View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7523_low_44 (Length: 260)

Name: NF7523_low_44
Description: NF7523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7523_low_44
NF7523_low_44
[»] chr7 (53 HSPs)
chr7 (76-243)||(33601997-33602166)
chr7 (123-243)||(33601380-33601500)
chr7 (123-233)||(17944323-17944434)
chr7 (123-237)||(39967899-39968014)
chr7 (123-236)||(48470023-48470137)
chr7 (123-235)||(30570909-30571022)
chr7 (153-236)||(11619135-11619218)
chr7 (123-236)||(19302540-19302650)
chr7 (124-236)||(27863702-27863815)
chr7 (153-236)||(21568472-21568555)
chr7 (157-236)||(38499890-38499969)
chr7 (126-236)||(420342-420453)
chr7 (123-201)||(46280284-46280363)
chr7 (123-236)||(19022562-19022676)
chr7 (126-235)||(34744010-34744120)
chr7 (153-227)||(39629943-39630017)
chr7 (122-236)||(45593505-45593621)
chr7 (123-217)||(48507701-48507797)
chr7 (153-236)||(28614443-28614526)
chr7 (123-218)||(45338428-45338523)
chr7 (157-235)||(5947198-5947276)
chr7 (123-236)||(20526425-20526539)
chr7 (144-236)||(19214383-19214476)
chr7 (163-224)||(20428494-20428555)
chr7 (127-217)||(38138475-38138566)
chr7 (141-218)||(28341052-28341129)
chr7 (157-235)||(34035931-34036009)
chr7 (123-236)||(39279941-39280055)
chr7 (123-236)||(22283725-22283835)
chr7 (122-236)||(3308228-3308344)
chr7 (157-241)||(30535577-30535660)
chr7 (192-232)||(34464202-34464242)
chr7 (157-236)||(36517593-36517670)
chr7 (123-206)||(39907782-39907866)
chr7 (156-232)||(43250681-43250756)
chr7 (123-236)||(17248534-17248645)
chr7 (126-236)||(19718989-19719098)
chr7 (173-236)||(27566671-27566734)
chr7 (185-236)||(35056717-35056768)
chr7 (153-236)||(45790403-45790485)
chr7 (171-217)||(3928006-3928052)
chr7 (125-182)||(4970824-4970882)
chr7 (185-235)||(5947283-5947333)
chr7 (123-236)||(33678759-33678873)
chr7 (185-235)||(43219623-43219672)
chr7 (171-236)||(20526906-20526971)
chr7 (123-227)||(40377838-40377943)
chr7 (123-182)||(7467588-7467648)
chr7 (135-215)||(18865050-18865130)
chr7 (122-165)||(20234461-20234505)
chr7 (199-235)||(27288003-27288039)
chr7 (185-233)||(43219785-43219832)
chr7 (123-182)||(43694601-43694661)
[»] chr3 (50 HSPs)
chr3 (122-236)||(53789438-53789553)
chr3 (123-236)||(20880455-20880569)
chr3 (123-231)||(30443872-30443981)
chr3 (123-236)||(39980708-39980822)
chr3 (131-235)||(18405809-18405914)
chr3 (123-236)||(21367646-21367760)
chr3 (123-234)||(36631030-36631142)
chr3 (123-236)||(402519-402633)
chr3 (123-236)||(20170502-20170616)
chr3 (123-236)||(46778168-46778281)
chr3 (153-233)||(901934-902014)
chr3 (123-241)||(584025-584144)
chr3 (153-236)||(24085315-24085398)
chr3 (143-236)||(22203429-22203523)
chr3 (123-215)||(35959454-35959547)
chr3 (125-236)||(37689212-37689322)
chr3 (141-221)||(46478684-46478767)
chr3 (123-236)||(20257514-20257629)
chr3 (157-236)||(46031004-46031083)
chr3 (185-236)||(49556900-49556951)
chr3 (190-236)||(31365165-31365211)
chr3 (157-235)||(45541585-45541662)
chr3 (122-203)||(47132309-47132391)
chr3 (123-226)||(4401026-4401127)
chr3 (156-227)||(28795839-28795910)
chr3 (157-236)||(34610783-34610862)
chr3 (123-205)||(44061032-44061114)
chr3 (171-236)||(9832732-9832797)
chr3 (157-206)||(33883757-33883806)
chr3 (157-225)||(466207-466275)
chr3 (185-229)||(26911627-26911671)
chr3 (174-233)||(5391910-5391968)
chr3 (193-236)||(10277322-10277365)
chr3 (123-225)||(13715560-13715665)
chr3 (157-236)||(30573892-30573970)
chr3 (157-227)||(3845549-3845618)
chr3 (123-180)||(30956659-30956717)
chr3 (123-180)||(30972471-30972529)
chr3 (157-231)||(39602193-39602266)
chr3 (185-235)||(39723219-39723268)
chr3 (123-228)||(46886677-46886783)
chr3 (172-233)||(944591-944652)
chr3 (175-236)||(25453836-25453897)
chr3 (170-231)||(43062718-43062779)
chr3 (129-236)||(1816568-1816675)
chr3 (158-202)||(26990502-26990546)
chr3 (123-206)||(28622006-28622090)
chr3 (200-236)||(31365286-31365322)
chr3 (156-236)||(37389196-37389276)
chr3 (185-233)||(39723381-39723428)
[»] chr4 (46 HSPs)
chr4 (123-236)||(17822842-17822956)
chr4 (123-236)||(50681066-50681180)
chr4 (128-236)||(21731633-21731742)
chr4 (159-235)||(13126554-13126630)
chr4 (152-236)||(29657393-29657477)
chr4 (153-241)||(30668339-30668426)
chr4 (131-236)||(22030190-22030296)
chr4 (131-227)||(55414406-55414503)
chr4 (134-236)||(50662715-50662818)
chr4 (153-236)||(54426053-54426136)
chr4 (125-230)||(7839344-7839450)
chr4 (156-236)||(25904200-25904280)
chr4 (128-225)||(2244032-2244133)
chr4 (123-233)||(53294094-53294205)
chr4 (153-237)||(26841-26924)
chr4 (157-233)||(55302263-55302339)
chr4 (153-236)||(39603147-39603230)
chr4 (126-236)||(41512633-41512744)
chr4 (127-236)||(35571608-35571718)
chr4 (185-235)||(41336802-41336852)
chr4 (159-236)||(24169279-24169356)
chr4 (123-236)||(37863932-37864043)
chr4 (163-236)||(55064855-55064928)
chr4 (125-236)||(2996554-2996665)
chr4 (169-236)||(20109611-20109678)
chr4 (123-236)||(25332753-25332868)
chr4 (131-235)||(46588051-46588157)
chr4 (157-226)||(1407970-1408040)
chr4 (123-236)||(20108988-20109102)
chr4 (185-235)||(49939929-49939979)
chr4 (170-235)||(21523585-21523649)
chr4 (123-227)||(54069403-54069508)
chr4 (185-233)||(43886112-43886159)
chr4 (185-233)||(56249566-56249613)
chr4 (184-227)||(3069960-3070003)
chr4 (129-203)||(16199991-16200066)
chr4 (157-204)||(28614817-28614864)
chr4 (123-208)||(15177207-15177293)
chr4 (123-236)||(29388593-29388707)
chr4 (153-235)||(46592187-46592269)
chr4 (132-236)||(29912936-29913040)
chr4 (176-229)||(49003859-49003912)
chr4 (157-241)||(1203088-1203172)
chr4 (190-230)||(15173286-15173326)
chr4 (157-224)||(20031763-20031831)
chr4 (137-224)||(40831019-40831106)
[»] chr2 (70 HSPs)
chr2 (123-236)||(41851514-41851628)
chr2 (123-236)||(45229491-45229604)
chr2 (125-236)||(43279506-43279616)
chr2 (123-236)||(41812069-41812181)
chr2 (123-236)||(15757635-15757750)
chr2 (161-233)||(33981140-33981212)
chr2 (123-236)||(32592566-32592679)
chr2 (123-236)||(39659486-39659600)
chr2 (123-235)||(41241111-41241223)
chr2 (123-225)||(12464461-12464564)
chr2 (123-233)||(18066107-18066218)
chr2 (141-235)||(26202025-26202120)
chr2 (157-236)||(41293140-41293219)
chr2 (123-236)||(1625879-1625993)
chr2 (126-235)||(5745763-5745873)
chr2 (131-236)||(20952342-20952448)
chr2 (156-236)||(20926516-20926595)
chr2 (152-235)||(750679-750762)
chr2 (169-236)||(13325596-13325663)
chr2 (153-235)||(7035545-7035627)
chr2 (158-236)||(16451133-16451211)
chr2 (123-236)||(26626852-26626966)
chr2 (137-225)||(9174808-9174897)
chr2 (150-235)||(33192209-33192293)
chr2 (123-231)||(40279176-40279285)
chr2 (175-236)||(43570446-43570506)
chr2 (156-235)||(1647249-1647327)
chr2 (157-236)||(4606939-4607018)
chr2 (161-235)||(7928276-7928351)
chr2 (158-241)||(23974465-23974547)
chr2 (123-220)||(33319807-33319903)
chr2 (123-235)||(41407280-41407394)
chr2 (171-236)||(2227194-2227259)
chr2 (122-225)||(12289774-12289879)
chr2 (192-236)||(38916286-38916330)
chr2 (123-218)||(39073684-39073780)
chr2 (173-232)||(449877-449936)
chr2 (124-230)||(680483-680589)
chr2 (185-236)||(787374-787424)
chr2 (157-236)||(8017448-8017526)
chr2 (185-236)||(28677637-28677687)
chr2 (185-236)||(33503049-33503099)
chr2 (157-236)||(35378994-35379072)
chr2 (154-229)||(36125372-36125447)
chr2 (145-231)||(40279268-40279355)
chr2 (145-231)||(40279338-40279425)
chr2 (159-225)||(3611242-3611308)
chr2 (131-224)||(10258666-10258760)
chr2 (154-236)||(10619197-10619279)
chr2 (156-225)||(12194965-12195035)
chr2 (163-233)||(31561722-31561792)
chr2 (163-233)||(36043924-36043994)
chr2 (123-236)||(36114398-36114512)
chr2 (190-236)||(42420200-42420246)
chr2 (123-235)||(2416292-2416405)
chr2 (186-235)||(5902528-5902576)
chr2 (125-236)||(11201358-11201471)
chr2 (126-207)||(12795774-12795855)
chr2 (170-235)||(15305701-15305766)
chr2 (199-236)||(20933787-20933824)
chr2 (123-207)||(23956038-23956120)
chr2 (160-225)||(29316764-29316828)
chr2 (157-230)||(42457962-42458035)
chr2 (156-233)||(43717117-43717193)
chr2 (196-236)||(1801721-1801760)
chr2 (123-203)||(1810644-1810724)
chr2 (185-237)||(19608609-19608661)
chr2 (192-236)||(24100977-24101021)
chr2 (170-234)||(40158745-40158808)
chr2 (168-236)||(43529836-43529903)
[»] chr5 (43 HSPs)
chr5 (123-235)||(16937861-16937974)
chr5 (123-236)||(16457956-16458070)
chr5 (122-236)||(10639931-10640046)
chr5 (153-236)||(12857682-12857765)
chr5 (123-236)||(29925820-29925934)
chr5 (123-236)||(39105443-39105557)
chr5 (124-231)||(40426745-40426853)
chr5 (153-236)||(12857315-12857398)
chr5 (169-235)||(3735136-3735202)
chr5 (142-236)||(1464997-1465091)
chr5 (126-233)||(32009674-32009783)
chr5 (153-230)||(37954696-37954773)
chr5 (157-236)||(7705975-7706054)
chr5 (123-235)||(2568636-2568749)
chr5 (170-236)||(35446082-35446148)
chr5 (131-236)||(43300865-43300971)
chr5 (127-235)||(25461074-25461183)
chr5 (170-234)||(34669708-34669773)
chr5 (156-236)||(42500219-42500298)
chr5 (157-236)||(7984983-7985062)
chr5 (157-211)||(4014426-4014480)
chr5 (158-236)||(29845413-29845489)
chr5 (153-227)||(39477893-39477967)
chr5 (161-235)||(42646685-42646759)
chr5 (200-236)||(2973521-2973557)
chr5 (157-232)||(3280696-3280771)
chr5 (157-233)||(9202728-9202804)
chr5 (144-208)||(13697764-13697828)
chr5 (170-225)||(3932664-3932719)
chr5 (153-236)||(9107100-9107183)
chr5 (185-235)||(706505-706555)
chr5 (126-235)||(6587086-6587195)
chr5 (173-235)||(8334601-8334663)
chr5 (143-236)||(17368675-17368768)
chr5 (175-236)||(17258861-17258921)
chr5 (192-233)||(31038333-31038374)
chr5 (192-233)||(31047557-31047598)
chr5 (170-235)||(32859698-32859762)
chr5 (170-235)||(32861870-32861934)
chr5 (163-220)||(34160751-34160808)
chr5 (196-236)||(3520630-3520670)
chr5 (185-236)||(6521119-6521171)
chr5 (131-206)||(7907868-7907944)
[»] chr8 (45 HSPs)
chr8 (123-236)||(26771244-26771358)
chr8 (123-235)||(10758235-10758347)
chr8 (123-236)||(27028810-27028924)
chr8 (122-236)||(38648329-38648444)
chr8 (123-236)||(18133635-18133749)
chr8 (122-236)||(25930530-25930646)
chr8 (153-235)||(12976223-12976304)
chr8 (176-236)||(8146362-8146422)
chr8 (157-236)||(31716204-31716283)
chr8 (123-236)||(35534590-35534702)
chr8 (170-236)||(10120783-10120849)
chr8 (123-236)||(29205787-29205900)
chr8 (128-236)||(30251431-30251540)
chr8 (157-236)||(35749547-35749626)
chr8 (123-236)||(16825515-16825628)
chr8 (155-241)||(43045697-43045783)
chr8 (123-236)||(37945576-37945689)
chr8 (125-236)||(6881908-6882020)
chr8 (192-236)||(28763417-28763461)
chr8 (125-236)||(29168034-29168146)
chr8 (157-236)||(1930049-1930128)
chr8 (126-236)||(10114471-10114582)
chr8 (153-231)||(16347200-16347279)
chr8 (170-233)||(35643968-35644031)
chr8 (157-243)||(2458537-2458622)
chr8 (170-236)||(42893467-42893533)
chr8 (163-236)||(1058054-1058126)
chr8 (144-236)||(9956791-9956884)
chr8 (185-234)||(10383927-10383975)
chr8 (175-236)||(13459677-13459737)
chr8 (141-236)||(13958061-13958156)
chr8 (185-236)||(32840963-32841014)
chr8 (153-236)||(33808313-33808396)
chr8 (123-181)||(42043377-42043436)
chr8 (153-236)||(43504761-43504843)
chr8 (185-235)||(3254267-3254316)
chr8 (131-208)||(11861791-11861869)
chr8 (142-235)||(12782163-12782257)
chr8 (153-219)||(20672760-20672825)
chr8 (123-220)||(37353243-37353340)
chr8 (175-224)||(31751546-31751595)
chr8 (199-232)||(40859763-40859796)
chr8 (156-224)||(3536934-3537002)
chr8 (157-229)||(30389113-30389184)
chr8 (157-205)||(43717945-43717993)
[»] chr1 (62 HSPs)
chr1 (131-236)||(49938734-49938840)
chr1 (156-236)||(15477578-15477658)
chr1 (123-236)||(3233992-3234106)
chr1 (123-236)||(17603361-17603475)
chr1 (123-230)||(24915034-24915142)
chr1 (123-233)||(14576634-14576744)
chr1 (123-233)||(30286499-30286611)
chr1 (124-233)||(37631539-37631649)
chr1 (123-243)||(13809977-13810098)
chr1 (123-233)||(27976574-27976694)
chr1 (153-236)||(2295106-2295189)
chr1 (123-236)||(473143-473256)
chr1 (158-236)||(37473418-37473496)
chr1 (124-221)||(51688685-51688782)
chr1 (122-236)||(27970271-27970387)
chr1 (125-228)||(51929524-51929628)
chr1 (123-236)||(6556950-6557065)
chr1 (153-236)||(29904761-29904844)
chr1 (160-237)||(38503441-38503518)
chr1 (123-235)||(41184628-41184741)
chr1 (153-236)||(5720935-5721018)
chr1 (153-236)||(5741616-5741699)
chr1 (131-236)||(40977380-40977487)
chr1 (130-221)||(42174841-42174933)
chr1 (157-235)||(7136977-7137054)
chr1 (123-220)||(41195187-41195284)
chr1 (156-241)||(27820169-27820253)
chr1 (124-220)||(27820330-27820427)
chr1 (123-208)||(47432075-47432160)
chr1 (157-236)||(10199386-10199464)
chr1 (157-236)||(10744315-10744393)
chr1 (157-236)||(45975704-45975783)
chr1 (153-235)||(3887610-3887692)
chr1 (158-236)||(10280664-10280741)
chr1 (177-235)||(36872299-36872357)
chr1 (142-235)||(37842334-37842427)
chr1 (157-235)||(51695473-51695551)
chr1 (156-236)||(33186318-33186399)
chr1 (132-236)||(34290224-34290328)
chr1 (190-235)||(37517144-37517189)
chr1 (141-236)||(43230749-43230843)
chr1 (131-234)||(14331970-14332072)
chr1 (175-235)||(36872458-36872518)
chr1 (128-241)||(36872716-36872826)
chr1 (126-208)||(1510315-1510398)
chr1 (126-236)||(2777874-2777984)
chr1 (127-236)||(12287169-12287279)
chr1 (125-179)||(39596578-39596633)
chr1 (190-233)||(44217151-44217194)
chr1 (126-200)||(49888749-49888824)
chr1 (157-235)||(7941620-7941698)
chr1 (142-231)||(25479579-25479668)
chr1 (186-236)||(38001639-38001688)
chr1 (127-235)||(1509734-1509843)
chr1 (156-241)||(28689425-28689509)
chr1 (185-234)||(35925732-35925780)
chr1 (190-230)||(341494-341534)
chr1 (150-218)||(15784336-15784404)
chr1 (171-235)||(27145714-27145777)
chr1 (123-203)||(30581781-30581861)
chr1 (204-236)||(41505745-41505777)
chr1 (190-230)||(42575452-42575492)
[»] chr6 (29 HSPs)
chr6 (125-227)||(34430447-34430550)
chr6 (157-227)||(9763574-9763644)
chr6 (126-236)||(20368158-20368268)
chr6 (123-236)||(9093533-9093647)
chr6 (155-236)||(35070627-35070708)
chr6 (123-233)||(2735048-2735159)
chr6 (126-208)||(6536597-6536680)
chr6 (126-236)||(35099019-35099129)
chr6 (170-236)||(9912168-9912234)
chr6 (161-235)||(31624108-31624181)
chr6 (123-235)||(18076175-18076295)
chr6 (176-235)||(848022-848081)
chr6 (123-193)||(6909892-6909963)
chr6 (157-236)||(31813175-31813254)
chr6 (123-233)||(24626274-24626377)
chr6 (156-236)||(30641758-30641838)
chr6 (185-236)||(19411526-19411577)
chr6 (135-241)||(24982696-24982803)
chr6 (185-235)||(696644-696693)
chr6 (143-236)||(13907584-13907678)
chr6 (123-195)||(837234-837307)
chr6 (185-230)||(2027390-2027434)
chr6 (156-228)||(12628355-12628425)
chr6 (173-233)||(18611102-18611163)
chr6 (202-235)||(30926578-30926611)
chr6 (153-197)||(160968-161012)
chr6 (123-206)||(415283-415367)
chr6 (185-233)||(696484-696531)
chr6 (192-236)||(31623599-31623643)
[»] scaffold0050 (1 HSPs)
scaffold0050 (157-230)||(58756-58829)
[»] scaffold0221 (1 HSPs)
scaffold0221 (157-233)||(22245-22321)
[»] scaffold0528 (1 HSPs)
scaffold0528 (192-233)||(962-1003)


Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 33602166 - 33601997
Alignment:
Q  76 gatctggaaaatcaacgtaacag--caatttcgttatagnnnnnnngtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 173  Q
    |||||||||||||||||||||||  ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602166 gatctggaaaatcaacgtaacagagcaatttcgttatagtttttttgtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 33602067  T
Q  174 acttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaaga 243  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  33602066 acttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaaga 33601997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 33601500 - 33601380
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33601500 ttaaattatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 33601401  T
Q  223 tttcataagttctcgaaaaga 243  Q
    |||||||||||||||||||||    
T  33601400 tttcataagttctcgaaaaga 33601380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 17944434 - 17944323
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| || | ||||| ||||| ||||| |||||| || || ||||||| |||||||||||||||| |||||||||||||||||||||    
T  17944434 ttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctg 17944335  T
Q  222 ttttcataagtt 233  Q
    |||| |||||||    
T  17944334 tttttataagtt 17944323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 39967899 - 39968014
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||| | ||||||||| ||||| ||||||||||| |||||||| |||||  |||| |||||| |||||||||| | || |||||||||    
T  39967899 ttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctg 39967998  T
Q  222 ttttcataagttctcg 237  Q
    ||||||||||||||||    
T  39967999 ttttcataagttctcg 39968014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 48470023 - 48470137
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  ||||||| ||||| ||||||||| ||  | ||||||||||  |||||| ||||||||||||||||| || |||||||||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  48470123 ttttcataagttctc 48470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 30571022 - 30570909
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||| ||||||||| ||||||||| |  |||||||| |||  || ||||||||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  30571022 ttaaattatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcataagctg 30570923  T
Q  222 ttttcataagttct 235  Q
    |||||| |||||||    
T  30570922 ttttcacaagttct 30570909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 11619218 - 11619135
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||  || ||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||    
T  11619218 ttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctc 11619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 19302650 - 19302540
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| || ||||||| ||||| |||||||||     ||||||||||||  |||| ||||||||| ||||||||| ||||||||||||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  222 ttttcataagttctc 236  Q
    ||||||||| |||||    
T  19302554 ttttcataaattctc 19302540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 27863815 - 27863702
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    |||||| | ||||||| |||||||||| |||||| ||| |||| ||||||||||||||||  |||||||||||||| || |||||| | ||  |||||||    
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  223 tttcataagttctc 236  Q
    ||||||||||||||    
T  27863715 tttcataagttctc 27863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 21568555 - 21568472
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| || ||||||||||| |  |||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  21568555 ttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctc 21568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 38499969 - 38499890
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| ||||| |||||||||||||  ||||||| |||||||||||||||| |||||||||||||||| | ||||||||    
T  38499969 ataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctc 38499890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 420342 - 420453
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| |||||||||| ||||   |||||||| || |||||||||||||  |||| ||||||| ||||  ||||| ||||||||  |||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttt 420441  T
Q  225 tcataagttctc 236  Q
    ||||||||||||    
T  420442 tcataagttctc 420453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 46280363 - 46280284
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagctt 201  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| || |||||||||||||  || ||||||||||||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 19022676 - 19022562
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||  ||  |||||||||| ||||| ||||||||| || |||||||||||||  |||| |||| | | |||||||||| ||||||||| ||    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttg 19022577  T
Q  222 ttttcataagttctc 236  Q
    ||||||||| |||||    
T  19022576 ttttcataaattctc 19022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 34744010 - 34744120
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| || ||||||| ||||| ||||||||| || |||||||||| ||  ||||  ||||||||||| |||||| ||||||||| | |||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttt 34744109  T
Q  225 tcataagttct 235  Q
    |||| ||||||    
T  34744110 tcattagttct 34744120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 39630017 - 39629943
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    |||| |||||||| ||  ||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||    
T  39630017 ttttttaagctatattgaagaacttatgactataagttgaaaaaagcttatgaaaattgtcataagctgttttca 39629943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 45593505 - 45593621
Alignment:
Q  122 attaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctg-aaaaaagcttatgaaaagtgtcataagc 219  Q
    |||||||  ||||||||| ||||||||| |  |||| ||||||||||| ||||||||| |||  ||| ||| ||||||||||||||||| |||||| ||     
T  45593505 attaaatattttttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcaga 45593604  T
Q  220 tgttttcataagttctc 236  Q
    |||||| ||||||||||    
T  45593605 tgtttttataagttctc 45593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 48507701 - 48507797
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatc-ttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 217  Q
    ||||||||||||||||| ||||||||   ||||| |||||| ||| |||||||||||||||| |||||||||||||  ||||| |||| ||||||||    
T  48507701 ttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaaaaatacttataaaaaatgtcataa 48507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 28614443 - 28614526
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||| ||||| | || ||||||||||||| |||| ||||||||||||| |||||| ||| ||| | |||||||||||||||||    
T  28614443 ttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagttctc 28614526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 218
Target Start/End: Original strand, 45338428 - 45338523
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 218  Q
    ||||||||||||||||| |||| ||||| ||||| |||||||| || ||||||| |||||  |||| |||||||| || || |||| |||||||||    
T  45338428 ttaaattgtttttgtatatgctgtaagttgttttttaagctatattggagaactgatgaaaataagttgaaaaaaactaataaaaattgtcataag 45338523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 5947198 - 5947276
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||  ||||| |||||||  ||||||||||| |||||||||||| || ||||||||| ||||| |||||||    
T  5947198 ataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaaagttct 5947276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 20526425 - 20526539
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||| | ||||||  |||||||||  ||||| ||||||||| || ||||||| |||||  |||||| |||| |||||| ||||| ||| |||| |||    
T  20526425 ttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactg 20526524  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  20526525 ttttcataagttctc 20526539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 19214476 - 19214383
Alignment:
Q  144 tataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||| |||| |||||||||| ||  ||||||||||||  |||| ||||| ||| ||||||||| ||||||  |||||||||||||||||||    
T  19214476 tataagttgtttgtataagctatattgtagaacttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctc 19214383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 20428494 - 20428555
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||| ||||||| |||  ||||||||||||||||||||| || |||||||||||||||    
T  20428494 tatcttagggaacttacgaaaataagctgaaaaaagcttatgagaactgtcataagctgttt 20428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 38138566 - 38138475
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 217  Q
    |||| |||||||| |||||||||| ||||| || |||||| ||   |||||||||||  |||| ||||||||||||||||||| ||||||||    
T  38138566 attgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 38138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 28341129 - 28341052
Alignment:
Q  141 tgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 218  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||  ||||||| ||||||||| |||||| |||||||||    
T  28341129 tgctataagttgtttgtataaactatattagagaacttatgaa-ataagctggaaaaagcttttgaaaattgtcataag 28341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 34035931 - 34036009
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||||||||||||  |||  |||| |||||| | |||||||| | ||||||||| | ||||||||||||||    
T  34035931 ataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttct 34036009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 39279941 - 39280055
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| || |||| | || ||| ||||  |||||| |||||||| ||||  |||||||||||||||||||| ||| ||  ||||||||    
T  39279941 ttaaattgtttgtgtatatgttataggctgatttcataaattatcttggagaacttttgaaaataagctgaaaaaagcttatgtaaaatgctataagctg 39280040  T
Q  222 ttttcataagttctc 236  Q
    |||| ||||| ||||    
T  39280041 tttttataagctctc 39280055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 22283835 - 22283725
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||||  |||||||   ||||| |||| | ||||||||||||||||| |  ||||||||||| |||||||    | | ||||||||||    
T  22283835 ttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagcttat----attatcataagctg 22283740  T
Q  222 ttttcataagttctc 236  Q
    |||||||| ||||||    
T  22283739 ttttcatatgttctc 22283725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 3308344 - 3308228
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatga-aaagtgtcataagc 219  Q
    |||||||||||| | ||| |||||||||   |||| | ||| ||| || |||||||||| ||  ||||||||||||||||||||| ||| || |||||||    
T  3308344 attaaattgtttatttatatgctataagatattttcagaagttatgtttgagaacttattaaaataagctgaaaaaagcttatgagaaaatggcataagc 3308245  T
Q  220 tgttttcataagttctc 236  Q
    | |||||| ||||||||    
T  3308244 tattttcaaaagttctc 3308228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 30535577 - 30535660
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    ||||||||||||| ||||| ||||||  ||| ||||||| |||||| ||| | | ||||||| ||||||||||||||||| ||||    
T  30535577 ataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaaca-tatcataagttgttttcataagttctccaaaa 30535660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 34464242 - 34464202
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  34464242 aaaaaagcttgtgaaaattgtcataagctgttttcataagt 34464202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 36517593 - 36517670
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| ||||| |||||||  ||| ||||||| |||||||||| | ||||  |||||||||| ||||||||||    
T  36517593 ataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtc--aagctgttttaataagttctc 36517670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 39907782 - 39907866
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 206  Q
    |||||||||||||||||  |||||||   ||||| |||| ||||||||||||||| |||||  ||||||||||| |||| |||||    
T  39907782 ttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagctaatgaa 39907866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 43250756 - 43250681
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||| || |||| ||||||||| ||| ||||||| | |||| ||| | |||||||||||||||||||||||    
T  43250756 tataagctattttggagagcttatgaatataaactgaaaacaacttacgaaca-tgtcataagctgttttcataagt 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 17248534 - 17248645
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||||  ||||||||   |||| |||||  |||||||||||||||||||  |||| | |||  |||||||||| | ||| ||||||||    
T  17248534 ttaaattgtttttgtataagctataagctcttttcataag--atcttagagaacttatgaaaataaggt-aaatcagcttatgaacaatgttataagctg 17248630  T
Q  222 ttttcataagttctc 236  Q
    |||| ||||||||||    
T  17248631 tttttataagttctc 17248645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 19718989 - 19719098
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||  || ||||||| ||||| |||| ||||||| ||  |||||| ||  ||||||||||| || ||||||| | ||||||||| |||||    
T  19718989 aattgtttttgtaaatgttataagttgttttcataa-ctatcttggatcacttataaagataagctgaaaacagtttatgaaca-tgtcataagttgttt 19719086  T
Q  225 tcataagttctc 236  Q
    ||||||||||||    
T  19719087 tcataagttctc 19719098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 27566734 - 27566671
Alignment:
Q  173 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||  |||| |||||||||||| |||||  ||||||||||| |||||||||| ||||    
T  27566734 aacttatgaaaataagttgaaaaaagcttgtgaaagttgtcataagctattttcataagctctc 27566671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 35056717 - 35056768
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| ||||||||||||||  |||||||||||| ||||||| ||||||||||    
T  35056717 taagttgaaaaaagcttattgaaagtgtcataatctgtttttataagttctc 35056768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 45790485 - 45790403
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| |||| || || ||||||||||  |||||||||||| |||| | |||| ||||||||| | |||||||||||||||    
T  45790485 ttttataaactatattggataacttatgaaaataagctgaaaaa-gcttttaaaaattgtcataagttattttcataagttctc 45790403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 3928052 - 3928006
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataa 217  Q
    ||||||||||||  |||| ||||||||||||||||||| ||||||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 3928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 4970882 - 4970824
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaa 182  Q
    ||||||||||||||| ||||||||||  |||| ||||| ||| ||||||||||||||||    
T  4970882 aaattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaa 4970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 5947283 - 5947333
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||| |||||||    
T  5947283 taagctgtaaaaagcatatgaaaaatgtcataagctggtttcaaaagttct 5947333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 33678759 - 33678873
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||| |||||||||   ||||||||  ||||| |||||||||||| || ||||| ||||  |||| |||||| | || ||||| | ||| ||||| ||    
T  33678759 ttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttg 33678858  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  33678859 ttttcataagttctc 33678873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 43219672 - 43219623
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  43219672 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 43219623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 20526971 - 20526906
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||  ||||||||||| | ||||| || | | ||||||||||||||||| |||||||    
T  20526971 agaacttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcatcagttctc 20526906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 40377943 - 40377838
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||| ||||||||| || |  |||| ||||| |||| |||| || |||||||||||||  ||| || |||||||||||| ||||  |||| ||||||    
T  40377943 ttaaattctttttgtatatgttgcaagttgttttcataacctatattggagaacttatgaaaataaactcaaaaaagcttattaaaatagtcaaaagctg 40377844  T
Q  222 ttttca 227  Q
    ||||||    
T  40377843 ttttca 40377838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 7467588 - 7467648
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggttttataagctatcttagagaacttatgaa 182  Q
    ||||||||||||| |||| ||||||||||| ||| | ||| |||||||| |||||||||||    
T  7467588 ttaaattgttttttgtatatgctataagtgatttcagaagttatcttagtgaacttatgaa 7467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 18865130 - 18865050
Alignment:
Q  135 tgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat 215  Q
    ||||| ||||||||||  ||| ||||| ||| | ||||||||||||||  |||| |||||||| ||||| |||| ||||||    
T  18865130 tgtatatgctataagttttttcataagttatttcagagaacttatgaaaataagttgaaaaaaacttataaaaaatgtcat 18865050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 20234461 - 20234505
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttta-taagctat 165  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||    
T  20234461 attaaattgtttttgtaattgctataagttgttttactaagctat 20234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 27288003 - 27288039
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  27288003 cttatgaaaattgttataagctgttttcataagttct 27288039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 43219832 - 43219785
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  43219832 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 43694661 - 43694601
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaa 182  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| |   ||||||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaa 43694601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 53789553 - 53789438
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    |||||| |||||| |||| |||||||||| ||| | |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  53789553 attaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagct 53789454  T
Q  221 gttttcataagttctc 236  Q
    |||| || ||||||||    
T  53789453 gtttccaaaagttctc 53789438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 20880455 - 20880569
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||  || ||||| ||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  222 ttttcataagttctc 236  Q
    |||||||| ||||||    
T  20880555 ttttcataggttctc 20880569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 30443872 - 30443981
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||| |||||||| ||||||||| || |||||||| |||| || |||||||||||||  ||||||||||||||||| |||||| ||||||||||||    
T  30443872 ttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctg 30443971  T
Q  222 ttttcataag 231  Q
    ||||||||||    
T  30443972 ttttcataag 30443981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 39980708 - 39980822
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||| |  |||||||||| ||||| ||||||||| || |||||||||||||  |||| ||||||||||||||||||   |||||||||||    
T  39980708 ttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctg 39980807  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  39980808 ttttcataagttctc 39980822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 18405914 - 18405809
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||||  |||||| |||||||||||||| | | |||||||||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcata 18405815  T
Q  230 agttct 235  Q
    ||||||    
T  18405814 agttct 18405809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 21367646 - 21367760
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||    ||||||| ||||| |||||||||||| |||||||||||||  ||||||||||| ||||| |||| | ||||||||||||    
T  21367646 ttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctg 21367745  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  21367746 ttttcataagttctc 21367760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 36631142 - 36631030
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||  |||||||||| ||||| || |||||| || |||||||||||||  ||||| ||||||||||| ||||||  |||||||||||    
T  36631142 ttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctg 36631043  T
Q  222 ttttcataagttc 234  Q
     ||||||||||||    
T  36631042 gtttcataagttc 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 402633 - 402519
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | |||||| || |||||||| |||||||  ||||||| |||| |||||||||||| |||||||||| | ||||||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctg 402534  T
Q  222 ttttcataagttctc 236  Q
    |||||||| ||||||    
T  402533 ttttcatacgttctc 402519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 20170502 - 20170616
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| | ||| ||| || ||||||| |||||  |||| ||||||||||||||||||| |  ||| |||||    
T  20170502 ttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaaaagcttatgaaaaatcccattagctg 20170601  T
Q  222 ttttcataagttctc 236  Q
    ||||| |||||||||    
T  20170602 ttttcttaagttctc 20170616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 46778281 - 46778168
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| | ||||||||   ||||| |||| ||||||| || |||||||||| | |||||||| ||| |||||||||| ||||||||| ||    
T  46778281 ttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaat-aagctgaacaaaacttatgaaaaatgtcataagttg 46778183  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  46778182 ttttcataagttctc 46778168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 901934 - 902014
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||| || |||||||||||||  |||| ||||||||||||||| ||| ||| || |||||||||||||||||    
T  901934 ttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagtt 902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 241
Target Start/End: Original strand, 584025 - 584144
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtg-gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||   ||||||||||  |||| ||||||||||||  |||||||||||| ||||||| ||| || | |||||||| || | |||||||    
T  584025 ttaaattgtttttgttcatgctataagttagtttcataagctatcttgaagaacttatgaaattaagcttaaagaaacctatgaaaactgccgtaagctg 584124  T
Q  222 ttttcataagttctcgaaaa 241  Q
    ||||||||| ||||| ||||    
T  584125 ttttcataaattctccaaaa 584144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 24085398 - 24085315
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| ||||||||||| |||||||| ||||  ||||||||||| ||| |||||| |||  ||||||||||||||||||||||||    
T  24085398 ttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctc 24085315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 22203429 - 22203523
Alignment:
Q  143 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| ||||| |||||||||||| |||||||||||||  ||| ||| |  ||||||| | ||| |||||||||||||||||||||||||||    
T  22203429 ctataagttgttttcataagctatcttggagaacttatgaaaataaactgcattaagcttaagtaaaatgtcataagctgttttcataagttctc 22203523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 35959547 - 35959454
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat 215  Q
    ||||||| ||||||||| |||| ||||| |||| |||||||||| |||||||| || ||||  ||||||||||||||||| |||||| ||||||    
T  35959547 ttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtcat 35959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 37689212 - 37689322
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| ||||||| || ||||| || || ||| | |||| |||||||||  |||| |||||||||||| |||||| ||||||||||||||    
T  37689212 aaattgtttttgtatatgctataggttgtttttatgag-tatatcagagcacttatgaaaataagttgaaaaaagctt-tgaaaattgtcataagctgtt 37689309  T
Q  224 ttcataagttctc 236  Q
    ||| |||||||||    
T  37689310 ttcttaagttctc 37689322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 46478684 - 46478767
Alignment:
Q  141 tgctataagt-ggttttataagctatct--tagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||| ||||||||||||||| |  | |||||||||||||  |||| ||||||||||||||||||| ||||||||||||    
T  46478684 tgctataagttggttttataagctatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaactgtcataagctg 46478767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 20257514 - 20257629
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttat-aagctatcttagagaacttatgaatt-taagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||| || |||| ||||||||   |||| |  ||||| |||||||||| |||||| ||||    
T  20257514 ttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaaataagttttaaaaaacttatgaaaattgtcattagct 20257613  T
Q  221 gttttcataagttctc 236  Q
    | ||||||||||||||    
T  20257614 gctttcataagttctc 20257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 46031004 - 46031083
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| ||||||| |||||||||| ||  ||||||||||| |||||||||| | ||||||| ||||||||| |||||||||    
T  46031004 ataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctc 46031083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 49556900 - 49556951
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  49556900 taagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctc 49556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 31365211 - 31365165
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  31365211 tgaaaaaagcttatgaaaattgtcataagctgctttcataagttctc 31365165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 45541585 - 45541662
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||| || |||||||||   ||| ||||||| |||||||||| | ||||||||||||||||||||||||||    
T  45541585 ataagctatcttggataacttatgagaataacctgaaaacagcttatgaaca-tgtcataagctgttttcataagttct 45541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 47132309 - 47132391
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 203  Q
    |||||||||||||||||| ||||||| || ||||| ||||||||| || ||||| |||||||  |||| ||||||||||||||    
T  47132309 attaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaaaagcttat 47132391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 4401026 - 4401127
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||| |||| |||| |||||||||| ||||||  || ||| || |||||||||||||  |||| | |||| |||||||| ||| |||||||||||||    
T  4401026 ttaaattattttcgtatatgctataagttgtttta--agttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctgt 4401123  T
Q  223 tttc 226  Q
    ||||    
T  4401124 tttc 4401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 28795910 - 28795839
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    |||||||||| ||||||||||||||||  ||||||||||| |||||| ||||| ||||| || | |||||||    
T  28795910 tataagctatattagagaacttatgaaaataagctgaaaagagcttaagaaaattgtcaaaaaccgttttca 28795839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 34610862 - 34610783
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| | |||||||||||  | |||||||||   |||||||| | |||||||||| ||||||||||||||||    
T  34610862 ataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctc 34610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 44061114 - 44061032
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatga 205  Q
    ||||||||||||| |||  ||||||||| ||||| ||| | |||||||||||||||||||| ||||||| |||| |||||||||    
T  44061114 ttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct-aaaacagcttatga 44061032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 9832797 - 9832732
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| ||| |||| ||||||||| |||||||||  | ||||||||||||||| ||||||||    
T  9832797 agaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctc 9832732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 33883806 - 33883757
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 206  Q
    ||||||||||||||||||||||||||  ||||||||||| | ||||||||    
T  33883806 ataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaa 33883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 466207 - 466275
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||||||| || |||||||||||||  |||||| ||||||||||| ||||| ||| | ||||||||||    
T  466207 ataagctatgttggagaacttatgaaaataagctaaaaaaagcttaagaaaaatgttaaaagctgtttt 466275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 26911627 - 26911671
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||    
T  26911627 taagttgaaaaaaacttatgaaaattgtcataagctgttttcata 26911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 5391910 - 5391968
Alignment:
Q  174 acttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||  |||| |||||| |||||||||| | ||||||||||||||||||||||||    
T  5391910 acttatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 10277365 - 10277322
Alignment:
Q  193 aaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||    
T  10277365 aaaaagcttatggaaaatgtcataagctgttttcatatgttctc 10277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 13715665 - 13715560
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt---ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagc 219  Q
    |||| ||| |||||||| || ||||||| |||||   |||||| || || || ||||||||||  |||| ||||||| ||||||||||  ||||||||||    
T  13715665 ttaatttgattttgtatatgatataagttgtttttatataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagc 13715566  T
Q  220 tgtttt 225  Q
    ||||||    
T  13715565 tgtttt 13715560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 30573970 - 30573892
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| |||| || |||||  ||||||||||| |||||||||| | || |||||  |||||||||||||||||    
T  30573970 ataagctatcttggagagctgatgaacataagctgaaaacagcttatgaaca-tgccataatttgttttcataagttctc 30573892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 3845618 - 3845549
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    ||||| |||||| |||||||||||||  |||||||||||||| |||| |||| |||||||| |||| ||||    
T  3845618 ataagttatcttggagaacttatgaaaataagctgaaaaaagattat-aaaaatgtcataatctgtcttca 3845549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 30956717 - 30956659
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 180  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30956717 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 30972529 - 30972471
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 180  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30972529 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 39602266 - 39602193
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 231  Q
    |||||||||||| |||||||||||||  |||| |||||| |  ||||||| | ||||||||||||| ||||||||    
T  39602266 ataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaaca-tgtcataagctgtcttcataag 39602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 39723268 - 39723219
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  39723268 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 39723219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 46886783 - 46886677
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||| |||||||||  ||||||||  ||||| |||||||||||| |||||||| ||||  ||| ||||| | | |||| ||| | || |||||||||    
T  46886783 ttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaacataacttacgaacaatgccataagctg 46886684  T
Q  222 ttttcat 228  Q
    |||||||    
T  46886683 ttttcat 46886677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 944591 - 944652
Alignment:
Q  172 gaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| ||||||  |||| ||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  944591 gaacatatgaaagtaagttgaaaaaagattatggaaattgtcataagctattttcataagtt 944652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 25453897 - 25453836
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||  ||||||||||| ||||| |||| | | ||||||||||||||||||| |||||    
T  25453897 cttatgaaaataagctgaaaagagcttgtgaacattttcataagctgttttcataaattctc 25453836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 43062718 - 43062779
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 231  Q
    |||||||||||||   |||||||||||||||| |||||| || ||||  |||||||||||||    
T  43062718 gagaacttatgaaaagaagctgaaaaaagcttgtgaaaattgccatatactgttttcataag 43062779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 1816568 - 1816675
Alignment:
Q  129 tgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    |||||||||||  | ||||||| ||||| |||||||||  | |||| ||||| ||  ||||||||||| ||| |||||||| ||||||||| | ||||||    
T  1816568 tgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaa-tgtcataagttattttca 1816666  T
Q  228 taagttctc 236  Q
    || ||||||    
T  1816667 tatgttctc 1816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 26990546 - 26990502
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagctta 202  Q
    ||||||||||  |||||||||||||  ||||||||||||||||||    
T  26990546 taagctatctcggagaacttatgaaaataagctgaaaaaagctta 26990502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 28622090 - 28622006
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 206  Q
    |||| |||||||||| |  ||||||||  ||||| |||| ||||||| |||||||||||||  ||| ||||||| ||||||||||    
T  28622090 ttaagttgtttttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatgaa 28622006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 31365322 - 31365286
Alignment:
Q  200 ttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  31365322 ttatgaaaattgtcataagctgtattcataagttctc 31365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 37389196 - 37389276
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| ||| ||||||||   |||||| |||  ||| | |||| | ||||||||| |||||||||||||||||    
T  37389196 tataagctatcttggagtacttatgagaataagctaaaagcagcatttgaacaatgtcataagttgttttcataagttctc 37389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 39723428 - 39723381
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  39723428 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 17822956 - 17822842
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||| || ||| |||||||||| ||||| |||||||||||| |||||||||||||  |||||| ||||||||||||||||| ||||||||||||    
T  17822956 ttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctg 17822857  T
Q  222 ttttcataagttctc 236  Q
    |||||||| ||||||    
T  17822856 ttttcatatgttctc 17822842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 50681180 - 50681066
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| |||| |||||||||| || ||||| |||||||  |||  ||||||||||||||||||| |||||| | |||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactg 50681081  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  50681080 ttttcataagttctc 50681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 21731742 - 21731633
Alignment:
Q  128 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||| |||||||||| ||||| ||||||||| || ||||| |||||||  |||| ||||||||| ||||||||| ||| |||||||||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttc 21731643  T
Q  227 ataagttctc 236  Q
    ||||||||||    
T  21731642 ataagttctc 21731633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 13126630 - 13126554
Alignment:
Q  159 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttct 13126554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 29657393 - 29657477
Alignment:
Q  152 gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| ||||||| |||||||| ||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||||||    
T  29657393 gttttacaagctatattagagaagttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagttctc 29657477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 30668426 - 30668339
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    |||||||||||||||| || |  ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  30668426 ttttataagctatcttggatagtttatgaaattaagctgaaaaa-gcttatgaaaagtgtcataagctgttttcacaagttctccaaaa 30668339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 22030190 - 22030296
Alignment:
Q  131 tttttgtatttgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||| ||| ||| ||  ||||||||||||||||  ||| |||| |||||||| |||||| ||||||||||||||||||||    
T  22030190 tttttgtatatgctataagttgttcttacaagttaaattagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcata 22030289  T
Q  230 agttctc 236  Q
    |||||||    
T  22030290 agttctc 22030296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 55414503 - 55414406
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    |||||| || |||||||| | ||||| ||||| |||||| |||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||||    
T  55414503 tttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 50662818 - 50662715
Alignment:
Q  134 ttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||| |||||||||| |||| |||||||||| || ||||| || ||||  |||| ||||||||||||||||||| |||||| | ||||||||||||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagt 50662719  T
Q  233 tctc 236  Q
    ||||    
T  50662718 tctc 50662715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 54426053 - 54426136
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| |||| || |||||||||||||  |||  ||||||||||||||||||| ||||||||||||||||| |||||||||    
T  54426053 ttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctc 54426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 7839450 - 7839344
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| |||||||| | ||||| ||||||||  ||  |||||||| |||  |||| ||||||||||||||||||| ||||||||| ||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 7839351  T
Q  224 ttcataa 230  Q
    |||||||    
T  7839350 ttcataa 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 25904280 - 25904200
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| | || |||||||||| ||  |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  25904280 tataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctc 25904200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 2244032 - 2244133
Alignment:
Q  128 ttgtttttgtatt-tgctataagtggtttta---taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||| |||||||||| ||||||   |||||||| || |||||||||||||  |||| ||||||||| ||||||| | ||||||||||||||    
T  2244032 ttgtttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtt 2244131  T
Q  224 tt 225  Q
    ||    
T  2244132 tt 2244133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 53294205 - 53294094
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| |||| |||| ||||||||||||||||   |||||||||| ||||| ||||||   ||||||  ||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttg 53294106  T
Q  222 ttttcataagtt 233  Q
    ||||||| ||||    
T  53294105 ttttcatgagtt 53294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 26924 - 26841
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 237  Q
    ||||||||||||| || |||||||||||||  ||| |||||||| |||| |||||  ||||||||||||||||||||| ||||||    
T  26924 ttttataagctatattggagaacttatgaaaataatctgaaaaa-gcttgtgaaatttgtcataagctgttttcataatttctcg 26841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 55302263 - 55302339
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| || || ||||||||||  |||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  55302263 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagtt 55302339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 39603230 - 39603147
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| ||| || |||||||||||||  |||  | |||||||||||| |||| ||||||||||||||||| |||||||||    
T  39603230 ttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctc 39603147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 41512633 - 41512744
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||  | |||||||||| ||||| ||||||| |||   ||||||||||||  |||| ||| ||||||||||||||||||| ||||||||| |    
T  41512633 aattgtttttgcgtatgctataagttgttttcataagctttctggaagaacttatgaaaataagatgataaaagcttatgaaaagtgttataagctgtat 41512732  T
Q  225 tcataagttctc 236  Q
    |  |||||||||    
T  41512733 ttgtaagttctc 41512744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 35571718 - 35571608
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    |||||||| ||||  ||||||||  ||||| ||||||||||||||||||||| ||||  |||| |||||  |||| ||||| ||||| ||||||||||||    
T  35571718 attgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttt 35571619  T
Q  226 cataagttctc 236  Q
     | ||||||||    
T  35571618 taaaagttctc 35571608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 41336802 - 41336852
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41336802 taagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttct 41336852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 24169279 - 24169356
Alignment:
Q  159 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| |||| ||||||||  |||| |||||||| |||||||||| ||||||||||| |||| | ||||||||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctc 24169356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 37864043 - 37863932
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||| |  | ||||||  |||| |||||||||||| | ||  ||||||||| ||| |||||| | ||||||||  ||||||||||||||    
T  37864043 ttaaattgtttttgtttaagatataagctgtttcataagctatcttggtgaggttatgaatt-aaggtgaaaacaacttatgaac-gtgtcataagctgt 37863946  T
Q  223 tttcataagttctc 236  Q
    ||||||||||||||    
T  37863945 tttcataagttctc 37863932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 55064855 - 55064928
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| |||||||||||||  |||| |||||||||||  |||||| ||||||||| |||||||| ||||||||    
T  55064855 tatcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctc 55064928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 2996554 - 2996665
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| |||  | ||||||| ||||| |||||||||||| |||| | ||||||  |||| ||||||||||||||| | | ||||||||| ||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggaca-tgtcataagttgtt 2996652  T
Q  224 ttcataagttctc 236  Q
    |||||||| ||||    
T  2996653 ttcataagctctc 2996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 20109611 - 20109678
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| ||  | ||| ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  20109611 agagaacttataaaaatcagcagaaaaaaacttatgaaaaatgtcataagctgttttcaaaagttctc 20109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 25332753 - 25332868
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttag-agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    |||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||  ||||||||||| | |||||||| | || |||||| |    
T  25332753 ttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaacaacttatgaataatgccataagtt 25332852  T
Q  221 gttttcataagttctc 236  Q
    ||||||  ||||||||    
T  25332853 gttttcgcaagttctc 25332868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 46588157 - 46588051
Alignment:
Q  131 tttttgtatttgctataagtggtttt--ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 228  Q
    ||||| ||| |||||||||| |||||  ||||| ||| || |||||||||||||  |||| || |||| ||||||||||| ||||||||| | ||||| |    
T  46588157 tttttatatatgctataagttgttttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcgt 46588058  T
Q  229 aagttct 235  Q
    |||||||    
T  46588057 aagttct 46588051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 1407970 - 1408040
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaa-agcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||  || || |||||||  |||||||||||| |||||||||||| |||||||||||||||||    
T  1407970 ataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagctgttttc 1408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 20108988 - 20109102
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||| |||||||||||| || |||||| || ||||||||| ||| ||||||||||| ||||  | ||  ||||||||||| |||||  | ||| ||| ||    
T  20108988 ttaagttgtttttgtatatggtataagctgtttttataagatatattagagaacttttgaaaatgagtcgaaaaaagcttgtgaaatttttcacaaggtg 20109087  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  20109088 ttttcataagttctc 20109102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 49939979 - 49939929
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||||||||||    
T  49939979 taagctgaaaacagcttatgaacaatgtcataagctcttttcataagttct 49939929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 21523585 - 21523649
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||| |||||||  ||||||||||| |||||||||||| ||||||||| ||||||||||| ||||    
T  21523585 gagaagttatgaaaataagctgaaaa-agcttatgaaaaatgtcataagttgttttcataaattct 21523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 227
Target Start/End: Complemental strand, 54069508 - 54069403
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||| | ||||| ||||| ||| ||  ||||| ||||||  |||| | |||| |||||||||||| |||  |||||||    
T  54069508 ttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaaaattgttgtaagctg 54069409  T
Q  222 ttttca 227  Q
    ||||||    
T  54069408 ttttca 54069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 43886159 - 43886112
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||    
T  43886159 taagctgaaaatagcttatgaaaa-tgccataagctgttttcataagtt 43886112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 56249566 - 56249613
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  56249566 taagttgaaaaaagcttatgaaaa-tgtcataagctgttttgataagtt 56249613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 3070003 - 3069960
Alignment:
Q  184 ttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  3070003 ttaagttgaaaaaagcttatgaaaaatgtcataagatgttttca 3069960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 16200066 - 16199991
Alignment:
Q  129 tgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 203  Q
    ||||||||||| |||||||||  ||||| |||||||||||| ||| |||||||||  |||||| ||||| ||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaaaggcttat 16199991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 28614864 - 28614817
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatg 204  Q
    |||||||||| |||||||||||||||  ||||||||||| ||||||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatg 28614817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 15177293 - 15177207
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtgg-ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    |||||||||| || ||| |||||||||||| |||||||||||||  ||||||||| |||||  | |  |||||||| ||||||||||    
T  15177293 ttaaattgttcttctatgtgctataagtggtttttataagctatactagagaactaatgaaaatcatttgaaaaaaacttatgaaaa 15177207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 29388593 - 29388707
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||  ||  |||||| ||||| |||||||||  | ||||| |||||||  |||| |||||| ||| ||| |||| |||||||| |||    
T  29388593 ttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataagttgaaaagagcatataaaaattgtcataaactg 29388692  T
Q  222 ttttcataagttctc 236  Q
     |||| |||||||||    
T  29388693 ctttcgtaagttctc 29388707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 46592269 - 46592187
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||| ||| || |||||||||||||  |||| || |||| ||||||||||| ||||||||| | ||||  ||||||||    
T  46592269 ttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttatttttgtaagttct 46592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 29912936 - 29913040
Alignment:
Q  132 ttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    |||||||| || || |||| ||||| |||||||||||| || ||||||| ||  ||||||||||| | || | ||||| ||||| ||||| |||||||||    
T  29912936 ttttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagctgaaaagaactaaggaaaaatgtca-aagctattttcataa 29913034  T
Q  231 gttctc 236  Q
    ||||||    
T  29913035 gttctc 29913040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 49003912 - 49003859
Alignment:
Q  176 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||| |||||||| |||||||||||||| | ||||||| ||| ||||||||    
T  49003912 ttatgaaattaagctggaaaaagcttatgaacaatgtcatacgctcttttcata 49003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 1203172 - 1203088
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    ||||| |||||| |||||||||| ||  |||||| |||| || ||| | ||| | ||||||||||||||| ||||||||| ||||    
T  1203172 ataagttatcttggagaacttattaaaataagctaaaaacagtttacggaaaatatcataagctgttttcgtaagttctctaaaa 1203088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 15173326 - 15173286
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  15173326 tgaaaaaaacttatgaaaattgtcataagctattttcataa 15173286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 20031763 - 20031831
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaa-agcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||| ||||||||||||||||  | |||||||||| ||||||| || | || ||||||||||||    
T  20031763 ataagctattttagagaacttatgaaaatgagctgaaaaacagcttatcaacaatgccataagctgttt 20031831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 40831106 - 40831019
Alignment:
Q  137 tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||| |||||| ||||| ||||||||  || ||||||||||||| | ||| |||||||||||||| |||  |||| ||||||||||    
T  40831106 tatttgcaataagttgtttttataagctagattggagaacttatgaaat-aagttgaaaaaagcttataaaagttgtcgtaagctgttt 40831019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 41851514 - 41851628
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| | |||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  41851514 ttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttg 41851613  T
Q  222 ttttcataagttctc 236  Q
    ||| ||||| |||||    
T  41851614 tttccataaattctc 41851628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 45229491 - 45229604
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||| || ||| | || ||| |||||||||||| |||||||||||||  |||||||||||||||| ||||||| ||||||||| | |    
T  45229491 ttaaattgtttttgtatatgttatcattgttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtct 45229590  T
Q  223 tttcataagttctc 236  Q
    ||||||||||||||    
T  45229591 tttcataagttctc 45229604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 43279616 - 43279506
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    |||||||||||||||  ||||||||| ||||| ||||||||| || |||||||| ||||  |||| ||||||||||||||||||| ||||||||||||||    
T  43279616 aaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 43279519  T
Q  224 ttcataagttctc 236  Q
    ||||||| |||||    
T  43279518 ttcataaattctc 43279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 41812181 - 41812069
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||| ||||| |||  |||| | |||||||||| || |||||| ||| | ||| ||||||||||||||||||| |||||||||||||    
T  41812181 ttaaattgtttttgtatatgctacaagatgtttcaaaagctatcttggaaaacttaggaaat-aagttgaaaaaagcttatgaaaaatgtcataagctgt 41812083  T
Q  223 tttcataagttctc 236  Q
    ||||| ||||||||    
T  41812082 tttcaaaagttctc 41812069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 15757750 - 15757635
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||   ||||||| ||||||  ||||||||||||||||| |||||| ||||||||||     
T  15757750 ttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtcataagca 15757651  T
Q  221 gttttcataagttctc 236  Q
    |||||||||| |||||    
T  15757650 gttttcataaattctc 15757635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 33981140 - 33981212
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||| ||||| ||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  33981140 gctatcttggagaatttatgaaattaagttgaaaaaagcttatgaaatgtgtcataagccgttttcataagtt 33981212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 32592566 - 32592679
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  ||||||||| ||||| |||||| || || |||||||||||||  |||| ||| ||||||||||||||| |||| ||||||     
T  32592566 ttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagcta 32592664  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  32592665 ttttcataagttctc 32592679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 39659600 - 39659486
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| | || ||||| | ||||| ||||||||| ||||||||||||||||  |||| ||| |||||||||  |||  ||||||||||||    
T  39659600 ttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctg 39659501  T
Q  222 ttttcataagttctc 236  Q
    ||||| |||||||||    
T  39659500 ttttcgtaagttctc 39659486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 41241223 - 41241111
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| |||||  |||| |||||| || ||||| |||| ||||||||||||||||||||| |||| || ||||  ||    
T  41241223 ttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaaaaaagcttatggaaag-gttataatttg 41241125  T
Q  222 ttttcataagttct 235  Q
    |||||| |||||||    
T  41241124 ttttcacaagttct 41241111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 12464564 - 12464461
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||   |||| |||||||||||| |||||||| ||||  ||||||||||||||||| |||||  |||| ||||||     
T  12464564 ttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaaatatgtcgtaagctt 12464465  T
Q  222 tttt 225  Q
    ||||    
T  12464464 tttt 12464461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 18066107 - 18066218
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||  |||  ||||||||  ||||| |||||||||||| ||||||||| |||  |||| |||||| |||||||||  | ||||||||||||    
T  18066107 ttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctg 18066206  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  18066207 ttttcataagtt 18066218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 26202025 - 26202120
Alignment:
Q  141 tgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||| ||||| ||||| ||| || |||||||||||||  |||| ||||||||||||||||||| ||||||||| |||| |||||| ||||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattct 26202120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 41293219 - 41293140
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| | ||| |||||||||| ||||||||||| ||||||||  || |||||||||||||||| ||||||||||    
T  41293219 ataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctc 41293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 1625879 - 1625993
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | ||||||| ||||| |||||||||||| ||||||||| |||  | ||||||||| | |||||||| | |||||||||||     
T  1625879 ttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagcta 1625978  T
Q  222 ttttcataagttctc 236  Q
     ||||||||||||||    
T  1625979 ctttcataagttctc 1625993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 5745873 - 5745763
Alignment:
Q  126 aattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||| ||| ||||||||||  ||| |||||||||| || ||| ||||| |||  | || || |||||||||||||||| |||||||||||||||    
T  5745873 aattgtttttttatatgctataagttatttctataagctatatttgaggacttaggaaaattagttggaaaaagcttatgaaaattgtcataagctgttt 5745774  T
Q  225 tcataagttct 235  Q
    |||||| ||||    
T  5745773 tcataaattct 5745763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 20952342 - 20952448
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||| ||| |||||||||| ||||| || |||||| || |||||||||||||  |||| ||||||||| | ||||||| || ||||| |||||||||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcata 20952441  T
Q  230 agttctc 236  Q
    |||||||    
T  20952442 agttctc 20952448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 20926516 - 20926595
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||| ||||||| |||||||| ||  ||||||||||||||    
T  20926516 tataagctatattagagaacttatgaaaataagttgaaaaaagctaatgaaaattgtcataaact-atttcataagttctc 20926595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 750679 - 750762
Alignment:
Q  152 gttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||| |||||||||||| ||||||||||| |  |||||| |||| |||||||||| | |||||| |||| ||||||||||||||    
T  750679 gtttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttct 750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 13325596 - 13325663
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||||  | ||||||||||||||||||  || |||||||||||||||||| ||||||||    
T  13325596 agagaacttatgaaaatgagctgaaaaaagcttatgtgaaatgtcataagctgttttcaaaagttctc 13325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 7035627 - 7035545
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||| ||||||| || ||||||||||  ||||| ||||| | ||||||||  |||||||||||||||| ||||||||||    
T  7035627 ttttataaactatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttct 7035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 16451133 - 16451211
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| |||||||  ||||  ||||||||||| |||| ||||| | ||||||||| |||||||||||||||||    
T  16451133 taagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctc 16451211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 26626852 - 26626966
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  |||| |||  ||||| ||||||||||||  ||||||||||||  ||| ||||||| || ||||||| | |||||||||||     
T  26626852 ttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataagcta 26626951  T
Q  222 ttttcataagttctc 236  Q
    ||||| |||||||||    
T  26626952 ttttcgtaagttctc 26626966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 9174808 - 9174897
Alignment:
Q  137 tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||| |||||||  ||||| ||||||||||||| ||| ||||||||  ||||||||||| |||||||||| | ||||||||| ||||||    
T  9174808 tatttactataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgtttt 9174897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 33192209 - 33192293
Alignment:
Q  150 tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||| |||||||||| | |||| ||||| ||| ||||||||||| |||||||| | | |||||||| |||||||||||||||||    
T  33192209 tggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatggata-tgtcataaactgttttcataagttct 33192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 40279176 - 40279285
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  | ||||||| ||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||    
T  40279176 ttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgccataagttg 40279275  T
Q  222 ttttcataag 231  Q
    ||||||||||    
T  40279276 ttttcataag 40279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 43570446 - 43570506
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||  |||||| ||||||||||||||| | |||||||||||||||||||||||||||    
T  43570446 cttatgaaaataagct-aaaaaagcttatgaacaatgtcataagctgttttcataagttctc 43570506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 1647249 - 1647327
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||  |||||| |||||| |  ||||||||||| |||||||||  | ||||||||||||||||||||||||||    
T  1647249 tataagctattatagagagcttatggaaataagctgaaaacagcttatgagca-tgtcataagctgttttcataagttct 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 4606939 - 4607018
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| |||||||||||||  |||||| |||  |||| ||||| | ||||||||| |||||||| ||||||||    
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctc 4607018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 7928351 - 7928276
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgt-cataagctgttttcataagttct 235  Q
    |||||||| |||||||||||||  ||||||||||| | |||||||| | ||| ||||||||||||||| |||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttct 7928276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 23974547 - 23974465
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    |||||||| || |||||||||||||  | |||  |||||| ||| |||||| ||||||||||||||||||||||||||| ||||    
T  23974547 taagctatatttgagaacttatgaaaatgagccaaaaaaa-cttgtgaaaattgtcataagctgttttcataagttctccaaaa 23974465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 33319903 - 33319807
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||| ||||||||||| | ||||||   ||||| |||| ||||||| |||||||||||||  ||||||||||||||||||| |||  |||||||||||    
T  33319903 ttaaactgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaa--tgtcataagct 33319807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 41407280 - 41407394
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| |||| ||||||||||  |||| ||||| | |||| |||||||| ||||  ||| || ||| ||||||||||||| || |||||||     
T  41407280 ttaaattgttttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaataaccttaaacaagcttatgaaaaatgccataagcc 41407379  T
Q  221 gttttcataagttct 235  Q
    ||||| |||||||||    
T  41407380 gttttaataagttct 41407394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 2227194 - 2227259
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| |||  |||||||||||| | ||||||||| ||||||||||||||||  |||||||||    
T  2227194 agaacttacgaaaataagctgaaaaatgtttatgaaaaatgtcataagctgtttttttaagttctc 2227259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 225
Target Start/End: Original strand, 12289774 - 12289879
Alignment:
Q  122 attaaattgtttttg-tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagc 219  Q
    ||||||||||||||| ||  || ||||||| ||||| ||||  ||| || |||||||||||||  |||| ||||||||||||||||| | |||||||| |    
T  12289774 attaaattgtttttggtacatgttataagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatattgtcataaac 12289873  T
Q  220 tgtttt 225  Q
    ||||||    
T  12289874 tgtttt 12289879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 38916330 - 38916286
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||||||||| | |||||| |||||||||||||||    
T  38916330 aaaaaagcttatgaaaagtggcgtaagcttttttcataagttctc 38916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 39073780 - 39073684
Alignment:
Q  123 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 218  Q
    ||||||||||||||||| ||||||||||   ||||||||||||| || |||||||  ||||  |||| ||||  || |||||||||| |||||||||    
T  39073780 ttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaacgaaacttatgaaaattgtcataag 39073684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 449877 - 449936
Alignment:
Q  173 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 232  Q
    ||||||| || ||||| | |||| |||||||||||| |||||||||||||||||| ||||    
T  449877 aacttatcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagt 449936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 680483 - 680589
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||| ||||  ||||||||   |||| ||||||||||||  ||||||| ||||  ||||||||||| || |||| || | |||||||||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaaca-tgtcataagctgt 680581  T
Q  223 tttcataa 230  Q
    ||||||||    
T  680582 tttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 787374 - 787424
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| |||||||| | | |||||||||||||||||||||||||||    
T  787374 taagctgaaaacagcttatggaca-tgtcataagctgttttcataagttctc 787424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 8017448 - 8017526
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| |||||||||||||  || || ||||| |  ||||||| | | |||||||||||||||||||||||||    
T  8017448 ataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaaca-tatcataagctgttttcataagttctc 8017526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 28677687 - 28677637
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||| ||||| | |||||||||| |||||||||||||||||||||||||||    
T  28677687 taagccgaaaacaacttatgaaaa-tgtcataagctgttttcataagttctc 28677637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 33503049 - 33503099
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||| |||||    
T  33503049 taagctgaaaatagcttatgaaaa-tgtcataagctgatttcataaattctc 33503099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 35379072 - 35378994
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| |||| ||||||||  ||||||||||| | |||||||| |  ||||| ||||||||||||||| ||||    
T  35379072 ataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaaca-agtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 36125372 - 36125447
Alignment:
Q  154 tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    |||||||||||  || |||||||||||||  |||| | ||||||||||| ||||| ||  ||||||||||||||||    
T  36125372 tttataagctaaattggagaacttatgaaaataagttaaaaaaagcttacgaaaattgcaataagctgttttcata 36125447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 40279268 - 40279355
Alignment:
Q  145 ataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 231  Q
    |||||| ||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 40279338 - 40279425
Alignment:
Q  145 ataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 231  Q
    |||||| ||||| ||||||||| || |||||||||||||  | ||||||||| || ||||||| | || |||||| ||||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 3611242 - 3611308
Alignment:
Q  159 aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    |||||||||| |||||||||||||  |||||| |||| || ||||||| | ||||||||| ||||||    
T  3611242 aagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataagttgtttt 3611308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 10258666 - 10258760
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||  ||||||||||| |||| | ||| |||||| | |||||| ||||  |||  |||||||||||||||| || |||||||||||||||    
T  10258666 tttttgtagatgctataagtgattttcagaagttatctttgggaacttctgaaaataaattgaaaaaagcttatgagaactgtcataagctgttt 10258760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 10619279 - 10619197
Alignment:
Q  154 tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||  || ||| |||||||||  |||||||||||| |||   ||||| || |||||||||||||||| |||||||    
T  10619279 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctc 10619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 12194965 - 12195035
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcat-aagctgtttt 225  Q
    |||||| ||| || |||||||| ||||  |||| ||||||||||||||||||| |||||| ||||||||||    
T  12194965 tataagttatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataaagctgtttt 12195035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 31561792 - 31561722
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||||||||||||  |||||| ||| || ||||||||||  |||||| |||||||||| |||||    
T  31561792 tatcttggagaacttatgaaagtaagcttaaacaatcttatgaaaaacgtcatatgctgttttcaaaagtt 31561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 36043924 - 36043994
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||| |||||||| || |||| |||| |||||||||| | |||| |||| ||||||||||||||    
T  36043924 tatcttggagagcttatgaaattgagctaaaaacagcttatgaacaatgtcgtaagttgttttcataagtt 36043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 36114398 - 36114512
Alignment:
Q  123 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||||| |||| || | ||||| |||||||||||| |||| ||||| ||  |||||| |||| ||||| |||| | | |||| || ||    
T  36114398 ttaaattgtttttgtattagctaaaaataggtttcataagctatcttggagatcttataaaaataagctaaaaacagcttttgaacaatttcattagttg 36114497  T
Q  222 ttttcataagttctc 236  Q
    |||| | ||||||||    
T  36114498 ttttaacaagttctc 36114512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 42420246 - 42420200
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  42420246 tgaaaaaagctaatgaaaattgtcataagttgttttcgtaagttctc 42420200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 2416292 - 2416405
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||  |||  |||||||| || ||||||||| ||| | ||||||||||||||  || |||||||  ||||| |||| | || || ||||||    
T  2416292 ttaaattgttttgatataagctataagctgtttttataagttatataagagaacttatgaaagtatgctgaaattagcttgtgaacaatgacaaaagctg 2416391  T
Q  222 ttttcataagttct 235  Q
    |||| |||||||||    
T  2416392 ttttaataagttct 2416405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 5902576 - 5902528
Alignment:
Q  186 aagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||| || ||||||| | ||||||||||||||||||||||||||    
T  5902576 aagctgaaaacagtttatgaaca-tgtcataagctgttttcataagttct 5902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 11201471 - 11201358
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatt-taagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||| | |||||||| |||||  ||  |||| || |||||||||||||   | || ||||||||||||||||||  |||||||| || |    
T  11201471 aaattgtttttgtatatactataagttgtttttgtatactatattggagaacttatgaaaaatgagttgaaaaaagcttatgaaagttgtcataaactat 11201372  T
Q  223 tttcataagttctc 236  Q
    ||||||||| ||||    
T  11201371 tttcataagctctc 11201358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 12795774 - 12795855
Alignment:
Q  126 aattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaa 207  Q
    ||||||| |||||| |||||||||  ||||| |||||||| || | || |||||| |  ||||| |||||||||||||||||    
T  12795774 aattgttcttgtatatgctataagctgttttttaagctatattggtgagcttatgcaagtaagccgaaaaaagcttatgaaa 12795855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 15305701 - 15305766
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||||  |||| |||||||| |||||||||| || |||||| |||| ||| |||||||    
T  15305701 gagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttct 15305766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 20933787 - 20933824
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  20933787 cttatgaaaattgtcataaactgttttcataagttctc 20933824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 23956120 - 23956038
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaa 207  Q
    |||||||||||||||| ||  | ||||| |||||||||||| | ||  |||| |||||||  |||| ||||||||||||||||||    
T  23956120 ttaaattgtttttgtaatt--tttaagttgttttataagctgtattgaagaatttatgaaaataagttgaaaaaagcttatgaaa 23956038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29316828 - 29316764
Alignment:
Q  160 agctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||||||| ||||||||||| |  ||||||||||| | |||||||| | ||||||||||||||||    
T  29316828 agctatcttggagaacttatggaaataagctgaaaagaacttatgaaca-tgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 42457962 - 42458035
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||||||||||||| ||||||  ||||||||||| | |||||  ||| |||  |||| |||||||||||    
T  42457962 ataagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataa 42458035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 43717193 - 43717117
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||  | || ||||||||  ||||||||||| | | |||||||| |||| |||||||||||||||||||    
T  43717193 tataagctatctccgtgagcttatgaaaataagctgaaaacaacctatgaaaa-tgtcctaagctgttttcataagtt 43717117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 1801721 - 1801760
Alignment:
Q  196 aagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  1801721 aagcttatgaaca-tgtcataagctgttttcataagttctc 1801760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 1810644 - 1810724
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 203  Q
    |||||||||||||||||  | ||||  || ||||||||||||||||  |||  |||||||  |||||||||||||| ||||    
T  1810644 ttaaattgtttttgtataagttatagttgtttttataagctatcttgaagagtttatgaaaataagctgaaaaaagtttat 1810724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 19608661 - 19608609
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 237  Q
    |||||| |||| |||||||||| | ||||||||||||| || |||||||||||    
T  19608661 taagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcg 19608609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 24100977 - 24101021
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||    
T  24100977 aaaaaagcttatgaatattgtcataaggtgtttccataagttctc 24101021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 40158745 - 40158808
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 234  Q
    |||| |||||| | |||||||||||| | ||||| || | |||||||||||||||||||||||||    
T  40158745 gagagcttatgtaattaagctgaaaacaacttataaaca-tgtcataagctgttttcataagttc 40158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 43529903 - 43529836
Alignment:
Q  168 tagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| ||||||||  ||| ||||||| |||||||||| | || |||||||||||||||||| |||||    
T  43529903 tagagagcttatgaaaataaactgaaaatagcttatgaaca-tggcataagctgttttcataaattctc 43529836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 16937974 - 16937861
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||| || ||||||||| |||  |||||||||||||||||||||||  ||||||||||||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  222 ttttcataagttct 235  Q
    ||||||||||||||    
T  16937874 ttttcataagttct 16937861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 16458070 - 16457956
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| || |||||  || |||||||| ||||  ||| ||||||| |||||||||||| ||||||||||||    
T  16458070 ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctg 16457971  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  16457970 ttttcataagttctc 16457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 10639931 - 10640046
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    |||||||||||||||||| ||  || ||| ||||  |||| |||| || |||||||||||||  ||||||  |||||||||||||||| |||||||||||    
T  10639931 attaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagct 10640030  T
Q  221 gttttcataagttctc 236  Q
    ||||||||||||||||    
T  10640031 gttttcataagttctc 10640046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 12857765 - 12857682
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| || |||||||||||||  |||||||||||||| || |||||| ||||||||| |||||||||||||||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctc 12857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 29925820 - 29925934
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| |||||||||| ||||  ||||||||| || |||||||||||||  |||| |||||||| |  ||||| | ||||||||||||    
T  29925820 ttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctg 29925919  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  29925920 ttttcataagttctc 29925934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 39105443 - 39105557
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  |||||||   ||||| |||||||||||| |||||||||||||  |||||| |||| |||||||||| | ||||||||||||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T
Q  222 ttttcataagttctc 236  Q
    ||||||||| |||||    
T  39105543 ttttcataaattctc 39105557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 40426745 - 40426853
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    ||||||||||||||||||||| ||||  ||||   |||||| |||| ||||||||| |||  |||||| ||||||||||||||||| || ||||||||||    
T  40426745 taaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgt 40426844  T
Q  223 tttcataag 231  Q
    |||||||||    
T  40426845 tttcataag 40426853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 12857398 - 12857315
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| || |||||||||  ||  ||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  12857398 ttttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctc 12857315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 3735202 - 3735136
Alignment:
Q  169 agagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  3735202 agagaacttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttct 3735136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 1465091 - 1464997
Alignment:
Q  142 gctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||  |||||||||||||||| ||| |||| ||||  ||||||||||| | |||||||  | || ||||||||||||||||||||||||    
T  1465091 gctataagttattttataagctatcttggaggacttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctc 1464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 32009674 - 32009783
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagctt-atgaaaagtgtcataagctgtt 223  Q
    ||||||| |||||| |||||||| | ||||| ||||||||| || |||||||||||||   ||| | |||||||||| ||||||| ||||| ||||||||    
T  32009674 aattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgtt 32009773  T
Q  224 ttcataagtt 233  Q
    ||||||||||    
T  32009774 ttcataagtt 32009783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 37954696 - 37954773
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||||||| || |||||| ||||||  |||| ||||||||||| ||||||| | |||||||||||||||||||    
T  37954696 ttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataa 37954773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 7706054 - 7705975
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| || |||||||| ||||  ||||| |||||||||   |||||| |||||||||||||||||||||||||||    
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctc 7705975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 2568636 - 2568749
Alignment:
Q  123 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||| ||||  ||||||||| ||||| |||||||||| | |||| || |||||  |||||| |||| | |||||||| | |||||||||||    
T  2568636 ttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaata-tgtcataagct 2568734  T
Q  221 gttttcataagttct 235  Q
    |||||||||||||||    
T  2568735 gttttcataagttct 2568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 35446082 - 35446148
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||  |||||||||||||||||| ||||| |||||||| ||||||||  ||||||||    
T  35446082 gagaacttatgaaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttcgaaagttctc 35446148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 43300865 - 43300971
Alignment:
Q  131 tttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| | |||||||| |||||  ||||||||||| |||||||||||||  |||||||||| | ||||||  ||| ||||||| |||||||| |||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttata 43300964  T
Q  230 agttctc 236  Q
    | |||||    
T  43300965 acttctc 43300971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 25461074 - 25461183
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||||||||||| || ||||||| ||||| ||||||| | || ||||||| |||||  |||||||||||| | ||||||||| || ||||||||| ||     
T  25461074 attgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctgattc 25461173  T
Q  226 cataagttct 235  Q
    || |||||||    
T  25461174 caaaagttct 25461183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 34669773 - 34669708
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct-gttttcataagttc 234  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||| || | ||||||||||||||    
T  34669773 gagaacttctgaaattaagctgaaaaaagcttatgaaaaatgtcattagttagttttcataagttc 34669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 42500298 - 42500219
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| || |||||||||||||  |||| ||||||| ||||||||||| |||| |||| ||||| |||||||||||    
T  42500298 tataagctatattggagaacttatgaaaataagttgaaaaa-gcttatgaaaattgtcgtaagttgtttccataagttctc 42500219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 7984983 - 7985062
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| ||||| |||||||  ||||||||||| |||||||||| |  |||| ||||||||||| |||| ||||    
T  7984983 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctc 7985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 4014480 - 4014426
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtg 211  Q
    |||||||||||| |||||||||||||  ||||||||||| |||||||||| ||||    
T  4014480 ataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaacagtg 4014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 29845489 - 29845413
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| ||||| |||||||| ||||||||||| |||||||  || || ||||||||| |||||||||||||||    
T  29845489 taagctatcttggagaagttatgaatataagctgaaaacagcttat-taacgtatcataagct-ttttcataagttctc 29845413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 39477893 - 39477967
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    ||||||||||||| ||||||||||| ||||  ||||| ||||||| ||| |||||| |||||| |||||| ||||    
T  39477893 ttttataagctatgttagagaacttctgaaaataagcagaaaaaaacttttgaaaattgtcatcagctgtgttca 39477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 42646685 - 42646759
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||| ||||||||||| |  ||| || ||||||||||||||||| |||| ||| || ||||||||||||||    
T  42646685 gctatcttcgagaacttatggaaataaactaaaaaaagcttatgaaaaatgtcctaaacttttttcataagttct 42646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 2973557 - 2973521
Alignment:
Q  200 ttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2973557 ttatgaaaattgtcataagctgttttcataagttctc 2973521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 3280771 - 3280696
Alignment:
Q  157 ataagctatcttagagaactt-atgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||||| |||||||| |||||  ||| || |||| |||||||||| | |||||||||||||||||||||||    
T  3280771 ataagctatctttgagaactttatgaaaataaactaaaaagagcttatgaaga-tgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 9202804 - 9202728
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||| ||||||  ||||||||||||  ||||||| ||| |||||||||| | ||||||||||||||| ||| ||||    
T  9202804 ataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagtt 9202728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 13697828 - 13697764
Alignment:
Q  144 tataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    ||||||| |||||||||||||| || ||||| |||||||  |||| |||||||| ||||||||||    
T  13697828 tataagttgttttataagctatgttggagaagttatgaaaataagttgaaaaaaacttatgaaaa 13697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 3932719 - 3932664
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||||||| |||  ||||||| |||||||||||||||| | ||||||||||||||    
T  3932719 gagaacttacgaaaataagctgtaaaaagcttatgaaaattatcataagctgtttt 3932664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 9107100 - 9107183
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| |||| ||| || |||||||||||||  | ||| |||||||| || |||||| |||| |||||||||||||| |||||||    
T  9107100 ttttgtaagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctc 9107183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 706505 - 706555
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | |||||||| || ||||||||||||||    
T  706505 taagctgaaaatagcttatgaacaatgtcataaactattttcataagttct 706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 6587195 - 6587086
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||| ||||  ||||||||| ||||| |||||||||  | |||||||| ||||  ||||||| ||| ||||||||||   |||||||||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacc-tgtcataagctgttt 6587097  T
Q  225 tcataagttct 235  Q
    |  ||||||||    
T  6587096 ttttaagttct 6587086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 8334601 - 8334663
Alignment:
Q  173 aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||  ||||||||||| |  ||||||||  ||||||||||| ||||||||||||||    
T  8334601 aacttatgaaaataagctgaaaacaatttatgaaatatgtcataagctattttcataagttct 8334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 17368675 - 17368768
Alignment:
Q  143 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| ||||| |||||||||||| ||||  ||||| |  |||||||||||  || |||||| | ||||||||| |||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaaca-tgtcataagttgttttcataagttctc 17368768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 17258921 - 17258861
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||  ||||||||||| |||||||||| | ||||||||||| |||||||| ||||||    
T  17258921 cttatgaaaataagctgaaaacagcttatgaaca-tgtcataagctattttcataggttctc 17258861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 31038333 - 31038374
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31038374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 31047557 - 31047598
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31047598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 32859762 - 32859698
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||| |||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||| ||||    
T  32859762 gagaagttatgaaaataagctgaaaaa-gcttatgaaaaatgtcgtaagttgttttcataaattct 32859698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 32861934 - 32861870
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||| |||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||| ||||    
T  32861934 gagaagttatgaaaataagctgaaaaa-gcttatgaaaaatgtcgtaagttgttttcataaattct 32861870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 34160751 - 34160808
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    |||||| |||||||||||||  ||||||||||| || ||||||| ||||||| |||||    
T  34160751 tatcttggagaacttatgaaaataagctgaaaacagtttatgaacagtgtcacaagct 34160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 3520630 - 3520670
Alignment:
Q  196 aagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  3520630 aagcttatgaaaaaagtcataagatgttttcataagttctc 3520670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 6521119 - 6521171
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataag-ctgttttcataagttctc 236  Q
    ||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||    
T  6521119 taagccgaaaaaagcttgtgaaaattgtcataagtccgttttcataagttctc 6521171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 7907868 - 7907944
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 206  Q
    |||||||||  | ||||||| ||||| ||||||| |||| |||| |||||||| |||||||||||| | ||||||||    
T  7907868 tttttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 26771244 - 26771358
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||| |  ||||||||| ||| ||||||||||||||||  |||| ||||||| |||| |||||| ||||||||||||    
T  26771244 ttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctg 26771343  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  26771344 ttttcataagttctc 26771358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 10758347 - 10758235
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| || |||||||||||| ||||  ||||||||||   |||||||||||||||| |||||| ||||||||||||    
T  10758347 ttaaattgtttttgtatatgctataagttgtctttataagctatattagc-aacttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctg 10758249  T
Q  222 ttttcataagttct 235  Q
    ||||||||| ||||    
T  10758248 ttttcataaattct 10758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 27028810 - 27028924
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||| ||||| |||||||||  ||||| |||||||||||| |||| ||||||||  ||||||||||| |||||||||||| |||| |||||||    
T  27028810 ttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T
Q  222 ttttcataagttctc 236  Q
    |||||| || |||||    
T  27028910 ttttcagaatttctc 27028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 38648329 - 38648444
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||| |||||||||||| || ||| ||| ||||| ||||||||||||  |||||||||||| ||| ||| |||||||||||||| || |||||| ||||    
T  38648329 attaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcatgagct 38648428  T
Q  221 gttttcataagttctc 236  Q
    ||||||||||| ||||    
T  38648429 gttttcataaggtctc 38648444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 18133635 - 18133749
Alignment:
Q  123 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||| |||||||| | ||||||| ||||||||||| |||| || |||||||||||||  ||||||||||||||||| |||||| ||| ||||||||    
T  18133635 ttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctg 18133734  T
Q  222 ttttcataagttctc 236  Q
     ||||| ||| ||||    
T  18133735 atttcacaagctctc 18133749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 25930646 - 25930530
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtca-taagc 219  Q
    |||||| ||||||||||| |||| ||| | ||||| |||||||||||| |||||||| |||   |||||||||||||||||| ||||||||||| ||||     
T  25930646 attaaaatgtttttgtatatgctttaaattgttttcataagctatcttggagaacttgtgatagtaagctgaaaaaagcttacgaaaagtgtcattaaga 25930547  T
Q  220 tgttttcataagttctc 236  Q
    | |||||||||||||||    
T  25930546 ttttttcataagttctc 25930530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 12976223 - 12976304
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||| |||||| ||| | |||||||| |||||||||||    
T  12976223 ttttataagctatattagagaacttatgaaat-aagctgaaaaaagcttttgaaaattgttagaagctgttctcataagttct 12976304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 8146362 - 8146422
Alignment:
Q  176 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||| |||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  8146362 ttatgaaattaagctggaaaaaacttatgaaaagtgtcataaactgttttcataagttctc 8146422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 31716283 - 31716204
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| ||||| ||||  |  |||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  31716283 ataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctc 31716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 35534702 - 35534590
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  |||| || ||||| ||||| ||| || |||||||||||||  ||||| ||||||||||| | |||| ||||||||||||    
T  35534702 ttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctg 35534605  T
Q  222 ttttcataagttctc 236  Q
    |||||| ||||||||    
T  35534604 ttttcacaagttctc 35534590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 10120783 - 10120849
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||  ||||||||||| ||| ||||| || |||||||||||||||||||||||||||    
T  10120783 gagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctc 10120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 29205787 - 29205900
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||||||  |||| |||| |||| || ||||| |||||||  || | | ||||||||||||||||| ||||||| ||||    
T  29205787 ttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaagtaggtt-aaaaaagcttatgaaaaatgtcatacgctg 29205885  T
Q  222 ttttcataagttctc 236  Q
    |||| ||||||||||    
T  29205886 ttttaataagttctc 29205900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 30251540 - 30251431
Alignment:
Q  128 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 226  Q
    ||||| |||||| || ||||||  ||||| |||||||||||| ||  |||||||||  ||||||| |||||||||||||||| ||  |||||||||||||    
T  30251540 ttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttc 30251441  T
Q  227 ataagttctc 236  Q
     |||||||||    
T  30251440 gtaagttctc 30251431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 35749626 - 35749547
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| ||||||||||||  || | ||||||||| ||||||||| ||  | |||||||||||||||||||||    
T  35749626 ataagctatcttaaagaacttatgaaaatatgttgaaaaaagtttatgaaaaatgctacaagctgttttcataagttctc 35749547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 16825628 - 16825515
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||| |  | ||||||| |||| || ||||||| ||   |||||||||||  |||| ||||||| ||||||||||| |||||||||||     
T  16825628 ttaaattgtttttgtttacgttataagttgtttctacaagctatattgccgaacttatgaaaataagttgaaaaa-gcttatgaaaattgtcataagcta 16825530  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  16825529 ttttcataagttctc 16825515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 43045783 - 43045697
Alignment:
Q  155 ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    |||||| |||| || |||||||||||||  |||| |||||||||||||| |||| |||  ||||||||||||||||| |||| ||||    
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaa 43045697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 37945576 - 37945689
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    |||||||  |||||||| |||||||  || ||||||||||||| ||  | ||||| ||||  |||| | ||||| ||||||| ||| |||||||||||||    
T  37945576 ttaaattaattttgtatatgctatagttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctgt 37945675  T
Q  223 tttcataagttctc 236  Q
    ||||| ||||||||    
T  37945676 tttcagaagttctc 37945689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 6881908 - 6882020
Alignment:
Q  125 aaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagc-tgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| ||| |||||||||  |||||||||||||  || |||||||||||||  |||||   |||||||||| | |||| | |||| |||||||    
T  6881908 aaattgtttttatatatgctataagctgttttataagctaaattggagaacttatgaaaataagcaaaaaaaaagcttgttaaaattatcatgagctgtt 6882007  T
Q  224 ttcataagttctc 236  Q
    |||||| ||||||    
T  6882008 ttcataggttctc 6882020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 28763417 - 28763461
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  28763417 aaaaaagcttatgaaaattgttataagctgttttcataagttctc 28763461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 29168146 - 29168034
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||| ||||||||| |||||||||  |||||  | ||||||||| ||||||||||| |  |||||||| |||   ||||||||| |||||||| |||||    
T  29168146 aaattatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaacatttatgaaaaatgtcataatctgtt 29168047  T
Q  224 ttcataagttctc 236  Q
    || ||||||||||    
T  29168046 tttataagttctc 29168034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 1930049 - 1930128
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| | || ||| ||||  ||||||||||| |||||||||| | |||||||| ||||||||| ||||||||    
T  1930049 ataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctc 1930128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 10114471 - 10114582
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||| ||||  ||||||||  ||||| || |||||| || |||||| ||||||  ||||||||||| ||| ||||| || ||| ||||| |||||    
T  10114471 aattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatgataaatgttataagttgttt 10114570  T
Q  225 tcataagttctc 236  Q
    ||||||||||||    
T  10114571 tcataagttctc 10114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 16347200 - 16347279
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtca-taagctgttttcataag 231  Q
    |||||||| |||||||   ||||||||||  |||||||||| |||||||||||||||||||| |||  ||||||||||||    
T  16347200 ttttataaactatcttgttgaacttatgatattaagctgaataaagcttatgaaaagtgtcattaacttgttttcataag 16347279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 35644031 - 35643968
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||| ||||||||  |||| ||||||||||||||||||| |||||||| || ||||||||||||    
T  35644031 gagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagtt 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 2458622 - 2458537
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaaga 243  Q
    |||||||||| |||||| |||||| |  ||| ||||||| |||||||||| | || |||||||||| ||||||||||||| ||||||    
T  2458622 ataagctatcctagagagcttatggaaataaactgaaaacagcttatgaaca-tgccataagctgtcttcataagttctccaaaaga 2458537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 42893533 - 42893467
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||  ||||||||||||||||||| ||  |  |||||||||||||| ||||||||||    
T  42893533 gagaacttatgaaaataagctgaaaaaagcttattaagcgcatcataagctgtttttataagttctc 42893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 1058126 - 1058054
Alignment:
Q  163 tatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| |||||||||||||  ||||| ||||||| || ||||||| |||||||||| ||||||| ||||||||    
T  1058126 tatcttggagaacttatgaaaataagcggaaaaaa-ctaatgaaaaatgtcataagcagttttcaaaagttctc 1058054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 9956884 - 9956791
Alignment:
Q  144 tataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||| ||||| |||| ||||||| |||||||||||||  |||||||||||   |||||||| | || ||||| || |||||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagttctc 9956791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 10383927 - 10383975
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 234  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  10383927 taagctgtaaacagcttatgaaaa-tgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 13459677 - 13459737
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||  || |||||||| || ||||||||| |||||||||||||||||||||||||||    
T  13459677 cttatgaaaataggctgaaaacagtttatgaaaa-tgtcataagctgttttcataagttctc 13459737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 13958156 - 13958061
Alignment:
Q  141 tgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||  ||||| ||||| ||||| ||| || |||||||| ||| ||| |||||||||||||||| ||||||||  |||||||| ||||||||    
T  13958156 tgctataagctgttttcataagttatctcagaaaaattatgaatataaactggaaaaagcttatgaaaa-tgtcataatttgttttcaaaagttctc 13958061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 32841014 - 32840963
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| | |||||||| | ||||||||| |||||||||||||||||    
T  32841014 taagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctc 32840963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 33808313 - 33808396
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| |||||||||| |  |||||||||||  |||||| |||| | |||||||| | | ||||||||| |||||||||||||||    
T  33808313 ttttgtaagctatctcaatgaacttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctc 33808396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 42043436 - 42043377
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatga 181  Q
    |||||||||||||| || || ||||||| ||||| |||||||||||||||||||| ||||    
T  42043436 ttaaattgtttttggatatgatataagttgttttcataagctatcttagagaactaatga 42043377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 43504761 - 43504843
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||||| ||||||||||| |  ||||||||||| ||||||| |||   ||| |||| ||||||||| |||||||    
T  43504761 ttttataagctatcttggagaacttatggaaataagctgaaaacagcttat-aaacaagtcgtaagttgttttcatcagttctc 43504843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 3254267 - 3254316
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | ||||||||||||||||| ||||||||    
T  3254267 taagctgaaaacagcttatgaaca-tgtcataagctgttttcttaagttct 3254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 11861791 - 11861869
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    ||||||||| |||||||||| ||||| |||||||||  |||||||||||||||  || | | |||||||||| ||||||    
T  11861791 tttttgtatatgctataagttgtttttataagctataatagagaacttatgaaaatacgttaaaaaaagcttttgaaaa 11861869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 12782257 - 12782163
Alignment:
Q  142 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||| ||||| ||||| |||||||||  | |||||||  | ||||||||| |||||||||| | |||||||  || ||||||||||||||    
T  12782257 gctataagttgttttcataagatatcttagatcatttatgaaacttagctgaaaagagcttatgaacaatgtcatagcctattttcataagttct 12782163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 20672760 - 20672825
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagc 219  Q
    |||||||||||||| | |||| ||||||||  ||||||||||| |||||||||| | ||||||||||    
T  20672760 ttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaaca-tgtcataagc 20672825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 37353340 - 37353243
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttat-aagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||||| | |||||||||  ||||| | |||||||||| |||| ||||||||  ||| ||||||| || ||||||| | |||||||||||    
T  37353340 ttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaata-tgtcataagct 37353243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 31751595 - 31751546
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||  ||||||||||| |||||||||| | |||||||||||||||    
T  31751595 cttatgaaaataagctgaaaatagcttatgaacaatgtcataagctgttt 31751546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 40859796 - 40859763
Alignment:
Q  199 cttatgaaaagtgtcataagctgttttcataagt 232  Q
    |||||||||| |||||||||||||||||||||||    
T  40859796 cttatgaaaattgtcataagctgttttcataagt 40859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 3537002 - 3536934
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||| |||||| ||||||||||| |  ||||||||||| |  ||||||| | |||||||||||||||    
T  3537002 tataagatatcttggagaacttatggaaataagctgaaaacaatttatgaacaatgtcataagctgttt 3536934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 30389113 - 30389184
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||| || |||||||||||||||  ||||||||||| | |||||||| | |||||| |||| ||||||||    
T  30389113 ataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaaca-tgtcattagctattttcata 30389184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 43717993 - 43717945
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatga 205  Q
    |||||||||||| |||||||||||||  |||||| |||| |||||||||    
T  43717993 ataagctatcttggagaacttatgaaagtaagctaaaaacagcttatga 43717945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 49938734 - 49938840
Alignment:
Q  131 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  |||| |||||||||||| |||||| ||||||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  230 agttctc 236  Q
    |||||||    
T  49938834 agttctc 49938840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 15477578 - 15477658
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15477578 tataagttatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttctc 15477658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 3234106 - 3233992
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||||||||  ||||  ||||||| |||||||||| ||| ||||| ||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  3234006 ttttcataagttctc 3233992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 17603475 - 17603361
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||| ||||  |||| || |||||| ||||||||| ||||||||||||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T
Q  222 ttttcataagttctc 236  Q
    ||||| |||||||||    
T  17603375 ttttcgtaagttctc 17603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 230
Target Start/End: Complemental strand, 24915142 - 24915034
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| |||| |||||||| ||||  |||| ||||||||||||||||||| ||||||||| ||    
T  24915142 ttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttg 24915043  T
Q  222 ttttcataa 230  Q
    |||||||||    
T  24915042 ttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 14576744 - 14576634
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |||||||| |  |||| ||||||||| ||||||||||| ||||  ||||||||||||||||| |||||| ||||||||||||    
T  14576744 ttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctg 14576646  T
Q  222 ttttcataagtt 233  Q
    |||||| |||||    
T  14576645 ttttcacaagtt 14576634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 30286611 - 30286499
Alignment:
Q  123 ttaaattgtttttgtat-ttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||| ||  |||||| |  || || || ||||||||||||||||||| |||||||||||    
T  30286611 ttaaattgtttttgtatgttgctataagttgtttttataagctattttgaagaactaagaaaatttagttgaaaaaagcttatgaaaattgtcataagct 30286512  T
Q  221 gttttcataagtt 233  Q
    |||||||||||||    
T  30286511 gttttcataagtt 30286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 37631649 - 37631539
Alignment:
Q  124 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 222  Q
    |||||||||||||| | || ||| || || |||| |||||||| || |||||||||||||  ||||||||||||||||| |||||| ||||| |||||||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgt 37631550  T
Q  223 tttcataagtt 233  Q
    |||||||||||    
T  37631549 tttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 13809977 - 13810098
Alignment:
Q  123 ttaaattgtttttgtatttgctata-agtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| ||||||| | || |||||||| |||| ||||||||||| ||||  |||||| | |||| ||| |||||| |||||||| |||    
T  13809977 ttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtcataaactg 13810076  T
Q  222 ttttcataagttctcgaaaaga 243  Q
    | ||||||||||||| ||||||    
T  13810077 tattcataagttctctaaaaga 13810098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 27976574 - 27976694
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaactt---------atgaatttaagctgaaaaaagcttatgaaaagtgt 212  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||||         |||||  |||||||||||||||||||||||| |||    
T  27976574 ttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaacttaatgaaataatgaaaataagctgaaaaaagcttatgaaaaatgt 27976673  T
Q  213 cataagctgttttcataagtt 233  Q
    |||||||| |||||| |||||    
T  27976674 cataagctattttcaaaagtt 27976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 2295106 - 2295189
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| | ||||||||| ||||  |||| |||| | |||||||||||| |||||||||||||||||||||||||||    
T  2295106 ttttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctc 2295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 473143 - 473256
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| || | |||||||||| ||||| ||||| | | || |||||||||||||  |||| ||||||||||||||||||| ||| |||||||     
T  473143 ttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgt-ataagctt 473241  T
Q  222 ttttcataagttctc 236  Q
    |||||||||||||||    
T  473242 ttttcataagttctc 473256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 37473418 - 37473496
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||| |||||| |||||||||||||  ||||||| |||||||||||||||| ||||||||| |||||||| ||||||||    
T  37473418 taagttatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctc 37473496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 51688685 - 51688782
Alignment:
Q  124 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||||||  |||||||||| |||||  ||||||||| | |||| |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  51688685 taaattgtttttgtacatgctataagttgttttcgtaagctatcgtggaga-cttatgaaattaagctgaaaaaaacttctgaaaagtgtcataagctg 51688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 27970387 - 27970271
Alignment:
Q  122 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagag-aacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagc 219  Q
    |||||||||||||||||| |||||||||| ||||  |||| |||| || | | ||||||||||  ||| |||||||||||||||||||| |||||||| |    
T  27970387 attaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataaac 27970288  T
Q  220 tgttttcataagttctc 236  Q
     ||||| ||||||||||    
T  27970287 cgtttttataagttctc 27970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 51929628 - 51929524
Alignment:
Q  125 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||| ||| |||  |||| || |||||||| |||| || ||||||||||| |  |||| ||||||||||||||||||| ||||||||||||||    
T  51929628 aaattgtttttatatatgccttaagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 51929529  T
Q  224 ttcat 228  Q
    |||||    
T  51929528 ttcat 51929524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 6556950 - 6557065
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagc-ttatgaaaagtgtcataagct 220  Q
    ||||||||||||||||| || ||||||| ||||| ||||| ||| ||| |||||||||||   |||||| |||||| | || |||||| |||||||||||    
T  6556950 ttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataagct 6557049  T
Q  221 gttttcataagttctc 236  Q
     |||||||||||||||    
T  6557050 attttcataagttctc 6557065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 29904761 - 29904844
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| |||| ||| ||||||||||||  |||| |||||||||||| |||||| || ||||||||||||| ||||||||||    
T  29904761 ttttataaactatattatagaacttatgaaaataaggtgaaaaaagcttttgaaaattgccataagctgtttttataagttctc 29904844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 38503518 - 38503441
Alignment:
Q  160 agctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcg 237  Q
    ||||||||| |||||||||||||  ||||||||||| | |||||||| | ||||||| ||||||| ||||||||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttctcg 38503441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 41184741 - 41184628
Alignment:
Q  123 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| |  ||||| | |||||||||  | || || || ||||||||||  |||| |||||||| |||||||||| |||||||||||     
T  41184741 ttaaattgtttttgtatatattataatttggttttatataccatattggaaaacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagcta 41184642  T
Q  222 ttttcataagttct 235  Q
    ||||||||||||||    
T  41184641 ttttcataagttct 41184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 5720935 - 5721018
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaag-cttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| ||||||||| ||||||  | |||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  5720935 ttttataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaat-tgtcataagctgttttcataagttctc 5721018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 5741616 - 5741699
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaa-gcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| ||||||||||||||||  | |||||||||||  |||||| ||| ||||||||| |||||||||||||||||    
T  5741616 ttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatg-aaattgtcataagttgttttcataagttctc 5741699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 40977487 - 40977380
Alignment:
Q  131 tttttgtatttgctataag--tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 228  Q
    ||||||||| |||||||||  |  |||||||||| || | ||||||| ||||||  ||||||| ||||||||| |||||| ||||||||  |||||||||    
T  40977487 tttttgtatatgctataaggttaattttataagccatataagagaacatatgaaaataagctggaaaaagcttttgaaaattgtcataaattgttttcat 40977388  T
Q  229 aagttctc 236  Q
    ||||||||    
T  40977387 aagttctc 40977380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 42174841 - 42174933
Alignment:
Q  130 gtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||| |||||||||| ||||| ||||| ||| || |||||||||||||  |||| | |||| |||||||||||| ||||||||||||    
T  42174841 gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 7137054 - 7136977
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||| |||||||||||||  ||||||||||| | |||||||| | ||||||||||  ||||||||||||||    
T  7137054 ataagctatcttggagaacttatgaaaataagctgaaaataacttatgaata-tgtcataagcgattttcataagttct 7136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 41195284 - 41195187
Alignment:
Q  123 ttaaattgtttttgtatttgctat-aagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    ||||| ||||||||||| | |||| || || ||| |||| ||||||| |||||||||||||  ||||||||||||||||||| |||| |||||||||||    
T  41195284 ttaaactgtttttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaa-tgtcataagct 41195187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 27820253 - 27820169
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    |||||||||||||| |||| |||||||  ||||||||||| |||||||||| | ||| ||||||| ||||||||| ||||| ||||    
T  27820253 tataagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaa 27820169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 27820427 - 27820330
Alignment:
Q  124 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagct 220  Q
    |||||||||| |||||  |||||| | || |||||||||||||||| ||||| |||||||  ||||||||||| |||||||||| | |||| ||||||    
T  27820427 taaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 47432075 - 47432160
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    |||||||||||||| || |||||||||  |||||||||| ||| ||  |||| |||||||  ||||||||||||||||| ||||||    
T  47432075 ttaaattgtttttgaatatgctataaggtgttttataagttatattgaagaatttatgaaaataagctgaaaaaagcttgtgaaaa 47432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 10199464 - 10199386
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||| ||||||| ||||||||  ||||||||||| | |||||||| | ||||||||||| ||||||| |||||||    
T  10199464 ataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca-tgtcataagctattttcatgagttctc 10199386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 10744315 - 10744393
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||| ||||||||||||||| ||  |||| |||||| |||||||||| | || ||||||||||||||| ||||||||    
T  10744315 ataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaaca-tgccataagctgttttcacaagttctc 10744393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 45975704 - 45975783
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| ||||| |||||||  ||||||||||| |||||||||| | ||| |||  ||||||||||| ||||||    
T  45975704 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttctc 45975783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 3887692 - 3887610
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||| |||||| ||  |||||||||||||  |||| | |||| |||||||||| | ||||||||| ||||||||||||||||    
T  3887692 ttttacaagctagctaggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttct 3887610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 10280664 - 10280741
Alignment:
Q  158 taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||  ||||||||||||  |||||||| ||||||||||||| | ||  ||||| |||||||||||||||||    
T  10280664 taagctatcttcaagaacttatgaaaataagctgacaaaagcttatgaaca-tgaaataagttgttttcataagttctc 10280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 36872299 - 36872357
Alignment:
Q  177 tatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||| ||||| ||||||||||||||||||| | | ||||||||||||||||| ||||    
T  36872299 tatgaaattaagttgaaaaaagcttatgaaaattataataagctgttttcataaattct 36872357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 37842427 - 37842334
Alignment:
Q  142 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||| ||||| ||||||||||||  ||||||||| ||  |||||||||||  ||||||||| | |||||| || ||||||||||||||||    
T  37842427 gctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaaca-tgtcattagatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 51695551 - 51695473
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||| ||||| |||||||  ||||||||||| |||||||||| | ||| ||||| |||||  |||||||||    
T  51695551 ataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttct 51695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 33186318 - 33186399
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatg-aaaagtgtcataagctgttttcataagttctc 236  Q
    ||||| |||| |||||||||||||  |  ||||||||||||||||| || |||| |||||||| | ||||||||||||||||    
T  33186318 tataatctatattagagaacttatataaataagctgaaaaaagcttttgaaaaattgtcataaccagttttcataagttctc 33186399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 34290224 - 34290328
Alignment:
Q  132 ttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||  ||||||||  ||||| ||||||||||||  ||||||||||||  ||||||||||| | |||||||| | ||||||||||| |||| ||||    
T  34290224 ttttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaata-tgtcataagcttttttaataa 34290322  T
Q  231 gttctc 236  Q
     |||||    
T  34290323 attctc 34290328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 37517189 - 37517144
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||    
T  37517189 tgaaaaaagcttttgaaaattgtcataagctgttttcgtaagttct 37517144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 43230843 - 43230749
Alignment:
Q  141 tgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| ||| ||||| ||||| || ||||||| |||||  |||| |||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  43230843 tgctataagttgttcttataggctatattggagaactaatgaaaataagttgaaaaaagcttataaaaactgtc--aagctgttttcataaattctc 43230749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 14331970 - 14332072
Alignment:
Q  131 tttttgtatttgctataagtggttttataa-gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcata 229  Q
    ||||||||| |||||||||| ||||   || |||||||| ||| |||| |||| ||||||||||||||||| | |||| |||||||||  ||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaaaaaagctaacgaaa-gtgtcataatttgttttcata 14332067  T
Q  230 agttc 234  Q
    |||||    
T  14332068 agttc 14332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 36872458 - 36872518
Alignment:
Q  175 cttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||| |||| | ||||||||||||||||| | ||||||||||| ||||||| ||||    
T  36872458 cttatgaatataagttaaaaaaagcttatgaaaattttcataagctgtattcataaattct 36872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 36872716 - 36872826
Alignment:
Q  128 ttgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttc 226  Q
    |||||||||||| ||||||||| || ||||| ||||||| ||  ||||||||||||  |||| || ||||||||||| |||| ||||||||   ||||||    
T  36872716 ttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttg-aaaaagcttatcaaaattgtcataa---gttttc 36872811  T
Q  227 ataagttctcgaaaa 241  Q
    |||| ||||| ||||    
T  36872812 ataaattctccaaaa 36872826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 1510398 - 1510315
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    ||||||||||||||  | ||||||| ||||| ||||||| | || ||||||||| |||  |||| |||||||||||||||||||    
T  1510398 aattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaaaaaagcttatgaaaa 1510315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 2777874 - 2777984
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||| |||||||  ||||||||  |||||| |||| || ||| |||||||||||||  |||||||||||  ||||||||| |  |||||||| || ||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaata-cgtcataagttggtt 2777972  T
Q  225 tcataagttctc 236  Q
    ||||||||||||    
T  2777973 tcataagttctc 2777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 12287279 - 12287169
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag-ctgttt 224  Q
    ||||||||||||| |||||||||| |||||  ||||||||||||  |||||||  ||  ||||||||||| | |||||||||| || |||||| || |||    
T  12287279 attgtttttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaaaa-tgccataagactattt 12287181  T
Q  225 tcataagttctc 236  Q
    ||| ||||||||    
T  12287180 tcacaagttctc 12287169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 39596578 - 39596633
Alignment:
Q  125 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttat 179  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||| |||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggagagcttat 39596633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 44217194 - 44217151
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||    
T  44217194 tgaaaaaagcttataaaaattgtgataagctgttttcataagtt 44217151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 49888749 - 49888824
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagct 200  Q
    ||||||||| ||||  ||||| ||| ||||| ||||||||||||||||||||||||||  ||||| ||||| ||||    
T  49888749 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 49888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 7941620 - 7941698
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||| |  |||||||||||||  |||| |||||| |||||  ||| | ||||||||||||||||||||| ||||    
T  7941620 ataagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattct 7941698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 25479579 - 25479668
Alignment:
Q  142 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataag 231  Q
    ||||||||| ||||| |||||||||| |||||| ||||||||  ||||||||||| | || ||||| | |||||||| || ||||||||||    
T  25479579 gctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaaca-tgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 38001639 - 38001688
Alignment:
Q  186 aagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| | |||||||| || ||||||||||||||||||||||||||    
T  38001639 aagctgaaaacaacttatgaacag-gtcataagctgttttcataagttctc 38001688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 1509734 - 1509843
Alignment:
Q  127 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtttt 225  Q
    ||||||||||||| ||  |||||| ||||| ||||||| | || |||||||| || |  |||| |||||||||||||||| || |  ||||||||||||     
T  1509734 attgtttttgtatatgtaataagttgtttttataagctctgttggagaacttgtgtaaataagttgaaaaaagcttatgagaatttccataagctgtttc 1509833  T
Q  226 cataagttct 235  Q
    || |||||||    
T  1509834 caaaagttct 1509843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 28689509 - 28689425
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaa 241  Q
    ||||||||||||| || | ||||||||  ||||||||||| | |||||| | | ||||||||||||||| | ||||||||| ||||    
T  28689509 tataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggaca-tgtcataagctgtttccgtaagttctctaaaa 28689425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 35925732 - 35925780
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttc 234  Q
    |||| |||||| |||||||||| | |||||||||||||||||||||||||    
T  35925732 taagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 341494 - 341534
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    |||||||| |||||||||| ||||||||| |||||||||||    
T  341494 tgaaaaaaacttatgaaaattgtcataagttgttttcataa 341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 15784336 - 15784404
Alignment:
Q  150 tggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataag 218  Q
    ||||||||||||||||||| |||||||| ||||  |||||| |||| | ||| |||| | |||||||||    
T  15784336 tggttttataagctatcttggagaacttgtgaaaataagctaaaaacaacttgtgaacaatgtcataag 15784404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 27145777 - 27145714
Alignment:
Q  171 agaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||||  ||||||||||||| |||||||| | |||||||||  |||||| ||||||||    
T  27145777 agaacttatgaaaataagctgaaaaaa-cttatgaacaatgtcataagtcgttttcttaagttct 27145714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 30581781 - 30581861
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttat 203  Q
    ||||||||||||| ||| ||||||||||  |||||||||| || || | || ||||||||  |||| |||||| |||||||    
T  30581781 ttaaattgtttttttatatgctataagtttttttataagccatatttgggagcttatgaaaataagttgaaaacagcttat 30581861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 41505745 - 41505777
Alignment:
Q  204 gaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||| |||||||||||||||||||||||||||    
T  41505745 gaaaattgtcataagctgttttcataagttctc 41505777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 42575492 - 42575452
Alignment:
Q  190 tgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  42575492 tgaaaaaagcttatgaaaactgtcataagttgtttttataa 42575452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 3e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 34430550 - 34430447
Alignment:
Q  125 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgtt 223  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||| ||||| |||||||  ||||||||||||||||||||| || ||||||||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtt 34430451  T
Q  224 ttca 227  Q
    ||||    
T  34430450 ttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 9763574 - 9763644
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttca 227  Q
    ||||||||| ||  |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  9763574 ataagctatattgtagaacttatgaaattaagttgaaaaaagcttatcaaaagtgtcataagctgttttca 9763644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 20368268 - 20368158
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    ||||||||||||||  | ||||||| ||||| ||||||| |||| |||||||||||||  |||| |||||  |||||||||| | ||||||||| |||||    
T  20368268 aattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaaca-tgtcataagttgttt 20368170  T
Q  225 tcataagttctc 236  Q
    ||||||||||||    
T  20368169 tcataagttctc 20368158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 9093647 - 9093533
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    |||||||||||| ||||  ||||||||  ||||| ||||||| |||||||||||||| |||  ||||||||||| || |||| || | |||||||||||     
T  9093647 ttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagcta 9093548  T
Q  222 ttttcataagttctc 236  Q
    |||||||||| ||||    
T  9093547 ttttcataagctctc 9093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 35070708 - 35070627
Alignment:
Q  155 ttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||| || |||||||||||||   ||||  |||||||||| |||||| ||||||||||||||||| |||||||||    
T  35070708 ttataagctattttggagaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagttctc 35070627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 2735048 - 2735159
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||| |||||||||   |||||||  ||||| |||||| |||||  | ||||||||||  ||||| ||||| |||||||||||| |||||||||| |    
T  2735048 ttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccg 2735147  T
Q  222 ttttcataagtt 233  Q
    ||||||||||||    
T  2735148 ttttcataagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 6536597 - 6536680
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaa 208  Q
    |||||||||||||| |||||||||| ||||| | ||||||| || ||||| |||||||  |||| |||||||||||||||||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaa 6536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 35099019 - 35099129
Alignment:
Q  126 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttt 224  Q
    |||||||||||||| || ||||||| ||||| |||||||||||||||| | || ||||  |||| |||||||| |||| ||||| |||||| ||||||||    
T  35099019 aattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaaaa-cttacgaaaaatgtcattagctgttt 35099117  T
Q  225 tcataagttctc 236  Q
    || ||| |||||    
T  35099118 tcctaaattctc 35099129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 9912234 - 9912168
Alignment:
Q  170 gagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||||  |||||| |||| |||||||||| | |||||||||||| ||||||||||||||    
T  9912234 gagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctc 9912168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 31624108 - 31624181
Alignment:
Q  161 gctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||| ||||| |||||||  |||| |||||| |||||||||| | ||||||||||||||||||||||||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 18076175 - 18076295
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatctt--aga-----gaacttatgaatttaagctgaaaaaagcttatgaaaagtgtca 214  Q
    ||||||||||||| || ||||||||||| ||||| ||||||||| ||  |||     |||||||||||| |||| |||||| |||| ||||||| |||||    
T  18076175 ttaaattgtttttctaattgctataagttgtttttataagctatattgaagaactaagaacttatgaatataagttgaaaacagctcatgaaaattgtca 18076274  T
Q  215 taagctgttttcataagttct 235  Q
    ||||||| |||||||| ||||    
T  18076275 taagctggtttcataaattct 18076295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 848022 - 848081
Alignment:
Q  176 ttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    |||||||  |||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttct 848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 6909963 - 6909892
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaa 193  Q
    ||||||||||||||||| |||||||||| ||||| ||||  |||||| ||||| ||||||| ||||||||||    
T  6909963 ttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 31813175 - 31813254
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||||| |||||| ||||||  |||||||||||  ||||||||| | | ||||||||  |||||||||||||||    
T  31813175 ataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctc 31813254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 24626274 - 24626377
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctg 221  Q
    ||||||||||||||||| | |||||||| ||||| |||||||||||| ||| | |||        |||||||||||| ||||||| || |||||||||||    
T  24626274 ttaaattgtttttgtatattctataagttgttttcataagctatcttggagtaatta--------agctgaaaaaagtttatgaagagcgtcataagctg 24626365  T
Q  222 ttttcataagtt 233  Q
    |||||| |||||    
T  24626366 ttttcaaaagtt 24626377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 30641758 - 30641838
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||||||||||| |||| ||||||||| |||   | ||| |||||||||||| |||  ||| ||||||||||||||||||    
T  30641758 tataagctatcttggagagcttatgaatataattaggaaacagcttatgaaaaatgttgtaaactgttttcataagttctc 30641838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 19411577 - 19411526
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    ||||| ||||||||||||||| || ||||||||||||||| || ||||||||    
T  19411577 taagccgaaaaaagcttatgagaactgtcataagctgtttacaaaagttctc 19411526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 24982696 - 24982803
Alignment:
Q  135 tgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||| |||||||||  ||||| ||||| ||| || ||||||||||||   |||||| ||||||||| || |||| |||||||||||||| ||| | |||    
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  234 ctcgaaaa 241  Q
    ||| ||||    
T  24982796 ctccaaaa 24982803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 696644 - 696693
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||    
T  696644 taagctgaaaacagcttatgaaca-tgtcataagctgttttgataagttct 696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 13907584 - 13907678
Alignment:
Q  143 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||| ||||| |||||| ||||| ||||| |||||||  ||| ||||||| | ||| |||| | ||||| ||||||||||||||| |||||    
T  13907584 ctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaattctc 13907678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 837307 - 837234
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 195  Q
    |||||||||||| || |  ||||||||| ||||| || ||||||||| |||||||||||||  |||||||||||    
T  837307 ttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 2027434 - 2027390
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||    
T  2027434 taagctgaaaacagcttatggaaa-tgtcataagctgttttcataa 2027390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 12628355 - 12628425
Alignment:
Q  156 tataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcat 228  Q
    |||||||||| || |||||||||||||  |||| |||||| |||| ||||||  ||||| |||||||||||||    
T  12628355 tataagctattttggagaacttatgaaagtaagttgaaaacagctaatgaaa--tgtcagaagctgttttcat 12628425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 18611102 - 18611163
Alignment:
Q  173 aacttatgaatttaagctga-aaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||||||| ||||| ||| |||||||| | ||||||||| ||||| ||||||||||||||    
T  18611102 aacttatgaaattaagttgagaaaaagctgaggaaaagtgttataagttgttttcataagtt 18611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 30926578 - 30926611
Alignment:
Q  202 atgaaaagtgtcataagctgttttcataagttct 235  Q
    ||||||| ||||||||||||||||||||||||||    
T  30926578 atgaaaattgtcataagctgttttcataagttct 30926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 161012 - 160968
Alignment:
Q  153 ttttataagctatcttagagaacttatgaatttaagctgaaaaaa 197  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||    
T  161012 ttttgtaagctatattagagaacttatgaaaataagctgaaaaaa 160968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 415283 - 415367
Alignment:
Q  123 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 206  Q
    |||||||||||| ||||  ||||||||| ||||| |||||||||  | ||||||||||| | | |||||||||| || |||||||    
T  415283 ttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 415367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 696484 - 696531
Alignment:
Q  185 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    |||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  696484 taagctaaaaacagcttatgaaca-tgtcataagctgttttcataagtt 696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 31623599 - 31623643
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagttctc 236  Q
    |||||||||| |||||| ||||||||||| |||||| ||||||||    
T  31623599 aaaaaagcttgtgaaaattgtcataagctattttcagaagttctc 31623643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 58756 - 58829
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataa 230  Q
    ||||||||| ||  |||||||||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||    
T  58756 ataagctatgttgaagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataaactgctttcataa 58829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 22245 - 22321
Alignment:
Q  157 ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||| || || ||||||||||  |||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  22245 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagtt 22321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 1003 - 962
Alignment:
Q  192 aaaaaagcttatgaaaagtgtcataagctgttttcataagtt 233  Q
    ||||||||||||||||| ||||||||||| |||| |||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University