  ||||| | |  ||    
T  24834709 attggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatggtgggacatacattgattccatccaataaaaatgtgagcgttagag 24834610  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||  |||||||||||||||||||||| ||||    
T  24834609 agagtgtcaaaaagtgagtgttgctagcatttctct 24834574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 34129442 - 34129584
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| |||| ||||||||||||||||| || |||  ||  ||||||||| ||||||||||    
T  34129442 ctcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagagtgagt 34129541  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||  ||||||| || |||||||| |||||||| |||| ||||    
T  34129542 gctagagagagttttgaaaagtgaatgttgctaccattcctct 34129584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 45081784 - 45081926
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||| || |||||||| |||| | ||||||||| |||||||| ||||||||| | |||    
T  45081784 ctcttttattggtttaaattattgtgagtgtacactttggaaataggacccacacaaaatggtagaacatgcatgtattccatcaaataaaagaataagt 45081883  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||  | ||| |||||||||| || |||||||| |||| ||||    
T  45081884 gctaaaaagaatgttcaaaagagaatgttgctaacattcctct 45081926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 49077380 - 49077250
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||  |||| |||| ||||||||||||||||||||  || ||||  ||| ||||||||| ||||||||  ||    
T  49077380 attggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatgagtgctaaag 49077281  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||| |||| |||| |||||||||||||||||    
T  49077280 agaatgttgaaaactgagtgttgctagcatt 49077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 50164526 - 50164400
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||||||||||||||||||||||||| |||| |||| | |||||| |||||||| || |||  |||  |||||||||| |||||||||||||      
T  50164526 attggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagtgagtgctagag 50164427  T
Q  286 agagtgttcaaaagtgagtgttgctag 312  Q
    |||||||| ||||||||||||| ||||    
T  50164426 agagtgttaaaaagtgagtgttactag 50164400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 188 - 289
Target Start/End: Complemental strand, 722288 - 722187
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||||||||  |||| ||||| ||||||||||||||||||| | |  ||| |||||||||||| ||||||||||||||    
T  722288 attggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaagtgagtgctagag 722189  T
Q  288 ag 289  Q
    ||    
T  722188 ag 722187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 39471288 - 39471158
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| | || ||||  ||||||||||||||||||| |||  ||| |||| |||||||||||  ||| |  ||    
T  39471288 attggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgggacatacattgatttcatctaataaaagagttggtgttaaag 39471189  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||| || ||||||||||||||||||||||    
T  39471188 agagtatttaaaagtgagtgttgctagcatt 39471158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 47009320 - 47009202
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||||||||||||  ||||||||||| |||| |||||||||||||| |||| ||||  ||| ||||  ||||||||||||||||||||||||      
T  47009320 attggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagagtgagtgctagaa 47009221  T
Q  286 agagtgttcaaaagtgagt 304  Q
    |||||||| |||| |||||    
T  47009220 agagtgttgaaaaatgagt 47009202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 181 - 293
Target Start/End: Original strand, 37451055 - 37451165
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||  || ||||  ||  | |||| |||| |||||||||||||||||||    
T  37451055 ctcttttattggtttaaatcattgcgagtctacactttgaaaatagaactcaca--aattggtaagatgtacatggattctatccaataaaagagtgagt 37451152  T
Q  281 gctagagagtgtt 293  Q
    | |||||||||||    
T  37451153 gttagagagtgtt 37451165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 40991631 - 40991773
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||| ||||||||||  |||||||  |  | |||| | ||||||||||  ||  ||| |||||||| |||||||||||    
T  40991631 ctcttttattggtttaaatcattgtgggtctacacttcagaaatagtgccaatacaatggggtgggacatatattgatttcatccaatgaaagagtgagt 40991730  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    | |  |||||||||| |||||||||||||||||||||| ||||    
T  40991731 gatagagagagtgttgaaaagtgagtgttgctagcattcctct 40991773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 49242301 - 49242180
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||||||||||||| ||||||| ||| |||| |||| ||||||||||| ||||||||  ||  ||| |||||||| ||| ||||| || |||      
T  49242301 attggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaagtgactgttagat 49242202  T
Q  286 agagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||||||||||    
T  49242201 agagtgttcaaaagtgagtgtt 49242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 754629 - 754749
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||||||||  |||| ||||| ||||||||||||||||||| | |  | | |||||||||||| |||||||| |||||    
T  754629 attggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgggacatactttgagttcatccaataaaaaagtgagtgttagag 754728  T
Q  288 --agtgttcaaaagtgagtgt 306  Q
      |||||| |||||| |||||    
T  754729 aaagtgttgaaaagtaagtgt 754749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 311
Target Start/End: Complemental strand, 22592406 - 22592310
Alignment:
Q  217 ttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgcta 311  Q
    |||||||||||||  ||||||||||||||||||  |||  ||| |||||||||||||||||||||| ||||||  |||||||||||||| |||||||    
T  22592406 ttggaaatagaacctacacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagagagaatgttcaaaagtgagcgttgcta 22592310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 286
Target Start/End: Complemental strand, 29699619 - 29699522
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga 286  Q
    |||| |||||||||||||  | ||| |||||| |||||||||  |||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||    
T  29699619 attgttttaaatcattgtcgggctatactttg-aaatagaaccaacacaaagtggtgggacatgtattgatttcatccaataaaagagtgagtgctaga 29699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 48339382 - 48339515
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||| |||| || |||||| ||||| |||| |||| ||||||||||||||| |||| |||  |||   |||||||| |||||||||    
T  48339382 ctcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagt 48339481  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctag 312  Q
    | |  |||||||| |||| |||||||||||||||    
T  48339482 gttaaagagagtgctcaatagtgagtgttgctag 48339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 308
Target Start/End: Original strand, 46242000 - 46242113
Alignment:
Q  195 taaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttc 294  Q
    |||||||||||| ||||| | |||| |||| ||||  ||||||| ||||||||||| ||   ||| ||||| ||||||| |||||| ||||||||||||     
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtgagttctagagagtgtta 46242099  T
Q  295 aaaagtgagtgttg 308  Q
    ||||||||||||||    
T  46242100 aaaagtgagtgttg 46242113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 50481594 - 50481687
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||||||||||| |||||| |||||||||||| ||||||||  || ||||||||||| ||||| | |  ||| |||||||||||||||||||||    
T  50481594 attggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtgagtg 50481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 10169694 - 10169822
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||| ||||||  ||||   |||| |||| |||||||||||||||||| ||||||  ||  ||| |||||||||| ||||||| |  |||||    
T  10169694 attggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtaggacatatattgatttcatccaataatagagtgaatattagag 10169793  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| |||||||| ||||| |||||||    
T  10169794 agtgttgaaaagtgaatgttgttagcatt 10169822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 323
Target Start/End: Original strand, 26361357 - 26361486
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||| || |||||||||||| | || |||| |||||||| ||||||| ||| |||  | | |||||||||||||||||        ||    
T  26361357 attggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttcatccaataaaagagtg------ttag 26361450  T
Q  288 agtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||| |||||||||||||||||||||| ||||||    
T  26361451 agtgttgaaaagtgagtgttgctagcattcctctaa 26361486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 24938464 - 24938588
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||  |||||||||||  |||| |||  || ||||| ||||||||||| |||  ||| |||||||||||||||||||||     |    
T  24938464 attggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacattgattacatccaataaaagagtgagtgt----g 24938559  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| |||||| | |||||||||||||    
T  24938560 agtgttaaaaagtaaatgttgctagcatt 24938588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 30867002 - 30867081
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    ||||||||||| |||| |||| |||| ||||||||||||||| ||| ||||  ||||||||||| |||||||||||||||    
T  30867002 tctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaaagtgagtgctagaga 30867081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 46287572 - 46287442
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    ||||||||||||||||||||||| |||||||| |||| |||  |||||||||| ||  |||||  || |||| |||||||||||| ||| ||||||||      
T  46287572 attggtttaaatcattgtgagtcaacactttgaaaattgaatacacacaaagtagtaagacatatattaatttcatccaataaaatagtaagtgctagaa 46287473  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    | | | || ||||||||||||| ||||||||    
T  46287472 aaaatattgaaaagtgagtgttactagcatt 46287442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 13070049 - 13069942
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||| |||||||||| |||| |||  ||| || |||||||||||||||||||||||||||||  ||||||| |||| ||    
T  13070049 ctacactttgaaaatggaacccacataaagtggtggaacatacattgatttca-ccaataaaagagtgagtgctagagagtgtgctcaaaagagagtatt 13069951  T
Q  308 gctagcatt 316  Q
     ||||||||    
T  13069950 cctagcatt 13069942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 47237812 - 47237920
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| ||||  |||| | | |||||||||||||||  ||  ||| |||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  47237812 ctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgtt 47237911  T
Q  308 gctagcatt 316  Q
    | |||||||    
T  47237912 gatagcatt 47237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 312
Target Start/End: Complemental strand, 20454669 - 20454545
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||| ||||||||||||||  ||||||||||| |||| ||||  ||||||||||   |||||| |||  |||  ||| ||||||||||||||||||  ||    
T  20454669 attgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg--tggacatacattgattttatctaataaaagagtgagtgctagag 20454572  T
Q  286 agagtgttcaaaagtgagtgttgctag 312  Q
    |||||||| |||||| |||||||||||    
T  20454571 agagtgttgaaaagtaagtgttgctag 20454545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 312
Target Start/End: Original strand, 25719154 - 25719286
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgag 279  Q
    |||| ||||||| ||||||||||||| ||| |||| |||||||||  ||| |||| ||||||||||||||| |||  ||| || ||||||| ||||||||    
T  25719154 ctctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacattgatttcaaccaataagagagtgag 25719253  T
Q  280 tgctagagagtgttcaaaagtgagtgttgctag 312  Q
    || | ||||| ||  ||||  ||||||||||||    
T  25719254 tgtttgagagagtgtaaaaaagagtgttgctag 25719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 42862494 - 42862605
Alignment:
Q  212 acactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgc 309  Q
    |||||||| |||| |||| |||| ||||||||||||||| |||  ||| || ||||||||| ||||||||||||||  |||| ||||||| |||||||      
T  42862494 acactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagaaagtgctcaaaagagagtgttat 42862593  T
Q  310 tagcattactct 321  Q
    ||||||| ||||    
T  42862594 tagcattcctct 42862605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 1559963 - 1560025
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||| ||| | |||||||||    
T  1559963 attggtttaaatcattttgagtctacacctaggaaatagaactcacaaaaattagtgggacat 1560025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 39016772 - 39016659
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg--ctagagagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||  ||| ||||||||||| |||  ||| |||||||||||| ||| ||||   ||||||||||| ||||| || ||||    
T  39016772 ctacactttggaaatggaacccacgtaaaatggtgggacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgtt 39016673  T
Q  308 gctagcattactct 321  Q
    ||||||||| ||||    
T  39016672 gctagcatttctct 39016659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 311
Target Start/End: Original strand, 1559812 - 1559891
Alignment:
Q  234 acaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgcta 311  Q
    ||||| ||||||||||| | |  ||||||| ||||||| |||||||||||  ||||||||| ||||||||||||||||||    
T  1559812 acaaattggtgggacatacgttgattccattcaataaaggagtgagtgctaaagagagtgtacaaaagtgagtgttgcta 1559891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 13520080 - 13519943
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaa--ttccatccaataaaagagtgagtgct-- 283  Q
    ||||||||||||||||||| || ||||| ||||||| ||||| | ||||||||||||| |||| |||  |  ||  ||||||| ||| ||||||||||      
T  13520080 attggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtgctac 13519981  T
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||| || |||| ||||| | ||||||||| ||||    
T  13519980 agagagtatttaaaaatgagtatcgctagcattcctct 13519943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 16178692 - 16178614
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| ||  |||| ||||||||||||||||||||    
T  16178692 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcactcaat-aaagagtgagtgctagagag 16178614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 43958281 - 43958152
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||| | ||| ||| ||  ||| ||||||| | |||| ||| ||||||||||| |||  |||| || |||||||||||||| ||||||||    
T  43958281 attggtttaaatcactttgattctgcatattgaaaatagatc-cacataaaatggtgggacatacattgattctattcaataaaagagtgaatgctagag 43958183  T
Q  288 ag--tgttcaaaagtgagtgttgctagcatt 316  Q
    ||  |||| |||| |||||||||||| ||||    
T  43958182 agaatgttaaaaactgagtgttgctaacatt 43958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 287
Target Start/End: Complemental strand, 52671957 - 52671862
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||| || | ||||||||  |||| ||||| ||| ||| ||||||||||| |||  ||| |||||||||||| ||||||| ||||||    
T  52671957 gtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatttatttcatccaataaaaaagtgagtactagag 52671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 40812092 - 40812039
Alignment:
Q  264 ccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcat 315  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  40812092 ccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcat 40812039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 42862473 - 42862412
Alignment:
Q  264 ccaataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    ||||||||||||||||||||||| |  ||| ||||||| |||||||||||||||| ||||||    
T  42862473 ccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctctaa 42862412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 50571985 - 50571860
Alignment:
Q  198 atcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttca 295  Q
    ||||||| | |||||||||||| |||| |||  |||| ||| || |||| ||| |||  ||| |||| ||||||||||| ||||||||  |||||||| |    
T  50571985 atcattgcgggtctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagagagagtgttga 50571886  T
Q  296 aaagtgagtgttgctagcattactct 321  Q
    ||||||| |||||||| |||| ||||    
T  50571885 aaagtgactgttgctaacattcctct 50571860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 2088735 - 2088839
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgt 306  Q
    |||||||||||||||| |||  |||| ||||||||||||||| |||  ||| ||  |||| |||||||||||| ||||||| ||  ||||||  ||||||    
T  2088735 tctacactttggaaatggaatccacataaagtggtgggacatacattgatttcactcaattaaagagtgagtgttagagagagtactcaaaaaagagtgt 2088834  T
Q  307 tgcta 311  Q
    |||||    
T  2088835 tgcta 2088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 47237805 - 47237768
Alignment:
Q  252 catgaattccatccaataaaagagtgagtgctagagag 289  Q
    |||||||| |||||||||||||||||||||||||||||    
T  47237805 catgaatttcatccaataaaagagtgagtgctagagag 47237768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 5044583 - 5044679
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtga 278  Q
    ||||| ||||||||||||| ||||| ||||||| |||  |||| ||||||||||||| | ||| |||||  ||  ||| |||||||||||| |||||    
T  5044583 tcttttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatccaataaaaaagtga 5044679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 8109105 - 8109141
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8109105 agagagtgttcaaaagagagtgttgctagcattactc 8109141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 33653538 - 33653673
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||||||  || | | |||| |||| |||  | |||||| ||||||||||| |||  ||| |||| |||||| |||||| |  |  ||    
T  33653538 attggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgatttcatcaaataaatgagtgattaatagag 33653637  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||| |||| ||||||||||||||||| ||||    
T  33653638 agagtgttgaaaactgagtgttgctagcattcctct 33653673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 4138996 - 4138913
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    |||| ||||||| |||| |||||||||||||||||||||||  || | ||  ||||||||||| |||  ||| |||||||||||    
T  4138996 attgatttaaattattgcgagtctacactttggaaatagaatccataaaatatggtgggacatacattgatttcatccaataaa 4138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 292
Target Start/End: Original strand, 33995985 - 33996088
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    |||||||||| |||||||||| || | |||| |||| |||| |||| ||||||||| ||||| |||  |||  ||  ||||||||||||| || ||||||    
T  33995985 ttggtttaaaccattgtgagtttaaattttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagaga 33996084  T
Q  289 gtgt 292  Q
    ||||    
T  33996085 gtgt 33996088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 37315688 - 37315742
Alignment:
Q  264 ccaataaaagagtgagtgcta--gagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||||||  ||||||| ||||||  ||||||||||||||||    
T  37315688 ccaataaaagagtgagtgctaatgagagtgctcaaaaaagagtgttgctagcatt 37315742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 51206171 - 51206221
Alignment:
Q  264 ccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctag 312  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||||||    
T  51206171 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctag 51206221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 31250925 - 31251015
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    |||||| |||| |||||||||||||| ||||||| |||| |||| ||||   || ||| ||||||||||| |||  ||| |||||||||||    
T  31250925 ctcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataaa 31251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 39016793 - 39016850
Alignment:
Q  266 aataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||| ||||||||||  |||||||||||| ||||||||||| |||| ||||    
T  39016793 aataaaagagtaagtgctagagagagtgttcaaaagagagtgttgctaacatttctct 39016850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 44832569 - 44832464
Alignment:
Q  213 cactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgct 310  Q
    |||||||||||| |||  |||| ||| ||||||||||| ||| |||| || ||||||||| |||||||| |||  ||| || ||||||| || ||||| |    
T  44832569 cactttggaaatggaatccacataaaatggtgggacatacattaatttcacccaataaaaaagtgagtgatagaaagaatgctcaaaagagaatgttgtt 44832470  T
Q  311 agcatt 316  Q
    ||||||    
T  44832469 agcatt 44832464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 44832591 - 44832652
Alignment:
Q  264 ccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    ||||||||| | ||||||||  |||||||| ||||||| |||||||||||||||| ||||||    
T  44832591 ccaataaaaaaatgagtgctggagagagtgctcaaaagagagtgttgctagcattcctctaa 44832652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 45310997 - 45311059
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    |||| ||||||||||||| ||||| ||||||| |||| |||  | ||||||||||||||||||    
T  45310997 attgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtggtgggacat 45311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 2187885 - 2187992
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||| ||||||||||||||| |||  ||| || |||||||||||| ||  |||  |||||||| ||||||| |||||||    
T  2187885 ctacactttgaaaat-gaacccacataaagtggtgggacattcattgatttcacccaataaaagagcgaaagctagagagagtgctcaaaagagagtgtt 2187983  T
Q  308 gctagcatt 316  Q
     ||| ||||    
T  2187984 cctaacatt 2187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 19447281 - 19447318
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  19447281 agagagtgttcaaaagagagtgttgctagcactactct 19447318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 26361339 - 26361302
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  26361339 agagggtgttcaaaagagagtgttgctagcattactct 26361302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 54543469 - 54543428
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaac 229  Q
    |||||||||||||||| ||| ||||||| |||||||||||||    
T  54543469 attggtttaaatcattttgaatctacacattggaaatagaac 54543428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 13070069 - 13070120
Alignment:
Q  265 caataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagca 314  Q
    ||||||||||||||||| ||||||   |||||||||| ||||||||||||||    
T  13070069 caataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagca 13070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 19447325 - 19447293
Alignment:
Q  154 tccataaagagtagtgctagcaacactctcttt 186  Q
    ||||| |||||||||||||||||||||||||||    
T  19447325 tccatcaagagtagtgctagcaacactctcttt 19447293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 20225386 - 20225350
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||||||||||||| |||||||||||||| |||||    
T  20225386 agagagtgttcaaaagagagtgttgctagcactactc 20225350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 22542508 - 22542424
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagt 276  Q
    ||||||||||||||| | |||  ||||| |||| |||| ||||||||||||||| |||| | |  ||| ||| ||||||||||||    
T  22542508 gtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtggaacatactttgatttcattcaataaaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 55452057 - 55452192
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  55452057 ctctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaaagagtgagt 55452156  T
Q  281 gctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
     | |||||||||||||||||||||||||||| ||||    
T  55452157 accagagagtgttcaaaagtgagtgttgctaacatt 55452192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 46450197 - 46450068
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaa-gtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga 286  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||| |||  |||||||| |||||||||||||||||||||    
T  46450197 attggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaagagtgagtgctaga 46450098  T
Q  287 gagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||||||||||    
T  46450097 gagtgttcaaaagtgagtgttgctagcatt 46450068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 46161078 - 46160945
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||| ||  |||||||||||||||||||||  |||||||||||| ||||||| ||  ||| |||||||||||||||||||||||||||    
T  46161078 attggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagagtgagtgctagag 46160979  T
Q  288 agtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||||||||||| ||||    
T  46160978 agtgttcaaaagtgagtgttgctagcattcctct 46160945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 28529382 - 28529254
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    ||||||||||||||||||| |||||||||||| |||| |||| ||||||  |||||||||||| |||  ||| |||||||||||||||||||||||||      
T  28529382 attggtttaaatcattgtgggtctacactttgaaaattgaacccacaca--gtggtgggacatacattgatttcatccaataaaagagtgagtgctagag 28529285  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||||||||||||    
T  28529284 agagtgttgaaaagtgagtgttgctagcatt 28529254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 20791427 - 20791297
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  20791427 attggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaag 20791328  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| |||||||||  ||||||||||||    
T  20791327 agagtgtgcaaaagtgaacgttgctagcatt 20791297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 41451944 - 41452070
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||| ||||| |||| |||| |||||||||||||||||||| | |  ||| |||||||||||||||||||| ||||||    
T  41451944 attggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagag 41452043  T
Q  288 a--gtgttcaaaagtgagtgttgctag 312  Q
    |  ||||| ||||||||||||||||||    
T  41452044 attgtgttgaaaagtgagtgttgctag 41452070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 188 - 322
Target Start/End: Original strand, 20493494 - 20493630
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| | || |||| | ||||||||||| |||||| |||  ||| ||||||||||| ||||||||| |  ||    
T  20493494 attggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtaggacatacattgatttcatccaataaatgagtgagtgttagag 20493593  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||| |||||||||||||||||||||| |||||    
T  20493594 agagtgttgaaaagtgagtgttgctagcattcctcta 20493630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 190 - 316
Target Start/End: Original strand, 37776754 - 37776882
Alignment:
Q  190 tggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agag 287  Q
    ||||||||||||||||  |||||||||||| |||| |||| ||||||||||||| |||||| |||  ||| |||| ||||||||||||||||||  |||     
T  37776754 tggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagagtgagtgctggagaa 37776853  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| ||||||||||||||||||||||    
T  37776854 agtgttgaaaagtgagtgttgctagcatt 37776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 24734836 - 24734701
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| | |||| ||||| |||| |||| |||||||||||||||||||| | |  ||| |||||||||||||||||||| ||||||    
T  24734836 attggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagag 24734737  T
Q  288 a--gtgttcaaaagtgagtgttgctagcattactct 321  Q
    |  ||||| |||||||||||||||||| ||| ||||    
T  24734736 attgtgttgaaaagtgagtgttgctagtattcctct 24734701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 27243177 - 27243047
Alignment:
Q  188 attggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--a 284  Q
    ||||| |||||||| |||| ||| |||||||||||||| |||| |||| |||||||||||||||||||  |||  |||||||||||||||||||| |  |    
T  27243177 attgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtggtgggacatgcattgattttatccaataaaagagtgagtgttaga 27243078  T
Q  285 gagagtgttcaaaagtgagtgttgctagcat 315  Q
    ||||||||||||||| |||||||||||||||    
T  27243077 gagagtgttcaaaagagagtgttgctagcat 27243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 52124005 - 52124140
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| |||| | |||||| | ||||||||| ||| |||| ||||||| |||  ||||||||||  ||    
T  52124005 attggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatagtgggacatacattaatttcatccaacaaataagtgagtgctagag 52124104  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||| ||| |||||||||||||||||||||| ||||    
T  52124105 agagcgttaaaaagtgagtgttgctagcattcctct 52124140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 18427199 - 18427292
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||| |||  ||| ||||||||||| |||||||||    
T  18427199 attggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttcatccaataaatgagtgagtg 18427292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 30624739 - 30624634
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgct 310  Q
    |||| |||| |||| |||||||||||||||||||  |||| ||| ||||  || ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30624739 tacattttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagagtgctcaaaagtgagtgttgct 30624640  T
Q  311 agcatt 316  Q
    ||||||    
T  30624639 agcatt 30624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 2419513 - 2419596
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||| ||||||||||  |||||||||||||||    
T  2419513 attggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtggtaggacatgcattgattccatccaataaa 2419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 14236150 - 14236020
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||| ||||| ||||||  ||||||||||||||||||||||| || |||||||||||||||  ||  ||| |||||||||||| ||||||||||  ||    
T  14236150 attggtctaaattattgtggatctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatagtgagtgctaaag 14236051  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||| | ||||||| |||||||    
T  14236050 agagtgtgcaaaaataagtgttggtagcatt 14236020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 22604687 - 22604570
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagag 289  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||||| ||||||||||| ||| ||||  |||||||||| ||||||||| |  ||||||    
T  22604687 gtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagtgagtgttaaagagag 22604588  T
Q  290 tgttcaaaagtgagtgtt 307  Q
    | || |||||| ||||||    
T  22604587 tattaaaaagtaagtgtt 22604570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 26310495 - 26310596
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||| || |||||||||||| |||| ||||  ||| ||| ||||||||||| |||  ||| |||||||||||||||| ||||||||||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagag 26310594  T
Q  288 ag 289  Q
    ||    
T  26310595 ag 26310596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 5452129 - 5452239
Alignment:
Q  208 gtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtg 305  Q
    |||||||||| | |||| |||  ||||||||||||||||| || |||  ||| |||||||||||||||||| || |  |||||||||| |||||||||||    
T  5452129 gtctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtg 5452228  T
Q  306 ttgctagcatt 316  Q
    |||||||||||    
T  5452229 ttgctagcatt 5452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 752519 - 752461
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  752519 gtttaaatcattgtgggtctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 37600201 - 37600314
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||||| ||||| |||| |||| ||||||||||||||| |||  ||| || |||||||||||||| |||||  |||||||| ||||||| |||||||    
T  37600201 ctacactttagaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgtt 37600300  T
Q  308 gctagcattactct 321  Q
    | ||||||| ||||    
T  37600301 gttagcattcctct 37600314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 41387686 - 41387564
Alignment:
Q  194 ttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgtt 293  Q
    ||||||||||||| |||| ||||||| ||||  ||| |||||||| | ||| || || |||  |||  |||||||||| |||||||||||||||||||||    
T  41387686 ttaaatcattgtgggtctgcactttgaaaattaaacccacacaaaatagtgtgatatacatcgatttaatccaataaatgagtgagtgctagagagtgtt 41387587  T
Q  294 caaaagtgagtgttgctagcatt 316  Q
     || | |||||||||||||||||    
T  41387586 gaataatgagtgttgctagcatt 41387564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 43657067 - 43657145
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||  ||| |||| ||||||| |||||||||||||||    
T  43657067 ctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagaga 43657145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 10948602 - 10948730
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||| || ||||||||  |||| ||||  |||||||||||||| |||| ||| |||  | |||||||||  |||||||    
T  10948602 ctcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtccaataaagaagtgagt 10948701  T
Q  281 gct--agagagtgttcaaaagtgagtgtt 307  Q
    |||  ||| |||||| |||||||||||||    
T  10948702 gcttgagaaagtgttgaaaagtgagtgtt 10948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 19345043 - 19345132
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    ||||| ||||||||||||||||||||||||||| |||| |||| |||| |  ||||||||||||||||| |||  ||| |||||||||||    
T  19345043 tcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataaa 19345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 315
Target Start/End: Original strand, 50661564 - 50661700
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    ||||| ||||| |||||||| |||| ||| |||| ||||||||| |||| |||| |||||||||||||||||||  |||  ||| ||||||||||| |||    
T  50661564 tcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatgcattgattttatctaataaaagagtaagt 50661663  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcat 315  Q
    | |  |||||||||| ||||| |||||||||| ||||    
T  50661664 gttagagagagtgtttaaaagagagtgttgcttgcat 50661700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 311
Target Start/End: Original strand, 46237117 - 46237220
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||| ||| ||||| |||| |||| ||||||||||||||| |||  ||| |||||||||||||||||| ||||  |||||||| ||||||| |||||||    
T  46237117 ctacattttagaaatggaacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagagagagtgctcaaaagagagtgtt 46237216  T
Q  308 gcta 311  Q
    ||||    
T  46237217 gcta 46237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 346284 - 346194
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtga 278  Q
    |||| ||||||||||||||||  || |||||| ||||| |||||| ||||||||||| ||||||||| |||| ||| ||| ||||||||||    
T  346284 attgttttaaatcattgtgagcgtaaactttgaaaataaaactcatacaaagtggtgagacatgcatcaatttcattcaacaaaagagtga 346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 250
Target Start/End: Complemental strand, 742083 - 742025
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    ||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||    
T  742083 gtttaaatcattgtgggtctacactttagaaatagaatccacacaaagtggtgggacat 742025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 49072136 - 49072044
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||||||||| |||||| |||||||||||| ||||| |||||| ||||||||||| |||||  || |||| |||||||   ||||||||||    
T  49072136 attggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaatttcatccaacggaagagtgagt 49072044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 138901 - 138778
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||| ||||||||||||| ||| |||| |||  |||| |||  || ||||| ||||| ||||| |||  ||| ||| ||||||||||||||||    
T  138901 ctcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgatttcattcaataaaagagtgagt 138802  T
Q  281 gctagagagtgttcaaaagtgagt 304  Q
    |||||||||| || |||| |||||    
T  138801 gctagagagtcttgaaaactgagt 138778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 29755631 - 29755501
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||   ||||||||||| |||| |||| |||||||||| |||  ||||  ||  |||| || | ||||||||||| ||| |  ||    
T  29755631 attggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgttaaag 29755532  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||| |||| ||||||||||||||||||||||    
T  29755531 agaatgttgaaaagtgagtgttgctagcatt 29755501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 40715915 - 40716041
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagag 289  Q
    ||||||||||||||  ||| ||| |||  |||| |||| ||||||||||| || | ||| ||| |||| || |  |||||||||||||||||  ||||||    
T  40715915 gtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtcatacattaatttcaccatataaaagagtgagtgctagagagag 40716014  T
Q  290 tgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||||||||||||||||| ||||    
T  40716015 tgttgaaaagtgagtgttgctaacatt 40716041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 310
Target Start/End: Original strand, 50156709 - 50156831
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||||||||  |||| |||| | | |||||| |||| |||| ||| |||| ||| |||||||  ||| |||   ||||    
T  50156709 attggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacattaatttcattcaataaataagtaagtatcagag 50156808  T
Q  288 agtgttcaaaagtgagtgttgct 310  Q
     ||||| ||||||||||||||||    
T  50156809 tgtgttgaaaagtgagtgttgct 50156831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 357869 - 357785
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcat-gaattccatccaataaaagagtgagtgctagagagtgttc 294  Q
    ||||||||||||||| |||| |||| ||||||||| | ||| ||| || |||| || |||||||||||||||||||||||||||||    
T  357869 ctacactttggaaatggaacccacataaagtggtgaggcatacattgatttccctc-aataaaagagtgagtgctagagagtgttc 357785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 13809186 - 13809078
Alignment:
Q  214 actttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtg-agtgctagagagtgttcaaaagtgagtgttgctag 312  Q
    ||||||||||| |||| |||| ||| ||||||||||| |||  |||  |||||||||||||||| |||   |||||||||  ||||| ||||||||||||    
T  13809186 actttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtgaagttagagagagtgtgtaaaagagagtgttgctag 13809087  T
Q  313 cattactct 321  Q
    |||| ||||    
T  13809086 catttctct 13809078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 316
Target Start/End: Original strand, 21348031 - 21348170
Alignment:
Q  176 acactctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagag 275  Q
    ||||||||||  ||||||| || ||| ||||||||||   |||  ||||| |||| ||| ||| |||||||||||  |||||||||||| ||||||| ||    
T  21348031 acactctctt--attggttaaagtcaatgtgagtctatgttttaaaaatataactaacataaaatggtgggacatatatgaattccatcaaataaaatag 21348128  T
Q  276 tgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    || |||||||  || ||||||||||||| |||||||| |||||    
T  21348129 tgggtgctagatagcgtgttcaaaagtg-gtgttgctggcatt 21348170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 300
Target Start/End: Complemental strand, 37285414 - 37285302
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||| |||||| |||| ||||||  ||||| ||| || | ||| ||||| ||||| |||||||| |||| || |||| ||||||||||| |     
T  37285414 attggtttaaattattgtgggtctgcactttaaaaataaaacccataaaaaatggtgcgacatacatgaatttcatctaacaaaaaagtgagtgctaaat 37285315  T
Q  288 agtgttcaaaagt 300  Q
    |||||| ||||||    
T  37285314 agtgttaaaaagt 37285302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 7419248 - 7419323
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta 284  Q
    |||||||||||||||||||||||||||||| | | |||||||  ||  |||  ||| |||||||||||||||||||    
T  7419248 tctacactttggaaatagaactcacacaaaatagagggacatatatttattttatctaataaaagagtgagtgcta 7419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 8825028 - 8825150
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||| ||||||||| || |||||| |||| |||| | || ||| |||||||||||  ||  ||| |||| |||||||| |||||| ||||||    
T  8825028 attggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatggtgggacatatattgatttcatctaataaaagggtgagtactagag 8825127  T
Q  288 ag--tgttcaaaagtgagtgttg 308  Q
    ||   ||| ||||||||||||||    
T  8825128 agatggttgaaaagtgagtgttg 8825150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 29588782 - 29588869
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagag 275  Q
    |||| |||||||||||||| |||||||||||| |||| ||||||||| ||||||   |||||| |||  |||  ||||||||||||||    
T  29588782 attgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 289
Target Start/End: Original strand, 54140964 - 54141043
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    |||||||||| |||| |||| |||  ||||||||||||||| |||  ||| || |||||||| |||||||||||||||||    
T  54140964 ctacactttgaaaatggaacccacgtaaagtggtgggacatacattgatttcacccaataaatgagtgagtgctagagag 54141043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 30355183 - 30355261
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataa 270  Q
    |||||||||||||||| | |||| |||| ||||| |||||| | ||| |||||| ||||||||||||| ||| ||||||    
T  30355183 gtttaaatcattgtgaatatacattttgaaaataaaactcatagaaaatggtggaacatgcatgaatttcatacaataa 30355261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 323
Target Start/End: Complemental strand, 48351567 - 48351430
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||| ||||||||||| ||  | ||||||||| |||| |||| |||||||||| ||| |||||  ||  |||  |||||||||||||||| ||  |  ||    
T  48351567 attgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatattgattttatccaataaaagagtgtgtcttaaag 48351468  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||||| |||| ||||||||| ||||||| ||||||    
T  48351467 agagtgttaaaaactgagtgttgttagcattcctctaa 48351430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 54140948 - 54140891
Alignment:
Q  261 catccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||| |||||||||||||||  |||| ||||||| ||||||||||||||||    
T  54140948 catccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcatt 54140891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 10769796 - 10769904
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgtt 307  Q
    ||||||||| ||||| |||| || | ||||||||||||||| |||  ||| || | |||||||||||  ||| ||||||| ||  ||||||| |||||||    
T  10769796 ctacactttagaaatggaacccatataaagtggtgggacatacattgatttcaccaaataaaagagtcggtgatagagagagtgctcaaaagagagtgtt 10769895  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  10769896 gctagcatt 10769904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 29389108 - 29389192
Alignment:
Q  234 acaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||| |||  |||  || |||| |||||||||||| || ||  |||| ||||||||||||||||||||||||    
T  29389108 acaaagtggtgggacatacattgattttattcaatgaaagagtgagtgttaaagtgagtgctcaaaagtgagtgttgctagcatt 29389192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 306
Target Start/End: Original strand, 40702204 - 40702289
Alignment:
Q  221 aaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgt 306  Q
    |||| |||| |||| |||||| |||  ||| ||| |||| ||||  |||||||||| |||||||||||||||| ||||||||||||    
T  40702204 aaattgaacccacataaagtgatggatcatacattaatttcatcatataaaagagtaagtgctagagagtgttgaaaagtgagtgt 40702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 5452093 - 5452057
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||||||||||||| ||||||||||||||||||||    
T  5452093 agagagtgttcaaaagagagtgttgctagcattactc 5452057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 304
Target Start/End: Original strand, 357885 - 357928
Alignment:
Q  261 catccaataaaagagtgagtgctagagagtgttcaaaagtgagt 304  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||    
T  357885 catccaataaaaaagtgagtgatagagagtgttcaaaagagagt 357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 37600182 - 37600128
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||| ||||||||||| ||  ||||||| ||||||||||||||||    
T  37600182 ccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctagcatt 37600128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 38928061 - 38928007
Alignment:
Q  264 ccaataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||| ||||||  ||| ||||||| ||||||||||||||||    
T  38928061 ccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcatt 38928007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 250
Target Start/End: Complemental strand, 39186104 - 39186033
Alignment:
Q  179 ctctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    |||||| | |||| ||||||||||||    ||||||||||||||||||||||| || ||||||||| |||||    
T  39186104 ctctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacat 39186033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 45515564 - 45515666
Alignment:
Q  208 gtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtg 305  Q
    |||||||||||| |||| ||||||||||   ||| ||||| || |||  ||| |||||||||||| |||||||| |  |||||||||| ||||||||| |    
T  45515564 gtctacactttgaaaattgaactcacactctgtgatgggatatacattgatttcatccaataaaatagtgagtgttggagagagtgttaaaaagtgagcg 45515663  T
Q  306 ttg 308  Q
    |||    
T  45515664 ttg 45515666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 24734854 - 24734892
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  24734854 agagagtgttcaaaagagagtgttgctagcattgctcta 24734892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 24748965 - 24748913
Alignment:
Q  261 catccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgcta 311  Q
    ||||||||||||||||||||| |  |||||||| ||||||| |||||||||||    
T  24748965 catccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 36751063 - 36750955
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta--gagag 289  Q
    |||| ||||| |||||||||||||||| |||||  |||  ||| |||||||| |||||||||   ||| ||| || ||| |||||||||| ||  |||||    
T  36751063 gttttaatcaatgtgagtctacactttagaaatgaaacctacataaagtggtaggacatgcactgatttcattcagtaagagagtgagtgttaatgagag 36750964  T
Q  290 tgttcaaaa 298  Q
    |||||||||    
T  36750963 tgttcaaaa 36750955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 41451926 - 41451889
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  41451926 agagagtgttcaaaagagagtgttgctagcattgctct 41451889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 321
Target Start/End: Complemental strand, 46576056 - 46575944
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttg 308  Q
    |||| |||| |||| |||| |||| ||||||||||||||| |||   || || ||||||| |||||||||| |  |||||||||| || || ||||||||    
T  46576056 tacattttgaaaatggaacccacaaaaagtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttg 46575957  T
Q  309 ctagcattactct 321  Q
     ||||||| ||||    
T  46575956 atagcattcctct 46575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 317
Target Start/End: Complemental strand, 52123987 - 52123954
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcatta 317  Q
    |||||||||||||||| |||||||||||||||||    
T  52123987 agagagtgttcaaaagagagtgttgctagcatta 52123954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 41707490 - 41707609
Alignment:
Q  190 tggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agag 287  Q
    |||||||||| |||||| ||||| |||||  |||| |||| ||||||||||| ||  |||| |||  |||  ||||||| | |||||||||| |  ||||    
T  41707490 tggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtgagtgttagagag 41707589  T
Q  288 agtgttcaaaagtgagtgtt 307  Q
    |||| |||||||||| ||||    
T  41707590 agtgctcaaaagtgaatgtt 41707609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 52951482 - 52951537
Alignment:
Q  261 catccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagca 314  Q
    |||||||| | ||||||||||||||||||  |||| ||||| ||||||||||||||    
T  52951482 catccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagca 52951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 316
Target Start/End: Original strand, 48374489 - 48374616
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    ||||||||||| ||||||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  48374489 ttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtggtgggacatgcatgaattccattcaataaaagagtgagtactagaga 48374588  T
Q  289 gtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||||||||    
T  48374589 gtgttcaaaagtgagtgttgctagcatt 48374616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 179 - 316
Target Start/End: Complemental strand, 33008244 - 33008105
Alignment:
Q  179 ctctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtga 278  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||   ||| ||||||||||||||||||    
T  33008244 ctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataaaagagtga 33008145  T
Q  279 gtgctagag--agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  33008144 gtgctagagatagtgttcaaaagtgagtgttgctagcatt 33008105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 31502502 - 31502648
Alignment:
Q  175 aacactctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaaga 274  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||| |||| |||||||| ||||||||||| | |  ||| ||||||||||||||    
T  31502502 aacactctctt--attggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaaga 31502599  T
Q  275 gtgagtgctagagag--tgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||| |||||||  |||| |||||||||||||||||||||| ||||    
T  31502600 gtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctct 31502648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 46517422 - 46517294
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||||||||||||||| |||| |||| | |||| | |||||||| || |||  |||  |||||||||| |||||||||||||||    
T  46517422 attggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgagtgagtgctagag 46517323  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| ||||||||||||||||||||||    
T  46517322 agtgttaaaaagtgagtgttgctagcatt 46517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 22190070 - 22189940
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    ||||||||||||||||| | |||||||||||| |||| |||| |||||||||||||||| ||| |||  ||| |||||||||||||||||||||||||      
T  22190070 attggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagagtgagtgctagag 22189971  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| |||| |||||||| ||||||||    
T  22189970 agagtgttgaaaaatgagtgtttctagcatt 22189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 19850672 - 19850781
Alignment:
Q  325 ataaaatacactgcaaatcaggaataccaatgcatgataagtttacaaaaggttaataaaaagtattgacctctgtc-ggcattggaagaccatacacca 423  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||  | ||| ||||||||||||||||||||||    
T  19850672 ataaaataaactgcaaatcagcaataccaatgcatgataagtgtacaaaaggttaattaaaagtgttgacagcagtcgggcattggaagaccatacacca 19850771  T
Q  424 gtgttcaaga 433  Q
    ||||| ||||    
T  19850772 gtgttgaaga 19850781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 27888413 - 27888278
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||  |||| |||| |||||||||||||||||||| |||  |||  ||||||| | || ||||||| |  ||    
T  27888413 attggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattgattttatccaatgagagggtgagtgttagag 27888314  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||| |||||||||||||||||||||||| ||||    
T  27888313 agagtgctcaaaagtgagtgttgctagcattcctct 27888278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 17354598 - 17354713
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||  ||| |||||||||||||| |||||| |  |||||||| ||||||  |||||||    
T  17354598 ctacactttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgtt 17354697  T
Q  308 gctagcattactctaa 323  Q
    ||||||||| ||||||    
T  17354698 gctagcattcctctaa 17354713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 7775126 - 7775030
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    |||||||||||| || ||| |||||||| |||| ||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||| ||||    
T  7775126 gtttaaatcattctg-gtccacactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgctatagag 7775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 12263485 - 12263612
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| || |  |||||||||| |||||||| |||  ||||||||| |||||||||||  || |  ||    
T  12263485 attggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaaagagtggatgatagag 12263584  T
Q  286 agagtgttcaaaagtgagtgttgctagc 313  Q
    |||||||| |||||| ||||||||||||    
T  12263585 agagtgttgaaaagtaagtgttgctagc 12263612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 11824202 - 11824072
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||| |||||||||||||| || ||||||||| |||| |||   ||||||| ||||||||||| |||  ||| |||||||||||||||||||||||||      
T  11824202 attgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagagtgagtgctagag 11824103  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||| |||| |||||||||||| ||||    
T  11824102 agagcgttgaaaaatgagtgttgctaacatt 11824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 322
Target Start/End: Complemental strand, 27949400 - 27949268
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagag 289  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||| |||| ||||||   |  ||| ||||||||| ||||||||||| |  ||||||    
T  27949400 gtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatggtaggacataacttgatttcatccaatacaagagtgagtgttagagagag 27949301  T
Q  290 tgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||| |||||||||||||| |||| || |||||    
T  27949300 tgttaaaaagtgagtgttgttagctttcctcta 27949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 32205203 - 32205075
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtg 291  Q
    ||||||||||||||    ||| |||||  |||| |||| |||||||| |||| |||||| |||  ||| ||||||||||||||||||||   ||||||||    
T  32205203 gtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatccaataaaagagtgagtag-agagagtg 32205105  T
Q  292 ttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||||||| ||||    
T  32205104 ttcaaaagtgagtgttgctagcattcctct 32205075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 317
Target Start/End: Original strand, 25092710 - 25092841
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgc--tag 285  Q
    |||||||||||| |||||| ||||| |||| | |||| ||||||||||||||| || |||||| |||  ||| |||| ||| |||||||| ||||   ||    
T  25092710 attggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcggaag 25092809  T
Q  286 agagtgttcaaaagtgagtgttgctagcatta 317  Q
    |||||||| |||||||||||||| ||||||||    
T  25092810 agagtgttgaaaagtgagtgttgttagcatta 25092841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 32178853 - 32178980
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| |||||||||||||| || ||||||||| |||| ||| | | ||| |||||||| |||| ||| |||| |||||||||||| ||| ||||||||||    
T  32178853 attgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaatttcatccaataaaatagtaagtgctagag 32178951  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| |||||||| | || ||||||||    
T  32178952 agtgttgaaaagtgaattttactagcatt 32178980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 13919889 - 13919781
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||| ||||||||||||||| |||  ||| || |||||||| ||| |||||||||  |||||| ||||||| |||||||    
T  13919889 ctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatgagcgagtgctagagagagtgctcaaaagagagtgtt 13919790  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  13919789 gctagcatt 13919781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 22786260 - 22786152
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||| ||||| |||  ||| || | ||||||| ||||||||||||  |||||| ||||||| |||||||    
T  22786260 ctacactttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 22786161  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  22786160 gctagcatt 22786152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 25686884 - 25687019
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataa-------aagagtgagt 280  Q
    ||||||||||||||||||| |||||||||||| |||| |||| || | ||||||||  ||||| |||  ||| |||| |||||       |||||||| |    
T  25686884 attggtttaaatcattgtgggtctacactttgaaaattgaacccataaaaagtggtatgacatacattgatttcatcaaataaaatataaaagagtgact 25686983  T
Q  281 gctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||| ||||||||| |||||||    
T  25686984 gctagagagtgttcaaaaatgagtgttgatagcatt 25687019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 39254214 - 39254079
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgc--tag 285  Q
    |||| ||||||| |||||| ||||||| |||  |||| ||||  |||||||||||||  |||| ||| ||||  || ||||||||||||||||||  |||    
T  39254214 attgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgctatag 39254115  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||| |||| |||||||| ||||||||||||| ||||    
T  39254114 agaatgttgaaaagtgaatgttgctagcatttctct 39254079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 26703511 - 26703622
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgtt 307  Q
    ||||||||| ||||| |||| |||| ||||||||| ||||| |||  ||| || ||||||||||||||||||||||||||  || ||||||  |||||||    
T  26703511 ctacactttagaaatggaacccacataaagtggtgagacatacattgatttcacccaataaaagagtgagtgctagagagaatgctcaaaa--gagtgtt 26703608  T
Q  308 gctagcattactct 321  Q
    ||||||||| ||||    
T  26703609 gctagcattcctct 26703622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 32212919 - 32213048
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| | ||||| |||  |||| |||| || ||||||| ||| ||||| |||  ||| ||||||||||||||  |||||||  ||    
T  32212919 attggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaagatagagtgctagag 32213017  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||| ||||||||    
T  32213018 agagtgttaaaaagtgagtgttactagcatt 32213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 6442303 - 6442174
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||| |||||||||||| |||| |||  | |||||| |||||| |||| |||  ||| ||| ||||||| || |||||    
T  6442303 ctcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatggtggaacatacattgatttcatacaataaatgactgagt 6442204  T
Q  281 gct--agagagtgttcaaaagtgagtgttg 308  Q
    | |  |||||||||| |||| |||||||||    
T  6442203 gatagagagagtgttgaaaaatgagtgttg 6442174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 11692306 - 11692220
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtga 278  Q
    |||||||||| ||||||| ||||||||| |||| ||||  |||||||||||| |||||| |||  ||| ||||||||||||||||||    
T  11692306 gtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtggtaggacatacattgatttcatccaataaaagagtga 11692220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 19422876 - 19423013
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||||||||  ||||||||| | ||||||     | |||| | |||||||||| |||  ||| |||||||| |||||||||||    
T  19422876 ctcttttattggtttaaatcattgtggatctacacttcgaaaatagtgacaatacaatggggtgggacatacattgatttcatccaatgaaagagtgagt 19422975  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    | |  |||||||||| ||||||||||||||||| ||||    
T  19422976 gatagagagagtgttgaaaagtgagtgttgctaacatt 19423013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 19494409 - 19494518
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgt 306  Q
    ||||||||||| |||| |||| |||| ||||||||||||||| |||  ||| || ||||||||||||||||| ||||||  |||  ||||||| |||||     
T  19494409 tctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtactagagaaagtactcaaaagagagtgc 19494508  T
Q  307 tgctagcatt 316  Q
    ||||||||||    
T  19494509 tgctagcatt 19494518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 25428549 - 25428658
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgt 306  Q
    ||||||||||||||||  ||| |||| ||||||||||||||| |||  ||| ||  |||||||||||||||| ||  | |||||| ||||||| ||||||    
T  25428549 tctacactttggaaatgtaacccacataaagtggtgggacatacattgatttcacacaataaaagagtgagtactaaaaagagtgctcaaaagagagtgt 25428648  T
Q  307 tgctagcatt 316  Q
    ||||||||||    
T  25428649 tgctagcatt 25428658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 17813824 - 17813952
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||| ||||||||||||||||||      | ||||| ||||||||||||||||||||||||||| ||| |||  ||| | |  ||||||||||||||||    
T  17813824 tcttttattggtttaaatcattgt------atactttagaaatagaactcacacaaagtggtggg-catacattgatttcttttaataaaagagtgagtg 17813916  T
Q  282 ctagaga-gtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||||  || ||||||| |||||    
T  17813917 ctagagacgtgttcaaaaaagaatgttgcttgcatt 17813952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 321
Target Start/End: Complemental strand, 1688121 - 1687980
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||| ||||||| ||||  |||||||||||||||||| ||||||  |||||||||| ||||| ||| |||| |||||||  ||| ||||| |    
T  1688121 ctcttttattgggttaaatcgttgtaggtctacactttggaaataaaactcatgcaaagtggtgagacatacatcaatttcatccaaagaaaaagtgaat 1688022  T
Q  281 g--ctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |    |||||||||| |||| | ||||||||||||||| ||||    
T  1688021 gacagagagagtgttaaaaaat-agtgttgctagcatttctct 1687980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 12271095 - 12270989
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgc--tagagagtgttcaaaagtgagtgt 306  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||  ||| ||||  |||||||||||  |||  ||||||||||| ||||||  ||||    
T  12271095 tctacactttgaaaatagaac-cacacaaagtggtgggacatacattgatttcatctgataaaagagtggatgctatagagagtgttgaaaagt--gtgt 12270999  T
Q  307 tgctagcatt 316  Q
    ||||||||||    
T  12270998 tgctagcatt 12270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 14795258 - 14795132
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag-- 289  Q
    |||||||||||| ||  | ||||||||  |||| ||||  ||| ||| ||||||||||| |||  ||| |||||||||||| ||||| || |||||||      
T  14795258 gtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagag 14795159  T
Q  290 tgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||||||||||||||||||||||    
T  14795158 tgttgaaaagtgagtgttgctagcatt 14795132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 15242250 - 15242124
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag-- 289  Q
    |||||||||||| ||  | ||||||||  |||| ||||  ||| ||| ||||||||||| |||  ||| |||||||||||| ||||| || |||||||      
T  15242250 gtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaagtgactgatagagagag 15242151  T
Q  290 tgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||||||||||||||||||||||    
T  15242150 tgttgaaaagtgagtgttgctagcatt 15242124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 8073370 - 8073463
Alignment:
Q  221 aaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctag 312  Q
    |||| ||||| ||||||||||||||||||| |||  ||| ||||| |||||||||||||||||||  ||| |||| |||| |||||||| ||||    
T  8073370 aaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgttactag 8073463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 44511006 - 44511119
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgt 306  Q
    ||||||| ||| |||| |||| || |||||||| || ||||| |||  ||| |||||||||||| ||||||||||  |||||||||| |||||| |||||    
T  44511006 tctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaagtaagtgt 44511105  T
Q  307 tgctagcattactc 320  Q
    || |||| ||||||    
T  44511106 tgttagctttactc 44511119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 24539171 - 24539307
Alignment:
Q  188 attggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--a 284  Q
    ||||| |||||||| |||| ||| |||| ||||||||| |||  || | |||||||||||||||  ||  |||  |||||||||||||||||||| |  |    
T  24539171 attgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtggtgggacatatattgattttatccaataaaagagtgagtgttaga 24539270  T
Q  285 gagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||| |||||| |||||| ||||||||| ||||    
T  24539271 gagagtgtccaaaagagagtgtcgctagcatttctct 24539307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 1316411 - 1316320
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaa 272  Q
    |||||| |||||||||||||||||| | | |||||||| |||||| ||  || ||||||| |||| |||||  |||||| ||||||||||||    
T  1316411 ctcttttattggtttaaatcattgtaaatgtacactttagaaatacaatccatacaaagttgtggaacatgtgtgaatttcatccaataaaa 1316320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 9649055 - 9648918
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaa--ttccatccaataaaagagtgagtgct-- 283  Q
    ||||||||||||||||||| || ||||| ||||||| ||||| | ||||||||||||| |||| |||  |  ||  ||||||| ||| ||||||||||      
T  9649055 attggtttaaatcattgtgggtatacacattggaaacagaacccgcacaaagtggtggaacatacattgattttttatccaattaaatagtgagtgctac 9648956  T
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||| || |||| ||||| | ||||||||| ||||    
T  9648955 agagagtatttaaaaatgagtatcgctagcattcctct 9648918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 316
Target Start/End: Original strand, 14759763 - 14759825
Alignment:
Q  256 aattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||||||||||||||||| |||||||  |||||| ||||||| ||||||||||||||||    
T  14759763 aatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 14759825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 31731304 - 31731436
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattc----catccaataaaagagtgagtgct 283  Q
    |||||||||||| || | | ||||| | ||||||||||||||  |||||||||||||| ||||  ||  |||     ||||||||| || | | |||| |    
T  31731304 attggtttaaattatcgcgggtctatattttggaaatagaacatacacaaagtggtggaacatatatacattgatcacatccaatagaatattcagtgat 31731403  T
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||||||||||||| ||||    
T  31731404 agagagtgttcaaaagtgagtgttgctaacatt 31731436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 320
Target Start/End: Complemental strand, 32055707 - 32055573
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||| |||||||||||| ||||  ||||| |||  || |||||||||||||||  |   ||| ||||||||||| |||| |||| |||||    
T  32055707 attggtttaaatcaatgtgagtctacagtttgacaatagtacttgcataaagtggtgggacataaaatgatttcatccaataaatgagttagtgttagag 32055608  T
Q  288 --agtgttcaaaagtgagtgttgctagcattactc 320  Q
      |||||||||||| || || || ||||| |||||    
T  32055607 atagtgttcaaaagagattgatgttagcactactc 32055573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 274
Target Start/End: Original strand, 10934018 - 10934100
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaaga 274  Q
    ||||||||||||||| || || |||||||||||||||  || ||||||||||| |||||  || ||||  |||||||||||||    
T  10934018 gtttaaatcattgtgggtttatactttggaaatagaaaccatacaaagtggtgagacatatattaattttatccaataaaaga 10934100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 23564077 - 23564155
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaatt 259  Q
    |||||| |||||||||||| |  |||  ||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||    
T  23564077 ctcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaatt 23564155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 25428533 - 25428472
Alignment:
Q  262 atccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||||||||||| |||| ||||    
T  25428533 atccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgctatcatttctct 25428472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 45909565 - 45909456
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaat-aaaagagtgagtgcta--gagagtgttcaaaagtgagtgt 306  Q
    ||||| ||||||||| |||| |||| ||||||||||||||| |||  ||| || ||||| |||||||||| |||||  ||||||| |||||||  |||||    
T  45909565 ctacaatttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaagagtgaatgctagggagagtgctcaaaagatagtgt 45909466  T
Q  307 tgctagcatt 316  Q
    || |||||||    
T  45909465 tgatagcatt 45909456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 13919908 - 13919968
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||| ||||||||||||||||| ||  ||||||| |||||||||||||||| |||||    
T  13919908 ccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctcta 13919968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 36845571 - 36845627
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtg 244  Q
    ||||||||||||||||||| ||||| |||||| |||| |||| |||||||| |||||    
T  36845571 attggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtg 36845627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 37549679 - 37549620
Alignment:
Q  264 ccaataaaagagtgagtgctagaga--gtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||| |||||||||||  ||| ||||||| |||||||||||||||| ||||    
T  37549679 ccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctct 37549620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 44350852 - 44350892
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaac 229  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  44350852 ttggtttaaatcattgtgagtctacactttgaaaattgaac 44350892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 11824199 - 11824254
Alignment:
Q  265 caataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||| | |||||||  ||||||||||||||||| |||||||| |||||||||||    
T  11824199 caataagaaagtgagtattagagagtgttcaaaagagagtgttgttagcattactc 11824254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 285
Target Start/End: Complemental strand, 14759752 - 14759677
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag 285  Q
    ||||||||||||||||||||  ||  |||||||||||||||  ||  ||| ||  |||||||||||||||||||||    
T  14759752 ctacactttggaaatagaacctacctaaagtggtgggacataaattgatttcactcaataaaagagtgagtgctag 14759677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 19840937 - 19840883
Alignment:
Q  264 ccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||  |||||| ||||||  ||||||||||||||||    
T  19840937 ccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcatt 19840883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 26703492 - 26703438
Alignment:
Q  264 ccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||  |||||| ||| ||| ||||||||||||||||    
T  26703492 ccaataaaagagtgagtgctagagagagtgctcagaagagagtgttgctagcatt 26703438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 32605457 - 32605328
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagt 290  Q
    |||||||||||||||| |||||||||  |||| |||  ||||||||||  || ||||| |||  ||| ||||| |||||||| ||||||||  | |||||    
T  32605457 tttaaatcattgtgagcctacactttaaaaattgaatccacacaaagtaatgagacatacattgatttcatcc-ataaaagaatgagtgctaaaaagagt 32605359  T
Q  291 gttcaaaagtgagtgttgctagcattactct 321  Q
    ||| |||||  |||||||||| |||| ||||    
T  32605358 gttgaaaagcaagtgttgctaacatttctct 32605328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 19840956 - 19841030
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta 284  Q
    ||||||||||||||| |||| |||| ||||||||  ||||| |||  ||| || ||||||||||||||| |||||    
T  19840956 ctacactttggaaatggaacccacataaagtggtaagacatacattgatttcaaccaataaaagagtgaatgcta 19841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 31874089 - 31874047
Alignment:
Q  261 catccaataaaagagtgagtgctagagagtgttcaaaagtgag 303  Q
    |||||||||||| |||||||||||||||||||| |||| ||||    
T  31874089 catccaataaaaaagtgagtgctagagagtgttaaaaaatgag 31874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 17749826 - 17749690
Alignment:
Q  188 attggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--a 284  Q
    ||||| |||||||| |||| ||| |||| |||||||||  ||  || | |||||||||||||||  ||  |||  |||||||||||||||||||| |  |    
T  17749826 attgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtggtgggacatatattgattttatccaataaaagagtgagtgttaga 17749727  T
Q  285 gagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||| |||||  |||||| ||||||||| ||||    
T  17749726 gagagtgtccaaaaaagagtgtcgctagcatttctct 17749690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 27888409 - 27888469
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactcta 322  Q
    ||||||| |||||||||| ||||||| ||  ||||||| |||||||||||||||| |||||    
T  27888409 ccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcattcctcta 27888469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 45909584 - 45909636
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagca 314  Q
    |||||||||||||||||| ||||||| ||  ||||||| ||||||||||||||    
T  45909584 ccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 48374470 - 48374433
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  48374470 agagagtgttcaaaagagagtgttgctagcactactct 48374433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 27949422 - 27949454
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||| ||||||||||||||||    
T  27949422 agagagtgttcaaaagagagtgttgctagcatt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 31759894 - 31759838
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtg 244  Q
    ||||| ||||||||||| ||||||| |||||  |||| ||| |||||||||||||||    
T  31759894 attggcttaaatcattgcgagtctatactttataaattgaagtcacacaaagtggtg 31759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 42863581 - 42863613
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||| ||||||||||||||||||||||    
T  42863581 agagagtgtttaaaagtgagtgttgctagcatt 42863613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 23685262 - 23685132
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  23685262 attggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcttaag 23685163  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| |||||||||||||    
T  23685162 agagtgtgcaaaagtgaatgttgctagcatt 23685132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 43506666 - 43506534
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||| ||||||||||||| |||||||| ||| || |||||| ||||||||||||||| |||| |||  |||  ||||||||||| |||||||| |||||    
T  43506666 attggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaaa-agtgagtgttagag 43506568  T
Q  288 agtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||||||||||| ||||    
T  43506567 agtgttcaaaagtgagtgttgctagcattcctct 43506534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 1977215 - 1977357
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||||||||  ||||||||||| |||| |||| ||||||||||||| |||||| |||  ||| ||||||| | ||||||||||    
T  1977215 ctcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagagtgagt 1977314  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||  |||||||||| |||||||||| ||||||||||| ||||    
T  1977315 gctagagagagtgttaaaaagtgagtattgctagcattcctct 1977357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 9952806 - 9952936
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||||||||||  ||| |||||||||||| | ||||||||  ||    
T  9952806 attggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaaaaatgagtgctagag 9952905  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| |||||| | |||| ||||||||    
T  9952906 agagtgttgaaaagtaaatgttactagcatt 9952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 32072228 - 32072098
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||| ||||||| |||||| |||||||||||  |||| |||| |||||||||||||||||||| |||  ||| |||||||||||||||||||||||||      
T  32072228 attgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtgagtgctagag 32072129  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| |||||||| |||||||||||||    
T  32072128 agagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 182 - 316
Target Start/End: Original strand, 28413912 - 28414048
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||| |||||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||||||| |||  ||| |||| ||||||| |||||| |    
T  28413912 tcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaagtgagcg 28414011  T
Q  282 ct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||  |||||||||| |||||||||||||| |||||||    
T  28414012 ctagagagagtgttgaaaagtgagtgttgttagcatt 28414048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 31711730 - 31711634
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgtt 307  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||  || |||||||||||||    
T  31711730 tacactttagaaatagaactcacacaaagtgatgagacatgcatgaattccatcaaataaaagagtgagtgctagaaagaatttaaaagtgagtgtt 31711634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 310
Target Start/End: Original strand, 24055974 - 24056098
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||| |||||| |||||||||||| |||| ||||| ||||||||||||||||||| ||| |||| ||||  ||||||||| |||||||  ||    
T  24055974 attggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacattaatttcatctgataaaagagcgagtgctaaag 24056073  T
Q  286 agagtgttcaaaagtgagtgttgct 310  Q
    |||| ||| ||||||||||||||||    
T  24056074 agagcgttgaaaagtgagtgttgct 24056098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 8914902 - 8914767
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||  |||| |||||||||||||||||||| |||   ||  ||||||| |||||||||||| |  ||    
T  8914902 attggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtgagtgttagag 8914803  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||| | |||||||||||||||||||||||| ||||    
T  8914802 agagcgctcaaaagtgagtgttgctagcattcctct 8914767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 16983525 - 16983390
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||||||||||||||||||||||||| |||| |||| | ||||||||| ||||||||  |   |||  ||||||||||  ||||||||||||      
T  16983525 attggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtgatgggacataaaatgattttatccaataaatcagtgagtgctagat 16983426  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||| |||||||||||||||||||||| ||||    
T  16983425 agagtgttgaaaagtgagtgttgctagcattcctct 16983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 34861262 - 34861369
Alignment:
Q  214 actttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagc 313  Q
    |||||| |||| ||||  ||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||    
T  34861262 actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgctagagagtgttgaaaagtgagaggtgctagc 34861361  T
Q  314 attactct 321  Q
    ||| ||||    
T  34861362 attcctct 34861369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 6387666 - 6387558
Alignment:
Q  214 actttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagc 313  Q
    ||||||||||| |||| |||| ||| ||||||||||| |||  |||  |||||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  6387666 actttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtgagtgttagagagtgtccaaaagagagtgttgctagc 6387567  T
Q  314 attactcta 322  Q
    ||| |||||    
T  6387566 atttctcta 6387558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 31301245 - 31301111
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgc--tag 285  Q
    |||||||||||| ||| ||| ||||||| ||| ||||||||||||||||||||||||| |||| |||  ||| ||||||||||||||||||||||   |     
T  31301245 attggtttaaattattatga-tctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtgagtgccggaa 31301147  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    | ||||||||||||||||||||  ||||||| ||||    
T  31301146 atagtgttcaaaagtgagtgttattagcattcctct 31301111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 8903983 - 8903853
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| ||||  ||||||||||||||||||| |||  ||| |||| ||||||  ||||||| ||  ||    
T  8903983 attggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttcatcaaataaacaagtgagtactagag 8903884  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| |||| |||||||||||| ||||    
T  8903883 agagtgttgaaaaatgagtgttgctaacatt 8903853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 3099691 - 3099821
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt--gctag 285  Q
    |||||||||||| |||||||| ||| |||||||||||| |||||||||||| |||||| |||| |||  |||||||| ||||||||| |||||  |  ||    
T  3099691 attggtttaaattattgtgagactatactttggaaatataactcacacaaaatggtggaacatacattgattccatctaataaaagaatgagtacgggag 3099790  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    | ||||||||||| ||||| |||||| ||||    
T  3099791 atagtgttcaaaaatgagtattgctaacatt 3099821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 210 - 315
Target Start/End: Complemental strand, 1205936 - 1205829
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||||||||||||| || | ||||||||| ||||| ||| ||||  | | ||||||||||||||||||  |||||||| ||||||| |||||||    
T  1205936 ctacactttggaaatagaacccatataaagtggtgagacatacattaattttacctaataaaagagtgagtgctaaagagagtgctcaaaagagagtgtt 1205837  T
Q  308 gctagcat 315  Q
    ||||||||    
T  1205836 gctagcat 1205829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 35689588 - 35689490
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    ||||||||| |||| ||||||||| ||||||||||||||| |||  ||| |||||||||||| ||||||||||||  |||||| ||||||| |||||||    
T  35689588 tacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtgagtgctagagagagtgctcaaaagagagtgtt 35689490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 45246565 - 45246433
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct---- 283  Q
    |||| ||||||||||||    ||||||||||||||||||||||| || ||||||||| ||||| |||  |||  ||||||||||| ||||||||||        
T  45246565 attgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtgagtgctaaag 45246466  T
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||| |||| |||||||||||||| ||||||||    
T  45246465 agagtgtgtgcaaaagtgagtgttactagcatt 45246433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 41727560 - 41727439
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--aga 286  Q
    ||||||||||||||| ||||||||||| ||  ||| |||||  |||||||| |||||||||| |||  |||  ||| || |||||||||| ||||  |||    
T  41727560 ttggtttaaatcattatgagtctacacattaaaaacagaacctacacaaagcggtgggacatacattgattttatctaacaaaagagtgattgctaaaga 41727461  T
Q  287 gagtgttcaaaagtgagtgttg 308  Q
    ||||||||||||||||||||||    
T  41727460 gagtgttcaaaagtgagtgttg 41727439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 194 - 316
Target Start/End: Complemental strand, 5980005 - 5979881
Alignment:
Q  194 ttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtg 291  Q
    ||||| ||||||||||  |||||||| |||| |||| |||||||||||||||||||| |||  ||  ||||||||| |||||||  | ||  ||||||||    
T  5980005 ttaaaccattgtgagttcacactttgaaaattgaacccacacaaagtggtgggacatacattgatctcatccaatagaagagtgtctactagagagagtg 5979906  T
Q  292 ttcaaaagtgagtgttgctagcatt 316  Q
    || |||||| |||||||||||||||    
T  5979905 ttgaaaagtaagtgttgctagcatt 5979881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 17499282 - 17499383
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||  ||||||||||| |||| ||||  ||||||| |||||||||||  ||  ||| ||||||||||||||  |||||||||||    
T  17499282 attggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaagatagagtgctagag 17499381  T
Q  288 ag 289  Q
    ||    
T  17499382 ag 17499383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 7493391 - 7493447
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactc-acacaaagtggt 243  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  7493391 attggtttaaatcattgtgagtctacactttgaaaatagaacccaacacaaagtggt 7493447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 35797526 - 35797426
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| ||||||||||||||  | ||||||||  |||| |||||| ||||||||||||| |||| |||  |||  ||||||||||||||||| ||||||||    
T  35797526 attgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtgaatgctagag 35797427  T
Q  288 a 288  Q
    |    
T  35797426 a 35797426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 43026400 - 43026296
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgc 309  Q
    ||||||||||||||| |||| |||| |||||||  |||||| |||  |||  | | ||||||| |||||||||||||||||||| ||||| || ||||||    
T  43026400 ctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtgagtgctagagagtgtttaaaagagaatgttgc 43026301  T
Q  310 tagca 314  Q
    |||||    
T  43026300 tagca 43026296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 312
Target Start/End: Original strand, 35151782 - 35151904
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagag 289  Q
    |||| ||| |||||| |||||||||||  |||| |||  | |||||| ||||||||||| |||  ||| |||||||||||||||| | ||||  | ||||    
T  35151782 gtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatggtgggacatacattgatttcatccaataaaagagtaaatgctaaaaagag 35151881  T
Q  290 tgttcaaaagtgagtgttgctag 312  Q
    |||| ||||||||||||||||||    
T  35151882 tgttaaaaagtgagtgttgctag 35151904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 7599493 - 7599606
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||  |||| |||| |||||| ||||| || |||  ||| ||||||||||||||||  |||||  |||||||||||||||  |||||||    
T  7599493 ctacactttggaaaaggaacccacataaagtgctgggatatacattgatttcatccaataaaagagtaggtgctagagagagtgttcaaaaaagagtgtt 7599592  T
Q  308 gctagcattactct 321  Q
    |||| |||| ||||    
T  7599593 gctaacattcctct 7599606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 45218614 - 45218700
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||||||||| ||||  ||| ||||||||||||||| ||||| ||||||||||  ||||| ||||||  |||||||| |||||    
T  45218614 aaagtggtgggacacgcattgatttcatccaataaaagagcgagtgttagagagtgtataaaagagagtgtccctagcattcctcta 45218700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 314
Target Start/End: Complemental strand, 17716977 - 17716856
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgt 292  Q
    ||||| |||||||| |||||||||||| ||||  ||| |||| ||| | |||||||||  ||  ||| ||||||||||||  ||||||| || ||||||     
T  17716977 tttaactcattgtgggtctacactttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgttaaagagtga 17716878  T
Q  293 tcaaaagtgagtgttgctagca 314  Q
    | |||||||||||||| |||||    
T  17716877 tgaaaagtgagtgttgttagca 17716856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 4675037 - 4674912
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| | |||||||||| ||||  ||||||||||||||| | ||||||   || ||| |||| |||||||||||||||  || ||    
T  4675037 attggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgataggacat---tg-atttcatctaataaaagagtgagttttaaag 4674942  T
Q  288 agtgt-tcaaaagtgagtgttgctagcatt 316  Q
    || || | |||||||| |||||||| ||||    
T  4674941 agagtattaaaagtgaatgttgctaacatt 4674912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 17741576 - 17741659
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    ||||||||||| |||| |  |||||||||||| |||| |||||| |||||| ||||||||||| |||  ||| |||||||||||    
T  17741576 attggtttaaaccattataggtctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaataaa 17741659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 323
Target Start/End: Complemental strand, 36629788 - 36629653
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||| ||||||| | |||||||| ||||||||||||| |||||  |||| |   |||| |||  ||| |||| ||||||||||| ||||||  ||    
T  36629788 attggtttagatcattgcgggtctacacattggaaatagaacccacac--agtgataatacatacatttatttcatctaataaaagagtaagtgctaaag 36629691  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    | ||||||||||| ||||| ||| ||||||| ||||||    
T  36629690 atagtgttcaaaaatgagtattgttagcattcctctaa 36629653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 308
Target Start/End: Complemental strand, 14236468 - 14236347
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--a 286  Q
    ||||||||||| |||||| | |||||||||  |||| ||||| |||||||||||||||||||   | |||| | |||||||||| | |||||| |||  |    
T  14236468 ttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacatattttaatttcttccaataaaaaaatgagtggtagaaa 14236369  T
Q  287 gagtgttcaaaagtgagtgttg 308  Q
     |||||| ||||| ||||||||    
T  14236368 aagtgttgaaaagagagtgttg 14236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 16983543 - 16983581
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  16983543 agagagtgttcaaaagagagtgttgctagcattactcta 16983581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 31691637 - 31691690
Alignment:
Q  265 caataaaagagtgagtgcta--gagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||||||||||    
T  31691637 caataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcatt 31691690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 312
Target Start/End: Complemental strand, 1423855 - 1423751
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtg--agtgctagagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| ||||||  |||||||||| |||||| |||  |||  ||| ||||||||||||  | | ||| |||||||| |||||||||||||    
T  1423855 ctacactttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtgtaaatactaaagagtgttgaaaagtgagtgtt 1423756  T
Q  308 gctag 312  Q
    |||||    
T  1423755 gctag 1423751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 1961407 - 1961444
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||| |||||||||||||||||||||    
T  1961407 agagagtgttcaaaagagagtgttgctagcattactct 1961444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 9192126 - 9192073
Alignment:
Q  194 ttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtggga 247  Q
    ||||||||||||||||||||| |||  |||| |||| |||||||||||||||||    
T  9192126 ttaaatcattgtgagtctacaatttaaaaattgaacccacacaaagtggtggga 9192073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 9193513 - 9193421
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||||| ||| |||||  |||||||||||| |||| ||||| ||||||||| ||| ||||| ||  |||| |||| ||||||||| |||||    
T  9193513 attggttttaattattgtaggtctacactttgaaaattgaacttacacaaagtagtgagacatacactaatttcatcaaataaaagaatgagt 9193421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 35819269 - 35819201
Alignment:
Q  182 tctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    ||||| ||| ||||||||||||||| ||||| |||||| |||| || | |||||||| |||||||||||    
T  35819269 tcttttattagtttaaatcattgtgggtctatactttgaaaattgagcccacacaaaatggtgggacat 35819201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 13214613 - 13214542
Alignment:
Q  201 attgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaa 272  Q
    |||||| |||||||||||| |||| |||   ||||||| || |||||||| ||| |||||||||||||||||    
T  13214613 attgtgggtctacactttgaaaattgaatctacacaaaatgatgggacatacattaattccatccaataaaa 13214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 1977226 - 1977165
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||||||||||||||  ||||||||||  ||||||| | ||||| |||||||||||||||    
T  1977226 ccaataaaagagtgagtattagagagtgtgttcaaaagagtgtgttactagcattactctaa 1977165  T

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Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 13407372 - 13407474
Alignment:
Q  188 attggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga 286  Q
    ||||| |||||||| |||| ||| ||||||||| ||||||||| |||  ||| ||||||||||| |||  |||  ||||||||||| ||| |||| ||||    
T  13407372 attgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatggtgggacatacattgattttatccaataaaaaagttagtgttaga 13407471  T
Q  287 gag 289  Q
    |||    
T  13407472 gag 13407474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 23142852 - 23142810
Alignment:
Q  280 tgctagagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||||||| ||||||| |||||||||||||||| |||||    
T  23142852 tgctagagagtgctcaaaagagagtgttgctagcattcctcta 23142810  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 1205956 - 1206007
Alignment:
Q  265 caataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagca 314  Q
    |||||||||||||||||||  |||||||||||||||  ||||||||| ||||    
T  1205956 caataaaagagtgagtgctaaagagagtgttcaaaatagagtgttgcaagca 1206007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 13407354 - 13407322
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||| ||||||||||||||||    
T  13407354 agagagtgttcaaaagagagtgttgctagcatt 13407322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 316
Target Start/End: Complemental strand, 34952494 - 34952462
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||| ||||||||||||||||||||||    
T  34952494 agagagtgttaaaaagtgagtgttgctagcatt 34952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 12753802 - 12753939
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||| |||||||||||||||||| |||||  || ||||||||| ||||||||||||||||||||||||| |||  ||||||| ||||||||| |    
T  12753802 ctcttttattagtttaaatcattgtgagtgtacaccctgaaaatagaacccacacaaagtggtgggacatgcatgtattttatccaatgaaagagtgatt 12753901  T
Q  281 gc--tagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||  || |||||||||||||||||||||||||||||||    
T  12753902 gctataaagagtgttcaaaagtgagtgttgctagcatt 12753939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 323
Target Start/End: Complemental strand, 34905467 - 34905330
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| |||| || ||||||||||||||||| |||  ||| ||||||||||||||||||||| |  ||    
T  34905467 attggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagag 34905368  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||||| |||| ||||||||||||||||| ||||||    
T  34905367 agagtgttgaaaaatgagtgttgctagcatttctctaa 34905330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 32598990 - 32599124
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||| || |||||||||||| ||||||| |||| ||||||||||||||||||||| ||    
T  32598990 ctcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtggcgggacatacatgtattccatccaataaaagagtgggt 32599089  T
Q  281 gctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
       | | ||||||||||||| | |||||||||||||    
T  32599090 -agataaagtgttcaaaagtaaatgttgctagcatt 32599124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 309
Target Start/End: Original strand, 31116173 - 31116296
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| || ||||| ||||||||||||| |||||||||| ||||||||| |||  ||| ||||||||| |||||||| || |  ||    
T  31116173 attggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgatttcatccaatagaagagtgaatgttagag 31116272  T
Q  286 agagtgttcaaaagtgagtgttgc 309  Q
    ||||||||||||||||||||||||    
T  31116273 agagtgttcaaaagtgagtgttgc 31116296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 445949 - 445819
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||| |||| |||||| |||| |||| |||||||||||||| ||||| |||  ||| |||||||||||| ||||||||||||||    
T  445949 attggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaagtgagtgctagag 445850  T
Q  288 --agtgttcaaaagtgagtgttgctagcatt 316  Q
      |||||| |||| ||||| |||||||||||    
T  445849 atagtgttgaaaaatgagtattgctagcatt 445819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 21987423 - 21987293
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| || |||||||||||| || |||  ||| |||||||||||| ||||||||||  ||    
T  21987423 attggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatagtgagtgctaaag 21987324  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| ||||| |||||||    
T  21987323 agagtgtgcaaaagtgaatgttgttagcatt 21987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 10133200 - 10133337
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||||||||  ||||||||||| |||| |||| | || ||||||||||||||| ||  |||| ||||||||||| ||||||||    
T  10133200 ctcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaataaatgagtgagt 10133299  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    | |  |||||||||| ||||||||||||| ||| ||||    
T  10133300 gttagagagagtgttgaaaagtgagtgtttctaccatt 10133337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 6531369 - 6531484
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||| |||||| ||||||||| ||||| ||||||||| |||  ||| || ||||||||||||||||||||  |||||||  ||||||| |||||||    
T  6531369 ctacacttcggaaatggaactcacataaagtagtgggacatacattgatttcacccaataaaagagtgagtgctggagagagtcctcaaaagagagtgtt 6531468  T
Q  308 gctagcattactctaa 323  Q
    ||||||||| ||||||    
T  6531469 gctagcattcctctaa 6531484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 5106429 - 5106308
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||| ||||| || ||||||||| |||| || | |||||||||||||||||||| |||  |||  ||||||||||| |||||||| |||||    
T  5106429 attggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgggacatacattgattttatccaataaaaaagtgagtgttagag 5106330  T
Q  288 --agtgttcaaaagtgagtgtt 307  Q
      |||||| |||||||||||||    
T  5106329 aaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 19090286 - 19090399
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || |||||||||||||| |||||  |||||||| ||||||| |||||||    
T  19090286 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgtt 19090385  T
Q  308 gctagcattactct 321  Q
    | ||||||| ||||    
T  19090386 gttagcattcctct 19090399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 32122926 - 32122791
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||| ||||||||||||| |||||||||||| |||| |||||| |||||| |||||||||||  ||  ||| |||||||||||  |||||||| |  |     
T  32122926 attggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaataagtgagtggtggaa 32122827  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||| ||||| |||||||| ||||||| ||||    
T  32122826 agagtgttgaaaagagagtgttgttagcatttctct 32122791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 35128794 - 35128900
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||| ||||||||||||||| |||  |||  | ||||||||||||||| ||||  |||||||||||||||| |||||||    
T  35128794 ctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaaagagtgactgctagagagagtgttcaaaagagagtgtt 35128893  T
Q  308 gctagca 314  Q
    |||||||    
T  35128894 gctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 1392758 - 1392631
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| | ||||| |||  |||| |||| || ||||||| ||| ||||| |||  ||| |||||||||||| |  |||||||||||    
T  1392758 attggtttaaatcattgtggg-ctacattttaaaaattgaacacatacaaagtagtgagacatacattgatttcatccaataaaaaatagagtgctagag 1392660  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| ||||||||||||| ||| ||||    
T  1392659 agtgttaaaaagtgagtgttactaacatt 1392631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 12327283 - 12327355
Alignment:
Q  217 ttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    ||||||||||||| |||||||| |||| |||||| |||  |||| ||||||||||||||||| ||||||||||    
T  12327283 ttggaaatagaacccacacaaaatggtaggacatacattgattctatccaataaaagagtgactgctagagag 12327355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 32112766 - 32112850
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaa 272  Q
    |||| ||||||||||||||  ||||||||||| ||||| ||| |||||||| ||||| |||||||||  ||| ||||||||||||    
T  32112766 attgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtgacatgcattgatttcatccaataaaa 32112850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 16852022 - 16852105
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaa 271  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |  ||||||||||||||||| |||  ||| |||| ||||||    
T  16852022 attggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttcatctaataaa 16852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 289
Target Start/End: Complemental strand, 12690384 - 12690282
Alignment:
Q  188 attggtttaaatcattgtgagtct-acactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga 286  Q
    ||||||||||||||  ||| |||| ||||||||||||||||   |||  ||||||||| ||||||||| |||| |||||||||||||||  |||| ||||    
T  12690384 attggtttaaatcaaggtgggtctcacactttggaaatagattccacttaaagtggtgagacatgcattaatttcatccaataaaagagcaagtgttaga 12690285  T
Q  287 gag 289  Q
    |||    
T  12690284 gag 12690282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 31444085 - 31443997
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||||||| ||||||||| |||||||| |||| ||||  ||||||| |||||| ||||  || |||| |||||||||||||| ||||||    
T  31444085 tttaaatccttgtgagtcaacactttgaaaattgaaccgacacaaaatggtggaacataaattaatttcatccaataaaagaatgagtg 31443997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 19090267 - 19090213
Alignment:
Q  264 ccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||    
T  19090267 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 19090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 19737487 - 19737433
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||| |||||||  |||||||||| ||||||||||||||||    
T  19737487 ccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcatt 19737433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 10060968 - 10060855
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga--gagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||| ||||||| ||||||| |||  ||| ||   ||||||||||||| || || |  ||||||||||||| |||||||    
T  10060968 ctacactttgaaaatggaacccacataaagtggcgggacatacattgatttcacataataaaagagtgattgttataaagagtgttcaaaagagagtgtt 10060869  T
Q  308 gctagcattactct 321  Q
    ||||||||| ||||    
T  10060868 gctagcattcctct 10060855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 16436195 - 16436137
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtggg 246  Q
    ||||||||||||| || || ||||||||||| |||||||||| |||||||| |||||||    
T  16436195 attggtttaaatctttttgggtctacactttagaaatagaacccacacaaaatggtggg 16436137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 12780808 - 12780892
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaa 272  Q
    |||||||||||||||||||  ||||||||||| |||| ||||  ||||||||| ||| ||||| |||  |||||| | |||||||    
T  12780808 attggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattccacctaataaaa 12780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 2676026 - 2675936
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcat-gaattccatccaataaaagagtga 278  Q
    ||||||||||| ||||||| ||||||| |||| ||||  |||  | ||||||||||||||||| ||| |||||| || ||||||||||||||    
T  2676026 attggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaattc-attcaataaaagagtga 2675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 316
Target Start/End: Original strand, 4595875 - 4595922
Alignment:
Q  269 aaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||| |||||  ||||||| ||||||||||||||||    
T  4595875 aaaagagtgagtgctaaagagttctcaaaagagagtgttgctagcatt 4595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 16187481 - 16187540
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtggga 247  Q
    |||||||||||| |||||  |||||||||||| |||| ||||| ||||||| ||||||||    
T  16187481 attggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggga 16187540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 16187699 - 16187758
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtggga 247  Q
    |||||||||||| |||||  |||||||||||| |||| ||||| ||||||| ||||||||    
T  16187699 attggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatggtggga 16187758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 289
Target Start/End: Complemental strand, 4595850 - 4595772
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    ||||||||| |||| |||| || | ||||||||| ||||| |||  ||| ||  |||||||||||||||||||||||||    
T  4595850 tacactttgaaaatggaacccataaaaagtggtgagacatacattgatttcactcaataaaagagtgagtgctagagag 4595772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 12784988 - 12785077
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtg 277  Q
    |||||||||||||||| ||  ||||||||||| |||| ||||| ||| ||||| ||  ||||| |||  |||||| ||||||||| ||||    
T  12784988 attggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacattgattccacccaataaaaaagtg 12785077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 16187485 - 16187428
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||  ||||||||  ||||||||||| ||||| ||||||||||| |||||||||    
T  16187485 ccaataagcgagtgagtattagagagtgttgaaaagagagtgttgctaacattactct 16187428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 289
Target Start/End: Original strand, 17144724 - 17144821
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    ||||||||||||||| |||||||||||| ||||  |||  |||||||  ||||| ||||  ||  ||| ||| |||||||| ||| ||||||||||||    
T  17144724 gtttaaatcattgtgggtctacactttgaaaatttaacctacacaaaacggtggaacatatattgatttcattcaataaaatagtaagtgctagagag 17144821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 1392781 - 1392813
Alignment:
Q  289 gtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||| |||||||||||||||||||||    
T  1392781 gtgttcaaaagagagtgttgctagcattactct 1392813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 34905463 - 34905522
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||| |||||||||  |||||||  |||||||||| ||||||||||||||| |||||    
T  34905463 ccaataagagagtgagtattagagagggtgttcaaaagagagtgttgctagcatcactct 34905522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 26767803 - 26767940
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||||||||||| |||| |||| |||| | |||||||||||||||||| |||  ||| |||||| ||||||||| |||    
T  26767803 ctcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgatttcatccagtaaaagagtaagt 26767902  T
Q  281 gctagagag--tgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||  |||| ||||||||||||||||||||||    
T  26767903 gctagagagaatgttgaaaagtgagtgttgctagcatt 26767940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 12989322 - 12989192
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt--gctag 285  Q
    ||||||||||||||||||| |||||||||| ||||||||||  || ||||||||||||||||| |||  ||| |||||||| |||||||||||  |  ||    
T  12989322 attggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagagtgagtgagaaag 12989223  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||||||||||||    
T  12989222 agagtgttgaaaagtgagtgttgctagcatt 12989192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 4877390 - 4877294
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgtt 307  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||  || |||||||||||||    
T  4877390 tacactttagaaatagaactcacacaaagtgatgagacatgcatgaattccatcaaataaaagagtgagtgctagaaagaatttaaaagtgagtgtt 4877294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 9470212 - 9470077
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||||||| |||| |||| || ||||||||||||||||| |||  ||| ||||||||||||||||||||| |  ||    
T  9470212 attggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagag 9470113  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||| ||| |||| ||||| ||||||||||| ||||    
T  9470112 agagcgttgaaaaatgagtattgctagcatttctct 9470077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 10981649 - 10981514
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||   || ||| ||||| || |||||||| |  ||    
T  10981649 attggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatttttttcattcaatagaaaagtgagtgttagag 10981550  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||| ||| || |||| ||||    
T  10981549 agagtgttcaaaagtgagttttgttatcattcctct 10981514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 6980177 - 6980299
Alignment:
Q  196 aaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgtt 293  Q
    ||||||||||| ||||| |||||| |||| |||||||||||||||||| | |||| | |  ||| |||||||||||||||||||||||  ||||||||||    
T  6980177 aaatcattgtgggtctatactttgaaaattgaactcacacaaagtggtagaacataccttgatttcatccaataaaagagtgagtgctagagagagtgtt 6980276  T
Q  294 caaaagtgagtgttgctagcatt 316  Q
     |||||||| |||||||||||||    
T  6980277 gaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 42182998 - 42182890
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || ||||||||||||||||||||||  |||||| ||||||| |||||||    
T  42182998 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgtt 42182899  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  42182898 gctagcatt 42182890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 11539557 - 11539424
Alignment:
Q  188 attggtttaaatca-ttgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgc--atgaattccatccaataaaagagtgagtgcta 284  Q
    |||||||||||||| || ||  ||||||||||| ||||||||||||||||||||| ||| |||| |  ||  ||| ||||||||||||||||||||||||    
T  11539557 attggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaataaaagagtgagtgcta 11539458  T
Q  285 g--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |  ||||||||||||| ||||||||| |||||||    
T  11539457 gaaagagtgttcaaaaatgagtgttgttagcatt 11539424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 34142188 - 34142318
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||| |||||||| ||||||||||| |||| |||| |||||||||| ||| ||||| |||||||| |||||||||||| ||||| || |  ||    
T  34142188 attggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtagtgagacatacatgaatttcatccaataaaaaagtgaatgtttgag 34142287  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||| |||| |||||| |||||||||| ||||    
T  34142288 agattgttgaaaagtaagtgttgctaacatt 34142318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 44274365 - 44274231
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||  ||||||||||| || | |||| |||||||||||||||||||| |||  |||  ||||||| ||||||||| || |||||    
T  44274365 attggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacattgattttatccaatgaaagagtgaatgttagag 44274266  T
Q  288 agtgttc-aaaagtgagtgttgctagcattactct 321  Q
    || || |  ||||||||||||||||||||| ||||    
T  44274265 agagtgctcaaagtgagtgttgctagcatttctct 44274231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 45554690 - 45554568
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    ||||||||||||||||||| |||||||||| | |||| |        |||||||||||||||| |||  ||| |||||||||||||||||||||||||      
T  45554690 attggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgggacatacattgatttcatccaataaaagagtgagtgctagag 45554599  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||||||||||||    
T  45554598 agagtgttgaaaagtgagtgttgctagcatt 45554568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 18511258 - 18511388
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta--g 285  Q
    ||||||||||| ||||||  |||| ||||||| |||| |||| |||| ||| | ||||||||| |||  |||  |||||||||||||||||||| ||  |    
T  18511258 attggtttaaaacattgtaggtcttcactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtg 18511357  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||||||||||||||||    
T  18511358 agagtgttaaaaagtgagtgttgctagcatt 18511388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 25730481 - 25730602
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||| ||||||| ||||| ||  ||||||||| |||| ||  ||||| ||||| |||| |||||||||||||||| |||||||    
T  25730481 ctcttttattggtttaaatcactgtgagtttacacgttaaaaatagaacccacataatatggtgagacatacatgtattccatccaataaaaaagtgagt 25730580  T
Q  281 gctag--agagtgttcaaaagt 300  Q
    | |||  |||||||||||||||    
T  25730581 gttagaaagagtgttcaaaagt 25730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 316
Target Start/End: Original strand, 28898107 - 28898216
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgt 306  Q
    ||||||||||||||||  ||| |||| ||||||||||||||| |||  ||| || ||||||||||||||||||||  |||||||| ||||||  ||||||    
T  28898107 tctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgt 28898206  T
Q  307 tgctagcatt 316  Q
    ||||||||||    
T  28898207 tgctagcatt 28898216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 2476664 - 2476532
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    |||| |||||||||| | |||||||| |||| |||| ||| | ||||||||| ||||||||| |||  |||  ||| ||||||||||| |||||||||||    
T  2476664 ttggattaaatcattataagtctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgctagaga 2476565  T
Q  289 gtgttcaaaagtgagtgttgctagcattactct 321  Q
     |||| |||||||||||||  ||||||| ||||    
T  2476564 atgttgaaaagtgagtgttagtagcattcctct 2476532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 17188196 - 17188076
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||| || | |||||||||| |||| ||  ||||||||||||||| || |  |||  ||| |||||||||||| |||||||| |||||    
T  17188196 attggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtgagtgatagag 17188097  T
Q  288 agtgttcaaaagtgagtgttg 308  Q
    || ||| ||||||||||||||    
T  17188096 agagttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 24895308 - 24895444
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgag 279  Q
    |||||| ||||| |||||||| |||| ||| |||||||||||||| ||||||||| ||| |||||| | || |||  |||  ||||| ||||||||||||    
T  24895308 ctctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgattttatccattaaaagagtgag 24895407  T
Q  280 tgctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |  |||||| ||| |||||| ||||||||||||||||    
T  24895408 tattagagactgtccaaaagagagtgttgctagcatt 24895444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 30718376 - 30718497
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||||||||||||||| ||||| ||  |||||||| || | ||||||  ||  ||| |||||||||||||||||||| ||||||    
T  30718376 attggtttaaatcattgtgagtctacactttgaaaatacaatccacacaaaatgat-ggacatatatcgatttcatccaataaaagagtgagtactagag 30718474  T
Q  288 ag--tgttcaaaagtgagtgttg 308  Q
    ||  |||| |||| |||||||||    
T  30718475 agaatgtttaaaattgagtgttg 30718497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 209 - 316
Target Start/End: Complemental strand, 15509024 - 15508915
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgt 306  Q
    |||||||||||||||| |||| |||| ||| ||||||||||| |||  ||| ||  ||||||||||||||||| |||  |||||||||||||| ||||||    
T  15509024 tctacactttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaagagtgttcaaaagagagtgt 15508925  T
Q  307 tgctagcatt 316  Q
    ||||| ||||    
T  15508924 tgctaacatt 15508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 321
Target Start/End: Complemental strand, 31494289 - 31494204
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||| ||||||||| ||| | || |||||||||| |||||||||| ||||||||||| ||||| |||||||||||||| ||||||    
T  31494289 aaagtagtgggacatacattattttcatccaataagagagtgagtgttagagagtgttgaaaagagagtgttgctagcactactct 31494204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 316
Target Start/End: Complemental strand, 37228605 - 37228499
Alignment:
Q  213 cactttggaaatagaactcacacaaagtggtgggacatgcatgaattc-catccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgc 309  Q
    ||||||| |||  |||| |||| ||||||||||||||| ||| ||||  || ||||||||||||||||||||||  |||||| ||||||| |||||||||    
T  37228605 cactttgaaaacggaacccacataaagtggtgggacatacattaattttcacccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgc 37228506  T
Q  310 tagcatt 316  Q
    |||||||    
T  37228505 tagcatt 37228499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 37652294 - 37652420
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||||||| ||||||| |||||||| ||||  |||||||| ||||| |||| |||  ||| |||| ||||||| ||| ||||||  |     
T  37652294 attggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgatttcatctaataaaaaagtaagtgctaaaa 37652393  T
Q  286 agagtgttcaaaagtgagtgttgctag 312  Q
    | |||||| ||| ||||||||||||||    
T  37652394 aaagtgttgaaatgtgagtgttgctag 37652420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 1110303 - 1110194
Alignment:
Q  214 actttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgcta 311  Q
    ||||||||||| |||| |||| ||||||||||||||| |||  ||| ||  ||||||||||||||||| |||||||  || || |||| |||||||||||    
T  1110303 actttggaaatggaacccacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgttagagagaatgctcgaaagagagtgttgcta 1110204  T
Q  312 gcattactct 321  Q
    ||||| ||||    
T  1110203 gcattcctct 1110194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 7919319 - 7919447
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||  ||||||||||| |||| |||  ||||||||||||||||||||  ||  |||  |||| || | ||||| |||  |||||    
T  7919319 attggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggacat--attgattgtatcccatgagagagtaagtattagag 7919416  T
Q  288 --agtgttcaaaagtgagtgttgctagcatt 316  Q
      | |||||||||||||||||||||||||||    
T  7919417 gaaatgttcaaaagtgagtgttgctagcatt 7919447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 16719479 - 16719609
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| | ||||||| |||| |||| ||||  |||  || |||||||| || |||  ||| |||| |||||||||||  |||||  ||    
T  16719479 attggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaag 16719578  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    | |||||| ||||||||||||||||||||||    
T  16719579 acagtgttgaaaagtgagtgttgctagcatt 16719609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 19427369 - 19427424
Alignment:
Q  261 catccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  19427369 catccaatgatagagtgagtgctagagagtgttaaaaagagagtgttgctagcatt 19427424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 19639224 - 19639094
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||  |||| ||||||| |||| |||||||||| | ||| || ||||| |||  ||| |||| ||||||| ||||| ||||  ||    
T  19639224 attggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtgaatgctggag 19639125  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||| | || |||||||    
T  19639124 agagtgttaaaaagtgagcgctgttagcatt 19639094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 19837817 - 19837687
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||||  |||| ||||||| |||| |||||||||| | ||| || ||||| |||  ||| |||| ||||||| ||||| ||||  ||    
T  19837817 attggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaaatagtgaatgctggag 19837718  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| ||||||||| | || |||||||    
T  19837717 agagtgttaaaaagtgagcgctgttagcatt 19837687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 32856184 - 32856318
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgc----- 282  Q
    |||||||||||||| | ||  ||||||||||| ||||  ||| ||||||||||||||  ||||  || |||| ||||| |||||||||| |||||         
T  32856184 attggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtggtgaaacatatattaatttcatccgataaaagagtcagtgcgtact 32856283  T
Q  283 -tagagagtgttcaaaagtgagtgttgctagcatt 316  Q
      ||||||||||||||||||||||||| |||||||    
T  32856284 ggagagagtgttcaaaagtgagtgttgttagcatt 32856318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 33678165 - 33678294
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga- 286  Q
    |||||||||||| ||||||||||||||| || |||||||||| ||| ||  ||||| || ||| |||  ||| ||| |||| ||||| | |||| || |     
T  33678165 attggtttaaattattgtgagtctacacatttgaaatagaacccacgcat-gtggttgggcatacattgatttcattcaattaaagaataagtgttataa 33678263  T
Q  287 -gagtgttcaaaagtgagtgttgctagcatt 316  Q
     ||||||||||||||||||||||||||||||    
T  33678264 agagtgttcaaaagtgagtgttgctagcatt 33678294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 15884560 - 15884498
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||||||||||||||    
T  15884560 attggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 36471880 - 36472017
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||||||||||| |||| |||| |||| |||  || | ||||||||| ||||| | |  ||| |||||||||| ||| |||||    
T  36471880 ctcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatccaataagagattgagt 36471979  T
Q  281 g--ctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |    |||||||||| ||||||||||||| ||| ||||    
T  36471980 gtcagagagagtgttgaaaagtgagtgttactatcatt 36472017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 4964744 - 4964852
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgtt 307  Q
    |||||||||| ||||  ||  |||| ||||||||||||||| |||  ||| || ||||||||| |||||||||||||||| ||  ||||||| || ||||    
T  4964744 ctacactttgaaaatgaaatccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagagagagtactcaaaagagaatgtt 4964843  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  4964844 gctagcatt 4964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20951659 - 20951602
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||| | |||||||||||||| ||||||| |||||||||||||||| ||||    
T  20951659 ccaataaaagaataagtgctagagagtgctcaaaagagagtgttgctagcattcctct 20951602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 31395516 - 31395624
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||| ||||||| |||  |||| ||||||| ||||||| |||  ||| || |||||||| |||||||||||  |||||||| ||||||| |||||||    
T  31395516 ctacactatggaaatggaatccacataaagtggagggacatacattgatttcacccaataaaggagtgagtgctaaagagagtgctcaaaagagagtgtt 31395615  T
Q  308 gctagcatt 316  Q
    |||| ||||    
T  31395616 gctaacatt 31395624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 3804711 - 3804584
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtggg-acatgcatgaattccatccaataaaagagtgagtgcta--gagag 289  Q
    ||||||| |||||| || ||||||||| ||||  |||  ||| |||||| |||| |||| |||  ||| |||||||||||||||||| || ||  |||||    
T  3804711 tttaaattattgtgggtgtacactttgaaaattaaacctacataaagtgatggggacatacattgatttcatccaataaaagagtgaatgttaaagagag 3804612  T
Q  290 tgttcaaaagtgagtgttgctagcatta 317  Q
    |||| |||||||||||| ||||||||||    
T  3804611 tgttgaaaagtgagtgtagctagcatta 3804584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 27968973 - 27968914
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||| ||  ||||||| |||||||||||||||| ||||    
T  27968973 ccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctct 27968914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 28091614 - 28091673
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||| ||  ||||||| |||||||||||||||| ||||    
T  28091614 ccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctct 28091673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 28101846 - 28101905
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||| ||  ||||||| |||||||||||||||| ||||    
T  28101846 ccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatttctct 28101905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 38464294 - 38464210
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaa 272  Q
    ||||||||||||||||||| |||||||||||| |||| |||| ||| ||||||| || ||||| |||  ||| ||| ||||||||    
T  38464294 attggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtgatgagacatacattgatttcatacaataaaa 38464210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 1107121 - 1107039
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||| |||  ||| || |||||||||||||| |||||||  |||||| ||||||| ||||||||||| ||||    
T  1107121 aaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgctaacatt 1107039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 37719892 - 37719830
Alignment:
Q  261 catccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||  |||||| ||||||| || ||||||||||||| ||||    
T  37719892 catccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctct 37719830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 45270605 - 45270734
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||||||||||| ||||||||  |||| ||| ||||||||| | |||  |||| ||| ||||  ||||||||||| ||| |||| |||||    
T  45270605 attggtttaaatcattgtgagtttacactttcaaaatcgaattcacacaaaatagtgatacatacattaattttatccaataaaaaagt-agtgttagag 45270703  T
Q  288 --agtgttcaaaagtgagtgttgctagcatt 316  Q
      | |||| |||||||| ||||| |||||||    
T  45270704 aaaatgttgaaaagtgaatgttgatagcatt 45270734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 28898092 - 28898035
Alignment:
Q  261 catccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||||||||  |||||||  ||||||| ||||||||||||||||    
T  28898092 catccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcatt 28898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 4964727 - 4964671
Alignment:
Q  262 atccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||||  ||||| |||||||| |||| |||||||||||    
T  4964727 atccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 41805873 - 41805961
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    ||||||||||||||| |||  |||  |||||||||||||||||||| |  ||| ||||| |||||  |||||||||||||||| |||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctcta 41805961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 26767814 - 26767755
Alignment:
Q  264 ccaataaaagagtgagtgctaga--gagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||  ||||  |||||||||||||  ||||||||||||||||||||    
T  26767814 ccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcattactct 26767755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 35316450 - 35316578
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| |||||||||||||| ||||||| |||  |||| |||   ||| ||| ||||||||||| ||| ||||  ||| |||||||||||||||  |||||    
T  35316450 attgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtgggacatacattaattttatctaataaaagagtgagtaatagag 35316549  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    | |||| |||| | ||||||  |||||||    
T  35316550 aatgttgaaaaataagtgttcatagcatt 35316578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 2122926 - 2122797
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| |||||||||| ||||   |||||| | |||||||||  || |||||||||||  |||| |||  ||| ||||| || ||||||||| || |||||    
T  2122926 attgatttaaatcatagtgaacttacactctagaaatagaatgcatacaaagtggtgatacatacattgatttcatcctatgaaagagtgattgatagag 2122827  T
Q  288 a--gtgttcaaaagtgagtgttgctagcat 315  Q
    |  || || |||||||||||||||||||||    
T  2122826 aaagtattgaaaagtgagtgttgctagcat 2122797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 25238326 - 25238372
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcaca 234  Q
    |||||||||||||||||||  ||||||||||| ||||||||| ||||    
T  25238326 attggtttaaatcattgtggatctacactttgaaaatagaacccaca 25238372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 186
Target Start/End: Complemental strand, 30706460 - 30706431
Alignment:
Q  157 ataaagagtagtgctagcaacactctcttt 186  Q
    ||||||||||||||||||||||||||||||    
T  30706460 ataaagagtagtgctagcaacactctcttt 30706431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 24497303 - 24497196
Alignment:
Q  208 gtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta--gagagtgttcaaaagtgagtg 305  Q
    |||||||||||| ||||| ||  |||||||| || ||| |||| ||| | || |||||||||||| || || || ||  ||||||| |||||||||||||    
T  24497303 gtctacactttgaaaataaaatccacacaaaatgatggaacatacattagtttcatccaataaaaaagcgactgttaaagagagtggtcaaaagtgagtg 24497204  T
Q  306 ttgctagc 313  Q
    ||| ||||    
T  24497203 ttgttagc 24497196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 43400284 - 43400320
Alignment:
Q  285 gagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  43400284 gagagtgttgaaaagagagtgttgctagcattactct 43400320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 27943 - 27847
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta 284  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  27943 attggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaataaaagcgtgagtgcta 27847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 22540499 - 22540369
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  22540499 attggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaag 22540400  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| |||||||||||||    
T  22540399 agagtgtgcaaaagtgaatgttgctagcatt 22540369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 2225355 - 2225222
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||| |||  |||||||||||| |||  |||| |||||||||||||||||||| |||  ||| ||||||||||||||||| |||||||||    
T  2225355 attggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaagagtgggtgctagag 2225256  T
Q  288 agtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||| |||| |||||||| |||||||| ||||    
T  2225255 agtgttgaaaattgagtgttactagcattcctct 2225222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 181 - 289
Target Start/End: Complemental strand, 15928693 - 15928585
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||||| ||| ||||||||| ||| |||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||| ||    
T  15928693 ctcttttattggtttaaatcactgtaagtctacaccttgaaaatagaactcacacaaaatggtgagacatacatgaattccatcaaataaaagagtgggt 15928594  T
Q  281 gctagagag 289  Q
    |||||||||    
T  15928593 gctagagag 15928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 41958214 - 41958086
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||||| |||| |||||||||||| |||| |||| | |||||| ||||||||||| |||  ||| ||||||||||| ||||||||||| |||    
T  41958214 attggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcttgag 41958115  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| ||||||||||||| ||||||||    
T  41958114 agtgttgaaaagtgagtgttactagcatt 41958086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 15523341 - 15523211
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  |||||||||| |||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  15523341 attggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaag 15523242  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| ||||| |||||||    
T  15523241 agagtgtgcaaaagtgaatgttgatagcatt 15523211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 15531335 - 15531205
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  |||||||||| |||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  15531335 attggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaag 15531236  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| ||||| |||||||    
T  15531235 agagtgtgcaaaagtgaatgttgatagcatt 15531205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 19101650 - 19101780
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||||    ||||||||||| ||||||||||| || ||||||||||||||| |||  ||| |||||||||||| ||||||||||  ||    
T  19101650 attggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctaaag 19101749  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| |||||||||||||    
T  19101750 agagtgtgcaaaagtgaatgttgctagcatt 19101780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 24911588 - 24911480
Alignment:
Q  194 ttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgtt 293  Q
    ||||||||||| |  |||| |||||||||||| ||| |||| ||||||||||||||| |||| ||| |||| ||||||||| ||||||||||||||||||    
T  24911588 ttaaatcattgcgtatctatactttggaaataaaacccacaaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagagagtgtt 24911489  T
Q  294 caaaagtga 302  Q
    |||||||||    
T  24911488 caaaagtga 24911480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 210 - 321
Target Start/End: Complemental strand, 44739227 - 44739114
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||| |||| ||  ||| |||||||||||||||||  |||||||||||||| |||||||    
T  44739227 ctacactttggaaatacaactcacataaagtggtgggacatacattaatttcactcaagaaaagagtgagtgctagagagagtgttcaaaagagagtgtt 44739128  T
Q  308 gctagcattactct 321  Q
    |||| |||| ||||    
T  44739127 gctaacattcctct 44739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 3872669 - 3872812
Alignment:
Q  174 caacactctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaag 273  Q
    |||| |||||||| |||||||| |||||||||| ||||||||||||||||| ||||  ||||||||||||| |||||  ||  |||  ||  |||| |||    
T  3872669 caactctctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattgatt-tatttaatagaag 3872767  T
Q  274 agtgagtgct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||    
T  3872768 agtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 3872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 1093126 - 1093250
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtg 291  Q
    |||||||||||||||   |||||||||||||||| |||||| |||||||||||| |||| |||  ||| |||| |||||| ||||| |||||| ||||||    
T  1093126 gtttaaatcattgtggaactacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtgcgtgctaaagagtg 1093225  T
Q  292 ttcaaaagtgagtgttgctagcatt 316  Q
    | ||||| | |||||||||||||||    
T  1093226 tgcaaaaataagtgttgctagcatt 1093250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 323
Target Start/End: Original strand, 6133674 - 6133810
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||| |||||||| || || |||||| |||| |||| |||||||  |||||||||||  ||  ||| ||||||||||||| |||||||||||||    
T  6133674 attggtttaa-tcattgtgggtgtagactttgaaaattgaacccacacaatatggtgggacatatattgatttcatccaataaaagggtgagtgctagag 6133772  T
Q  288 ag--tgttcaaaagtgagtgttgctagcattactctaa 323  Q
    ||  |||| |||||||||||||||||||||| ||||||    
T  6133773 agattgttgaaaagtgagtgttgctagcattcctctaa 6133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 11135848 - 11135740
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || ||||||||| ||||||||||||  |||||| ||||||| |||||||    
T  11135848 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaatagtgagtgctagagagagtgctcaaaagagagtgtt 11135749  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  11135748 gctagcatt 11135740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 11430550 - 11430442
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || ||||||||||||||||||||||  |||||| ||||||| |||||||    
T  11430550 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgtt 11430451  T
Q  308 gctagcatt 316  Q
    | |||||||    
T  11430450 gttagcatt 11430442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 25543470 - 25543336
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||||| || ||| |||| |||| | || |||||||||||||||||||  ||  ||| |||| ||||||||||| |||| |||||    
T  25543470 attggtttaaatcattgtgaggctgcacattgggaatatacct-acacaaagtggtgggacatatattgatttcatcaaataaaagagtaagtgttagag 25543372  T
Q  288 ag--tgttcaaaagtgagtgttgctagcattactct 321  Q
    ||  |||| |||||||||||||||||||||| ||||    
T  25543371 agagtgtttaaaagtgagtgttgctagcattcctct 25543336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 10659817 - 10659953
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaat-aaaagagtgagtgct--a 284  Q
    ||||||||||||||| ||| |||||||||||| |||| ||||  |||||||||||| |||||| |||  ||| ||||| || |||| |||||||| |  |    
T  10659817 attggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgatttcatcccataaaaaaagtgagtgttaga 10659916  T
Q  285 gagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||| || ||||||||||||||||| |||||||||    
T  10659917 gagagtattgaaaagtgagtgttgctaacattactct 10659953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 32211833 - 32211934
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||||| ||  |||| ||||||||||||||| || |||||| |||  ||| |||| |||||||||||||||||| |||    
T  32211833 attggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtagttggacatacattgatttcatctaataaaagagtgagtgctggag 32211932  T
Q  288 ag 289  Q
    ||    
T  32211933 ag 32211934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 315
Target Start/End: Complemental strand, 35336991 - 35336868
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| ||||||| |  | |||| |||| |||||||||||||| |||||   || ||| |||||||||||| | ||||||||||||    
T  35336991 attggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtgagacat---tg-atttcatccaataaaataatgagtgctagag 35336896  T
Q  288 agtgttcaaaagtgagtgttgctagcat 315  Q
      |||| |||||||||||||||||||||    
T  35336895 gatgttgaaaagtgagtgttgctagcat 35336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 41918104 - 41917996
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga--gtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||  |||| ||||||||||||||| |||  ||| || |||||||||||||||||||||||||  ||| ||||||| |||||||    
T  41918104 ctacactttgaaaatggaatccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctagagagggtgctcaaaagagagtgtt 41918005  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  41918004 gctagcatt 41917996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 210 - 323
Target Start/End: Original strand, 14094072 - 14094187
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || ||||||||| ||||||||||  ||||||||||||||||  | |||     
T  14094072 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctggagagagtgttcaaaagataatgtc 14094171  T
Q  308 gctagcattactctaa 323  Q
    ||||||||| ||||||    
T  14094172 gctagcattcctctaa 14094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 321
Target Start/End: Complemental strand, 931512 - 931370
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||| || || | |||| |||| |||| |||| ||| || |||||||| |||   |||||| ||||||||||||||||    
T  931512 ctcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatgatgggacatacattgcttccattcaataaaagagtgagt 931413  T
Q  281 gctagag--agtgttcaaaagtgagtgttgctagcattactct 321  Q
      |||||  || ||| |||||||||||||||||||||| ||||    
T  931412 attagagatagagttgaaaagtgagtgttgctagcattcctct 931370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 4578674 - 4578765
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactctaagata 327  Q
    ||||||||||||| | |||  ||| || |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||| ||||    
T  4578674 aaagtggtgggacctacattgatttcacccaataaaagagtgagtgttagagagtgttgaaaagagagtgttgctagcactactctaggata 4578765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 6325863 - 6325985
Alignment:
Q  189 ttggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    |||||||| ||||||||| || ||||||||| ||| |||||||||||||| ||||||||||| |||  |||  ||  |||||| |||||| |  ||||||    
T  6325863 ttggtttacatcattgtgggtttacactttgaaaa-agaactcacacaaaatggtgggacatacattgattttatttaataaatgagtgattattagaga 6325961  T
Q  289 gtgttcaaaagtgagtgttgctag 312  Q
    ||||||||||||||| ||||||||    
T  6325962 gtgttcaaaagtgagcgttgctag 6325985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 26980311 - 26980441
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||| ||||||||||||||  | || | |||| |||| ||||||||||||| ||||||||||| |||  ||| |||||||||| |||||||||  |  ||    
T  26980311 attgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatggtgggacatacattgatttcatccaataatagagtgagtattagag 26980410  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||| |||||||||||||| |||||||    
T  26980411 agagtgttgaaaagtgagtgttgttagcatt 26980441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 30678960 - 30679051
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgag 279  Q
    ||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||  |||  ||||| | ||||||||||    
T  30678960 attggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaaagagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 11987755 - 11987635
Alignment:
Q  190 tggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agag 287  Q
    ||||||||||||||||| |||||||||||| |||| |||| | ||| ||||||||| |||| ||| |||| ||||||||||| || | | || |  ||||    
T  11987755 tggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttcatccaataaatgaataaatgttggagag 11987656  T
Q  288 agtgttcaaaagtgagtgttg 308  Q
    |||||| ||||||||||||||    
T  11987655 agtgttgaaaagtgagtgttg 11987635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 32848654 - 32848762
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||  |||| ||||||||||||||| ||   ||| || ||||||||||||||||||||  |||||||||||||||| |||||||    
T  32848654 ctacactttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgtt 32848753  T
Q  308 gctagcatt 316  Q
    | |||||||    
T  32848754 gttagcatt 32848762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 41095680 - 41095788
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||| |||| |||| |||||| |||| |||||||| |||  ||| || |||||||| |||||||||||  |||||||| ||||||| |||||||    
T  41095680 ctacactttgaaaatggaacccacacagagtgatgggacatacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgtt 41095779  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  41095780 gctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 311
Target Start/End: Original strand, 28218118 - 28218222
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgt 306  Q
    ||||||||||| |||| |||  |||||||||||||| ||||| |||  ||| |||||||||||||||||| ||||  |||||| ||| |||| |||||||    
T  28218118 tctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagagtgaatgctaaagagagggttgaaaaatgagtgt 28218217  T
Q  307 tgcta 311  Q
    |||||    
T  28218218 tgcta 28218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 29418591 - 29418522
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtga 278  Q
    |||||||||||||||||||||||||| ||||||||| || || ||| ||||  |||||||||||||||||    
T  29418591 tctacactttggaaatagaactcacataaagtggtgagatatacattaattttatccaataaaagagtga 29418522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 49730995 - 49730902
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |||||||||| ||| |||||  || | ||  ||| ||||||||||||||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtg 49730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 306
Target Start/End: Complemental strand, 51732415 - 51732290
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||||||||||| |||||| || || |||||| ||||  |||||||| ||||| |||| | || ||| |||| |||| ||||||| ||||| |    
T  51732415 ctcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtagtggaaaatacattaatttcatcaaataaaaaagtgaat 51732316  T
Q  281 gctagagagtgttcaaaagtgagtgt 306  Q
    | ||||||| ||| ||||||||||||    
T  51732315 gttagagagcgttgaaaagtgagtgt 51732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 33193181 - 33193089
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    ||||||||||||||||||| |||||||||||| |||| |||| | |||||| |||||| |||| |||  ||| |||||||||||  |||||||    
T  33193181 attggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgatttcatccaataaataagtgagt 33193089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 299
Target Start/End: Original strand, 50424914 - 50425026
Alignment:
Q  188 attggtttaaatcattgtgagtc-tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga 286  Q
    ||||| |||||||| |||| ||| |||||||||||||| ||||| ||| |||||||||||  ||| ||  |||  |||||||||||||||||||| ||||    
T  50424914 attgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaagtggtggggtatggattgattttatccaataaaagagtgagtgttaga 50425013  T
Q  287 gagtgttcaaaag 299  Q
    ||| || ||||||    
T  50425014 gagagtccaaaag 50425026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 316
Target Start/End: Complemental strand, 46335223 - 46335095
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataa---aagagtgagtgctag--ag 287  Q
    |||||||||||||| ||||| || ||| ||||| |||||  |||||||||| ||| ||  ||  ||| ||||||||||   |||||||||||||||  ||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataaaagaagagtgagtgctagaaag 46335124  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||  |||||||||||    
T  46335123 agtgttcaaaagtgaggtttgctagcatt 46335095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 39039477 - 39039534
Alignment:
Q  261 catccaataaaagagtgagtgctaga--gagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||    
T  39039477 catccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcatt 39039534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 308
Target Start/End: Complemental strand, 37525677 - 37525540
Alignment:
Q  171 tagcaacactctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataa 270  Q
    |||||||||||||| | ||| ||||||||||||||   |||| |||||| |||| |||| |||| ||| |||||| |||| ||||  ||  ||||||| |    
T  37525677 tagcaacactctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatga 37525578  T
Q  271 aagagtgagtgctagagagtgttcaaaagtgagtgttg 308  Q
    |||||||| || |||||| |  |||||| |||||||||    
T  37525577 aagagtgaatgttagagaatactcaaaaatgagtgttg 37525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 37552998 - 37553099
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| ||||||||||||||  ||||||||||| ||||| ||| |||  |||||| |||||||  ||| |||| |||||||||| | ||| ||||||||||    
T  37552998 attgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggacaaacattaatttcatccaataagaaagtaagtgctagag 37553097  T
Q  288 ag 289  Q
    ||    
T  37553098 ag 37553099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 322
Target Start/End: Complemental strand, 44272049 - 44271913
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||| |||||||||||||   ||||||||||| |||| ||||  ||| ||| |||||| |||| |||  ||| ||| |||||||| ||| ||||||  ||    
T  44272049 attgatttaaatcattgttgttctacactttgaaaattgaacctacaaaaaatggtggaacatacattgatttcattcaataaaatagtaagtgctaaag 44271950  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    |||||||| |||||||  ||||||||||||| |||||    
T  44271949 agagtgtttaaaagtggatgttgctagcattcctcta 44271913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11430568 - 11430627
Alignment:
Q  264 ccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||  |||||||| ||||||| |||||||||||||||| ||||    
T  11430568 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctct 11430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 12767370 - 12767422
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcac 233  Q
    |||||| |||||||||||||||| ||||||||||||||  |||||||||||||    
T  12767370 ctcttttattggtttaaatcattatgagtctacactttaaaaatagaactcac 12767422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 15928682 - 15928738
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||||||||||||||  ||||||||||||||||| |||||||| ||||| |||||    
T  15928682 ccaataaaagagtgagtattagagagtgttcaaaagagagtgttggtagcactactc 15928738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 8741276 - 8741404
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct----agag 287  Q
    ||||||||||||||| || || |||||| |||| |||| |||||||| | ||| ||||| |||  ||| |||||||||||| |||||   ||    ||||    
T  8741276 gtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattagtgagacatacattgatttcatccaataaaaaagtgaccactaaagagag 8741375  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    ||| || ||||||||||||||||||||||    
T  8741376 agttttgaaaagtgagtgttgctagcatt 8741404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 323
Target Start/End: Complemental strand, 9165394 - 9165296
Alignment:
Q  227 aactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||||| |||||||| |||||| |||  ||| || ||||||||||||||||||| ||  |||||| ||||||| |||||| | ||||||| ||||||    
T  9165394 aactcacataaagtggtaggacatacattgatttcacccaataaaagagtgagtgcaagatagagtggtcaaaagagagtgtggatagcattcctctaa 9165296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 33059942 - 33060071
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||| |||||||||| ||||||||  ||||  ||| |||| | |||||| |||||||| | |||| |||||||||||||||||| || || ||    
T  33059942 attggtttaaaacattgtgagtgtacactttaaaaattaaacccacagagagtggt-ggacatgctttaatttcatccaataaaagagtgactgttaaag 33060040  T
Q  288 a--gtgttcaaaagtgagtgttgctagcatt 316  Q
    |  || |  |||||||||| |||||||||||    
T  33060041 aatgtatagaaaagtgagtattgctagcatt 33060071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 11135867 - 11135920
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcat 315  Q
    |||||||||||||||||||||||||| ||  ||||||| |||||||||||||||    
T  11135867 ccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgctagcat 11135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 15661001 - 15660931
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||| |||||||||| ||| | || |||||||||||||||||||  |||  ||||||||||||||||||||    
T  15661001 tacattttggaaataaaacccgcataaagtggtgggacatgcattgattttatccaataaaagagtgagtg 15660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 21466693 - 21466750
Alignment:
Q  261 catccaataaaagagtgagtgcta--gagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||| |||||||||||  |||||||| ||||||||| |||||||||||||    
T  21466693 catccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcatt 21466750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 322
Target Start/End: Complemental strand, 8899145 - 8899009
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctaga- 286  Q
    |||||||||||| ||||||   |||||||||| |||| |||| ||||||||| |||||||||| | |  ||| |||| ||| ||| ||  |||| ||||     
T  8899145 attggtttaaattattgtggacctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaattaaatagcaagtgttagag 8899046  T
Q  287 -gagtgttcaaaagtgagtgttgctagcattactcta 322  Q
     || |||| ||||||||||||||||| |||| |||||    
T  8899045 ggaatgttgaaaagtgagtgttgctaacatttctcta 8899009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 50539251 - 50539162
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||||||||||| | |||||||||  | |||| |||| |||| |||||||||| |||| | |  ||| |||||||||||||||||||||    
T  50539251 gtttaaatcattgcgtgtctacactgagaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtg 50539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 50773163 - 50773103
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattactcta 322  Q
    ||||||||||| ||||||||||||||  |||||||||| |||| ||||||||||| |||||    
T  50773163 ccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatttctcta 50773103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 13889293 - 13889332
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactctaa 323  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  13889293 agagagtgttcaaaagagagtgttgctagcattcctctaa 13889332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 18157121 - 18157039
Alignment:
Q  236 aaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||| ||| |||| |||||||||||| |||| ||| |  |||||||||| ||||| ||||||  ||||||||    
T  18157121 aaagtggtgggacatacattaatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatt 18157039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 27570348 - 27570234
Alignment:
Q  196 aaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg--ctagagagtgtt 293  Q
    ||||||||||| || ||||||||  ||||  |||||||||||| |||||||||||   | |||| || ||||||||||| ||||||    ||||||||||    
T  27570348 aaatcattgtgggtttacactttaaaaattaaactcacacaaattggtgggacatatcttaatttcaaccaataaaagaatgagtgtcagagagagtgtt 27570249  T
Q  294 caaaagtgagtgttg 308  Q
     |||||||| |||||    
T  27570248 aaaaagtgactgttg 27570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 28109977 - 28109899
Alignment:
Q  209 tctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagaga 288  Q
    ||||||||||| |||| |||| |||| ||| |||||| ||||||||  ||| || ||||||||| |||||||||||||||    
T  28109977 tctacactttg-aaatggaacccacataaaatggtggaacatgcattgatttcacccaataaaaaagtgagtgctagaga 28109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 31074838 - 31074712
Alignment:
Q  197 aatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta--gagagtgttc 294  Q
    |||||||||| ||||||| |||| ||||||||   ||| |||||| | ||||||| ||  ||| |||| ||||||||||| | || ||  ||||||||||    
T  31074838 aatcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatgtattgatttcatcaaataaaagagtaaatgttagggagagtgttc 31074739  T
Q  295 aaaagtgagtgttgctagcattactct 321  Q
    |||  ||||||||| ||||||| ||||    
T  31074738 aaacatgagtgttgatagcatttctct 31074712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 11851963 - 11851925
Alignment:
Q  278 agtgctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  11851963 agtgttagagagtgttcaaaagtgaatgttgctagcatt 11851925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 13388392 - 13388335
Alignment:
Q  261 catccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcatt 316  Q
    |||||||||||| |||||||| ||||||| ||  ||||||| ||||||||||||||||    
T  13388392 catccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcatt 13388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 28218074 - 28218040
Alignment:
Q  287 gagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||| |||||||||||||||||||||    
T  28218074 gagtgttcaaaagagagtgttgctagcattactct 28218040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 321
Target Start/End: Original strand, 13114742 - 13114854
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttg 308  Q
    |||| ||||||||| |||  || | |||||||||||||||  ||  |||  ||| |||||||||||||||| |  ||||||||| |||||| |||||| |    
T  13114742 tacattttggaaatggaatccatataaagtggtgggacatatattgattttatctaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcg 13114841  T
Q  309 ctagcattactct 321  Q
    |||||||| ||||    
T  13114842 ctagcatttctct 13114854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 32848635 - 32848583
Alignment:
Q  264 ccaataaaagagtgagtgctagag--agtgttcaaaagtgagtgttgctagca 314  Q
    ||||||||||||| ||||||||||  |||| ||||||| ||||||||||||||    
T  32848635 ccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagca 32848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 41095661 - 41095601
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgt--tcaaaagtgagtgttgctagcattactcta 322  Q
    ||||||||  |||||||||||||||| ||  ||||||| |||||||||||||||| |||||    
T  41095661 ccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctcta 41095601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 50773188 - 50773261
Alignment:
Q  216 tttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    ||||||||| |||| |||| |||||||||| ||||  ||  |||  |||||||||||||||||||| |||||||    
T  50773188 tttggaaatggaacccacataaagtggtggaacatatattgattttatccaataaaagagtgagtgttagagag 50773261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 8899163 - 8899199
Alignment:
Q  284 agagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    |||||||||||||||| || |||||||||||||||||    
T  8899163 agagagtgttcaaaagagattgttgctagcattactc 8899199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 13114660 - 13114688
Alignment:
Q  158 taaagagtagtgctagcaacactctcttt 186  Q
    |||||||||||||||||||||||||||||    
T  13114660 taaagagtagtgctagcaacactctcttt 13114688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 15468346 - 15468258
Alignment:
Q  193 tttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||||| |||||| ||||||||| || |||| |||| ||||||||||  || ||||| |||  |||| ||  ||||||||||||||||    
T  15468346 tttaaattattgtgggtctacactatgaaaattgaacccacacaaagtaatgagacatacattgattctatttaataaaagagtgagtg 15468258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 41948195 - 41948287
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||| ||||||||||||||  | ||||||||| |||| ||||  |||||||||||| | | || |||  |||  |||||||||||||||||||    
T  41948195 attgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagagtgagt 41948287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 10142025 - 10142153
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||| ||||||| |||||  |||||||||||| |||| ||||  ||||||||||||||||||| |||  |||  ||||||||||||||||||||||| ||    
T  10142025 attgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagagtgagtgctatag 10142124  T
Q  288 agtgttcaaaagtgagtgttgctagcatt 316  Q
    |||||| |||| |||||||||||||||||    
T  10142125 agtgttgaaaaatgagtgttgctagcatt 10142153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 30325923 - 30326053
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||| || ||||||||| ||||| |||  ||| |||||||||||| ||||||||||  ||    
T  30325923 attggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtgctaaag 30326022  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| ||||||||| |||||||||||||    
T  30326023 agagtgtgcaaaagtgaatgttgctagcatt 30326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 5413786 - 5413878
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||||||||||||| || |||||||||||| |||| |||| |||||||||||||||||||| |||  ||| ||||||||||||||||||||    
T  5413786 attggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 321
Target Start/End: Original strand, 28490771 - 28490906
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||| |||||| |||||||||||  |||| ||||| ||||||||||||||||||| | |  ||| |||||||||||| ||||| ||||  ||    
T  28490771 attggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaagtgaatgctagag 28490870  T
Q  286 agagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||| || |||||||| ||||||||||||| ||||    
T  28490871 agagttttgaaaagtgactgttgctagcattcctct 28490906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 27592501 - 27592627
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||||    ||||||||||||||||||||||| || ||||||||| ||||| |||  ||| |||||||||||| ||||||||||  ||    
T  27592501 attggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtgctaaag 27592600  T
Q  286 agagtgttcaaaagtgagtgttgctag 312  Q
    ||||||| |||||| ||||||| ||||    
T  27592601 agagtgtgcaaaagcgagtgttactag 27592627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 34368491 - 34368361
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| |||||||||||| |||  |||| ||||||||||||||| |||| |||   ||  ||||||| |||||||||||| |||||    
T  34368491 attggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtgagtgttagag 34368392  T
Q  288 --agtgttcaaaagtgagtgttgctagcatt 316  Q
      ||||||||||| | |||||||||||||||    
T  34368391 aaagtgttcaaaaataagtgttgctagcatt 34368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 10253161 - 10253251
Alignment:
Q  218 tggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttg 308  Q
    ||||||||||||||||| ||||||||||||||| ||| |||| ||||||||| ||||||||||| |||||||| |||||||| || |||||    
T  10253161 tggaaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtgagtgttagagagtattcaaaagagaatgttg 10253251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 323
Target Start/End: Complemental strand, 39246739 - 39246602
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    |||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||||||| |||  |||  ||||||||| | ||||| || |||||    
T  39246739 attggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagtgattgttagag 39246640  T
Q  288 ag--tgttcaaaagtgagtgttgctagcattactctaa 323  Q
    ||  || |||||||||| ||||||||||||| ||||||    
T  39246639 aggatgctcaaaagtgattgttgctagcattcctctaa 39246602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 319
Target Start/End: Original strand, 41330442 - 41330575
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||||||||||||||||||| |||| ||||  |||||||||| |||||||| ||| |||| |||| ||||||||||||  ||||  |     
T  41330442 attggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtggatgctacaa 41330541  T
Q  286 agagtgttcaaaagtgagtgttgctagcattact 319  Q
    ||||||||||||| | | |||| ||| |||||||    
T  41330542 agagtgttcaaaaataaatgtttctaacattact 41330575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 42224662 - 42224770
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||  ||| || | ||||||||||||||||||  |||||||| ||||||| |||||||    
T  42224662 ctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaagagtgagtgctagagagagtgctcaaaagagagtgtt 42224761  T
Q  308 gctagcatt 316  Q
    |||||||||    
T  42224762 gctagcatt 42224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 28090271 - 28090406
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||||||||||   |||| |||||| |||| |||||||||||||||||||||||||| ||  ||| |||  |||| || ||| |||    
T  28090271 ctcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgatttcatataatataatagtaagt 28090370  T
Q  281 gctagagagtgttcaaaagtgagtgttgctagcatt 316  Q
    | ||||||||||| |||| | |||||||||| ||||    
T  28090371 gatagagagtgttgaaaaataagtgttgctaacatt 28090406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 43405524 - 43405431
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||| |||||||||||||| ||||||||||||||||||||||  | ||||||||||| ||||| |||  ||| ||| |||||||||||||||||    
T  43405524 attgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaagagtgagtg 43405431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 322
Target Start/End: Original strand, 28611820 - 28611963
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| |||| |||||||||||||| |||||||||||  |||| ||||||| |||||||| |||||||| ||    ||  ||||||| ||||||||| |    
T  28611820 ctcttttattgatttaaatcattgtgcgtctacactttaaaaatggaactcatacaaagtgatgggacatacactggttatatccaatgaaagagtgaat 28611919  T
Q  281 gct--agagagtgttcaaaagtgagtgttgctagcattactcta 322  Q
    | |  |||||||| |||||||||||||||| ||||||| |||||    
T  28611920 gttagagagagtgctcaaaagtgagtgttgttagcattcctcta 28611963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 25710521 - 25710614
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||||||||||| |||||| |||||||||||| |||||||||||| || ||||||| |||||| |||  ||| ||  |||||||||||||||||    
T  25710521 attggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaataaaagagtgagtg 25710614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 40971524 - 40971632
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgtt 307  Q
    |||||||||||||||  |||| ||| ||||||||||||||| |||  ||| ||  |||||||||||||||||||  |||||||| ||||||| |||||||    
T  40971524 ctacactttggaaatgaaacttacataaagtggtgggacatacattgatttcactcaataaaagagtgagtgctagagagagtgctcaaaagagagtgtt 40971623  T
Q  308 gctagcatt 316  Q
    | |||||||    
T  40971624 gttagcatt 40971632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 36337939 - 36338035
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgcta 284  Q
    ||||||||||||||||||| ||||||||||||||||| ||||  ||||||| |  |||||||| ||| |||| |||| ||||||| | |||||||||    
T  36337939 attggtttaaatcattgtgggtctacactttggaaattgaacatacacaaaattatgggacatacattaatttcatcaaataaaataatgagtgcta 36338035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 17700256 - 17700176
Alignment:
Q  232 acacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctag 312  Q
    |||||||||||||||  || |||   |||||||||||||||||||||| | || ||||| |||||||||||||||||||||    
T  17700256 acacaaagtggtggggtatacattggttccatccaataaaagagtgaggggtatagagtattcaaaagtgagtgttgctag 17700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 34384733 - 34384833
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| || ||| |||||||||||||||||| | |||| |||| ||||||||||||| | ||||||||| |||  ||| || ||||||||||| |||||    
T  34384733 ctcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggacatacattgatttcacccaataaaagaatgagt 34384832  T
Q  281 g 281  Q
    |    
T  34384833 g 34384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 316
Target Start/End: Original strand, 13456236 - 13456342
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgc 309  Q
    |||||||||| |||| |||| |||| ||| |||||||| || |||  ||| ||||| ||||||||||||||  ||||||||| |||||||  |||| |||    
T  13456236 ctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttcatccgataaaagagtgagtaatagagagtgctcaaaagaaagtgctgc 13456335  T
Q  310 tagcatt 316  Q
    |||||||    
T  13456336 tagcatt 13456342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 25919342 - 25919280
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacat 250  Q
    |||||||||||||||||||||||||||||||| |||| || | |||||||| ||||| |||||    
T  25919342 attggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacat 25919280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 17434891 - 17434948
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaa 238  Q
    |||||| |||||||||||||| |||| ||||||||||| ||||||||||||| |||||    
T  17434891 ctcttttattggtttaaatcaatgtgggtctacactttagaaatagaactcatacaaa 17434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 24915183 - 24915240
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||| ||| ||||    
T  24915183 ccaataaaagagtgagtgctagagagtgcttaaaagagagtgttgctagtattcctct 24915240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 24991014 - 24991071
Alignment:
Q  264 ccaataaaagagtgagtgctagagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||| ||| ||||    
T  24991014 ccaataaaagagtgagtgctagagagtgcttaaaagagagtgttgctagtattcctct 24991071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 321
Target Start/End: Complemental strand, 4714888 - 4714745
Alignment:
Q  180 tctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgag 279  Q
    ||||||| |||||| ||||||||||||  |||||| |||| ||||||||| |||||||| || |||||||  ||  ||||  ||||||||||| |||||     
T  4714888 tctcttttattggtataaatcattgtgtatctacattttgaaaatagaacccacacaaaatgatgggacacacaataatttaatccaataaaaaagtgaa 4714789  T
Q  280 tgct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    || |  | |||| ||||||||||||  |||| ||||||| ||||    
T  4714788 tgttaaaaagagggttcaaaagtgaaagttgttagcatttctct 4714745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 276
Target Start/End: Original strand, 41105619 - 41105707
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagt 276  Q
    |||||||||||||| |||| || | ||||||| |||| |||| |||||||||| ||||||||| | |  ||| ||||||||||||||||    
T  41105619 attggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagtgggacatcccttgatttcatccaataaaagagt 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 1923601 - 1923731
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||||||||||| |  |||||||||  |||| ||||||||||||||||||| ||||| |||   || |||| ||||||| ||  |||| |||      
T  1923601 attggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgtgacatacattctttgcatctaataaaaaagaaagtggtaggt 1923700  T
Q  286 agagtgttcaaaagtgagtgttgctagcatt 316  Q
    ||||| || |||||||| ||||||| |||||    
T  1923701 agagtattgaaaagtgaatgttgctggcatt 1923731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 17537151 - 17537269
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgct--ag 285  Q
    |||||||||||||||| ||  ||||||||||| ||||  |||  ||| ||| ||||||||||| |||  |||  ||| |||||||||||||||| |  ||    
T  17537151 attggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtgagtgatagag 17537250  T
Q  286 agagtgttcaaaagtgagt 304  Q
    |||||||| ||||||||||    
T  17537251 agagtgttgaaaagtgagt 17537269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 17568762 - 17568700
Alignment:
Q  256 aattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttgctagcatt 316  Q
    |||| ||||||||||||||||| |||||||  |||||| ||||||| ||||||||||||||||    
T  17568762 aatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcatt 17568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 26072231 - 26072285
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  26072231 ccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcatt 26072285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 37455479 - 37455359
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag-- 285  Q
    |||||||||| | ||||||||||||||||||| |||| |||| | |||||| |||||| |||| |||  |||  ||| |||||| ||||| |||||||      
T  37455479 attggtttaatt-attgtgagtctacactttgaaaattgaacccccacaaaatggtggaacatacattgattttatcgaataaatgagtgtgtgctagag 37455381  T
Q  286 agagtgttcaaaagtgagtgtt 307  Q
    |||||||| |||| ||||||||    
T  37455380 agagtgttaaaaaatgagtgtt 37455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 10950213 - 10950124
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    |||||||||||| |||||||| |||||| ||||||||  || ||||| ||||||||||| |||  ||| ||| |||| ||||||| ||||    
T  10950213 gtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattcaatgaaagagtaagtg 10950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 13456215 - 13456170
Alignment:
Q  266 aataaaagagtgagtgctagagagtgttcaaaagtgagtgttgcta 311  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  13456215 aataaaagagtgagtgctagagagtactcaaaagagagtgttgcta 13456170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 316
Target Start/End: Complemental strand, 8912618 - 8912511
Alignment:
Q  211 tacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag--agagtgttcaaaagtgagtgttg 308  Q
    ||||||||||||||  ||| |||| ||||||| |||||||  || ||||  | | ||||||||||||||||||||  | |||||| ||||| ||| ||||    
T  8912618 tacactttggaaatgaaacccacagaaagtggagggacatatattaattttaccaaataaaagagtgagtgctagaaaaagtgtttaaaagagagcgttg 8912519  T
Q  309 ctagcatt 316  Q
    ||||||||    
T  8912518 ctagcatt 8912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 42224643 - 42224584
Alignment:
Q  264 ccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||||||||||||  |||||||  ||||||| |||||||||||||||| ||||    
T  42224643 ccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgctagcattcctct 42224584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 285
Target Start/End: Original strand, 17568773 - 17568848
Alignment:
Q  210 ctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctag 285  Q
    ||||||||||||||||||||  ||  |||||||||||||||  ||  ||| ||  |||||||||||||||||||||    
T  17568773 ctacactttggaaatagaacctacctaaagtggtgggacataaattgatttcactcaataaaagagtgagtgctag 17568848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 25564006 - 25564088
Alignment:
Q  198 atcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtg 281  Q
    ||||||||| || ||||| || || ||||||| ||||||||||||||| |||| |||  ||| ||||||||||||| |||||||    
T  25564006 atcattgtgggt-tacacattagatatagaacccacacaaagtggtggaacatacatttatttcatccaataaaagggtgagtg 25564088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 32050435 - 32050489
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||||| ||||||||||||||||  || ||||||| ||||||||||||||||    
T  32050435 ccaataaaaaagtgagtgctagagagaatgctcaaaagagagtgttgctagcatt 32050489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 293
Target Start/End: Complemental strand, 7137980 - 7137950
Alignment:
Q  263 tccaataaaagagtgagtgctagagagtgtt 293  Q
    |||||||||||||||||||||||||||||||    
T  7137980 tccaataaaagagtgagtgctagagagtgtt 7137950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 28434867 - 28434966
Alignment:
Q  188 attggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagag 287  Q
    ||||||||||||||||||| ||||| |||||| |||| ||||  ||||  |||||||||||||  ||  |||  ||||||||||||| | |||| |||||    
T  28434867 attggtttaaatcattgtgggtctaaactttgaaaattgaaccaacac--agtggtgggacatatattgattttatccaataaaagaattagtgttagag 28434964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 316
Target Start/End: Complemental strand, 32309562 - 32309481
Alignment:
Q  237 aagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcatt 316  Q
    ||||||| |||||| ||| ||||  ||||||||| ||||||||||||||||||  |||| ||||| ||||||  ||||||||    
T  32309562 aagtggtcggacatacattaattttatccaataagagagtgagtgctagagagaatgttgaaaagagagtgtctctagcatt 32309481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 4959406 - 4959458
Alignment:
Q  264 ccaataaaagagtgagtgct--agagagtgttcaaaagtgagtgttgctagca 314  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||| ||||||    
T  4959406 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagca 4959458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Original strand, 10300051 - 10300088
Alignment:
Q  283 tagagagtgttcaaaagtgagtgttgctagcattactc 320  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  10300051 tagagagtgttgaaaagagagtgttgctagcattactc 10300088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 40971505 - 40971453
Alignment:
Q  264 ccaataaaagagtgagtgctaga--gagtgttcaaaagtgagtgttgctagca 314  Q
    ||||||||| |||||||| ||||  ||||||||||||| ||||||||||||||    
T  40971505 ccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagca 40971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 4427369 - 4427337
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaat 224  Q
    |||||||||||||||||||||||||||| ||||    
T  4427369 gtttaaatcattgtgagtctacactttgaaaat 4427337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 5413766 - 5413730
Alignment:
Q  283 tagagagtgttcaaaagtgagtgttgctagcattact 319  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  5413766 tagagagtgttcaaaagagagtgttgcttgcattact 5413730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 37455506 - 37455538
Alignment:
Q  289 gtgttcaaaagtgagtgttgctagcattactct 321  Q
    ||||||||||| |||||||||||||||||||||    
T  37455506 gtgttcaaaagagagtgttgctagcattactct 37455538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 9791 - 9694
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    |||||||| ||||||||||||||||||  |||| |||| |||||||| |||||||| || |||  ||| |||||||||||| |||||||| |||||||    
T  9791 gtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagag 9694  T

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Target: scaffold0492 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 11337 - 11240
Alignment:
Q  192 gtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagtgctagagag 289  Q
    |||||||| ||||||||||||||||||  |||| |||| |||||||| |||||||| || |||  ||| |||||||||||| |||||||| |||||||    
T  11337 gtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagagag 11240  T

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Target: scaffold0204 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 26904 - 27004
Alignment:
Q  181 ctctttgattggtttaaatcattgtgagtctacactttggaaatagaactcacacaaagtggtgggacatgcatgaattccatccaataaaagagtgagt 280  Q
    |||||| ||||||||||| |||| || |||||| ||||| |||| |||| ||||||||||||||| |||| |||  |||   |||||||| |||||||||    
T  26904 ctcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtgagt 27003  T
Q  281 g 281  Q
    |    
T  27004 g 27004  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 204761 - 204704
Alignment:
Q  264 ccaataaaagagtgagtgctagagag--tgttcaaaagtgagtgttgctagcattact 319  Q
    ||||||||||||||||| ||||||||  |||||||||  |||||||||||||||||||    
T  204761 ccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttgctagcattact 204704  T

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