View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7532_low_6 (Length: 286)

Name: NF7532_low_6
Description: NF7532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7532_low_6
NF7532_low_6
[»] chr7 (13 HSPs)
chr7 (3-286)||(12591342-12591626)
chr7 (2-279)||(14320276-14320554)
chr7 (246-286)||(13006749-13006789)
chr7 (235-286)||(16090452-16090503)
chr7 (248-286)||(13743027-13743065)
chr7 (2-83)||(20907266-20907349)
chr7 (2-60)||(31154554-31154611)
chr7 (246-286)||(12710543-12710583)
chr7 (246-286)||(13123614-13123654)
chr7 (3-73)||(11220033-11220101)
chr7 (1-59)||(13742689-13742746)
chr7 (172-280)||(20907071-20907180)
chr7 (2-59)||(6412007-6412064)
[»] chr2 (12 HSPs)
chr2 (3-286)||(5706722-5707005)
chr2 (2-279)||(26884340-26884617)
chr2 (2-279)||(27208355-27208633)
chr2 (2-279)||(27210690-27210968)
chr2 (172-286)||(29281298-29281414)
chr2 (3-73)||(20724221-20724289)
chr2 (1-59)||(26582859-26582916)
chr2 (2-59)||(22810068-22810125)
chr2 (2-73)||(24943564-24943634)
chr2 (177-286)||(25181538-25181648)
chr2 (239-286)||(26583158-26583205)
chr2 (2-59)||(23089965-23090022)
[»] chr1 (5 HSPs)
chr1 (1-279)||(20045596-20045872)
chr1 (2-279)||(19961322-19961600)
chr1 (246-286)||(41111257-41111297)
chr1 (2-59)||(29554377-29554435)
chr1 (2-49)||(19664074-19664121)
[»] chr6 (23 HSPs)
chr6 (3-286)||(34640687-34640969)
chr6 (3-286)||(34647361-34647643)
chr6 (3-286)||(25470402-25470682)
chr6 (1-279)||(11289316-11289595)
chr6 (4-279)||(19300381-19300657)
chr6 (2-279)||(31251557-31251832)
chr6 (3-83)||(9099910-9099991)
chr6 (3-83)||(29097000-29097081)
chr6 (246-286)||(12167680-12167720)
chr6 (246-286)||(19286589-19286629)
chr6 (246-286)||(19786567-19786607)
chr6 (246-286)||(19877773-19877813)
chr6 (3-73)||(14375231-14375299)
chr6 (2-59)||(14724552-14724610)
chr6 (2-60)||(15457651-15457708)
chr6 (2-60)||(15464246-15464303)
chr6 (248-286)||(29614846-29614884)
chr6 (2-73)||(14616191-14616261)
chr6 (3-60)||(19588514-19588571)
chr6 (1-38)||(29615155-29615192)
chr6 (250-286)||(18799832-18799868)
chr6 (246-286)||(19883549-19883589)
chr6 (1-40)||(19786825-19786864)
[»] chr4 (10 HSPs)
chr4 (1-282)||(11847237-11847518)
chr4 (122-283)||(53482895-53483056)
chr4 (2-132)||(27905398-27905527)
chr4 (239-286)||(8046531-8046578)
chr4 (3-73)||(15325062-15325130)
chr4 (2-59)||(1650990-1651047)
chr4 (2-59)||(15407097-15407154)
chr4 (235-286)||(16147468-16147519)
chr4 (2-73)||(14485697-14485767)
chr4 (1-36)||(8046855-8046890)
[»] scaffold0261 (1 HSPs)
scaffold0261 (2-279)||(24214-24492)
[»] scaffold0453 (1 HSPs)
scaffold0453 (32-279)||(11196-11440)
[»] chr5 (6 HSPs)
chr5 (2-279)||(34829216-34829494)
chr5 (2-83)||(20772105-20772187)
chr5 (2-83)||(20780880-20780962)
chr5 (3-83)||(24930767-24930848)
chr5 (2-73)||(6728179-6728249)
chr5 (246-286)||(23527947-23527987)
[»] scaffold0483 (1 HSPs)
scaffold0483 (2-191)||(11744-11932)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-279)||(493672-493948)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-191)||(72416-72603)
[»] scaffold0720 (1 HSPs)
scaffold0720 (2-279)||(3904-4182)
[»] chr3 (6 HSPs)
chr3 (239-286)||(41455798-41455845)
chr3 (3-83)||(19235907-19235988)
chr3 (32-83)||(12034254-12034303)
chr3 (250-286)||(24192274-24192310)
chr3 (2-49)||(18900193-18900240)
chr3 (235-279)||(14865211-14865255)
[»] scaffold0206 (1 HSPs)
scaffold0206 (2-279)||(17819-18099)
[»] scaffold0706 (1 HSPs)
scaffold0706 (2-73)||(3248-3318)
[»] scaffold0634 (2 HSPs)
scaffold0634 (239-286)||(3044-3091)
scaffold0634 (1-59)||(2750-2807)
[»] chr8 (7 HSPs)
chr8 (239-286)||(23865923-23865970)
chr8 (2-59)||(10607120-10607178)
chr8 (6-59)||(20973956-20974009)
chr8 (2-59)||(22175993-22176050)
chr8 (3-73)||(41009380-41009448)
chr8 (246-280)||(17053928-17053962)
chr8 (2-59)||(22063521-22063578)
[»] scaffold0348 (1 HSPs)
scaffold0348 (2-83)||(8492-8575)
[»] scaffold0023 (3 HSPs)
scaffold0023 (2-59)||(153275-153332)
scaffold0023 (2-59)||(20452-20509)
scaffold0023 (173-280)||(134774-134882)
[»] scaffold0456 (2 HSPs)
scaffold0456 (240-280)||(367-407)
scaffold0456 (240-280)||(7512-7552)
[»] scaffold0097 (1 HSPs)
scaffold0097 (3-73)||(28050-28118)
[»] scaffold0085 (1 HSPs)
scaffold0085 (32-83)||(4509-4559)
[»] scaffold0053 (1 HSPs)
scaffold0053 (235-286)||(80128-80179)
[»] scaffold0342 (1 HSPs)
scaffold0342 (2-59)||(16824-16882)
[»] scaffold0249 (1 HSPs)
scaffold0249 (2-60)||(14730-14787)
[»] scaffold0203 (1 HSPs)
scaffold0203 (2-59)||(17036-17094)
[»] scaffold0004 (2 HSPs)
scaffold0004 (2-59)||(326959-327017)
scaffold0004 (2-59)||(321250-321308)
[»] scaffold0664 (1 HSPs)
scaffold0664 (2-59)||(2318-2375)
[»] scaffold0301 (1 HSPs)
scaffold0301 (2-59)||(13348-13405)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-59)||(4994-5051)
[»] scaffold0026 (1 HSPs)
scaffold0026 (239-280)||(12534-12575)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-59)||(71275-71332)
scaffold0025 (250-286)||(15085-15121)
[»] scaffold1773 (2 HSPs)
scaffold1773 (246-286)||(496-536)
scaffold1773 (1-36)||(156-191)
[»] scaffold0323 (1 HSPs)
scaffold0323 (2-58)||(7435-7491)
[»] scaffold0117 (1 HSPs)
scaffold0117 (246-286)||(9275-9315)
[»] scaffold0126 (1 HSPs)
scaffold0126 (2-57)||(44379-44434)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-36)||(110942-110977)
[»] scaffold0574 (1 HSPs)
scaffold0574 (2-59)||(5835-5893)
[»] scaffold0154 (2 HSPs)
scaffold0154 (2-60)||(29932-29990)
scaffold0154 (107-279)||(30138-30311)
[»] scaffold0226 (1 HSPs)
scaffold0226 (2-59)||(5334-5391)


Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 12591626 - 12591342
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12591626 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 12591527  T
Q  103 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacaca 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  12591526 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgttttaagtaggattagatacctaaacaagagttattcaagctaaggaaacacaca 12591427  T
Q  203 ag-agtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12591426 agaagtactaaaaggagtcccctagctcacgaacaaggttcagaaaaacgctgactaaggttcacttcgcttaagcgacggctag 12591342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 14320554 - 14320276
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| || ||||||||||||| ||| ||||||||||||| ||||||||    | ||   | |     
T  14320554 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttttatgactcaccacccct-ttaatgcaacatgatcattcactcgatccaagtacta 14320456  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaagg-aaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | |||  ||||| |||| ||||| ||| |||| ||||||||||||||||||||   ||||    
T  14320455 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-catcgtgttttaagtaggatttgatgcctatacaagagttatacaagctaaaacaaac 14320359  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    ||  |  |||||| ||| |||||||||||  || ||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  14320358 acttagaagtactcaaaagggtcccctagtgcaggaaacaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 14320276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 13006749 - 13006789
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  13006749 aaaaggctgattaaggttcacttcgcttaagcgacggctag 13006789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 16090452 - 16090503
Alignment:
Q  235 caaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  16090452 caaggttcagaaaaaggctgactaacactcagttcgcttaagcgacggctag 16090503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 286
Target Start/End: Original strand, 13743027 - 13743065
Alignment:
Q  248 aaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13743027 aaggctgactaaggctcacttcgcttaagcgacggctag 13743065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 20907349 - 20907266
Alignment:
Q  2 tgtgtatatctacatacaactcta---ctattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||||||||||||||||| |   | | | |||||||| |||||||||||||||| ||| |||||||||||| |||||||||    
T  20907349 tgtgtatatctacatacaactcaatgacaaatgcatatgtacttatatgactcaccac-ccttttaatgcaacatattcattcac 20907266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 31154554 - 31154611
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    |||||||||||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  31154554 tgtgtatatctacatacaactcgacaatg-catatgtacttatatgactcaccactcct 31154611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 12710583 - 12710543
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  12710583 aaaaggctgactaagactcacttcgcttaagcgacggctag 12710543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 13123654 - 13123614
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  13123654 aaaaggctgactaagactcacttcgcttaagcgacggctag 13123614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 11220101 - 11220033
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | | || |||||||||| |||||||||||||  |||||||||||||    
T  11220101 gtgtatatctacatacaactccaacaatgcacatgtatttatctgactcaccactc--cttaatgcaacat 11220033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13742689 - 13742746
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||| ||||||||||| |||||||||||||| || |||||||| || |||||    
T  13742689 ctgtgtatatcaacatacaactcgactattacatatgt-ttcatatgacttactactcc 13742746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 20907180 - 20907071
Alignment:
Q  172 acaagagttatacaagctaag-gaaacacacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttc 269  Q
    ||||| ||||||||||||||| |||||||  |  |||||| ||| |||||||||||  |||||| |||| |||||| || |||||||||| | ||| |||    
T  20907180 acaagggttatacaagctaagagaaacacctagaagtactcaaaagggtcccctagtgcacgaagcaagattcagataa-ggctgactaacgctcagttc 20907082  T
Q  270 gcttaagcgac 280  Q
    |||||||||||    
T  20907081 gcttaagcgac 20907071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 6412007 - 6412064
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||| ||||||||    
T  6412007 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgacttaccactcc 6412064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 5707005 - 5706722
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 102  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5707005 gtgtatatctacatacaactctactattacatatatattaatatgactcatcacttctcttaatgcaacatgttcattcacctagttcacacatttcaac 5706906  T
Q  103 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacaca 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  5706905 atctccaaaaattcataggaatcaaccaaaccattcatcattatgtttaaagtaggattagatacctaaacaagagttatacaagctaaggaaacacata 5706806  T
Q  203 ag-agtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    || ||||| |||||||||| |||||||||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5706805 agaagtacaaaaaggggtctcctagctcacaagcagggttcag-aaaaggctgactaaggttcacttcgcttaagcgacggctag 5706722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 26884340 - 26884617
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| |||||||||||||||| ||| ||||||||||||||| |||||| |  ||||   | ||    
T  26884340 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttatatgactcaccacccct-ttaatgcaacatgtttattcacttgattcaagtactt 26884438  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||| | |||||||||| |||| |||||| | ||| | |||   |||| |||| ||||| ||| |||| ||||||||||||||||||||  |||||    
T  26884439 caacatcttccaaaattcata-aaattaaccaatcaattaa-catc--gttttaagtaggatttgatgcctatacaagagttatacaagctaaaagaaac 26884534  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |   || | |||| ||| |||||||||||  |||||| ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  26884535 atttaaaaatactcaaaagggtcccctagtgcacgaagcaaggttcagaaagaggctgactaaggctcagttcgcttaagcga 26884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 27208633 - 27208355
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| || ||||||||||||| ||| ||||| ||||||| ||||||||    ||||   | |     
T  27208633 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttttatgactcaccacccct-ttaatacaacatgatcattcactcgattcaagtacta 27208535  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | |||  ||||| |||| ||||| ||| |||| ||||||||||||||||||||  |||||    
T  27208534 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-catcgtgttttaagtaggatttgatgcctatacaagagttatacaagctaaaagaaac 27208438  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    ||  |  ||||||  || |||||||||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  27208437 acttagcagtactcgaaagggtcccctagtgcacgaaacaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 27208355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 27210968 - 27210690
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| || ||||||||||||| ||| ||||| ||||||| ||||||||    ||||   | |     
T  27210968 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttttatgactcaccacccct-ttaatacaacatgatcattcactcgattcaagtacta 27210870  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | |||  ||||| |||| ||||| ||| |||| ||||||||||||||||||||  |||||    
T  27210869 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-catcgtgttttaagtaggatttgatgcctatacaagagttatacaagctaaaagaaac 27210773  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    ||  |  ||||||  || |||||||||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  27210772 acttagcagtactcgaaagggtcccctagtgcacgaaacaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 27210690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 286
Target Start/End: Original strand, 29281298 - 29281414
Alignment:
Q  172 acaagagttatacaagctaag-gaaacacacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttc 269  Q
    ||||| ||||||||||||||  |||||||  |  |||||| ||| || |||| |||  |||||| |||||||||||||||||||||||||   ||| |||    
T  29281298 acaagggttatacaagctaaaagaaacacctagaagtactcaaaaggatcccttagtgcacgaagcaaggttcagaaaaaggctgactaacactcagttc 29281397  T
Q  270 gcttaagcgacggctag 286  Q
    |||||||||||||||||    
T  29281398 gcttaagcgacggctag 29281414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 20724221 - 20724289
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | | |||||||||| ||||||||||||||||  |||||||||||||    
T  20724221 gtgtatatctacatacaactccaacaatgcatatgtattcatatgactcaccactc--cttaatgcaacat 20724289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26582859 - 26582916
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||| || |||||    
T  26582859 ctgtgtatatctacatacaacttaactattacatatgt-tttatatgacttactactcc 26582916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 22810068 - 22810125
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||||    
T  22810068 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgactcaccactcc 22810125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 24943564 - 24943634
Alignment:
Q  2 tgtgtatatctacatacaactctactat-tacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    |||||||||||||||||||||| |  |  | |||||||||||||||||||||||||||  |||||||||||||    
T  24943564 tgtgtatatctacatacaactccaaaaaatgcatatgtatttatatgactcaccactc--cttaatgcaacat 24943634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 286
Target Start/End: Complemental strand, 25181648 - 25181538
Alignment:
Q  177 agttatacaagctaag-gaaacacacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgctta 274  Q
    ||||| |||||||||| |||||||  |  |||||| ||| |||||||||||  |||||| |||| ||||||||| ||||||||||   ||| ||||||||    
T  25181648 agttacacaagctaagagaaacacctagaagtactcaaaagggtcccctagtgcacgaagcaagattcagaaaa-ggctgactaacactcagttcgctta 25181550  T
Q  275 agcgacggctag 286  Q
    ||||||||||||    
T  25181549 agcgacggctag 25181538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 26583158 - 26583205
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||| |||||||||||||  | ||||||||||||||||||||||    
T  26583158 gttcagaagaaggctgactaagacttacttcgcttaagcgacggctag 26583205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 23090022 - 23089965
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| |||| | ||||| | | |||||||||||| |||||    
T  23090022 tgtgtatatctacatacaactcaactaatgcatatttgtatatatgactcacaactcc 23089965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 20045872 - 20045596
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20045872 ctgtgtatatctacatacaactatactattacgtatgtatttatatgactcaccactcctctaaatgcaacatgttcattcacctagttcacacatttca 20045773  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacaca 200  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  20045772 acatctccaaaaattcatagaaatcaatcaaaccatt-atcattatgtttaaa-taggattagatacctaaacaagagttatacaagctaaggaaacaca 20045675  T
Q  201 caa-gagtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
     || || |||||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||| |||||||||||||    
T  20045674 taaggaatactaaaaggggtcccctagctcacgaacaaggttcag-aaaaggctggctaaagctcagttcgcttaagcga 20045596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 19961322 - 19961600
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    ||||||||||||||||||||| | || | | |||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||   | ||||    
T  19961322 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcgccaccccttttaatgcaacatgttcattcacttagttcaagtacttca 19961421  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagct-aaggaaacac 199  Q
    |||||||| |||||||||| |||| ||||||| || | |||||| ||||| |||| ||||| ||| |||| ||||| |||||||||||| || |||||||    
T  19961422 acatctcc-aaaattcataaaaattaaccaaatcaattatcattgtgttt-aagtaggatttgatgcctatacaagggttatacaagctaaaagaaacac 19961519  T
Q  200 acaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
      || | |||| ||| |||||||||||  |||||| ||| ||||||| | ||||||||||||| |||  ||||||||||||    
T  19961520 gtaaaaatactcaaaagggtcccctagtgcacgaagcaaagttcagatagaggctgactaaggctcatctcgcttaagcga 19961600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 41111257 - 41111297
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  41111257 aaaaggctgattaaggttcacttcgcttaagcgacggctag 41111297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 29554435 - 29554377
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||    
T  29554435 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactcc 29554377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 19664121 - 19664074
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgac 49  Q
    |||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  19664121 tgtgtatatctacatacaactcaactaatgcatatgtatatatatgac 19664074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 34640969 - 34640687
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 102  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  34640969 gtgtatatctacatacaactctactatcacatatatattaatatgactcatcac-cctctcaatgcaacatgttcattcacttagttcacacatttcaac 34640871  T
Q  103 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacaca 202  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  34640870 acccccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtaggattagatacctaaacaagagttatacaagctaaggaaacacata 34640771  T
Q  203 ag-agtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    || ||||| |||||||||| |||||||||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34640770 agaagtacaaaaaggggtctcctagctcacaagcagggttcag-aaaaggctgactaaggttcacttcgcttaagcgacggctag 34640687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 34647643 - 34647361
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 102  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  34647643 gtgtatatctacatacaactctactatcacatatatattaatatgactcatcac-cctctcaatgcaacatgttcattcacttagttcacacatttcaac 34647545  T
Q  103 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacaca 202  Q
    | | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  34647544 acccccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtaggattagatacctaaacaagagttatacaagctaaggaaacacata 34647445  T
Q  203 ag-agtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    || ||||| |||||||||| |||||||||| | || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34647444 agaagtacaaaaaggggtctcctagctcacaagcagggttcag-aaaaggctgactaaggttcacttcgcttaagcgacggctag 34647361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 3 - 286
Target Start/End: Complemental strand, 25470682 - 25470402
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtattt-atatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaa 101  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  25470682 gtgtatacctacatacaactctactaatacatatgtattttatatgactcaccactcctcttaatgcaacatgttcattcatctagttcacacttttcaa 25470583  T
Q  102 catctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacac 201  Q
    |||||||  || || ||| ||||| | |||| |||| ||||||||||||| | | |||||||| | || |||||| ||||||||||||||| | ||||||    
T  25470582 catctccgcaagtt-atataaatcgatcaaatcatt-atcattatgtttaca-taggattaga-aacttaacaagggttatacaagctaagaagacacac 25470487  T
Q  202 aa-gagtactaaaaggggtcccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    || || ||||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25470486 aaggaatactaaaagaggtcccctagcttacgagcaa-gttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctag 25470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 11289595 - 11289316
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| | ||||    
T  11289595 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactccttttaatgcaacatgttcattcacttaattcacatacttca 11289496  T
Q  101 acatctccaaaaattcatagaaa-tcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagct-aaggaaaca 198  Q
    |||||||| |||||||||||||| ||||||||| || | |||||   |||| |||| | || | ||||||| ||| |||||||||||||| |||||||||    
T  11289495 acatctcc-aaaattcatagaaagtcaaccaaatcaattatcatggggttt-aagtagaatcaaatacctatacaggagttatacaagctaaaggaaaca 11289398  T
Q  199 cacaagagtactaaaaggggtcccctagctcacga-acaaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |  || | |||| ||| |||||||||||  |||||  ||| |||||||||  ||||| |||||| |||  ||||||||||||    
T  11289397 cttaaaattacttaaaagggtcccctagtgcacgaggcaaagttcagaaaggggctggctaaggctcagctcgcttaagcga 11289316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 279
Target Start/End: Complemental strand, 19300657 - 19300381
Alignment:
Q  4 tgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaac 102  Q
    ||||||||||||||||||| | || | | |||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||   | ||||||    
T  19300657 tgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcgccaccccttttaatgcaacatgttcattcacttagttcaagtacttcaac 19300558  T
Q  103 atctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagct-aaggaaacacac 201  Q
    |||||| |||||||||| |||| ||||||| || | |||||| ||||| |||| ||||| ||| |||| ||||| |||||||||||| || |||||||      
T  19300557 atctcc-aaaattcataaaaattaaccaaatcaattatcattgtgttt-aagtaggatttgatgcctatacaagggttatacaagctaaaagaaacactt 19300460  T
Q  202 aagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    || | |||| ||| |||||||||||  |||||| ||| ||||||| | ||||||||||||| |||  ||||||||||||    
T  19300459 aaaaatactcaaaagggtcccctagtgcacgaagcaaagttcagatagaggctgactaaggctcatctcgcttaagcga 19300381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 31251557 - 31251832
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttc-acacatttca 100  Q
    |||||||||||||||||||||| || | | |||||||| |||||||||||||||| ||| |||||||||||||||||||||| |  ||| |   | | ||    
T  31251557 tgtgtatatctacatacaactcaacaaatgcatatgtacttatatgactcaccacccct-ttaatgcaacatgttcattcacttgattcaagtaactaca 31251655  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacaca 200  Q
    |||||||| |||||||||| |||| |||||| | ||| | |||  ||||  ||||  |||| ||| | || |||||||||||||||||||||| |||||     
T  31251656 acatctcc-aaaattcata-aaattaaccaatcaatt-aacatcgtgttataagtaagatttgatgcttatacaagagttatacaagctaagggaacacc 31251752  T
Q  201 caagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
     |  |||||| ||| ||| ||||||   |||||| ||||||||| ||||||| |||||||||  || ||||||| |||||    
T  31251753 tagaagtactcaaaagggacccctattgcacgaagcaaggttcaaaaaaaggttgactaaggcccagttcgcttgagcga 31251832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 9099991 - 9099910
Alignment:
Q  3 gtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    ||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  9099991 gtgtatatctacatacaactcaacgactaatgcatatgtactcatatgactcaccactcct--taatgcaacatgttcattcac 9099910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 29097000 - 29097081
Alignment:
Q  3 gtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    ||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  29097000 gtgtatatctacatacaactcaacgactaatgcatatgtactcatatgactcaccactcct--taatgcaacatgttcattcac 29097081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 12167680 - 12167720
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  12167680 aaaaggctgattaaggttcacttcgcttaagcgacggctag 12167720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 19286589 - 19286629
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19286589 aaaaggctgattaaggttcacttcgcttaagcgacggctag 19286629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 19786607 - 19786567
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19786607 aaaaggctgattaaggttcacttcgcttaagcgacggctag 19786567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 19877773 - 19877813
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19877773 aaaaggctgattaaggttcacttcgcttaagcgacggctag 19877813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 14375299 - 14375231
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | |  ||||||||||||||||||||||||||  |||||||||||||    
T  14375299 gtgtatatctacatacaactccaacaatgtatatgtatttatatgactcaccactc--cttaatgcaacat 14375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 14724552 - 14724610
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||    
T  14724552 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactcc 14724610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 15457651 - 15457708
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    |||||||||||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  15457651 tgtgtatatctacatacaactcaacaatg-catatgtacttatatgactcaccactcct 15457708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 15464246 - 15464303
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    |||||||||||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  15464246 tgtgtatatctacatacaactcaacaatg-catatgtacttatatgactcaccactcct 15464303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 29614884 - 29614846
Alignment:
Q  248 aaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  29614884 aaggctgactaaggctcacttcgcttaagcgacggctag 29614846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 14616261 - 14616191
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    |||||||||||||||||||||| | | | | ||||||||| |||||||||||||||||  |||||||||||||    
T  14616261 tgtgtatatctacatacaactccaacaaatgcatatgtatctatatgactcaccactc--cttaatgcaacat 14616191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 19588571 - 19588514
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    ||||||||||||||||||||| |  | | ||||||||||||||||||||||| |||||    
T  19588571 gtgtatatctacatacaactccaacaatgcatatgtatttatatgactcacctctcct 19588514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29615192 - 29615155
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgt 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  29615192 ctgtgtatatctacatacaactcgactattacatatgt 29615155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 18799832 - 18799868
Alignment:
Q  250 ggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||| ||||||||||||||||||||||    
T  18799832 ggctgactaaggttgacttcgcttaagcgacggctag 18799868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 19883549 - 19883589
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  19883549 aaaaggctaattaaggttcacttcgcttaagcgacggctag 19883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19786864 - 19786825
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtat 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  19786864 ctgtgtatatctacatacaactcgactactacatatgtat 19786825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 11847237 - 11847518
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||    
T  11847237 ctgtgtatatcttcatacaactcgactattatatatgtatatatatgactcaccactccttttaatgcaacatgttcattcacttagttcacatacttca 11847336  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagcta-aggaaacac 199  Q
    |||||||| ||||||||||||||||||||||| || | |||||| ||||| |||| |||| ||||||||| ||||||||||||||||||| | |||||||    
T  11847337 acatctcc-aaaattcatagaaatcaaccaaatcaattatcattgtgttt-aagtaggatcagatacctatacaagagttatacaagctagaagaaacac 11847434  T
Q  200 acaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacgg 282  Q
      |  | |||| ||| |||||||||||  ||| || ||| ||||||||| ||||||||||||| |||  |||||||||||||||    
T  11847435 ttacaaatactcaaaagggtcccctagtgcacaaagcaaagttcagaaagaggctgactaaggctcagctcgcttaagcgacgg 11847518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 53482895 - 53483056
Alignment:
Q  122 aatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaaggaaacacacaag-agtactaaaaggggtc 220  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  53482895 aatcaaccaaaccattcatcattatgtttaaagtaggattagatacctaaacaagagttatacaagctaaggaaacacataagaagtacaaaaaggggtc 53482994  T
Q  221 ccctagctcacgaacaaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggc 283  Q
     |||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  53482995 tcctagctcacaagcagggttcag-aaaaggctgactaaggttcacttcgcttaagcgacggc 53483056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 27905398 - 27905527
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    ||||||||||||||||||||| | || | | ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||   | ||||    
T  27905398 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcaccacccct-ttaatgcaacatgttcattcacttagttcaagtacttca 27905496  T
Q  101 acatctccaaaaattcatagaaatcaaccaaa 132  Q
    |||||||| |||||||||| |||| |||||||    
T  27905497 acatctcc-aaaattcataaaaattaaccaaa 27905527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 8046578 - 8046531
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  8046578 gttcagaaaaaggctgactaaggctcacttcgcttaagcgacgtctag 8046531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 15325062 - 15325130
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | | |||||||||||||||||||||||||||  |||||||||||||    
T  15325062 gtgtatatctacatacaactccaacaatgcatatgtatttatatgactcaccactc--cttaatgcaacat 15325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1651047 - 1650990
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||||| |||||||| |||| | |||||||| |||||||||||||||||||    
T  1651047 tgtgtatatctacttacaactccactaatgcatatgtacttatatgactcaccactcc 1650990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 15407097 - 15407154
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| |  | | ||||||||||||||||||||||||||||    
T  15407097 tgtgtatatctacatacaactccaacaatgcatatgtatttatatgactcaccactcc 15407154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 16147519 - 16147468
Alignment:
Q  235 caaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  16147519 caaggttcagaaaaaggctgactaacactcagttcgcttaagcgacggctag 16147468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 14485697 - 14485767
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| | || | | ||||||||||||||||||||||||  || |||||||||||||    
T  14485697 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcacca--ccccttaatgcaacat 14485767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 8046890 - 8046855
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatat 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8046890 ctgtgtatatctacatacaactcgactattacatat 8046855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 24492 - 24214
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    ||||||||||||||||||||| | || | | |||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||   | ||||    
T  24492 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcgccaccccttttaatgcaacatgttcattcacttagttcaagtacttca 24393  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagct-aaggaaacac 199  Q
    |||||||| |||||||| | |||| |||||||  | |||||||| ||||| |||| ||||| ||| |||| ||||| |||||||||||| || |||||||    
T  24392 acatctcc-aaaattcagaaaaattaaccaaattaatcatcattgtgttt-aagtaggatttgatgcctacacaagggttatacaagctaaaagaaacac 24295  T
Q  200 acaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
      || |  ||| ||| |||||||||||  |||||| ||| ||||||||| || |||||||||| |||  ||||||||||||    
T  24294 ttaaaaacactcaaaagggtcccctagtgcacgaagcaaagttcagaaagagactgactaaggctcatctcgcttaagcga 24214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 279
Target Start/End: Complemental strand, 11440 - 11196
Alignment:
Q  32 catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttcaacatctccaaaaattcatagaaatcaaccaa 131  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||| |  ||||   | |||||||||||||||| |||||| |||| ||||||    
T  11440 catatgtatttatatgactcaccacccct-ttaatgcaacatgttcattcacttgattcaagtacttcaacatctccaaaa-ttcata-aaattaaccaa 11344  T
Q  132 accattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaagg-aaacacacaagagtactaaaaggggtcccctagctca 230  Q
     | ||| | |||  ||||||| || ||||| ||| |||| ||||||||||||||||||||   ||||||  || |||||| ||| |||||||||||  ||    
T  11343 tcaattaa-catcgtgtttaa-gtaggatttgatgcctatacaagagttatacaagctaaaataaacacttaaaagtactcaaaagggtcccctagtgca 11246  T
Q  231 cgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  11245 cgaagcaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 34829216 - 34829494
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctctt-aatgcaacatgttcattcacctagttcacacatttc 99  Q
    ||||||||||||||||||||| | || | | |||||||||| |||||||||||||||||| || |||||||||||||||||||| |  ||||   | |||    
T  34829216 tgtgtatatctacatacaacttcaacaaatgcatatgtatt-atatgactcaccactcctttttaatgcaacatgttcattcacttgattcaagtacttc 34829314  T
Q  100 aacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaaca 198  Q
    ||||||||||||| |||||| |||| ||||||| || | | |||  ||||||| || ||||| ||| |||| ||||||||||||||| ||||  ||||||    
T  34829315 aacatctccaaaa-ttcataaaaattaaccaaatcaattaacatcgtgtttaa-gtaggatttgatgcctatacaagagttatacaatctaaaagaaaca 34829412  T
Q  199 cacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |  |  |||||||||| |||||||||||  |||||| ||| ||||||||||||| ||||||||| ||| |||||||||||||    
T  34829413 cttagaagtactaaaaagggtcccctagtgcacgaagcaaagttcagaaaaaggttgactaaggctcagttcgcttaagcga 34829494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 20772105 - 20772187
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  20772105 tgtgtatatctacatacaactcaacgactaatgcatatgtactaatatgactcaccactcct--taatgcaacatgttcattcac 20772187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 20780880 - 20780962
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  20780880 tgtgtatatctacatacaactcaacaactaatgcatatgtactaatatgactcaccactcct--taatgcaacatgttcattcac 20780962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 24930848 - 24930767
Alignment:
Q  3 gtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    ||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  24930848 gtgtatatctacatacaactcaacgactaatgcatatgtactcatatgactcaccactcct--taatgcaacatgttcattcac 24930767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 6728249 - 6728179
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    |||||||||||||||||||||| | | | | |||||||||||||||||||||||||||  |||||||||||||    
T  6728249 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactc--cttaatgcaacat 6728179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 23527947 - 23527987
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  23527947 aaaaggctgattaaggttcacttcgcttaagcgacggctag 23527987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 191
Target Start/End: Complemental strand, 11932 - 11744
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    ||||||||||||||||||||| | || | | ||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||||||   |  |||    
T  11932 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcaccaccccttttaatgcaacatattcattcacttagttcaagtacatca 11833  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaa 191  Q
    |||||||| |||||||||| |||| ||||||| || | |||||| ||||| |||| ||||| ||| |||| ||||| ||||||||||||||    
T  11832 acatctcc-aaaattcataaaaattaaccaaatcaattatcattgtgttt-aagtaggatttgatgcctatacaagggttatacaagctaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 493948 - 493672
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| |||||||||||||||| |||  |||||||||||||| |||||| |  ||||   | ||    
T  493948 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttatatgactcaccacccct--taatgcaacatgtttattcacttgattcaagtactt 493851  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | |||  ||||||| || ||||| ||| |||| ||||||||||||||||||||  |||||    
T  493850 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-catcgtgtttaa-gtaggatttgatgcctatacaagagttatacaagctaaaagaaac 493755  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |   || | |||| ||| |||||||||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  493754 atttaaaaatactcaaaagggtcccctagtgcacgaagcaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 493672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 191
Target Start/End: Original strand, 72416 - 72603
Alignment:
Q  2 tgtgtatatctacatacaact-ctactattacatatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacatttca 100  Q
    ||||||||||||||||||||| | || | | ||||||||||||||||||||| ||| ||| ||||| |||||||||||||||| |||||||   | ||||    
T  72416 tgtgtatatctacatacaacttcaacaaatgcatatgtatttatatgactcaacacccct-ttaatacaacatgttcattcacttagttcaagtacttca 72514  T
Q  101 acatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaa 191  Q
    |||||||| |||||||||| |||| ||||||| || | |||||| |||||  ||| ||||| ||||| || ||||| |||||| |||||||    
T  72515 acatctcc-aaaattcataaaaattaaccaaatcaattatcattgtgttt-cagtaggatttgatacttatacaagggttatataagctaa 72603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 4182 - 3904
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| |||||||||||||||| ||| ||||||||||| |||||||||| |  ||||   | ||    
T  4182 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttatatgactcaccacccct-ttaatgcaacaagttcattcacttgattcaagtactt 4084  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | | |  ||||| |||| ||||| |||  ||| |||| ||||||| |||||||  |||||    
T  4083 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-cttcgtgttttaagtaggatttgatgtctatacaatagttatataagctaaaagaaac 3987  T
Q  198 acacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    ||  |  |||||| ||| |||||||||||  |||||| ||||||||| ||||||||||||||| | ||| |||||||||||||    
T  3986 acttagaagtactcaaaagggtcccctagtgcacgaagcaaggttcaaaaaaaggctgactaatgctcagttcgcttaagcga 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 41455845 - 41455798
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455845 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 41455798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 19235988 - 19235907
Alignment:
Q  3 gtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    ||||||||||||||||||||| || | ||   |||||||| | ||||||||||||||||||  |||||||||||||||||||||    
T  19235988 gtgtatatctacatacaactcaacgactaatgcatatgtactcatatgactcaccactcct--taatgcaacatgttcattcac 19235907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 12034303 - 12034254
Alignment:
Q  32 catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||| |||||||||||||||| |||  |||||||||||||||||||||    
T  12034303 catatgtacttatatgactcaccacccct--taatgcaacatgttcattcac 12034254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 24192274 - 24192310
Alignment:
Q  250 ggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctag 24192310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 18900193 - 18900240
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgac 49  Q
    |||||||||||||||||||||| |||| | ||||||||| ||||||||    
T  18900193 tgtgtatatctacatacaactcaactaatgcatatgtatatatatgac 18900240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 14865211 - 14865255
Alignment:
Q  235 caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |||||||||||||||||||||||||   ||| |||||||||||||    
T  14865211 caaggttcagaaaaaggctgactaacactcagttcgcttaagcga 14865255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 17819 - 18099
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcacctagttcacacattt 98  Q
    |||||||||||||||||||||| || |  |   |||||||| |||||||||||||||| |||  |||||||||||||| |||||| |  ||||     ||    
T  17819 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttatatgactcaccacccct--taatgcaacatgtttattcacttgattcaagttctt 17916  T
Q  99 caacatctccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagctaag-gaaac 197  Q
    |||||||||||||| |||||| |||| |||||| | ||| | |||  ||||||| || ||||| ||| |||| || |||||||||||||||||  |||||    
T  17917 caacatctccaaaa-ttcata-aaattaaccaatcaattaa-catcgtgtttaa-gtaggatttgatgcctataccagagttatacaagctaaaagaaac 18012  T
Q  198 ac----acaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
    |     | || | |||| ||| |||||| ||||  |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  18013 atttaaaaaaaaatactcaaaagggtcctctagtgcacgaagcaaggttcagaaaaaggctgactaaggctcagttcgcttaagcga 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 3318 - 3248
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    |||||||||||||||||||||| | | | |||||||||||||||||||||||||||||  |||||||||||||    
T  3318 tgtgtatatctacatacaactccaacaaatacatatgtatttatatgactcaccactc--cttaatgcaacat 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 3044 - 3091
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  3044 gttcagaaagaggctgactaaggctcacttcgcttaagcgacggctag 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2750 - 2807
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||||||||||||||| |||| ||||||||| || |||||||| || |||||    
T  2750 ctgtgtatatctacatacaactcaactaatacatatgt-ttcatatgacttactactcc 2807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 23865923 - 23865970
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  23865923 gttcagaaaaaggctgactaagactcacttcgcttaagcgacggctag 23865970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 10607120 - 10607178
Alignment:
Q  2 tgtgtatatctacatacaactct-actattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||||||||||||||  || | | ||||||||||||||||||||||||||||    
T  10607120 tgtgtatatctacatacaactccgacaaatgcatatgtatttatatgactcaccactcc 10607178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 20974009 - 20973956
Alignment:
Q  6 tatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||| |  | | ||||||||||||||||||||||||||||    
T  20974009 tatatctacatacaactccaacaatgcatatgtatttatatgactcaccactcc 20973956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 22176050 - 22175993
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||||    
T  22176050 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgactcaccactcc 22175993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 41009448 - 41009380
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | | |||||| ||| ||||||||||||||||  |||||||||||||    
T  41009448 gtgtatatctacatacaactccaacaatgcatatgcattcatatgactcaccactc--cttaatgcaacat 41009380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 280
Target Start/End: Original strand, 17053928 - 17053962
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgac 280  Q
    |||||||||| ||||||||||||||||||||||||    
T  17053928 aaaaggctgattaaggttcacttcgcttaagcgac 17053962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 22063578 - 22063521
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| ||   | ||||| ||| ||||||||||||||||||    
T  22063578 tgtgtatatctacatacaactcaacctatgcatatatatgtatatgactcaccactcc 22063521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 8492 - 8575
Alignment:
Q  2 tgtgtatatctacatacaactctactatta---catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||||||||||||||||| || |  |   |||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  8492 tgtgtatatctacatacaactcaacaacaaatgcatatgtacttatatgactcaccac-ccttttaatgcaacatgttcattcac 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 153332 - 153275
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| |  | | ||||||||||||||||||||||||||||    
T  153332 tgtgtatatctacatacaactccaacaatgcatatgtatttatatgactcaccactcc 153275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 20509 - 20452
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| ||   | ||||| ||| ||||||||||||||||||    
T  20509 tgtgtatatctacatacaactcaacctatgcatatatatgtatatgactcaccactcc 20452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 280
Target Start/End: Original strand, 134774 - 134882
Alignment:
Q  173 caagagttatacaagctaag-gaaacacacaagagtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcg 270  Q
    |||| ||||||| ||||||| |||||||  |  |||||| ||| |||||||||||  |||||| |||| ||||||||| |||||||||| | ||| ||||    
T  134774 caagggttataccagctaagagaaacacttagaagtactcaaaagggtcccctagtgcacgaagcaagattcagaaaa-ggctgactaacgctcagttcg 134872  T
Q  271 cttaagcgac 280  Q
    ||||||||||    
T  134873 cttaagcgac 134882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 367 - 407
Alignment:
Q  240 ttcagaaaaaggctgactaaggttcacttcgcttaagcgac 280  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  367 ttcagaaagaggctgactaaggttcacttcgcttaagcgac 407  T

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Target: scaffold0456; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 7512 - 7552
Alignment:
Q  240 ttcagaaaaaggctgactaaggttcacttcgcttaagcgac 280  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  7512 ttcagaaagaggctgactaaggttcacttcgcttaagcgac 7552  T

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Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 28050 - 28118
Alignment:
Q  3 gtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcctcttaatgcaacat 73  Q
    ||||||||||||||||||||| |  | | |||||||||| ||||||||||||||||  |||||||||||||    
T  28050 gtgtatatctacatacaactccaacaatgcatatgtattcatatgactcaccactc--cttaatgcaacat 28118  T

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Target: scaffold0085 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 4559 - 4509
Alignment:
Q  32 catatgtatttatatgactcaccactcctcttaatgcaacatgttcattcac 83  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  4559 catatgtacttatatgactcaccac-ccttttaatgcaacatgttcattcac 4509  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 80179 - 80128
Alignment:
Q  235 caaggttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||||||||||||   ||| ||||||||||||||||||||    
T  80179 caaggttcagaaaaaggctgactaacactcagttcgcttaagcgacggctag 80128  T

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Target: scaffold0342 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 16882 - 16824
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||    
T  16882 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactcc 16824  T

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Target: scaffold0249 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 14787 - 14730
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    |||||||||||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  14787 tgtgtatatctacatacaactcaacaatg-catatgtacttatatgactcaccactcct 14730  T

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Target: scaffold0203 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 17094 - 17036
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||    
T  17094 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactcc 17036  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 326959 - 327017
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||||||||||||||||||||    
T  326959 tgtgtatatctacatacaactccaacaaatgcatatgtatttatatgactcaccactcc 327017  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 321250 - 321308
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| | | | | ||||||||||| ||||||||||||||||    
T  321250 tgtgtatatctacatacaactccaacaaatgcatatgtatttttatgactcaccactcc 321308  T

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Target: scaffold0664 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 2318 - 2375
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||||    
T  2318 tgtgtatatctacatacaactcaacaaatgcatatatatgtatatgactcaccactcc 2375  T

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Target: scaffold0301 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 13405 - 13348
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| |  | | ||||||||||||| ||||||||||||||    
T  13405 tgtgtatatctacatacaactccaacaatgcatatgtatttatgtgactcaccactcc 13348  T

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Target: scaffold0120 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 5051 - 4994
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||||    
T  5051 tgtgtatatctacatacaactcaacaaatgcatatatatgtatatgactcaccactcc 4994  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 12575 - 12534
Alignment:
Q  239 gttcagaaaaaggctgactaaggttcacttcgcttaagcgac 280  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  12575 gttcagaaagaggctgactaaggctcacttcgcttaagcgac 12534  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 71275 - 71332
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||||    
T  71275 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgactcaccactcc 71332  T

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Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 15121 - 15085
Alignment:
Q  250 ggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    ||||||||||||| |||||||||||||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctag 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 496 - 536
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  496 aaaaggctgactaagactcacttcgcttaagcgacggctag 536  T

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Target: scaffold1773; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 156 - 191
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatat 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  156 ctgtgtatatctacatacaactcaactattacatat 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 7435 - 7491
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactc 58  Q
    |||||||||||||||||||||| || | | ||||| ||| |||||||||||||||||    
T  7435 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgactcaccactc 7491  T

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Target: scaffold0117 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 9315 - 9275
Alignment:
Q  246 aaaaggctgactaaggttcacttcgcttaagcgacggctag 286  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  9315 aaaaggctgactaagactcacttcgcttaagcgacggctag 9275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 44379 - 44434
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccact 57  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||||||||||    
T  44379 tgtgtatatctacatacaactcaacaaatgcatatatatgtatatgactcaccact 44434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 110942 - 110977
Alignment:
Q  1 ctgtgtatatctacatacaactctactattacatat 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  110942 ctgtgtatatctacatacaactcaactattacatat 110977  T

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Target: scaffold0574 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 5893 - 5835
Alignment:
Q  2 tgtgtatatctacatacaactcta-ctattacatatgtatttatatgactcaccactcc 59  Q
    ||||||||||| |||||||||| | | | | ||||||||||||||||||||||||||||    
T  5893 tgtgtatatcttcatacaactccaacaaatgcatatgtatttatatgactcaccactcc 5835  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 29932 - 29990
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcct 60  Q
    |||||||||||||||||||||| || | | ||||| ||| |||||||||||| ||||||    
T  29932 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgactcacaactcct 29990  T

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Target: scaffold0154; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 279
Target Start/End: Original strand, 30138 - 30311
Alignment:
Q  107 ccaaaaattcatagaaatcaaccaaaccattcatcattatgtttaaagtgggattagatacctaaacaagagttatacaagct-aaggaaacacacaaga 205  Q
    |||| |||||||  || ||||||||| || | |||||| ||||| | || |||||| ||||||| ||||| |||||||||| | || ||||||    |||    
T  30138 ccaacaattcattaaattcaaccaaatcaattatcattgtgtttta-gtaggattaaatacctatacaagggttatacaagttgaaagaaacattttaga 30236  T
Q  206 gtactaaaaggggtcccctagctcacgaa-caaggttcagaaaaaggctgactaaggttcacttcgcttaagcga 279  Q
     | || ||| |||||||||||  |||||| |||  ||||||||  |||||||||||| |||||||||||||||||    
T  30237 atgctcaaaagggtcccctagtgcacgaagcaaaattcagaaagtggctgactaaggctcacttcgcttaagcga 30311  T

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Target: scaffold0226 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 5334 - 5391
Alignment:
Q  2 tgtgtatatctacatacaactctactattacatatgtatttatatgactcaccactcc 59  Q
    |||||||||||||||||||||| || | | ||||| ||| ||||||||| ||||||||    
T  5334 tgtgtatatctacatacaactcaaccaatgcatatatatgtatatgacttaccactcc 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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