View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7527_low_1 (Length: 800)

Name: NF7527_low_1
Description: NF7527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7527_low_1
NF7527_low_1
[»] chr4 (46 HSPs)
chr4 (512-699)||(52930359-52930546)
chr4 (324-470)||(52930215-52930362)
chr4 (71-168)||(50052434-50052531)
chr4 (74-168)||(11511468-11511562)
chr4 (74-167)||(50526178-50526271)
chr4 (74-168)||(6034044-6034138)
chr4 (72-168)||(48183055-48183151)
chr4 (74-168)||(31910192-31910286)
chr4 (74-168)||(40574779-40574873)
chr4 (71-168)||(480453-480550)
chr4 (71-168)||(42044373-42044470)
chr4 (74-168)||(41236347-41236441)
chr4 (72-153)||(55475189-55475270)
chr4 (72-168)||(24995113-24995209)
chr4 (72-160)||(29547973-29548061)
chr4 (72-168)||(48647732-48647828)
chr4 (74-160)||(8343177-8343263)
chr4 (70-168)||(29239882-29239980)
chr4 (74-168)||(54473539-54473633)
chr4 (71-164)||(19670726-19670819)
chr4 (72-168)||(29977883-29977979)
chr4 (73-168)||(29234251-29234346)
chr4 (74-168)||(3481654-3481748)
chr4 (21-69)||(52930143-52930191)
chr4 (73-164)||(47986207-47986298)
chr4 (73-164)||(50813902-50813993)
chr4 (72-164)||(32766956-32767048)
chr4 (112-168)||(41823920-41823976)
chr4 (199-257)||(41824007-41824066)
chr4 (94-164)||(17983753-17983823)
chr4 (78-147)||(18769113-18769182)
chr4 (72-148)||(23608233-23608309)
chr4 (78-166)||(53352574-53352661)
chr4 (74-153)||(55079735-55079814)
chr4 (199-255)||(31910317-31910374)
chr4 (215-255)||(50052346-50052386)
chr4 (73-168)||(28480274-28480369)
chr4 (73-168)||(28481149-28481244)
chr4 (73-168)||(28482024-28482119)
chr4 (101-163)||(33703245-33703306)
chr4 (73-147)||(44536773-44536846)
chr4 (72-145)||(47104542-47104615)
chr4 (219-255)||(29240032-29240068)
chr4 (74-144)||(18924525-18924595)
chr4 (218-255)||(3481789-3481826)
chr4 (100-145)||(48463384-48463428)
[»] chr1 (42 HSPs)
chr1 (71-168)||(32813244-32813341)
chr1 (73-168)||(51898689-51898784)
chr1 (70-168)||(2581911-2582009)
chr1 (73-164)||(37926448-37926539)
chr1 (74-168)||(26440734-26440828)
chr1 (72-168)||(38632327-38632423)
chr1 (74-168)||(9474882-9474976)
chr1 (74-168)||(27564741-27564835)
chr1 (74-168)||(37649198-37649292)
chr1 (74-168)||(47452326-47452420)
chr1 (74-168)||(3000319-3000413)
chr1 (74-168)||(48716288-48716382)
chr1 (71-168)||(38595151-38595248)
chr1 (79-168)||(44548382-44548471)
chr1 (74-168)||(6260870-6260964)
chr1 (70-144)||(23597121-23597195)
chr1 (74-164)||(50591010-50591100)
chr1 (71-164)||(5959010-5959103)
chr1 (71-168)||(8346394-8346491)
chr1 (73-168)||(41758804-41758899)
chr1 (73-168)||(50630457-50630552)
chr1 (74-164)||(41608503-41608593)
chr1 (74-164)||(47748443-47748532)
chr1 (72-168)||(45044566-45044662)
chr1 (72-168)||(49811533-49811629)
chr1 (74-168)||(43132-43226)
chr1 (199-257)||(32813372-32813431)
chr1 (79-164)||(26274437-26274522)
chr1 (75-168)||(44453980-44454073)
chr1 (79-167)||(11152385-11152472)
chr1 (104-168)||(13414791-13414855)
chr1 (100-163)||(750239-750301)
chr1 (73-144)||(7740732-7740803)
chr1 (101-168)||(48489328-48489394)
chr1 (100-144)||(5489899-5489942)
chr1 (199-258)||(37926353-37926413)
chr1 (100-144)||(43571020-43571063)
chr1 (100-144)||(48498896-48498939)
chr1 (74-168)||(3302539-3302633)
chr1 (215-256)||(6261012-6261053)
chr1 (199-255)||(45044478-45044535)
chr1 (100-153)||(50448194-50448246)
[»] chr5 (33 HSPs)
chr5 (74-168)||(26720516-26720610)
chr5 (74-168)||(26990265-26990359)
chr5 (74-168)||(28177775-28177869)
chr5 (73-168)||(2740273-2740368)
chr5 (73-168)||(6679697-6679792)
chr5 (74-168)||(14831814-14831908)
chr5 (74-168)||(40145407-40145501)
chr5 (79-168)||(18520890-18520979)
chr5 (72-168)||(15409616-15409712)
chr5 (74-168)||(33149644-33149738)
chr5 (71-168)||(31008985-31009082)
chr5 (72-168)||(36732948-36733044)
chr5 (73-164)||(2252178-2252269)
chr5 (74-168)||(35785199-35785293)
chr5 (74-168)||(35943898-35943992)
chr5 (71-164)||(3921275-3921368)
chr5 (71-168)||(13811649-13811746)
chr5 (74-168)||(42414308-42414402)
chr5 (74-143)||(33825355-33825424)
chr5 (73-165)||(41470425-41470517)
chr5 (74-153)||(6260022-6260101)
chr5 (79-133)||(36875644-36875698)
chr5 (78-137)||(10356638-10356698)
chr5 (79-143)||(16327906-16327970)
chr5 (72-160)||(39688911-39688999)
chr5 (74-168)||(20073522-20073616)
chr5 (72-153)||(9603811-9603892)
chr5 (71-168)||(38296200-38296297)
chr5 (77-113)||(21370017-21370053)
chr5 (215-255)||(31009130-31009170)
chr5 (97-153)||(39557538-39557594)
chr5 (215-253)||(9603955-9603993)
chr5 (199-255)||(15409528-15409585)
[»] chr3 (53 HSPs)
chr3 (74-168)||(26141538-26141632)
chr3 (71-168)||(49607411-49607508)
chr3 (72-168)||(41189770-41189866)
chr3 (74-168)||(20764921-20765015)
chr3 (74-168)||(51419366-51419460)
chr3 (74-168)||(53982011-53982105)
chr3 (74-168)||(33644200-33644294)
chr3 (78-168)||(52629304-52629394)
chr3 (71-168)||(11347928-11348025)
chr3 (79-164)||(48587101-48587186)
chr3 (73-168)||(17470404-17470499)
chr3 (77-168)||(26754698-26754789)
chr3 (74-168)||(47531865-47531959)
chr3 (72-157)||(33118868-33118953)
chr3 (72-148)||(11095379-11095455)
chr3 (72-168)||(11907369-11907465)
chr3 (72-168)||(27714897-27714993)
chr3 (72-168)||(54868901-54868997)
chr3 (74-168)||(8076393-8076487)
chr3 (74-168)||(14623845-14623939)
chr3 (73-147)||(35536625-35536699)
chr3 (79-168)||(31456694-31456783)
chr3 (73-153)||(24699975-24700055)
chr3 (73-143)||(8956761-8956831)
chr3 (74-164)||(45058563-45058652)
chr3 (79-168)||(13898061-13898150)
chr3 (70-159)||(36707439-36707528)
chr3 (73-168)||(48375712-48375807)
chr3 (72-144)||(35965804-35965876)
chr3 (79-168)||(30801739-30801828)
chr3 (73-168)||(9562998-9563093)
chr3 (199-255)||(20764833-20764890)
chr3 (96-164)||(36331339-36331407)
chr3 (205-255)||(14623757-14623808)
chr3 (73-144)||(25395363-25395434)
chr3 (77-160)||(42823114-42823197)
chr3 (79-168)||(25407153-25407243)
chr3 (74-168)||(41080709-41080801)
chr3 (199-255)||(11347840-11347897)
chr3 (199-255)||(26141448-26141505)
chr3 (218-255)||(35536771-35536808)
chr3 (219-255)||(8076539-8076575)
chr3 (73-145)||(36331407-36331479)
chr3 (218-257)||(8956907-8956946)
chr3 (204-255)||(24699873-24699924)
chr3 (72-147)||(35093583-35093658)
chr3 (205-255)||(35965700-35965751)
chr3 (72-139)||(1758491-1758560)
chr3 (73-110)||(21746247-21746284)
chr3 (218-255)||(30801651-30801688)
chr3 (215-256)||(35093727-35093768)
chr3 (199-255)||(41189682-41189739)
chr3 (199-255)||(51419278-51419335)
[»] chr6 (30 HSPs)
chr6 (73-168)||(31976247-31976342)
chr6 (81-168)||(32869685-32869772)
chr6 (79-168)||(22880664-22880753)
chr6 (73-168)||(11427615-11427712)
chr6 (74-168)||(17598554-17598648)
chr6 (71-168)||(31110767-31110862)
chr6 (71-164)||(30341370-30341463)
chr6 (72-164)||(15990052-15990144)
chr6 (74-164)||(15508034-15508124)
chr6 (74-168)||(29857827-29857921)
chr6 (74-164)||(4231548-4231638)
chr6 (70-168)||(6209471-6209569)
chr6 (74-139)||(31953065-31953130)
chr6 (79-141)||(28536519-28536581)
chr6 (86-148)||(31109426-31109488)
chr6 (79-168)||(23128133-23128222)
chr6 (71-163)||(15832574-15832666)
chr6 (199-257)||(31976373-31976432)
chr6 (71-144)||(12732479-12732552)
chr6 (81-140)||(946383-946442)
chr6 (117-168)||(30870057-30870108)
chr6 (78-144)||(9379742-9379808)
chr6 (218-256)||(22421996-22422034)
chr6 (199-255)||(31110679-31110736)
chr6 (100-144)||(3213523-3213566)
chr6 (100-144)||(21293611-21293654)
chr6 (73-108)||(22422084-22422119)
chr6 (220-255)||(31952948-31952983)
chr6 (100-157)||(7367659-7367715)
chr6 (218-251)||(29857972-29858005)
[»] chr7 (47 HSPs)
chr7 (74-168)||(46374808-46374902)
chr7 (75-168)||(35522877-35522970)
chr7 (73-166)||(46033809-46033902)
chr7 (73-168)||(3434561-3434656)
chr7 (72-168)||(8080389-8080485)
chr7 (72-168)||(7389387-7389483)
chr7 (72-168)||(19436193-19436289)
chr7 (73-165)||(26296643-26296735)
chr7 (74-168)||(19329842-19329936)
chr7 (79-168)||(3784000-3784089)
chr7 (71-168)||(38837214-38837311)
chr7 (68-168)||(21234395-21234495)
chr7 (73-168)||(36361919-36362014)
chr7 (74-168)||(38267040-38267134)
chr7 (70-168)||(40957703-40957801)
chr7 (74-168)||(31735884-31735971)
chr7 (73-168)||(36362025-36362120)
chr7 (74-168)||(35137533-35137627)
chr7 (79-168)||(3694372-3694461)
chr7 (74-164)||(8238212-8238303)
chr7 (73-164)||(22343360-22343451)
chr7 (73-164)||(41915740-41915831)
chr7 (74-168)||(4999520-4999614)
chr7 (71-164)||(7727903-7727996)
chr7 (74-163)||(32564437-32564526)
chr7 (72-168)||(36208171-36208267)
chr7 (72-164)||(38044195-38044287)
chr7 (71-144)||(18207177-18207250)
chr7 (79-168)||(32951499-32951588)
chr7 (74-163)||(40846124-40846213)
chr7 (71-135)||(35468894-35468958)
chr7 (74-144)||(39255953-39256023)
chr7 (199-255)||(46374742-46374799)
chr7 (74-166)||(41423682-41423774)
chr7 (199-257)||(46033717-46033776)
chr7 (71-140)||(10343597-10343666)
chr7 (199-255)||(35523001-35523058)
chr7 (71-123)||(11044185-11044237)
chr7 (198-256)||(26296768-26296827)
chr7 (71-142)||(45223039-45223110)
chr7 (215-256)||(12311046-12311087)
chr7 (199-255)||(21234526-21234583)
chr7 (199-254)||(16374743-16374799)
chr7 (104-168)||(16374830-16374894)
chr7 (100-144)||(44326301-44326344)
chr7 (100-163)||(26898336-26898398)
chr7 (199-255)||(31736002-31736059)
[»] chr2 (48 HSPs)
chr2 (74-168)||(40613908-40614002)
chr2 (71-168)||(42257190-42257287)
chr2 (73-168)||(5574494-5574589)
chr2 (71-168)||(38273148-38273245)
chr2 (74-168)||(17473020-17473114)
chr2 (79-168)||(28863460-28863549)
chr2 (71-168)||(33436106-33436203)
chr2 (72-168)||(9058478-9058574)
chr2 (72-168)||(30915461-30915557)
chr2 (73-166)||(36168835-36168928)
chr2 (72-168)||(10249388-10249484)
chr2 (73-168)||(7465741-7465836)
chr2 (73-168)||(32505654-32505749)
chr2 (74-168)||(13438343-13438437)
chr2 (74-168)||(28381661-28381755)
chr2 (71-168)||(20700812-20700909)
chr2 (73-168)||(2533123-2533217)
chr2 (73-143)||(33436210-33436280)
chr2 (74-168)||(40701478-40701572)
chr2 (79-168)||(19930826-19930915)
chr2 (71-168)||(26891510-26891607)
chr2 (64-153)||(38882835-38882923)
chr2 (71-164)||(45097745-45097838)
chr2 (74-168)||(4060685-4060779)
chr2 (74-168)||(27864704-27864798)
chr2 (74-164)||(43490121-43490211)
chr2 (74-168)||(17820010-17820104)
chr2 (74-164)||(38732354-38732444)
chr2 (72-144)||(15428770-15428842)
chr2 (94-164)||(2997497-2997567)
chr2 (72-142)||(17823782-17823852)
chr2 (218-259)||(20700960-20701001)
chr2 (199-255)||(40613820-40613877)
chr2 (80-168)||(3439985-3440073)
chr2 (71-164)||(13365348-13365443)
chr2 (79-147)||(41575142-41575210)
chr2 (75-145)||(44151924-44151995)
chr2 (199-256)||(38273060-38273117)
chr2 (128-168)||(3154197-3154237)
chr2 (215-255)||(3440121-3440161)
chr2 (199-257)||(36168961-36169020)
chr2 (118-168)||(3737987-3738037)
chr2 (217-255)||(33436345-33436383)
chr2 (215-260)||(3738085-3738130)
chr2 (199-251)||(7465657-7465710)
chr2 (199-251)||(17473145-17473198)
chr2 (199-251)||(19930742-19930795)
chr2 (199-251)||(28863580-28863633)
[»] chr8 (41 HSPs)
chr8 (74-168)||(43414587-43414681)
chr8 (73-168)||(37038478-37038573)
chr8 (72-168)||(4854869-4854965)
chr8 (76-168)||(10621093-10621185)
chr8 (74-168)||(15048188-15048281)
chr8 (79-168)||(5957835-5957924)
chr8 (65-168)||(12831038-12831141)
chr8 (74-168)||(504127-504221)
chr8 (74-168)||(15197333-15197427)
chr8 (74-168)||(34012302-34012396)
chr8 (68-168)||(10284637-10284737)
chr8 (72-168)||(14547920-14548016)
chr8 (74-168)||(1179946-1180040)
chr8 (71-164)||(16383374-16383467)
chr8 (73-166)||(44507095-44507188)
chr8 (74-144)||(20074964-20075034)
chr8 (74-168)||(23122603-23122697)
chr8 (74-168)||(40423949-40424043)
chr8 (72-164)||(34307214-34307306)
chr8 (74-144)||(30479504-30479574)
chr8 (71-164)||(16056411-16056504)
chr8 (72-164)||(24307803-24307895)
chr8 (94-168)||(8841438-8841512)
chr8 (72-168)||(15258935-15259031)
chr8 (73-164)||(32032724-32032814)
chr8 (71-137)||(24307626-24307692)
chr8 (73-139)||(17443824-17443890)
chr8 (72-168)||(42221513-42221609)
chr8 (219-258)||(8841347-8841386)
chr8 (118-168)||(9122229-9122279)
chr8 (218-255)||(42354506-42354543)
chr8 (199-255)||(43414499-43414556)
chr8 (100-144)||(20148883-20148926)
chr8 (100-163)||(2547100-2547162)
chr8 (74-153)||(14055613-14055692)
chr8 (100-163)||(29705466-29705528)
chr8 (79-113)||(9122200-9122234)
chr8 (73-111)||(25838196-25838234)
chr8 (74-168)||(38229429-38229522)
chr8 (103-144)||(3743894-3743934)
chr8 (220-257)||(10621013-10621050)
[»] scaffold1268 (1 HSPs)
scaffold1268 (74-168)||(935-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (74-168)||(935-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (71-168)||(10115-10212)
[»] scaffold0237 (2 HSPs)
scaffold0237 (74-168)||(4029-4123)
scaffold0237 (218-251)||(4174-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (94-163)||(152518-152587)
[»] scaffold0316 (2 HSPs)
scaffold0316 (74-168)||(17058-17148)
scaffold0316 (215-255)||(17245-17285)
[»] scaffold0110 (1 HSPs)
scaffold0110 (74-164)||(8873-8963)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 2e-94; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 512 - 699
Target Start/End: Original strand, 52930359 - 52930546
Alignment:
Q  512 tagagcatgttgatccaaaaacggatcaattattttcattttaattttcattattatattaataatatatgcggttgcggtatatgatgacagacaaatg 611  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52930359 tagagcatgttgatccaaaaacggatcaattattttcattttcattttcattattatattaataatatatgcggttgcggtatatgatgacagacaaatg 52930458  T
Q  612 acattttgcgacctaaaaaatgtcagaagtcatttccttattgttctctttctgtctgtgaagttaagaggcgctcgcgatcacagtt 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  52930459 acattttgcgacctaaaaaatgtcagaagtcatttccttattgttctctttctgtctgtaaagttaagaggcggtcgcgatcacagtt 52930546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 324 - 470
Target Start/End: Original strand, 52930215 - 52930362
Alignment:
Q  324 aagacaatctttattcgtgtttactagtt---gggtgtagttgtagtacgtacgtggctctatatattgccaatttcacacacgtttctgatgannnnnn 420  Q
    |||||||||||||||||||||||||| |    |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  52930215 aagacaatctttattcgtgtttactattactagtatgtagttgtagtacgtacgtggctctatatattgccaatttcacacacgtttctgatga--tttt 52930312  T
Q  421 nnataatactagttgggggattacttgtaacaaaaattattgattttaga 470  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52930313 ttataatactagttgggggattacttgtaacaaaaattattgattttaga 52930362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 50052531 - 50052434
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  50052531 aaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 11511562 - 11511468
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcac 167  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 6034044 - 6034138
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| || ||||| |||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 48183151 - 48183055
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 31910192 - 31910286
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||| | | |||||||| ||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 40574779 - 40574873
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||  |  |||||||||||| |||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcaca 40574873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 480550 - 480453
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||| |||||||||    
T  480550 aaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 42044470 - 42044373
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||  ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  42044470 aaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 55475189 - 55475270
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| || |||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatgga 55475270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 24995209 - 24995113
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||| || |||| |||||| |||||||||||||||| |||||||||||||||| |||||||| ||||| |||| ||||||||||||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 29548061 - 29547973
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgca 160  Q
    ||||||||||||||||| ||||||||||||||||||||| || || ||||||||| |||||||||||| |||| || ||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgca 29547973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 48647828 - 48647732
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||| ||||| ||||||||||||  |||||||||  ||||||||||||||||||||| |||||||||||| ||||  |||||||||||||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 8343263 - 8343177
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgca 160  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||| || ||||| ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgca 8343177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 29239882 - 29239980
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||| |||||||| |||||| ||||| |||| ||| ||||||||||    
T  29239882 taaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||| ||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 19670819 - 19670726
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||| || |||| |||| |||||||||||| |||| || ||||| ||||||||||    
T  19670819 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 29977883 - 29977979
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||| | | || ||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 29234346 - 29234251
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| | |||  || ||||||||||||||| ||||| |||| ||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 3481654 - 3481748
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| | |||||||||||||||| |||| ||||||||| ||||||||||||| | ||||| |||| ||| ||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 52930143 - 52930191
Alignment:
Q  21 ttggttcaccttaaaccttattactttttaaaacgttaaccattaattc 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52930143 ttggttcaccttaaaccttattactttttaaaacgttaaccattaattc 52930191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 47986207 - 47986298
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| ||| ||||||||||||||||| || || ||| ||||| |||||||||||| |||| || ||||| ||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 50813993 - 50813902
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| |||  ||||||||| ||||||||| || ||||||||| |||||||||||| ||||||| ||| | ||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 32766956 - 32767048
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||||| |||  ||||||||||||||||||| || ||||||| | |||||||||||| |||| || ||||| || |||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaag 32767048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 41823920 - 41823976
Alignment:
Q  112 cctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 41824007 - 41824066
Alignment:
Q  199 taatgtatgaggtgta-aaaggtgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  41824007 taatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacattttccat 41824066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 17983823 - 17983753
Alignment:
Q  94 ccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 18769113 - 18769182
Alignment:
Q  78 tatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtca 147  Q
    ||||||||||| ||||||||| ||  | ||||||||| ||||||||||| ||||||||||||||||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtggtca 18769182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 23608233 - 23608309
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcac 148  Q
    |||||| |||||| ||||||| |||||| || ||||||||| ||| ||||||||| ||||||||||||||| |||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcac 23608309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 53352661 - 53352574
Alignment:
Q  78 tatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagca 166  Q
    ||||||||||||||| ||||||||| |||||||  |||||||||| ||| ||||||||||||||| || |  |||| ||||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 55079814 - 55079735
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    ||||||||||||||| ||| |||||||||||||||||||  || ||||||| | |||||||||||| |||| || |||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatgga 55079735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 31910317 - 31910374
Alignment:
Q  199 taatgtatgaggtgtaaaag-gtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||||    
T  31910317 taatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacattttcc 31910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 50052386 - 50052346
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  50052386 aaaggtgtatgggaataaagggtgtctatgtaacattttcc 50052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 28480369 - 28480274
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| ||||||||||| ||||||||| ||||||||   ||||||| |||| |||||||||||| || ||||  |||| ||| ||||| ||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 28481244 - 28481149
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| ||||||||||| ||||||||| ||||||||   ||||||| |||| |||||||||||| || ||||  |||| ||| ||||| ||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 28482119 - 28482024
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| ||||||||||| ||||||||| ||||||||   ||||||| |||| |||||||||||| || ||||  |||| ||| ||||| ||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 33703306 - 33703245
Alignment:
Q  101 tggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||  || ||||||||||||||    
T  33703306 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccgcacaa 33703245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 44536846 - 44536773
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtca 147  Q
    |||||||||||||||| |||   |||||||||||||||||| || ||| ||||| |||||||||||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtca 44536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 47104542 - 47104615
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggt 145  Q
    |||||| |||||| |||||||| ||||| || |||||||| || | ||||||||| |||||| |||||||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggt 47104615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 29240032 - 29240068
Alignment:
Q  219 gtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||||||||| |||||||||||||||||||||    
T  29240032 gtgtatgggaataaagggtgtctatgtaacattttcc 29240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 18924595 - 18924525
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||| |||| | | |||||||||||||||||||| || | | ||||| |||||||||||| ||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtgg 18924525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 3481789 - 3481826
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  3481789 ggtgtatgagaataaagggtgtctatgtaacattttcc 3481826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 48463384 - 48463428
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggt 145  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  48463384 gtggcaatacacccttta-cacccacataaaattctgacatgtggt 48463428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 32813244 - 32813341
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 51898784 - 51898689
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 2581911 - 2582009
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  2581911 taaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 37926539 - 37926448
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaag 37926448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 26440734 - 26440828
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 38632423 - 38632327
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 9474976 - 9474882
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 27564835 - 27564741
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||  |||| |||| ||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 37649198 - 37649292
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 47452420 - 47452326
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||| |||||| ||||| |||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 38595151 - 38595248
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||| ||| | ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||| |||||||||    
T  38595151 aaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 44548471 - 44548382
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 6260870 - 6260964
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||| ||||| |||||||||||| ||||||||| | ||||||||||||||||||| ||| |||||||| |||| |||||| |||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcaca 6260964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 23597195 - 23597121
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||||    
T  23597195 taaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtgg 23597121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 5959103 - 5959010
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| ||||| |||||||||||||  || ||||||||| |||||||||||| ||||||| ||||| ||||||||||    
T  5959103 aaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 8346491 - 8346394
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| ||||||||||| || | ||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| || |||||||||||    
T  8346491 aaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 41758804 - 41758899
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| | |||  |||||||||||||||| ||| ||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 50630457 - 50630552
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||| | ||||||||||||||||| |||||   ||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 41608593 - 41608503
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| |||||||||||||||||||||||| || |||| |||| |||||||||||| |||| || ||||| |||| |||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaag 41608503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 47748443 - 47748532
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| | | |||||||||||||||||||||| | |||||| |||||||||||||| |||| || ||||||||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacacccttga-cacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 45044662 - 45044566
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||| ||||||| | |||||||||||| || | |||||||| ||||||||| ||||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 49811629 - 49811533
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||| | || || ||  |||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| ||||||||||||||  |||||| | ||||||| ||||| ||||||||| ||||||||||||||| ||||| ||||  |||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 32813372 - 32813431
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  32813372 taatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttccat 32813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 26274437 - 26274522
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||| ||||| ||||||||||| | ||| ||| ||||| ||||||||||||| | ||||| ||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 44453980 - 44454073
Alignment:
Q  75 agttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||| | ||| ||||||||||| |  || | ||||||| |||||||||||| ||||| || |||||||| ||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 11152472 - 11152385
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcac 167  Q
    |||| ||||||||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||| ||||  | || |||||||||||||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 13414791 - 13414855
Alignment:
Q  104 caatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||| ||||||||| |||||||| |||||| ||||| |||| ||| ||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 750239 - 750301
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||| ||||||| ||| |||||    
T  750239 gtggcaatacacccttta-cacccacacaaaattctgacacgtggtaacatggaccccacacaa 750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 7740732 - 7740803
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||||||||||| |||| ||||| ||| ||||||| || || ||||| |||||||||| ||||||||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtgg 7740803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 48489328 - 48489394
Alignment:
Q  101 tggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||  | || ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  48489328 tggcaatacaccctgga-catccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 5489942 - 5489899
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  5489942 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 5489899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 37926413 - 37926353
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttccatt 258  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||| ||| ||||||||||    
T  37926413 taatgtatggggtgtacaaggatgtatgtgaataaatggtgtctatataatattttccatt 37926353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 43571020 - 43571063
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  43571020 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 43571063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 48498896 - 48498939
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  48498896 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 48498939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 3302633 - 3302539
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||| ||||||||||||| ||||| |  | |  ||||||||| |||||||||||||||  ||| ||||| |||  |||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 3302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 6261012 - 6261053
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  6261012 aaaggtgtatgaaaataaatggtgtgtatgtaacattttcca 6261053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 45044535 - 45044478
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||| ||||||||| |||||| ||||||||||||    
T  45044535 taatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttcc 45044478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 50448194 - 50448246
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||  |||||||    
T  50448194 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatgga 50448246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 7e-39; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 26720516 - 26720610
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 26990265 - 26990359
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 28177775 - 28177869
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 2740273 - 2740368
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 6679697 - 6679792
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 14831814 - 14831908
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 40145407 - 40145501
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 18520979 - 18520890
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 15409712 - 15409616
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||| |||||||  |||| ||||||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 33149738 - 33149644
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||| |||||||| ||||| |||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 31008985 - 31009082
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||| ||||||||||||| |||||||  |||  ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  31008985 aaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 36733044 - 36732948
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||||||| | ||||| |||| ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 2252269 - 2252178
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 35785199 - 35785293
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| || || |||||||||||||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||| || || |||||||| ||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 3921368 - 3921275
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 13811649 - 13811746
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| | |||||||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  13811649 aaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |  |||||||||||||||||||| ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 33825424 - 33825355
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 143  Q
    |||| ||||| ||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtg 33825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagc 165  Q
    ||||| || ||||||||||| | ||||||||||||||| ||||||| |  || ||||||||||||||||| ||||| |||| |||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 6260101 - 6260022
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    |||| |||||||||| ||| || |||||| ||||||||||||||||||||||  |||||||| |||| ||||||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatgga 6260022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaat 133  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  78 tatgatacatagacatccttaggtggcaataca-ccctttaacacccacataaaaatctga 137  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 16327906 - 16327970
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 143  Q
    |||||| ||| | ||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtg 16327970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 39688999 - 39688911
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgca 160  Q
    ||||||||||||||||| ||| ||||| ||||||||||| || || ||||||||| |||||||||| | ||||||| ||| | ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgca 39688911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||| ||||||||| |||| || ||||||||||||| |||| |||||||||||||  ||||||  ||| |||| || |||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 9603811 - 9603892
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    |||||| |||||||||| |||||||||||||  ||||||| | || ||||| ||| ||||||||||||| |||||| |||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatgga 9603892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 38296200 - 38296297
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||   |||||||| |||||||||  |||| ||||||| ||||||| ||||||| |  || |||||||  ||||||||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcaca 38296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 21370017 - 21370053
Alignment:
Q  77 ttatgatacatagacatccttaggtggcaatacaccc 113  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21370017 ttatgatacatagacatccttaggtggtaatacaccc 21370053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 31009130 - 31009170
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  31009130 aaaggtgtatgagaataaagggtgtctatgtaacattttcc 31009170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 39557594 - 39557538
Alignment:
Q  97 taggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    ||||||| ||||||||  |||||| ||||| |||||||||||||||| |||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatgga 39557538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 9603955 - 9603993
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacatttt 253  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  9603955 aaaggtgtatgagaataaatggtgtctacgtaacatttt 9603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 15409585 - 15409528
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||| ||||||| ||||| |||||||||||||||    
T  15409585 taatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacattttcc 15409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 7e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 26141632 - 26141538
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 49607411 - 49607508
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||    
T  49607411 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 41189866 - 41189770
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 20765015 - 20764921
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||| |||| |||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 53982011 - 53982105
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 33644200 - 33644294
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 52629304 - 52629394
Alignment:
Q  78 tatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||| |||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 11348025 - 11347928
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||| ||||||||||||||||| |||||||| || ||| |||||||    
T  11348025 aaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 48587186 - 48587101
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 17470404 - 17470499
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 26754698 - 26754789
Alignment:
Q  77 ttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||| ||||||||||||||||||||||  ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 47531865 - 47531959
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||||||| || ||| | ||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcaca 47531959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 33118953 - 33118868
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatccc 157  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||| |||||||| ||||| ||||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccc 33118868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 11095455 - 11095379
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcac 148  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcac 11095379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 11907369 - 11907465
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||| ||||||||| |||||||| | | ||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 27714993 - 27714897
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| | |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 54868997 - 54868901
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| || || |||| ||||||||| ||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||| ||| |||||||||||| |||||||||| ||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |||  |||| | | ||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 35536625 - 35536699
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtca 147  Q
    ||||| |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtca 35536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 31456694 - 31456783
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| || |||| ||||||||||||||| ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 24700055 - 24699975
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||| ||| ||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtgga 24699975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 8956761 - 8956831
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 143  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||||| |||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtg 8956831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||| |||  || ||||| ||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 13898150 - 13898061
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||  |||| | | ||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 36707528 - 36707439
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgc 159  Q
    |||||||| |||||||||||| | ||||||||| ||||||||||||| ||| ||||| ||||||||||||||| || || ||||||||||    
T  36707528 taaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 48375807 - 48375712
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||| |||||||| ||||||||| |||||||||| | || | ||| | |||||||||||  ||||||||||||| ||||||||||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcaca 48375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 35965876 - 35965804
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||| |||||||||| ||||||||| |||  |||||| ||||| |||||||||||||||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg 35965804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 30801828 - 30801739
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| |||||||||  |||||||||||| | ||||||| |||||| ||||| || |||| ||||| ||| ||||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 9562998 - 9563093
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||| ||| | |||| || ||||||| ||||| ||| ||| ||||||||||||||||| ||||| ||||||| |||||| ||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 20764890 - 20764833
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||    
T  20764890 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 20764833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  96 ttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||| ||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 14623808 - 14623757
Alignment:
Q  205 atgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||||||    
T  14623808 atgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 25395434 - 25395363
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||| ||||||||||| ||||||||| ||||| ||||| || |||| ||||||| |||||||||||| ||||    
T  25395434 agagctatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtgg 25395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 42823114 - 42823197
Alignment:
Q  77 ttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgca 160  Q
    |||||||||||| ||| | ||| |||| ||||||||| || ||||||||| |||||| ||||| ||||||| ||||| ||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgca 42823197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 25407243 - 25407153
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaa-tctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||| ||| || |||||||||||| |||| || |||| |||| ||||| ||||||||||| ||| ||||||||| ||||| ||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacaca 25407153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 41080709 - 41080801
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||||||| || |||| ||||||||| ||||||||  |||||||||| | |||||||  |||| ||| ||||||||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcaca 41080801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 11347897 - 11347840
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||||||||||| |||||||||||| ||||||||    
T  11347897 taatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccattttcc 11347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 26141505 - 26141448
Alignment:
Q  199 taatgtatgaggtgtaaaag-gtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| ||| |||||||| |||||| |||||||||||||||||||||    
T  26141505 taatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 26141448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 35536771 - 35536808
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||| |||||||||||||||||||||||||||||    
T  35536771 ggtgtatgagaataaatggtgtctatgtaacattttcc 35536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 8076539 - 8076575
Alignment:
Q  219 gtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||| |||||||||||||||||||||||||||||    
T  8076539 gtgtatgagaataaatggtgtctatgtaacattttcc 8076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 36331479 - 36331407
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggt 145  Q
    |||||||||||||||| ||| |||||| ||||||| ||||| || ||| ||||| ||||||||| || |||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 8956907 - 8956946
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  8956907 ggtgtatgagaataaatgctgtctatgtaacattttccat 8956946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 24699924 - 24699873
Alignment:
Q  204 tatgaggtgtaaaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||||| ||| |||||| ||||||| | |||||||||||||||||||    
T  24699924 tatgaggtgtataagatgtatgagaataaaagatgtctatgtaacattttcc 24699873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 35093583 - 35093658
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtca 147  Q
    |||||||| |||||||||||| | ||||||| ||||||| | ||| ||| ||||  |||||||||||| |||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtca 35093658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 35965751 - 35965700
Alignment:
Q  205 atgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||||| |||| |||||| ||||||| |||||||||||||||||||||    
T  35965751 atgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 35965700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 1758560 - 1758491
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaataca--ccctttaacacccacataaaaatctgaca 139  Q
    |||||||||||||||||| || || ||||| ||||||||  ||| || ||||||||| ||||||||||||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgaca 1758491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 21746284 - 21746247
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaataca 110  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaataca 21746247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 30801688 - 30801651
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  30801688 ggtgtatgagaataaaaggtgtctatgtaacattttcc 30801651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 35093727 - 35093768
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    ||||||||||| ||||||||| |||||| |||||||||||||    
T  35093727 aaaggtgtatgagaataaatgatgtctaggtaacattttcca 35093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 41189739 - 41189682
Alignment:
Q  199 taatgtatgaggtgtaaaag-gtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||||  ||||| ||| |||||||| |||||| |||||||||||||||||||||    
T  41189739 taatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 41189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 51419335 - 51419278
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| ||||||| |||||| ||||| |||||||||||||||    
T  51419335 taatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacattttcc 51419278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 31976247 - 31976342
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 32869685 - 32869772
Alignment:
Q  81 gatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 22880753 - 22880664
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||| |||| ||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 11427615 - 11427712
Alignment:
Q  73 agagttatgatacatagacatcct--taggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| |||  |||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 17598554 - 17598648
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 31110862 - 31110767
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||   |||||||| || |||||||||||    
T  31110862 aaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 30341463 - 30341370
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 15990144 - 15990052
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| | |||| |||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||| |||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 4231548 - 4231638
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||  |||||||| ||||||||||||||||| || ||||| ||||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 6209569 - 6209471
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| |||||||||||||| ||||||||||||||||||  ||| |||| |||| ||||||||| ||||| ||||| |||| ||||||| ||||||    
T  6209569 taaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 31953130 - 31953065
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgaca 139  Q
    |||| |||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 28536581 - 28536519
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacg 141  Q
    |||||||||| ||||||||||||||||||||| || || ||||||||| ||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg 28536519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 31109488 - 31109426
Alignment:
Q  86 atagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcac 148  Q
    ||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcac 31109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 23128222 - 23128133
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| ||||||| | ||| |||  |||||| ||||| ||||||||| ||||||||||||||| ||||| |||||||| ||||||||||    
T  23128222 atgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 15832574 - 15832666
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    ||||||| |||||||||||||| | ||||||| ||||| | | ||| ||||||||| |||||| |||||||| ||||| ||||||| ||||||    
T  15832574 aaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 31976373 - 31976432
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    ||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  31976373 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttccat 31976432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 12732479 - 12732552
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||| ||||||||||||||| |||| ||||||||| |  | || ||||||||| |||||||||||||||||    
T  12732479 aaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtgg 12732552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 946383 - 946442
Alignment:
Q  81 gatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacac 140  Q
    ||||||||||||||||||||||  |||||||||||| ||||| ||  |||||||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacac 946442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 30870057 - 30870108
Alignment:
Q  117 aacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| |||||||||| ||| ||||||||||||| ||||||||||||||    
T  30870057 aacacccatataaaaatctaacatgtggtcacatggaccccgcacaagcaca 30870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 9379808 - 9379742
Alignment:
Q  78 tatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||||||| || ||||||| || || ||||||| | |||||| ||||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtgg 9379742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 22422034 - 22421996
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  22422034 ggtgtatgagaataaatggtgtctatgtaacattttcca 22421996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 31110736 - 31110679
Alignment:
Q  199 taatgtatgaggtgta-aaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||||||||||| |||||| | |||||||||||||||||||    
T  31110736 taatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 3213566 - 3213523
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  3213566 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 3213523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 21293611 - 21293654
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  21293611 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 21293654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 108
Target Start/End: Complemental strand, 22422119 - 22422084
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaata 108  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaata 22422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 31952983 - 31952948
Alignment:
Q  220 tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||| |||||||||||||||||||||||||||||    
T  31952983 tgtatgagaataaatggtgtctatgtaacattttcc 31952948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 7367715 - 7367659
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatccc 157  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||  || ||||||||    
T  7367715 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacctggatccc 7367659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 29857972 - 29858005
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||||||||||||||||||||||||||| ||||    
T  29857972 ggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 2e-36; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 75 - 168
Target Start/End: Original strand, 35522877 - 35522970
Alignment:
Q  75 agttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 46033902 - 46033809
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagca 166  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 3434561 - 3434656
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||| |||||||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 8080485 - 8080389
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 7389387 - 7389483
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 19436289 - 19436193
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| ||||||||||| |||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 26296643 - 26296735
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagc 165  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||| || ||||| |||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagc 26296735  T

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Target: chr7; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 19329842 - 19329936
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||  |||| |||| ||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 3784000 - 3784089
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| ||||||||||||||||| | ||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

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Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 38837214 - 38837311
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  38837214 aaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 21234395 - 21234495
Alignment:
Q  68 tctaaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcac 167  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||| |||||||| | |||||| | |||||||||||||    
T  21234395 tctaatgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcac 21234494  T
Q  168 a 168  Q
    |    
T  21234495 a 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 36362014 - 36361919
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 38267040 - 38267134
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 40957703 - 40957801
Alignment:
Q  70 taaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||| ||||||||||||||  ||||||||||||||||| |||| | ||||||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  40957703 taaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 31735884 - 31735971
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||       |||||||| |||||||||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcaca 31735971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 36362025 - 36362120
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 35137533 - 35137627
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||| ||||||||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 3694372 - 3694461
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| ||| ||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  74 gagttatgatacatagacatcct-taggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||| |||||||||||| || |||| ||||| ||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 22343360 - 22343451
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||  || ||||| ||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 41915740 - 41915831
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| ||| |||||||||||||||||||| || ||||| ||| |||||||||||| |||| || ||||| ||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||| |||||||||||| ||| ||||||||| |||||||||| |||| ||||| |||| ||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 7727903 - 7727996
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| |||||||||| ||||||||  || |||  ||||||||||||||||| ||||||| ||||| ||||||||||    
T  7727903 aaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 32564526 - 32564437
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    ||||||||||||||| |||| ||||||||||||||||||| || ||||||||| |||||||||||| ||||  | ||||| |||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaa 32564437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 36208171 - 36208267
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||| |||||||||| ||||||  | || ||||||||| ||||| |||||| |||||||| |||| || |||||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 38044195 - 38044287
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || ||| ||||| |||||||||||| || | || ||||| ||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 18207177 - 18207250
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||||||| |||||||||||||||||||  || ||||||| | |||||||| ||||||||    
T  18207177 aaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg 18207250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 32951588 - 32951499
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||  ||||| || ||||||| ||||||||| ||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||||| |||||||| ||| || || | ||||| |||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 35468958 - 35468894
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatct 135  Q
    ||||||| ||||||||||||||||||||| |||||||||| | ||| ||||||||||||||||||    
T  35468958 aaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 39256023 - 39255953
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||||||||||||||| |||||||||||||||||||  || | ||||| | |||||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg 39255953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 46374799 - 46374742
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||    
T  46374799 taatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 46374742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 41423682 - 41423774
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagca 166  Q
    ||||||||||||||||||||| |||| ||| ||||||||  || ||||  ||| |||||||||||| |||||||| | ||||||| |||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagca 41423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 46033776 - 46033717
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    ||||||||| |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  46033776 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttccat 46033717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacac 140  Q
    ||||||| |||||||||||||| |||||||||| |||||||   || ||||||||| |||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 35523001 - 35523058
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||||    
T  35523001 taatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttcc 35523058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 11044185 - 11044237
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacaccc 123  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 26296768 - 26296827
Alignment:
Q  198 ttaatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    ||||||||||||||||| |||| ||||||| |||| |||||||||| |||||||||||||    
T  26296768 ttaatgtatgaggtgtacaagggtgtatggaaatatatggtgtctacgtaacattttcca 26296827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 45223039 - 45223110
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgt 142  Q
    ||||||| |||||| ||| |||||||||||||||||||||  ||| |||| | ||| |||||||||||||||    
T  45223039 aaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgt 45223110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 12311046 - 12311087
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  12311046 aaaggtgtatggaaataaagggtgtctatgtaacattttcca 12311087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 21234526 - 21234583
Alignment:
Q  199 taatgtatgaggtgtaaaa-ggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| || |||||||| ||||||| |||||||||||||||||||||    
T  21234526 taatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcc 21234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 16374799 - 16374743
Alignment:
Q  199 taatgtatgaggtgta-aaaggtgtatgggaataaatggtgtctatgtaacattttc 254  Q
    |||||||||  ||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  16374799 taatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 16374894 - 16374830
Alignment:
Q  104 caatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| || || ||| ||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 44326344 - 44326301
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  44326344 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 44326301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 26898336 - 26898398
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||| || |||| ||| |||||    
T  26898336 gtggcaatacacctttta-cacccacataaaattctgacacgtggtaacctggaccccacacaa 26898398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 31736002 - 31736059
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||||||||||| ||| ||||| |||||||||||    
T  31736002 taatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaacattttcc 31736059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 40614002 - 40613908
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 42257190 - 42257287
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  42257190 aaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 5574589 - 5574494
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 38273245 - 38273148
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||| ||||||    
T  38273245 aaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 28863460 - 28863549
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 33436203 - 33436106
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  33436203 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 9058478 - 9058574
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 30915461 - 30915557
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||||| |||| |||| |||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 36168835 - 36168928
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagca 166  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||| |||||| |||||| |||||||||| |||||||| ||||||||||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 10249484 - 10249388
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||| ||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 7465836 - 7465741
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 32505749 - 32505654
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 13438343 - 13438437
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 28381755 - 28381661
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||  ||||||||| ||||||||||||||| ||||||||||  |||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 20700812 - 20700909
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| || || ||| ||||||||||||||| ||||| |||| |||||| |||||||    
T  20700812 aaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 2533123 - 2533217
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||| ||||||||||||||| | ||||| || ||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 33436210 - 33436280
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtg 143  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtg 33436280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 40701478 - 40701572
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| || || |||| ||||||||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 19930915 - 19930826
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||  |||| ||||||||| ||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 26891607 - 26891510
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||| || |||||||||||||||||||| |  ||||||||| |||||||||||| |||||||| |||| | || |||||||||    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 38882923 - 38882835
Alignment:
Q  64 taattctaaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||| ||||| ||||||||||||||| ||||| ||||    
T  38882923 taattctaaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtgga 38882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 45097838 - 45097745
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||||||||||||||||||||| || || ||||||| | |||||||||||| |||| || ||||| ||||||||||    
T  45097838 aaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 4060685 - 4060779
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||| ||||||||| ||| ||| ||||| ||||||||||||||| || || ||||||||||| |||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 27864704 - 27864798
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||| ||||||||||||||||| ||| ||||| |||||||||||||||  |||| |||| |||||| |||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| ||||||||| |||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||| |  ||||||||||||||||| || ||||||||| |||||||||||| ||||| || |||| ||| ||||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||| ||| ||||| ||| ||||||| || || ||||||||| |||||||||||| ||||||| ||||| ||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 15428842 - 15428770
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||||||||||||| ||||||||| ||||| |||||||| ||||||| |||| |||||||||||| ||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtgg 15428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 2997567 - 2997497
Alignment:
Q  94 ccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 17823782 - 17823852
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgt 142  Q
    |||||| |||||||||| |||||||||||||||||||||  | | |||||||||| |||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgt 17823852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 20700960 - 20701001
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttccattc 259  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  20700960 ggtgtatgggaataaagggtgtctatgtaacattttccattc 20701001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 40613877 - 40613820
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 40613820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 3439985 - 3440073
Alignment:
Q  80 tgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||| |||||||||||||||||| | |  ||||||||| |||||||| ||| ||| | || |||| ||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 13365348 - 13365443
Alignment:
Q  71 aaagagttatgatacatagacat--ccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| |||   |||||| |||||||| |||| || ||||||||| |||||||||||| |||  || ||||| ||||||||||    
T  13365348 aaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 13365443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 41575142 - 41575210
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtca 147  Q
    ||||||||||||||||||||| ||| |||||||||||| |||  |||| |||||| ||||| |||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtca 41575210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 44151924 - 44151995
Alignment:
Q  75 agttatgatacatagacatccttaggtggcaatacaccctttaacacccac-ataaaaatctgacacgtggt 145  Q
    |||||||||||||||||| |  |||||| |||||||| |||||||||| || | ||||||||||||||||||    
T  44151924 agttatgatacatagacaactataggtgacaatacactctttaacacctacaaaaaaaatctgacacgtggt 44151995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 38273117 - 38273060
Alignment:
Q  199 taatgtatgaggtgtaaaaggtgtatgggaataaatggtgtctatgtaacattttcca 256  Q
    ||||||||| |||||| ||| |||||| ||||||||||||| ||||||| ||||||||    
T  38273117 taatgtatggggtgtacaagatgtatgagaataaatggtgtttatgtaatattttcca 38273060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 3154197 - 3154237
Alignment:
Q  128 aaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  3154197 aaaaatctgacacgtggtcacatggatcccgcccaaacaca 3154237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 3440121 - 3440161
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  3440121 aaaggtgtatggaaataaagggtgtctatgtaacattttcc 3440161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 36168961 - 36169020
Alignment:
Q  199 taatgtatgaggtgtaaaag-gtgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    ||||||||| |||||| ||| ||||||| ||||||| ||||| |||||||||||||||||    
T  36168961 taatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacattttccat 36169020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 3737987 - 3738037
Alignment:
Q  118 acacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||| |||||||||||| |||||||  |||| ||||||||||||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 33436345 - 33436383
Alignment:
Q  217 aggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  33436345 aggtgtatgagaataaaaggtgtctatgtaacattttcc 33436383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 3738085 - 3738130
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttccattca 260  Q
    |||||||||||  |||| | ||||||||||||||||||||||||||    
T  3738085 aaaggtgtatgaaaatatagggtgtctatgtaacattttccattca 3738130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 7465710 - 7465657
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  7465710 taatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 17473145 - 17473198
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  17473145 taatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 19930795 - 19930742
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  19930795 taatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 28863580 - 28863633
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||| |||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  28863580 taatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 4e-34; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 43414681 - 43414587
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 37038478 - 37038573
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 4854965 - 4854869
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||| || |||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 10621185 - 10621093
Alignment:
Q  76 gttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| | ||||| |||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 15048281 - 15048188
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| | |||||||| ||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 5957835 - 5957924
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||| ||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 12831038 - 12831141
Alignment:
Q  65 aattctaaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||| || |||| |||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  12831038 aattcgaaggagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaag 12831137  T
Q  165 caca 168  Q
    ||||    
T  12831138 caca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 504221 - 504127
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 15197333 - 15197427
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| ||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 34012396 - 34012302
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||| |||||||| ||||| |||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 10284737 - 10284637
Alignment:
Q  68 tctaaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcac 167  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||| |||| ||||||||| |||||| |||||||| ||||| |||| |||||||||||||    
T  10284737 tctaaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcac 10284638  T
Q  168 a 168  Q
    |    
T  10284637 a 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 14547920 - 14548016
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| | |||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| ||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||  ||||| |||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 16383374 - 16383467
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  16383374 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 44507188 - 44507095
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagca 166  Q
    ||||| |||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| |||| |||| |||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 20075034 - 20074964
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 23122697 - 23122603
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| ||||| ||||||||||||| ||| ||||||||| ||||||||||||||| ||||| |||| |||||| |||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 40424043 - 40423949
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||| | ||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||  |||| ||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 34307214 - 34307306
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||| | ||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaag 34307306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 30479574 - 30479504
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtgg 30479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 16056504 - 16056411
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||||| ||||||||| ||| ||||||| || || ||||||||| |||||||||||| |||| || ||||| ||||||||||    
T  16056504 aaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 24307895 - 24307803
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| |||||||||| | |||| || ||||| ||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaag 24307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 8841512 - 8841438
Alignment:
Q  94 ccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||| |||||||||| ||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 15259031 - 15258935
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||||||| |  ||||| |||||||||| || |  ||| |||||||||||||||||| |||||||| |||| || |||||||||||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 32032724 - 32032814
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    |||||||||||||||| ||| ||||||||||||||||| || || ||| ||||| |||||||||||| |||| || |||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaag 32032814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 24307626 - 24307692
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctga 137  Q
    |||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| ||||||||||    
T  24307626 aaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 17443824 - 17443890
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgaca 139  Q
    |||||||||||||||||||| ||||||||| ||||||||   ||||||| |||| ||||||||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgaca 17443890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 42221513 - 42221609
Alignment:
Q  72 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||| |||||||||| ||||||||||||| |||||||  | |  ||||||||| |||||||||||||||  ||| ||||| |||  |||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 8841386 - 8841347
Alignment:
Q  219 gtgtatgggaataaatggtgtctatgtaacattttccatt 258  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  8841386 gtgtatgagaataaatggtgtctatgtaacattttccatt 8841347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 9122229 - 9122279
Alignment:
Q  118 acacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 42354543 - 42354506
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42354543 ggtgtatgagaataaatggtgtctatgtaacattttcc 42354506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 43414556 - 43414499
Alignment:
Q  199 taatgtatgaggtgtaaaagg-tgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    ||||||||| |||||| |||| ||||||| |||||| |||||||||||||||||||||    
T  43414556 taatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacattttcc 43414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 20148926 - 20148883
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  20148926 gtggcaatacacccttta-cacccacataaaattctgacacgtgg 20148883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 2547162 - 2547100
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||  || |||||||| |||||    
T  2547162 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccacacaa 2547100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 14055692 - 14055613
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgga 153  Q
    |||||||||||||| |||| ||||||||| |||||||| | || ||| ||||| |||||||| ||| || ||||| ||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtgga 14055613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 29705528 - 29705466
Alignment:
Q  100 gtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||  || |||| |||||||||    
T  29705528 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 9122200 - 9122234
Alignment:
Q  79 atgatacatagacatccttaggtggcaatacaccc 113  Q
    |||||||||||||| ||||||||||||||||||||    
T  9122200 atgatacatagacacccttaggtggcaatacaccc 9122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 25838196 - 25838234
Alignment:
Q  73 agagttatgatacatagacatccttaggtggcaatacac 111  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacac 25838234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 38229429 - 38229522
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    ||||||||||||||  |||  ||||||||||||||| | |  | ||||||||| |||||||||||| |||||||| ||||| | | |||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctc-ctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcaca 38229522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 3743934 - 3743894
Alignment:
Q  103 gcaatacaccctttaacacccacataaaaatctgacacgtgg 144  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  3743934 gcaatacacccttta-cacccacataaaattctgacacgtgg 3743894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 10621050 - 10621013
Alignment:
Q  220 tgtatgggaataaatggtgtctatgtaacattttccat 257  Q
    |||||||||||||| | |||||||||||||||||||||    
T  10621050 tgtatgggaataaaagatgtctatgtaacattttccat 10621013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||| || ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||| || ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 10212 - 10115
Alignment:
Q  71 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||| |||| | || |||||||||    
T  10212 aaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||| |||||||||||||| | |||| |||||||||||| ||||||||||||| ||||||||||||||| || || ||||||||||| |||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 4174 - 4207
Alignment:
Q  218 ggtgtatgggaataaatggtgtctatgtaacatt 251  Q
    ||||||||||||||||||||||||||||| ||||    
T  4174 ggtgtatgggaataaatggtgtctatgtatcatt 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 152518 - 152587
Alignment:
Q  94 ccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaa 163  Q
    |||| ||||||||||||||| || ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 17058 - 17148
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaagcaca 168  Q
    |||||||||| |||||||||    |||| |||||||| || |  ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  17058 gagttatgattcatagacat----aggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 17245 - 17285
Alignment:
Q  215 aaaggtgtatgggaataaatggtgtctatgtaacattttcc 255  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  17245 aaaggtgtatggaaataaagggtgtctatgtaacattttcc 17285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 164
Target Start/End: Complemental strand, 8963 - 8873
Alignment:
Q  74 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatggatcccgcacaag 164  Q
    ||||||||||| ||||||||||||| ||| ||||||||  ||| ||| | ||| |||||| |||||| | ||||| |||| ||| ||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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