View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7523_high_23 (Length: 335)
Name: NF7523_high_23
Description: NF7523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7523_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 48651922 - 48652180
Alignment:
| Q |
15 |
aaaaagttggatcaataaggcacaatccaagtaacaataactcattaaatatccttggaaagacataaaataacgattacaaaaagcaccaacataaata |
114 |
Q |
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| T |
48651922 |
aaaaagttggatcaataaggtacaatccaagtaacaataactcattaaatatccttggaaagacataaaataacgattacaaaaagcaccaacataaata |
48652021 |
T |
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| Q |
115 |
gggtaaatagggtgggcactggcacaaccataaaatgtaacattaaaggacgacaatacaacatgaccataacttaaaaggttaatgaaacaagtgaaat |
214 |
Q |
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| T |
48652022 |
gggtaa-tagggtgg-cactggcacaaccataaaatgtaacattaaaggacgacaatacaacatgaccataacttaaaaggttaatgaaacaagtgaaat |
48652119 |
T |
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| Q |
215 |
aatataacataaaacaccaattcagaatcgttgttttagaagttcacgagtcaagtggatt |
275 |
Q |
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| T |
48652120 |
aatataacataaaacaccaattcagaatcgttgttttagaagttcacgagtcaagtggatt |
48652180 |
T |
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