View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7537_low_4 (Length: 237)
Name: NF7537_low_4
Description: NF7537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7537_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 46445259 - 46445036
Alignment:
| Q |
1 |
atggtgatgaaacagtgatgcacaaaactaaaaagtagaggtaataagaaaatcatcaacttgctaattttacatttctatcttacggatactcttattc |
100 |
Q |
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| T |
46445259 |
atggtgatgaaacagtgatgcacaaaactaaaaagtagaggtaataagaaaatcatcaacttgctaattttacatttctatcttacggatactcttattc |
46445160 |
T |
|
| Q |
101 |
aacatattacatatacagaaaaacggcagatgaaatacaatatatctttgaatatgttccattctatatacatgcttgaaatgtgtccatgatttcttgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46445159 |
aacatattacatatacagaaaaacggcagatgaaatacagtatatctttgaatatgttccattctatatacatgcttgaaatgtgtccatgatttcttgc |
46445060 |
T |
|
| Q |
201 |
aagtggctgatattattgatattg |
224 |
Q |
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||||||| |||||||||||||||| |
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| T |
46445059 |
aagtggcagatattattgatattg |
46445036 |
T |
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