View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7533_low_5 (Length: 271)
Name: NF7533_low_5
Description: NF7533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7533_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 27340063 - 27340287
Alignment:
| Q |
18 |
ataaacaactagtatatagcctatatatttatttccaagataaaatttcatctttagatacttgttagctttt-cccttctttattttatacgtgttgtt |
116 |
Q |
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| T |
27340063 |
ataaacaactagtatatagcctatatatttatttccaagataaaattttatctttagatacttgttagctttttcccttctttattttatacgtgttgtt |
27340162 |
T |
|
| Q |
117 |
tatcaagttagacaattgaacagtatgtggataaataattgaagagaaaagaaaatatcattaatgcacgttgagaaagatttttgataaatgaagaaac |
216 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27340163 |
tatcaagttagacaatttaacagtatgtggataaataattgaagagaaaagaaaatatcattaatgcacgttgagaaagatttttgataaatgaagaaac |
27340262 |
T |
|
| Q |
217 |
aaaagaatgagaatatacaaaaaca |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
27340263 |
aaaagaatgagaatatacaaaaaca |
27340287 |
T |
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