View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7524_low_8 (Length: 266)
Name: NF7524_low_8
Description: NF7524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7524_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 75 - 259
Target Start/End: Complemental strand, 18895234 - 18895051
Alignment:
| Q |
75 |
cttccaaatgaaaattcaaacatgaactaaatccaaataaaaacaagaagagataaaagatagtatatatagacttcaacaaattaaaggatatatatgt |
174 |
Q |
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| T |
18895234 |
cttccaaatgaaaattcaaacatgaactaa-tccaaataaaaacaagaagagataaaagatagtatatatagacttcaacaaattaaaggatatatatgt |
18895136 |
T |
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| Q |
175 |
cttnnnnnnncttgctagtaactaacctccctaatgtcaatgttactaaaaatgataaataatatcaaatcatataaccaccaaa |
259 |
Q |
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| T |
18895135 |
cttaaaaaaacttgctagtaactaacctccctaatgtcaatgttactaaaaatgataaataatatcaaatcatataaccaccaaa |
18895051 |
T |
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