View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7523_low_48 (Length: 252)

Name: NF7523_low_48
Description: NF7523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7523_low_48
NF7523_low_48
[»] chr4 (21 HSPs)
chr4 (89-238)||(42662335-42662484)
chr4 (94-143)||(35645833-35645882)
chr4 (1-46)||(42662899-42662944)
chr4 (94-146)||(31254475-31254527)
chr4 (94-145)||(39902631-39902682)
chr4 (94-144)||(27634149-27634199)
chr4 (93-145)||(6778510-6778562)
chr4 (94-146)||(22231141-22231193)
chr4 (96-143)||(27634586-27634633)
chr4 (94-145)||(28245594-28245645)
chr4 (94-145)||(50543398-50543449)
chr4 (94-144)||(17111734-17111784)
chr4 (94-144)||(35788860-35788910)
chr4 (94-143)||(400633-400682)
chr4 (94-143)||(9279194-9279243)
chr4 (94-143)||(21684965-21685014)
chr4 (94-139)||(22827509-22827554)
chr4 (94-143)||(35788626-35788675)
chr4 (94-139)||(44118927-44118972)
chr4 (94-143)||(50543635-50543684)
chr4 (105-145)||(24974307-24974347)
[»] chr5 (20 HSPs)
chr5 (94-145)||(18333533-18333584)
chr5 (94-145)||(8081182-8081233)
chr5 (94-145)||(24269938-24269989)
chr5 (94-145)||(24346569-24346620)
chr5 (94-143)||(2063801-2063850)
chr5 (92-145)||(4481629-4481682)
chr5 (94-134)||(15480298-15480338)
chr5 (94-141)||(9368799-9368846)
chr5 (94-145)||(15590138-15590189)
chr5 (94-145)||(17150301-17150352)
chr5 (94-145)||(18885427-18885477)
chr5 (94-145)||(41666825-41666876)
chr5 (94-144)||(24647662-24647712)
chr5 (94-139)||(1564635-1564680)
chr5 (96-145)||(6919264-6919313)
chr5 (94-143)||(24346805-24346854)
chr5 (94-143)||(37656582-37656631)
chr5 (94-143)||(41667061-41667110)
chr5 (94-134)||(30758367-30758407)
chr5 (94-130)||(38976913-38976949)
[»] chr2 (21 HSPs)
chr2 (94-145)||(16419467-16419518)
chr2 (89-145)||(33606117-33606173)
chr2 (94-145)||(37812336-37812387)
chr2 (92-143)||(42639680-42639731)
chr2 (94-143)||(12343818-12343867)
chr2 (94-143)||(17719367-17719416)
chr2 (94-143)||(21591748-21591797)
chr2 (94-146)||(15124616-15124668)
chr2 (94-145)||(2324205-2324256)
chr2 (94-145)||(5711507-5711558)
chr2 (94-145)||(5711743-5711794)
chr2 (94-145)||(40379277-40379328)
chr2 (89-139)||(10523224-10523274)
chr2 (103-145)||(12343686-12343728)
chr2 (94-143)||(94088-94137)
chr2 (94-143)||(2029736-2029785)
chr2 (94-143)||(14466478-14466527)
chr2 (94-143)||(17525406-17525455)
chr2 (94-143)||(37840304-37840353)
chr2 (94-143)||(40379512-40379561)
chr2 (89-145)||(25082600-25082656)
[»] chr1 (34 HSPs)
chr1 (94-145)||(35772229-35772280)
chr1 (94-145)||(52961547-52961598)
chr1 (94-144)||(25713359-25713409)
chr1 (93-143)||(26603395-26603445)
chr1 (94-144)||(33156935-33156985)
chr1 (94-143)||(20208594-20208643)
chr1 (94-139)||(3477244-3477289)
chr1 (94-139)||(7826099-7826144)
chr1 (96-145)||(25145555-25145604)
chr1 (94-143)||(26173524-26173573)
chr1 (94-143)||(32952038-32952087)
chr1 (94-143)||(38080572-38080621)
chr1 (94-143)||(38733119-38733168)
chr1 (96-143)||(2859697-2859744)
chr1 (94-145)||(4112839-4112890)
chr1 (94-145)||(8870757-8870808)
chr1 (94-145)||(38668325-38668376)
chr1 (94-145)||(38733347-38733398)
chr1 (94-145)||(51459898-51459949)
chr1 (94-145)||(51460150-51460201)
chr1 (94-145)||(51589191-51589242)
chr1 (94-140)||(2859460-2859506)
chr1 (94-144)||(3169732-3169782)
chr1 (94-144)||(4098231-4098281)
chr1 (94-144)||(39348187-39348237)
chr1 (94-143)||(15986401-15986450)
chr1 (94-139)||(17468315-17468360)
chr1 (94-143)||(33156405-33156454)
chr1 (94-143)||(51588959-51589008)
chr1 (94-143)||(52650839-52650888)
chr1 (94-142)||(17412304-17412352)
chr1 (94-142)||(39808434-39808482)
chr1 (94-130)||(40524719-40524755)
chr1 (94-134)||(42819276-42819316)
[»] chr8 (23 HSPs)
chr8 (95-144)||(20094629-20094678)
chr8 (94-143)||(24532489-24532538)
chr8 (97-145)||(422288-422336)
chr8 (97-143)||(5590439-5590485)
chr8 (94-143)||(11232497-11232546)
chr8 (94-143)||(12317013-12317062)
chr8 (94-143)||(39052997-39053046)
chr8 (94-142)||(29099808-29099856)
chr8 (94-145)||(11232262-11232313)
chr8 (94-145)||(15042738-15042789)
chr8 (94-145)||(39052605-39052656)
chr8 (94-132)||(34236716-34236754)
chr8 (94-144)||(39960157-39960207)
chr8 (94-143)||(10449967-10450016)
chr8 (94-143)||(25325613-25325662)
chr8 (94-139)||(29907794-29907839)
chr8 (94-143)||(31197582-31197631)
chr8 (94-139)||(38447495-38447540)
chr8 (103-143)||(4873534-4873574)
chr8 (94-134)||(5932252-5932292)
chr8 (92-128)||(7289266-7289302)
chr8 (94-146)||(28069425-28069477)
chr8 (94-142)||(39984782-39984830)
[»] chr7 (25 HSPs)
chr7 (94-147)||(26239984-26240037)
chr7 (94-146)||(43688227-43688279)
chr7 (94-145)||(2404242-2404293)
chr7 (94-145)||(3519793-3519844)
chr7 (94-145)||(14540809-14540860)
chr7 (94-143)||(3038152-3038201)
chr7 (94-145)||(29469805-29469856)
chr7 (94-145)||(34027358-34027409)
chr7 (94-145)||(34124258-34124309)
chr7 (95-145)||(2315339-2315389)
chr7 (89-143)||(2404471-2404525)
chr7 (94-144)||(2544283-2544333)
chr7 (94-144)||(3392948-3392998)
chr7 (94-144)||(4267820-4267870)
chr7 (94-144)||(18826556-18826606)
chr7 (100-142)||(33834394-33834436)
chr7 (94-132)||(36993371-36993409)
chr7 (94-131)||(3520108-3520145)
chr7 (98-143)||(5522846-5522891)
chr7 (94-143)||(21861261-21861310)
chr7 (94-143)||(29469572-29469621)
chr7 (94-143)||(48243505-48243554)
chr7 (94-134)||(32278953-32278993)
chr7 (89-145)||(36993137-36993193)
chr7 (94-142)||(44874414-44874462)
[»] chr6 (21 HSPs)
chr6 (92-145)||(6542774-6542827)
chr6 (94-143)||(12330358-12330407)
chr6 (94-145)||(33494739-33494790)
chr6 (94-144)||(3680212-3680262)
chr6 (94-143)||(6543011-6543060)
chr6 (94-143)||(8567026-8567075)
chr6 (94-143)||(24554084-24554133)
chr6 (89-141)||(25065157-25065209)
chr6 (94-145)||(4868645-4868696)
chr6 (94-145)||(13353401-13353452)
chr6 (93-144)||(30505703-30505754)
chr6 (94-145)||(33796526-33796577)
chr6 (94-144)||(19639181-19639231)
chr6 (95-145)||(34345597-34345647)
chr6 (94-143)||(13353168-13353217)
chr6 (98-143)||(19648306-19648351)
chr6 (94-143)||(21214952-21215001)
chr6 (94-143)||(33796293-33796342)
chr6 (89-145)||(10145813-10145869)
chr6 (94-134)||(12330247-12330287)
chr6 (94-146)||(31961142-31961194)
[»] chr3 (19 HSPs)
chr3 (94-143)||(34992517-34992566)
chr3 (94-143)||(38791518-38791567)
chr3 (83-131)||(11659739-11659787)
chr3 (89-144)||(19954281-19954336)
chr3 (94-145)||(20327682-20327733)
chr3 (94-145)||(35038262-35038313)
chr3 (97-143)||(22729067-22729113)
chr3 (94-143)||(35038496-35038545)
chr3 (94-145)||(34992806-34992858)
chr3 (94-145)||(4155524-4155575)
chr3 (94-145)||(20303132-20303183)
chr3 (94-144)||(16239557-16239607)
chr3 (94-143)||(16927017-16927066)
chr3 (94-131)||(52994757-52994794)
chr3 (94-134)||(13741170-13741210)
chr3 (94-146)||(39620290-39620342)
chr3 (93-145)||(39683335-39683387)
chr3 (94-134)||(45138870-45138910)
chr3 (94-130)||(46794034-46794070)
[»] scaffold0129 (2 HSPs)
scaffold0129 (94-142)||(14506-14554)
scaffold0129 (94-133)||(14280-14319)
[»] scaffold0519 (2 HSPs)
scaffold0519 (94-143)||(1883-1932)
scaffold0519 (94-145)||(2116-2167)
[»] scaffold0729 (1 HSPs)
scaffold0729 (93-145)||(2694-2746)
[»] scaffold0005 (1 HSPs)
scaffold0005 (95-139)||(288726-288770)
[»] scaffold0001 (1 HSPs)
scaffold0001 (94-142)||(429841-429889)
[»] scaffold0766 (1 HSPs)
scaffold0766 (94-145)||(6239-6290)
[»] scaffold0060 (1 HSPs)
scaffold0060 (94-143)||(20542-20591)
[»] scaffold0692 (1 HSPs)
scaffold0692 (94-142)||(5822-5870)


Alignment Details
Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 42662484 - 42662335
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacatgcgagaatttcatcataaattgtcttttcatttgtgagagat 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42662484 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacatgcgagaattttatcataaattgtcttttcatttgtgagagat 42662385  T
Q  189 attagatttcctacactcttgcgttggtgcttgaccctgttgtgctttct 238  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  42662384 attagatttcctacactcttgcgttggtgcttggccctggtgtgctttct 42662335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 35645833 - 35645882
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  35645833 ttataaacacattgtcagaccatcacctattcgatgtgggactcttaaca 35645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42662944 - 42662899
Alignment:
Q  1 ttattttaaaaataatcacgtttaaaacttttcatcatttattaca 46  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  42662944 ttattttaaaaataattacgtttaaaacttttcatcatttattaca 42662899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 31254475 - 31254527
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    |||||||||||||||||| ||||| ||||| |||||||||| |||||||||||    
T  31254475 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaacacat 31254527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 39902631 - 39902682
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  39902631 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacaca 39902682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 27634149 - 27634199
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| |||| |||||| |||||||||| |||||||||    
T  27634149 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacac 27634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 6778510 - 6778562
Alignment:
Q  93 tttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||| | ||||||||||||| |||||| |||||||||| ||||||||||    
T  6778510 tttataaatatattgtcagaccatgtcctatccgatgtgggactcttaacaca 6778562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 22231141 - 22231193
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    |||||||||||||||||| |||| |||||| |||||| ||| |||||||||||    
T  22231141 ttataaacacattgtcaggccatatcctatccgatgtaggactcttaacacat 22231193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 27634586 - 27634633
Alignment:
Q  96 ataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||| |||| |||||| |||||||||| ||||||||    
T  27634586 ataaacacattgtcaggccatgtcctatccgatgtgggactcttaaca 27634633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 28245594 - 28245645
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||| ||||| ||||||| || ||||||||||    
T  28245594 ttataaacacattgtcaggccatcacctatccgatgtgagactcttaacaca 28245645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 50543398 - 50543449
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||| |||||||||||||||||| ||||| |||||||||  ||||||||||    
T  50543398 ttatacacacattgtcagaccatcacctatccgatgtggggctcttaacaca 50543449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 17111784 - 17111734
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| ||||| |||||  ||||||||| |||||||||    
T  17111784 ttataaacacattgtcaggccatcacctatctgatgtgggactcttaacac 17111734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 35788910 - 35788860
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| |||| | |||| |||||||||| |||||||||    
T  35788910 ttataaacacattgtcaggccatgttctatccgatgtgggactcttaacac 35788860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 400633 - 400682
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||||| |||  |||||| || ||||||||    
T  400633 ttataaacacattgtcagaccatctcatatctgatgtgagactcttaaca 400682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 9279243 - 9279194
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||| ||||| ||||||| || ||||||||    
T  9279243 ttataaacacattgtcaggccatcacctatccgatgtgcgactcttaaca 9279194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21685014 - 21684965
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||||| ||||||| || ||||||||    
T  21685014 ttataaacacattgtcaggccatgtcctatccgatgtgagactcttaaca 21684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 22827554 - 22827509
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||||||| ||||||| ||||||||||| |||||||||| ||||    
T  22827554 ttataaacacgttgtcaggccatctcctatccgatgtgggactctt 22827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 35788675 - 35788626
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| ||||||  ||||||||| ||||||||    
T  35788675 ttataaacacattgtcaggccatgtcctatctgatgtgggactcttaaca 35788626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 44118927 - 44118972
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||    
T  44118927 ttataaacacattgtcaggccatctcttatccgatgtgggactctt 44118972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 50543635 - 50543684
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||| |||||||||||| ||||| ||||| |||||||||| ||||||||    
T  50543635 ttatacacacattgtcaggccatcacctatccgatgtgggactcttaaca 50543684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 24974347 - 24974307
Alignment:
Q  105 ttgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||| ||| |||||||||| ||||||||||    
T  24974347 ttgtcagaccatctcatatccgatgtgggactcttaacaca 24974307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 18333533 - 18333584
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18333533 ttataaacacattgtcagaccatctcctatccgatgtgggattcttaacaca 18333584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 8081182 - 8081233
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  8081182 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacaca 8081233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 24269938 - 24269989
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  24269938 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacaca 24269989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 24346569 - 24346620
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  24346569 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacaca 24346620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 2063801 - 2063850
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| | |||| |||||||||| ||||||||    
T  2063801 ttataaacacattgtcagaccatgttctatccgatgtgggactcttaaca 2063850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 4481629 - 4481682
Alignment:
Q  92 atttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||| ||| || |||| |||||||||| ||||||||||    
T  4481629 atttataaacacattgtcaggccaacttctatccgatgtgggactcttaacaca 4481682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 15480338 - 15480298
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  15480338 ttataaacacattgtcagaccatcacctatccgatgtggga 15480298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 9368846 - 9368799
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaa 141  Q
    |||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  9368846 ttataaacacattgtcatgccatctcctatccgatgtgggactcttaa 9368799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 15590189 - 15590138
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||  ||||||||||||||||| ||||||||||| || ||||||||||    
T  15590189 ttataaatccattgtcagaccatctcatattcgatgtgagactcttaacaca 15590138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 17150301 - 17150352
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||| |||||||||||||||| |||||| | | ||||||||||    
T  17150301 ttataaacacattttcagaccatctcctatccgatgttgaactcttaacaca 17150352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 18885477 - 18885427
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||||||||  || ||||||||||| ||||||||||    
T  18885477 ttataaacacattgtcagaccatctttta-tcgatgtgggactcttaacaca 18885427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 41666825 - 41666876
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  41666825 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 41666876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 24647712 - 24647662
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||| | ||||| ||||| |||||||||| |||||||||    
T  24647712 ttataaacacattgtccggccatcacctatccgatgtgggactcttaacac 24647662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 1564635 - 1564680
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  1564635 ttataatcacattgtcagaccatctcttatccgatgtgggactctt 1564680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 6919264 - 6919313
Alignment:
Q  96 ataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||  |||||| |||| ||||||||| ||||||||||    
T  6919264 ataaacacattgtcaggtcatctcttatttgatgtgggactcttaacaca 6919313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 24346805 - 24346854
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||| |||||||||| |||| || |||||||||||||| ||||||||    
T  24346805 ttataaatacattgtcaggccatgtcttattcgatgtgggactcttaaca 24346854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 37656631 - 37656582
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||  ||||| ||| |||||| ||||||||    
T  37656631 ttataaacacattgtcagaccattacctatccgacgtgggactcttaaca 37656582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 41667061 - 41667110
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  41667061 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 41667110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 30758367 - 30758407
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    |||||||||||||||||| |||| |||||| ||||||||||    
T  30758367 ttataaacacattgtcaggccatgtcctatccgatgtggga 30758407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 38976949 - 38976913
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgt 130  Q
    |||||||||||||||||||| || |||||||||||||    
T  38976949 ttataaacacattgtcagacaatgtcctattcgatgt 38976913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 16419518 - 16419467
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  16419518 ttataaacacattgtcagaccatgtcctatccgatgtgggactcttaacaca 16419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 33606117 - 33606173
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||||||    
T  33606117 cctacttataaacacattttcaggccatctcctatccgatgtgggactcttaacaca 33606173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 37812336 - 37812387
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||||| |||||||||| ||||||||||    
T  37812336 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacaca 37812387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 42639680 - 42639731
Alignment:
Q  92 atttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  42639680 atttataaacacattgtcagaccatgtcatattcaatgtgggactcttaaca 42639731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 12343818 - 12343867
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||| ||||||||| ||||||||||||| |||||||||| ||||||||    
T  12343818 ttataagcacattgtctgaccatctcctatccgatgtgggactcttaaca 12343867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 17719416 - 17719367
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||||||    
T  17719416 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaaca 17719367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21591797 - 21591748
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  21591797 ttataaacaaattgtcagaccaactcctaatcgatgtgggactcttaaca 21591748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 15124616 - 15124668
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    ||||||||| ||||||||||||| | |||| |||||||||| |||||||||||    
T  15124616 ttataaacatattgtcagaccatgttctatccgatgtgggactcttaacacat 15124668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 2324256 - 2324205
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||| |||||||||||| ||||||  |||||||||| ||||||||||    
T  2324256 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaacaca 2324205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 5711507 - 5711558
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  5711507 ttataaacacattgtcaggccatttcctttccgatgtgggactcttaacaca 5711558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 5711743 - 5711794
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  5711743 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 5711794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 40379277 - 40379328
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||| |||||| ||||| ||||| |||||||||| ||||||||||    
T  40379277 ttataaacacactgtcaggccatcacctatccgatgtgggactcttaacaca 40379328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 10523274 - 10523224
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||| ||| |||||||||||||||||||||| ||| |||||||||| ||||    
T  10523274 cctacttaaaaacacattgtcagaccatctcttatccgatgtgggactctt 10523224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 12343686 - 12343728
Alignment:
Q  103 cattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||| |||||||||||| |||||||||| ||||||||||    
T  12343686 cattgtcaaaccatctcctatccgatgtgggactcttaacaca 12343728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 94088 - 94137
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||| |||||| ||||| ||||| |||||||||| ||||||||    
T  94088 ttataaacacactgtcaggccatcacctatccgatgtgggactcttaaca 94137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 2029785 - 2029736
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||  ||| |||||| |||||||||| ||||||||    
T  2029785 ttataaacacattgtcaggtcatgtcctatccgatgtgggactcttaaca 2029736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 14466478 - 14466527
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  14466478 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 14466527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 17525406 - 17525455
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| || | | |||||||||| ||||||||    
T  17525406 ttataaacacattgtcagaccatgtcatgtccgatgtgggactcttaaca 17525455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 37840353 - 37840304
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||  |||||||||| | |||||||| ||||||||    
T  37840353 ttataaacacattgtcaggtcatctcctatccaatgtgggactcttaaca 37840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 40379512 - 40379561
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||| |||||| ||||| ||||| |||||||||| ||||||||    
T  40379512 ttataaacacactgtcaggccatcacctatccgatgtgggactcttaaca 40379561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 25082600 - 25082656
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||| |||||||||||||||||||||||||| |||  ||| || || ||||||||||    
T  25082600 cctacttataaacacattgtcagaccatctcttatctgatatgagactcttaacaca 25082656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 35772280 - 35772229
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  35772280 ttataaacacattgtcaggccatctcctatccgatgtgggactcttaacaca 35772229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 52961598 - 52961547
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  52961598 ttataaacacattgtcagaccatctcctatccgatgtgggacacttaacaca 52961547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 25713409 - 25713359
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  25713409 ttataaacacattgtcagaccatcacctatccgatgtgggactcttaacac 25713359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 26603445 - 26603395
Alignment:
Q  93 tttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  26603445 tttataaacatattgtcagaccatctcctattcgatgtgagactcttaaca 26603395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 33156985 - 33156935
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  33156985 ttataaacacattgtcagaccatctcctatccgatgtggaactcttaacac 33156935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 20208594 - 20208643
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  20208594 ttataaacacattgtcagaccatgtcctatccgatgtgggactcttaaca 20208643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 3477244 - 3477289
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  3477244 ttataaacacattatcaggacatctcctattcgatgtgggattctt 3477289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 7826099 - 7826144
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||    
T  7826099 ttataaacacattgtcagaccatcttttattcgatgtgggactctt 7826144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 25145555 - 25145604
Alignment:
Q  96 ataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  25145555 ataaacacattgtcagaccatcacctatccgatgtgagactcttaacaca 25145604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 26173524 - 26173573
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||||| |||  ||||||||| ||||||||    
T  26173524 ttataaacacattgtcagaccatctcatatctgatgtgggactcttaaca 26173573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 32952087 - 32952038
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||| |||| ||||||| | |||||||||||||||||    
T  32952087 ttataaacacattgtcaaaccaactcctatccaatgtgggattcttaaca 32952038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 38080621 - 38080572
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||||||| || |||||||||| ||||||||    
T  38080621 ttataaacacattgtcaggccatctcccatccgatgtgggactcttaaca 38080572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 38733168 - 38733119
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||| | |||||||||||| | ||||||||    
T  38733168 ttataaacacattgtcagaccatcacatattcgatgtggaactcttaaca 38733119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 2859697 - 2859744
Alignment:
Q  96 ataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||||    
T  2859697 ataaacacattgtcagaccatcacctatccgatgtgagactcttaaca 2859744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 4112839 - 4112890
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| ||| || |||||||||| ||||||||||    
T  4112839 ttataaacacattgtcaggccatgtcccatccgatgtgggactcttaacaca 4112890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 8870757 - 8870808
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||| |||||| || || |||||||||| ||||||||||    
T  8870757 ttataaacacattgtcacaccatcaccgatccgatgtgggactcttaacaca 8870808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 38668376 - 38668325
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||| |||||| | ||| |||||||||| ||||||||||    
T  38668376 ttataaacacattgtcaaaccatcacatatccgatgtgggactcttaacaca 38668325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 38733398 - 38733347
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||| |||||||||||||| | ||| |||||||||| ||||||||||    
T  38733398 ttataaacatattgtcagaccatcacatatccgatgtgggactcttaacaca 38733347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 51459898 - 51459949
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||| || ||||| ||||| |||||||||| ||||||||||    
T  51459898 ttataaacacattgttaggccatcacctatccgatgtgggactcttaacaca 51459949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 51460150 - 51460201
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||| || ||||| ||||| |||||||||| ||||||||||    
T  51460150 ttataaacacattgttaggccatcacctatccgatgtgggactcttaacaca 51460201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 51589242 - 51589191
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||| |||||||||||| ||||||  |||||||||| ||||||||||    
T  51589242 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaacaca 51589191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 2859460 - 2859506
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctta 140  Q
    |||||||||||||||||| ||||| ||||| |||||||||| |||||    
T  2859460 ttataaacacattgtcaggccatcacctatccgatgtgggactctta 2859506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3169782 - 3169732
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||| |||||||||||| ||||||  |||||||||| |||||||||    
T  3169782 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaacac 3169732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 4098231 - 4098281
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||| ||||||| ||||| ||||||||||| || |||||||||    
T  4098231 ttataaacacatcgtcagacgatctcatattcgatgtgagactcttaacac 4098281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 39348187 - 39348237
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| | ||||||||| |||||||||| |||| ||||    
T  39348187 ttataaacacattgtcaggctatctcctatccgatgtgggactcttcacac 39348237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 15986401 - 15986450
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| | ||||||||| |||||| ||| ||||||||    
T  15986401 ttataaacacattgtcaggctatctcctatccgatgtaggactcttaaca 15986450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 17468360 - 17468315
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    ||||||||| |||||||||||||||| ||| |||||||||| ||||    
T  17468360 ttataaacatattgtcagaccatctcttatccgatgtgggactctt 17468315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 33156454 - 33156405
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||  ||||||| || |||||||||| ||||||||    
T  33156454 ttataaacacattgtcaggtcatctccaatacgatgtgggactcttaaca 33156405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 51589008 - 51588959
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||| |||||||||||| ||||||  |||||||||| ||||||||    
T  51589008 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaaca 51588959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 52650839 - 52650888
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||| | ||||||||||| |||||||||| || |||||    
T  52650839 ttataaacacattgtccggccatctcctatccgatgtgggactcctaaca 52650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 17412352 - 17412304
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    ||||||||||||| |||||| ||||||||| ||||||| || |||||||    
T  17412352 ttataaacacattatcagacaatctcctatccgatgtgagactcttaac 17412304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 39808482 - 39808434
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    |||||||||||||||||||||||| | ||| | |||||||| |||||||    
T  39808482 ttataaacacattgtcagaccatcacatatccaatgtgggactcttaac 39808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 40524719 - 40524755
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgt 130  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  40524719 ttataaacacactgtcagaccatctcatattcgatgt 40524755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 42819316 - 42819276
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  42819316 ttataaacacattgtcagaccatctcttatccgaagtggga 42819276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 20094629 - 20094678
Alignment:
Q  95 tataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  20094629 tataaacacattgtcaggccatcttctattcgatgtgggactcttaacac 20094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 24532489 - 24532538
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  24532489 ttataaacacattgtcaggccatctcctatccgatgtgggactcttaaca 24532538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 422288 - 422336
Alignment:
Q  97 taaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  422288 taaacacattgtcagaccatctcctatccgatgtgggacttttaacaca 422336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 5590439 - 5590485
Alignment:
Q  97 taaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  5590439 taaacacattgtcagaccatctcctatccgatgtgggactctgaaca 5590485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 11232497 - 11232546
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  11232497 ttataaacacattgtcagaccatgtcctgtccgatgtgggactcttaaca 11232546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 12317062 - 12317013
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  12317062 ttataaacacattgtcagaccatgtcctgtccgatgtgggactcttaaca 12317013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 39052997 - 39053046
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||||||    
T  39052997 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaaca 39053046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 29099808 - 29099856
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    ||||||||||||||||||||||||| ||||||||| || || |||||||    
T  29099808 ttataaacacattgtcagaccatcttctattcgatatgagactcttaac 29099856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 11232262 - 11232313
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  11232262 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 11232313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 15042738 - 15042789
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| || ||| |||||||||| ||||||||||    
T  15042738 ttataaacacattgtcaggccatgtcgtatccgatgtgggactcttaacaca 15042789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 39052605 - 39052656
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||| |||||  ||||||||| ||||||||||    
T  39052605 ttataaacacattgtcaggccatcacctatctgatgtgggactcttaacaca 39052656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 34236716 - 34236754
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgg 132  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  34236716 ttataaacacattgtcagaccatctcttatccgatgtgg 34236754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 39960207 - 39960157
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||| ||| |||| ||||||||||| |||||||||| |||||||||    
T  39960207 ttataaacaaattttcaggccatctcctatccgatgtgggactcttaacac 39960157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 10450016 - 10449967
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||||| ||||||| || ||||||||    
T  10450016 ttataaacacattgtcaggccatgtcctatccgatgtgagactcttaaca 10449967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 25325662 - 25325613
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||| || |||| |||||| |||||||||| ||||||||    
T  25325662 ttataaacacattgttaggccatgtcctatccgatgtgggactcttaaca 25325613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 29907794 - 29907839
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  29907794 ttataaacacattgtcagactatctcttatccgatgtgggactctt 29907839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 31197631 - 31197582
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||| |||||  ||||| ||| ||||||||    
T  31197631 ttataaacacattgtcagaccatcacctatctgatgtaggactcttaaca 31197582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 38447495 - 38447540
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||||||||||||||| ||||||| ||| || ||||||||||||    
T  38447495 ttataaacacattgtcaggccatctcttatccgttgtgggattctt 38447540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 4873534 - 4873574
Alignment:
Q  103 cattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||| ||| |||||||||| ||||||||    
T  4873534 cattgtcagaccatctcttatccgatgtgggactcttaaca 4873574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 5932252 - 5932292
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    ||||||||||||||| ||||||| |||||| ||||||||||    
T  5932252 ttataaacacattgttagaccatgtcctatccgatgtggga 5932292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 7289266 - 7289302
Alignment:
Q  92 atttataaacacattgtcagaccatctcctattcgat 128  Q
    ||||||||| | |||||||||||||||||||||||||    
T  7289266 atttataaatatattgtcagaccatctcctattcgat 7289302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 28069425 - 28069477
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    ||||||| |||||||||| |||| || ||| |||||||||| |||||||||||    
T  28069425 ttataaatacattgtcaggccatgtcatatccgatgtgggactcttaacacat 28069477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 39984830 - 39984782
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    ||||||||| |||||||||||| |||||| |||||||| || |||||||    
T  39984830 ttataaacaaattgtcagaccaactcctaatcgatgtgagactcttaac 39984782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 26239984 - 26240037
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacatg 147  Q
    ||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||    
T  26239984 ttataaacacattgtcagaccatgtcctatccgatgtcggactcttaacacatg 26240037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 43688227 - 43688279
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    |||||||||||||||||| |||| |||||| |||||||||| |||||||||||    
T  43688227 ttataaacacattgtcaggccatgtcctatccgatgtgggactcttaacacat 43688279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 2404242 - 2404293
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||||||||  |||||||||| ||||||||||    
T  2404242 ttataaacacattgtcagtccatctcctaaccgatgtgggactcttaacaca 2404293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 3519793 - 3519844
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||||||||    
T  3519793 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaacaca 3519844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 14540809 - 14540860
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||||  |||||||||| ||||||| |||||||||||||    
T  14540809 ttataaacacattgtcaggtcatctcctatccgatgtgtgattcttaacaca 14540860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 3038152 - 3038201
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||| |||| ||||| |||||||||||||| ||||||||    
T  3038152 ttataaacacattgttagacaatctcttattcgatgtgggactcttaaca 3038201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 29469856 - 29469805
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  29469856 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 29469805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 34027409 - 34027358
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||| |||||||| ||| ||||||  |||||||||||||||||||||    
T  34027409 ttataaacaaattgtcaggccaactcctaaccgatgtgggattcttaacaca 34027358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 34124309 - 34124258
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||||||||||| | ||  || |||||||||||||||||||||    
T  34124309 ttataaacacattgtcagaccttatctcatccgatgtgggattcttaacaca 34124258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 2315339 - 2315389
Alignment:
Q  95 tataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||| |||| ||||||||||| | |||||||||||||||||||| ||||    
T  2315339 tataaatacatagtcagaccatcacatattcgatgtgggattcttagcaca 2315389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 2404471 - 2404525
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||| |||||||||||||||||| || |||||||| ||| |||||| ||||||||    
T  2404471 cctacttataaacacattgtcagtccgtctcctatccgacgtgggactcttaaca 2404525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 2544283 - 2544333
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||| |||||||||||| ||||||  |||||||||| |||||||||    
T  2544283 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaacac 2544333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3392998 - 3392948
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| ||||| ||||| ||||||| || |||||||||    
T  3392998 ttataaacacattgtcaggccatcacctatccgatgtgagactcttaacac 3392948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 4267870 - 4267820
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||| |||||||||||| ||||||  |||||||||| |||||||||    
T  4267870 ttataaacaaattgtcagaccaactcctaaccgatgtgggactcttaacac 4267820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 18826556 - 18826606
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    ||||||||||||||||||  |||||||||| | |||||||| |||||||||    
T  18826556 ttataaacacattgtcaggtcatctcctatccaatgtgggactcttaacac 18826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 33834436 - 33834394
Alignment:
Q  100 acacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  33834436 acacattgtcagaccatcacctatccgatgtgggactcttaac 33834394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 36993371 - 36993409
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgg 132  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  36993371 ttataaacatattgtcagaccatatcctattcgatgtgg 36993409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 3520108 - 3520145
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtg 131  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  3520108 ttataaacacattgtcagaccatcacctatccgatgtg 3520145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 5522891 - 5522846
Alignment:
Q  98 aaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||| ||| |||||||||| ||||||||    
T  5522891 aaacacattgtcagaccaactcttatacgatgtgggactcttaaca 5522846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21861310 - 21861261
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  21861310 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 21861261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 29469621 - 29469572
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  29469621 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 29469572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 48243505 - 48243554
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||| | ||||| |||||||| ||||||||    
T  48243505 ttataaacacattgtcaggccatcacatattcaatgtgggactcttaaca 48243554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 32278953 - 32278993
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    |||||||||||||||||||||||| | ||| ||||||||||    
T  32278953 ttataaacacattgtcagaccatcacatatccgatgtggga 32278993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 36993137 - 36993193
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||| ||||||||||||||||||||||| || ||| |||||| | | ||||||||||    
T  36993137 cctacttataaacacattgtcagaccatgtcatatccgatgttgaactcttaacaca 36993193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 44874414 - 44874462
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    ||||||||||||||||||   ||||||||| |||||||||| |||||||    
T  44874414 ttataaacacattgtcaggttatctcctatccgatgtgggactcttaac 44874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 6542774 - 6542827
Alignment:
Q  92 atttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||| |||||||||||||||||||| ||||||| || ||||||||||    
T  6542774 atttataaacagattgtcagaccatctcctatccgatgtgagactcttaacaca 6542827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 12330358 - 12330407
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  12330358 ttataaacacattgtcagaccatgtcctatccgatgtgggactcttaaca 12330407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 33494790 - 33494739
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||||||||    
T  33494790 ttataaatatattgtcagaccatctcctatccgatgtgggactcttaacaca 33494739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 3680262 - 3680212
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||||||||| | ||| |||||||||| |||||||||    
T  3680262 ttataaacacattgtcagaccatcacatatccgatgtgggactcttaacac 3680212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 6543011 - 6543060
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||||| ||| |||||||| | ||||||||    
T  6543011 ttataaacacattgtcagaccatctcttatccgatgtggaactcttaaca 6543060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 8567026 - 8567075
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||| ||||| ||| |||||| ||||||||    
T  8567026 ttataaacacattgtcagaccatcacctatccgaggtgggactcttaaca 8567075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 24554133 - 24554084
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||||||    
T  24554133 ttataaatatattgtcagaccatctcctatccgatgtgggactcttaaca 24554084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 25065157 - 25065209
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaa 141  Q
    |||| ||||||||| ||||||||||||| |||||| |||||||||| ||||||    
T  25065157 cctacttataaacatattgtcagaccatgtcctatccgatgtgggactcttaa 25065209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 4868645 - 4868696
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  4868645 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 4868696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 13353452 - 13353401
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  13353452 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 13353401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 30505754 - 30505703
Alignment:
Q  93 tttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||| |||||||||||||||||||||  ||| |||||||||| |||||||||    
T  30505754 tttacaaacacattgtcagaccatcttatatccgatgtgggactcttaacac 30505703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 33796577 - 33796526
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  33796577 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 33796526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 19639181 - 19639231
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| |||| || ||| | ||||||||||||||||||    
T  19639181 ttataaacacattgtcaggccatatcttatcctatgtgggattcttaacac 19639231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 34345647 - 34345597
Alignment:
Q  95 tataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||| |  ||||||||| |||||||||||||| ||||||||||    
T  34345647 tataaacacattatgtgaccatctcatattcgatgtgggactcttaacaca 34345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 13353217 - 13353168
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  13353217 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 13353168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 19648351 - 19648306
Alignment:
Q  98 aaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||| ||| |||||||||| | ||||||    
T  19648351 aaacacattgtcagaccatctcatatccgatgtgggacttttaaca 19648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 21215001 - 21214952
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||| |||||||| ||||||||| ||| || ||||||||    
T  21215001 ttataaacacattgtgagaccatcacctattcgacgtgtgactcttaaca 21214952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 33796342 - 33796293
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  33796342 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaaca 33796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 10145813 - 10145869
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||  ||||||| || | ||||| |||||||||||||    
T  10145813 cctatttataaacacattatcaggtcatctcccatccaatgtgagattcttaacaca 10145869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 12330247 - 12330287
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    ||||||||||||||||||||||| |||||| |||| |||||    
T  12330247 ttataaacacattgtcagaccatgtcctatccgatctggga 12330287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 31961194 - 31961142
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    |||||||||||||||||| ||||| | |||  ||||||||| |||||||||||    
T  31961194 ttataaacacattgtcaggccatcacatatctgatgtgggactcttaacacat 31961142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 34992566 - 34992517
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  34992566 ttataaacacattgtcagaccatcacctatccgatgtgggactcttaaca 34992517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 38791518 - 38791567
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  38791518 ttataaatacattgtcagaccatctcctatccgatgtgggactcttaaca 38791567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 11659739 - 11659787
Alignment:
Q  83 aaatcacctatttataaacacattgtcagaccatctcctattcgatgtg 131  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||    
T  11659739 aaatcccctatttataaacacattgtcagatcatctcttattcgatgtg 11659787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 19954281 - 19954336
Alignment:
Q  89 cctatttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||||| |||||||||    
T  19954281 cctacttataaacatattgtcagaccatctcctataagatgtgggactcttaacac 19954336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 20327682 - 20327733
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  20327682 ttataaatacattgtcaggccatgtcctatccgatgtgggattcttaacaca 20327733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 35038262 - 35038313
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||||||||    
T  35038262 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaacaca 35038313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 22729113 - 22729067
Alignment:
Q  97 taaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  22729113 taaacacattgtcagaccatctcctatccgatgtgggactctgaaca 22729067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 35038496 - 35038545
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||||||    
T  35038496 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaaca 35038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 34992858 - 34992806
Alignment:
Q  94 ttataaacacatt-gtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||    
T  34992858 ttataaacacatttgtcagaccatcacctatccgatgtgggactcttaacaca 34992806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 4155575 - 4155524
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| || | |||||| |||||||||| ||||||||||    
T  4155575 ttataaacacattgtcaggccttgtcctatgcgatgtgggactcttaacaca 4155524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 20303132 - 20303183
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    ||||||| |||||||||| |||| || ||| |||||||||||||||||||||    
T  20303132 ttataaatacattgtcaggccatgtcatatccgatgtgggattcttaacaca 20303183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 16239607 - 16239557
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacac 144  Q
    |||||||||||||||||| |||| |||||| ||||||| || |||||||||    
T  16239607 ttataaacacattgtcaggccatgtcctatccgatgtgagactcttaacac 16239557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 16927017 - 16927066
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| | |||| |||||||||| ||||||||    
T  16927017 ttataaacacattgtcaggccatgttctatccgatgtgggactcttaaca 16927066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 52994794 - 52994757
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtg 131  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  52994794 ttataaacacattgtcagatcatgtcctattcgatgtg 52994757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 13741170 - 13741210
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    ||||||||||||||||| ||||||||||||| || ||||||    
T  13741170 ttataaacacattgtcaaaccatctcctatttgaagtggga 13741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 39620342 - 39620290
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacacat 146  Q
    ||||||||||||||||||  |||| ||||| ||||||| || |||||||||||    
T  39620342 ttataaacacattgtcaggtcatcacctatccgatgtgagactcttaacacat 39620290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 39683335 - 39683387
Alignment:
Q  93 tttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||  ||||  |||| |||||||||| ||||||||||    
T  39683335 tttataaacacattgtcaggtcatcatctatccgatgtgggactcttaacaca 39683387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 45138870 - 45138910
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggga 134  Q
    |||||||||||||| ||||||||||| ||| ||||||||||    
T  45138870 ttataaacacattgccagaccatctcttatccgatgtggga 45138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 46794070 - 46794034
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgt 130  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  46794070 ttataaacacattgtcagaccatctcttatccgatgt 46794034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 14554 - 14506
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  14554 ttataaacacattgtcagaccatcacctatccgatgtgggactcttaac 14506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 133
Target Start/End: Complemental strand, 14319 - 14280
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtggg 133  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  14319 ttataaacacattgtcagaccatcacctatccgatgtggg 14280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 1932 - 1883
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    ||||||||||||||||||||||| |||| | |||||||||| ||||||||    
T  1932 ttataaacacattgtcagaccatgtcctgtccgatgtgggactcttaaca 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 2167 - 2116
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||||    
T  2167 ttataaacacattgtcaggccatgtcctgtccgatgtgggactcttaacaca 2116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 2746 - 2694
Alignment:
Q  93 tttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||| | ||||||||||||| |||||| |||||||||| ||||||||||    
T  2746 tttataaatatattgtcagaccatgtcctatccgatgtgggactcttaacaca 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 288726 - 288770
Alignment:
Q  95 tataaacacattgtcagaccatctcctattcgatgtgggattctt 139  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||    
T  288726 tataaatacattgtcagaccatctcctatccgatgtgggactctt 288770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 429889 - 429841
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    |||||||||||||||||| ||||| ||||| |||||||||| |||||||    
T  429889 ttataaacacattgtcaggccatcacctatccgatgtgggactcttaac 429841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 6290 - 6239
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaacaca 145  Q
    |||||||||||||||||||| ||||| |||  ||||||||| ||||||||||    
T  6290 ttataaacacattgtcagactatctcttatctgatgtgggactcttaacaca 6239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 20591 - 20542
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaaca 143  Q
    |||||||||||||||||| |||| |||| | |||||||||| ||||||||    
T  20591 ttataaacacattgtcaggccatatcctgtccgatgtgggactcttaaca 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 5822 - 5870
Alignment:
Q  94 ttataaacacattgtcagaccatctcctattcgatgtgggattcttaac 142  Q
    |||||||||||||||||||| || || ||| |||||||||| |||||||    
T  5822 ttataaacacattgtcagactatgtcttatccgatgtgggactcttaac 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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