View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7523_high_37 (Length: 276)
Name: NF7523_high_37
Description: NF7523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7523_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 258
Target Start/End: Original strand, 37653368 - 37653616
Alignment:
| Q |
10 |
aagaatatccacaaacctaggtaaagatgttaaaggtaaccatctatattgctaggaaacttcgactacttcacccatacataataaataaatcattgga |
109 |
Q |
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| T |
37653368 |
aagaaaatccacaaacctaggtaaagatgttaaaggtaaccatctatattgctaggaaacttcgactacttcacccatacataataaataaatcattgga |
37653467 |
T |
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| Q |
110 |
tatatgtggcgataataacaatttgaagaatgactttgatccagtggcagagggaagaactacatgtccatcatcatgattctaaattcatagaaatcaa |
209 |
Q |
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| T |
37653468 |
tatatgtggcgataataacaatttgaagaatgacttcgatccagtggcagagggaagaactacatgtccatcatcatgattctaaattcatcgaaatcaa |
37653567 |
T |
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| Q |
210 |
ttctgccatcaccatcggtgtcaacgcagccgatcattcttccacattt |
258 |
Q |
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| T |
37653568 |
ttctgccatcaccatcggtgtcaacgcagcctatcattcttccacattt |
37653616 |
T |
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