View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7521_low_10 (Length: 232)

Name: NF7521_low_10
Description: NF7521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7521_low_10
NF7521_low_10
[»] chr7 (4 HSPs)
chr7 (194-229)||(37104973-37105008)
chr7 (198-229)||(31857511-31857542)
chr7 (196-232)||(19578999-19579036)
chr7 (197-232)||(44887555-44887591)
[»] chr4 (11 HSPs)
chr4 (197-232)||(48148982-48149017)
chr4 (196-229)||(13203101-13203134)
chr4 (197-229)||(52223390-52223422)
chr4 (196-228)||(52225194-52225226)
chr4 (201-232)||(15639251-15639282)
chr4 (194-228)||(11996500-11996534)
chr4 (194-231)||(32806975-32807013)
chr4 (197-232)||(3060596-3060632)
chr4 (197-232)||(44595982-44596018)
chr4 (194-229)||(46281465-46281501)
chr4 (194-229)||(53850102-53850138)
[»] chr8 (7 HSPs)
chr8 (195-229)||(15890286-15890320)
chr8 (196-232)||(34213631-34213668)
chr8 (196-231)||(8082759-8082795)
chr8 (196-231)||(10579028-10579064)
chr8 (194-229)||(13155669-13155705)
chr8 (196-228)||(32099384-32099416)
chr8 (197-232)||(32723949-32723985)
[»] scaffold0036 (1 HSPs)
scaffold0036 (197-229)||(32498-32530)
[»] chr3 (4 HSPs)
chr3 (197-229)||(36710813-36710845)
chr3 (195-224)||(48128473-48128502)
chr3 (196-231)||(35119306-35119342)
chr3 (194-229)||(40593862-40593898)
[»] chr2 (7 HSPs)
chr2 (49-116)||(10494320-10494387)
chr2 (195-232)||(16707234-16707272)
chr2 (199-229)||(18791432-18791462)
chr2 (196-229)||(128678-128711)
chr2 (197-232)||(2112397-2112433)
chr2 (197-229)||(24664276-24664308)
chr2 (194-229)||(45194522-45194558)
[»] chr1 (3 HSPs)
chr1 (197-232)||(28259982-28260017)
chr1 (195-231)||(51345669-51345706)
chr1 (197-232)||(5562887-5562923)
[»] scaffold0045 (1 HSPs)
scaffold0045 (195-232)||(22221-22259)
[»] chr6 (5 HSPs)
chr6 (194-231)||(16539506-16539544)
chr6 (195-231)||(9242374-9242411)
chr6 (196-232)||(12757485-12757522)
chr6 (196-232)||(14656347-14656384)
chr6 (197-232)||(32462118-32462154)
[»] chr5 (9 HSPs)
chr5 (195-232)||(34578581-34578619)
chr5 (195-232)||(37109582-37109620)
chr5 (196-229)||(11708418-11708451)
chr5 (196-229)||(33866534-33866567)
chr5 (197-229)||(1948560-1948592)
chr5 (196-231)||(7201120-7201156)
chr5 (197-232)||(7949157-7949193)
chr5 (197-232)||(29785611-29785647)
chr5 (194-229)||(36569860-36569896)
[»] scaffold0092 (1 HSPs)
scaffold0092 (197-229)||(53428-53460)
[»] scaffold0032 (1 HSPs)
scaffold0032 (194-229)||(37866-37902)


Alignment Details
Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 37104973 - 37105008
Alignment:
Q  194 attagggttaattaagtttttagtcctataaatatt 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  37104973 attagggttaattaagtttttagtcctataaatatt 37105008  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 229
Target Start/End: Original strand, 31857511 - 31857542
Alignment:
Q  198 gggttaattaagtttttagtcctataaatatt 229  Q
    ||||||||||||||||||||||||||||||||    
T  31857511 gggttaattaagtttttagtcctataaatatt 31857542  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 19578999 - 19579036
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatatttac 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  19578999 tagggttaattaagtttttagtccctataaatatttac 19579036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 44887591 - 44887555
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  44887591 agggttaattaagtttttagtccctataaatatttac 44887555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 48149017 - 48148982
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatttac 232  Q
    ||||||||||||||||||||||||||||||||||||    
T  48149017 agggttaattaagtttttagtcctataaatatttac 48148982  T

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Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 229
Target Start/End: Complemental strand, 13203134 - 13203101
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatatt 229  Q
    ||||||||||||||||||||||||||||||||||    
T  13203134 tagggttaattaagtttttagtcctataaatatt 13203101  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 52223390 - 52223422
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||||||||||||||||    
T  52223390 agggttaattaagtttttagtcctataaatatt 52223422  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 52225226 - 52225194
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatat 228  Q
    |||||||||||||||||||||||||||||||||    
T  52225226 tagggttaattaagtttttagtcctataaatat 52225194  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 15639282 - 15639251
Alignment:
Q  201 ttaattaagtttttagtcctataaatatttac 232  Q
    ||||||||||||||||||||||||||||||||    
T  15639282 ttaattaagtttttagtcctataaatatttac 15639251  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Original strand, 11996500 - 11996534
Alignment:
Q  194 attagggttaattaagtttttagtcctataaatat 228  Q
    ||||||||||||||||||||| |||||||||||||    
T  11996500 attagggttaattaagtttttggtcctataaatat 11996534  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 32806975 - 32807013
Alignment:
Q  194 attagggttaattaagtttttag-tcctataaatattta 231  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  32806975 attagggttaattaagtttttagttcctataaatattta 32807013  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 3060632 - 3060596
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3060632 agggttaattaagtttttagtccctataaatatttac 3060596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 44596018 - 44595982
Alignment:
Q  197 agggttaattaagtttttagtc-ctataaatatttac 232  Q
    |||||||||||||||||||||| ||||||||||||||    
T  44596018 agggttaattaagtttttagtcactataaatatttac 44595982  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 46281465 - 46281501
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatatt 229  Q
    |||||||||||||||||||||||| ||||||||||||    
T  46281465 attagggttaattaagtttttagtccctataaatatt 46281501  T

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Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 53850138 - 53850102
Alignment:
Q  194 attagggttaattaagtttttagtcc-tataaatatt 229  Q
    |||||||||||||||||||||||||| ||||||||||    
T  53850138 attagggttaattaagtttttagtccttataaatatt 53850102  T

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Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 15890320 - 15890286
Alignment:
Q  195 ttagggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||||||||||||||||||    
T  15890320 ttagggttaattaagtttttagtcctataaatatt 15890286  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 34213631 - 34213668
Alignment:
Q  196 tagggttaattaagtttttagtcc-tataaatatttac 232  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34213631 tagggttaattaagtttttagtccatataaatatttac 34213668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 8082795 - 8082759
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatattta 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  8082795 tagggttaattaagtttttagtccctataaatattta 8082759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 10579028 - 10579064
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatattta 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10579028 tagggttaattaagtttttagtccctataaatattta 10579064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 13155705 - 13155669
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatatt 229  Q
    |||||||||||||||||||||||| ||||||||||||    
T  13155705 attagggttaattaagtttttagtccctataaatatt 13155669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 32099416 - 32099384
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatat 228  Q
    ||||||||||||||||||| |||||||||||||    
T  32099416 tagggttaattaagtttttggtcctataaatat 32099384  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 32723985 - 32723949
Alignment:
Q  197 agggttaattaagtttttag-tcctataaatatttac 232  Q
    |||||||||||||||||||| ||||||||||||||||    
T  32723985 agggttaattaagtttttagttcctataaatatttac 32723949  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 32498 - 32530
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||||||||||||||||    
T  32498 agggttaattaagtttttagtcctataaatatt 32530  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 36710813 - 36710845
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||||||||||||||||    
T  36710813 agggttaattaagtttttagtcctataaatatt 36710845  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 48128473 - 48128502
Alignment:
Q  195 ttagggttaattaagtttttagtcctataa 224  Q
    ||||||||||||||||||||||||||||||    
T  48128473 ttagggttaattaagtttttagtcctataa 48128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 35119306 - 35119342
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatattta 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  35119306 tagggttaattaagtttttagtccctataaatattta 35119342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 40593898 - 40593862
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatatt 229  Q
    |||||||||||||||||||||||| ||||||||||||    
T  40593898 attagggttaattaagtttttagtccctataaatatt 40593862  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 10494387 - 10494320
Alignment:
Q  49 gttaagactgctttgagtgctgttgatggtgcaattcttgttctttctagtgttgtaggagtgaaaac 116  Q
    ||||||| |||| || ||||  |||| |||||| |||||||||||||||||||||  |||||||||||    
T  10494387 gttaagaatgctctgtgtgcctttgacggtgcagttcttgttctttctagtgttggtggagtgaaaac 10494320  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 16707272 - 16707234
Alignment:
Q  195 ttagggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16707272 ttagggttaattaagtttttagtccctataaatatttac 16707234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 18791462 - 18791432
Alignment:
Q  199 ggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||||||||||||||    
T  18791462 ggttaattaagtttttagtcctataaatatt 18791432  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 128678 - 128711
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatatt 229  Q
    |||| |||||||||||||||||||||||||||||    
T  128678 taggattaattaagtttttagtcctataaatatt 128711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 2112397 - 2112433
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  2112397 agggttaattaagtttttagtccctataaatatttac 2112433  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 24664276 - 24664308
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||| ||||||||||||||||||||    
T  24664276 agggttaattaaatttttagtcctataaatatt 24664308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 45194522 - 45194558
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatatt 229  Q
    |||||||||||||||||||||||| ||||||||||||    
T  45194522 attagggttaattaagtttttagtccctataaatatt 45194558  T

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Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 28260017 - 28259982
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatttac 232  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28260017 agggttaattaagtttttaatcctataaatatttac 28259982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 51345706 - 51345669
Alignment:
Q  195 ttagggttaattaagtttttagt-cctataaatattta 231  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  51345706 ttagggttaattaagtttttagtccctataaatattta 51345669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 5562923 - 5562887
Alignment:
Q  197 agggttaattaagtttttagtc-ctataaatatttac 232  Q
    |||||||||||||||||||||| ||||||||||||||    
T  5562923 agggttaattaagtttttagtctctataaatatttac 5562887  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 22259 - 22221
Alignment:
Q  195 ttagggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22259 ttagggttaattaagtttttagtccctataaatatttac 22221  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 16539544 - 16539506
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatattta 231  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16539544 attagggttaattaagtttttagtccctataaatattta 16539506  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 9242374 - 9242411
Alignment:
Q  195 ttagggttaattaagtttttagt-cctataaatattta 231  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9242374 ttagggttaattaagtttttagtccctataaatattta 9242411  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 12757522 - 12757485
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatatttac 232  Q
    |||||||||||||||||||||| |||||||||||||||    
T  12757522 tagggttaattaagtttttagtccctataaatatttac 12757485  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 14656347 - 14656384
Alignment:
Q  196 tagggttaattaagtttttagtcc-tataaatatttac 232  Q
    |||||||||||||||||||||||| |||||||||||||    
T  14656347 tagggttaattaagtttttagtccatataaatatttac 14656384  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 32462118 - 32462154
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  32462118 agggttaattaagtttttagtccctataaatatttac 32462154  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 34578619 - 34578581
Alignment:
Q  195 ttagggttaattaagtttttagtcc-tataaatatttac 232  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  34578619 ttagggttaattaagtttttagtccttataaatatttac 34578581  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 37109620 - 37109582
Alignment:
Q  195 ttagggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  37109620 ttagggttaattaagtttttagtccctataaatatttac 37109582  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 11708418 - 11708451
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||||||||| |||||||||||||    
T  11708418 tagggttaattaagtttttaatcctataaatatt 11708451  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 33866534 - 33866567
Alignment:
Q  196 tagggttaattaagtttttagtcctataaatatt 229  Q
    |||||||||||||| |||||||||||||||||||    
T  33866534 tagggttaattaagattttagtcctataaatatt 33866567  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 1948560 - 1948592
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    ||||||||||| |||||||||||||||||||||    
T  1948560 agggttaattatgtttttagtcctataaatatt 1948592  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 7201156 - 7201120
Alignment:
Q  196 tagggttaattaagtttttagt-cctataaatattta 231  Q
    |||||||||||||||||||||| ||||||||||||||    
T  7201156 tagggttaattaagtttttagtccctataaatattta 7201120  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 7949193 - 7949157
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7949193 agggttaattaagtttttagtccctataaatatttac 7949157  T

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Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 232
Target Start/End: Original strand, 29785611 - 29785647
Alignment:
Q  197 agggttaattaagtttttagt-cctataaatatttac 232  Q
    ||||||||||||||||||||| |||||||||||||||    
T  29785611 agggttaattaagtttttagtccctataaatatttac 29785647  T

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Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 36569896 - 36569860
Alignment:
Q  194 attagggttaattaagtttttagtcc-tataaatatt 229  Q
    |||||||||||||||||||||||||| ||||||||||    
T  36569896 attagggttaattaagtttttagtccttataaatatt 36569860  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 229
Target Start/End: Original strand, 53428 - 53460
Alignment:
Q  197 agggttaattaagtttttagtcctataaatatt 229  Q
    ||||||||||||||||||||| |||||||||||    
T  53428 agggttaattaagtttttagtactataaatatt 53460  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 37902 - 37866
Alignment:
Q  194 attagggttaattaagtttttagt-cctataaatatt 229  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37902 attagggttaattaagtttttagtccctataaatatt 37866  T

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