View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7521_low_5 (Length: 410)
Name: NF7521_low_5
Description: NF7521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7521_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 96 - 392
Target Start/End: Complemental strand, 1857812 - 1857516
Alignment:
| Q |
96 |
gcatatctccgtgaaactcacgtgatcaccggcgcttctttctttaaatccatcgacgatttctccgtcaccggaaccgctgcatatctcgccgaaaaac |
195 |
Q |
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| T |
1857812 |
gcatatctccgtgaaactcacgtgatcaccggcgcttctttctttaaatccatcgacgatttctccgtcaccggaaccgctgcatatctcgccgaaaaac |
1857713 |
T |
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| Q |
196 |
caccataaccgtaaaaattaccatcttctctggtagcgccgtcgtcgaaattcaaagcataactcgacgaatcataattcaacgtaccttgtttaacata |
295 |
Q |
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| T |
1857712 |
caccataaccgtaaaaattaccatcttctctggtagcgccgtcgtcgaaattcaaagcataactcgacggatcataattcaacgtaccttgtttaacata |
1857613 |
T |
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| Q |
296 |
actattccgattcttaccgaatcgacgaatgaacgttttccatttcggacctgcaacaatctctgacaattcacgtaccttcatccatccacgaaac |
392 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1857612 |
actattccgattcttaccgaatcgacgaatgaacgttttccatttcggacctgcaacaatctctgacaattcacgtaccttcatccatccacgaaac |
1857516 |
T |
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