View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7547_low_14 (Length: 347)
Name: NF7547_low_14
Description: NF7547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7547_low_14 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 4679018 - 4679336
Alignment:
| Q |
10 |
aagaatatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgag |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679018 |
aagagtatcaacccagatgaggctgttgcttatggtgcagctatccaagctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgag |
4679117 |
T |
 |
| Q |
110 |
atgttaccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaata |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679118 |
atgttaccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaata |
4679217 |
T |
 |
| Q |
210 |
tgctacccgtgaagataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttg |
309 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679218 |
tgctacccgtgaagataattctgatacctttattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttg |
4679317 |
T |
 |
| Q |
310 |
tgtccagatgctcctcgtg |
328 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4679318 |
tgtccagatgctcctcgtg |
4679336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 15594735 - 15594662
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgt |
89 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||| ||||| |
|
|
| T |
15594735 |
atcaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaaggttttaaaaatgt |
15594662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 34467255 - 34467367
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||||||||| ||||||| |||||| | || |||||| | ||||| |||| ||||| ||||| || || || |||||||||||||||| |
|
|
| T |
34467255 |
atcaaccctgatgaggctgtcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtgctgcgagatgtta |
34467354 |
T |
 |
| Q |
116 |
ccccattgtcact |
128 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
34467355 |
caccattgtcact |
34467367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 15594509 - 15594455
Alignment:
| Q |
240 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggt |
294 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| | ||||| ||| |||||||| |
|
|
| T |
15594509 |
aattcaggtttatgagggtgagagagcaagagctagtgacaataatttgcttggt |
15594455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 29465322 - 29465262
Alignment:
| Q |
241 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttg |
301 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| | ||||| ||||||||||||| |||| |
|
|
| T |
29465322 |
attagggtatatgagggtgagagagcaagagctagtgacaattatctgcttggttcatttg |
29465262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 32)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 10494840 - 10494959
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtt |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
10494840 |
tatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgtt |
10494939 |
T |
 |
| Q |
115 |
accccattgtcacttggtat |
134 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10494940 |
accccattgtcacttggtat |
10494959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 296
Target Start/End: Original strand, 13333834 - 13334118
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtt |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||| ||||||||| || ||||| ||||||||| |
|
|
| T |
13333834 |
tatcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagactgtcccgaacttggtgctacgagatgtt |
13333933 |
T |
 |
| Q |
115 |
accccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagac---agaagaatatg |
211 |
Q |
| |
|
| |||||| ||||||||||| || ||||| ||| ||||| ||| ||||||||||| || ||||| | ||| |||||||||| || || |||| |
|
|
| T |
13333934 |
atcccattatcacttggtatttcagtatatgaacatatcatgaatgttgtgattcctaggaacacttccatccctgtcaagaagactaaaggaggatatt |
13334033 |
T |
 |
| Q |
212 |
ctacccgtgaagataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
||| ||||||||||| | || || ||| | || ||||||||||||||||||||||| | ||||| ||||| |||||||| |
|
|
| T |
13334034 |
atacagctgaagataattgttgtgtctctattgatgtatatgagggtgagagagcaagagctagtgacaataatctacttggttc |
13334118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 8667121 - 8666932
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtt |
114 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||| | |||||||||||| || || ||||| |||||||| |
|
|
| T |
8667121 |
tatcaacccagacgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctgtaagaatgtccccaacttggtgctacgagatgtg |
8667022 |
T |
 |
| Q |
115 |
accccattgtcacttggtatccttgt---tgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagaca |
201 |
Q |
| |
|
||||| |||||||||||||| ||| | |||| ||| |||||||||||||||||||||||| ||||| | ||| ||||||||||| |
|
|
| T |
8667021 |
acccctttgtcacttggtatttctgtaagtattgaacatatcatgagtgtggtgattcctagaaacacttccatacctgtcaagaagaca |
8666932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 8659070 - 8658945
Alignment:
| Q |
10 |
aagaatatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgag |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| | || |||||| |||| ||| |||| |||||||||||||| || || ||||||| || |
|
|
| T |
8659070 |
aagagtatcaacccagatgaggctgttgcttatggtgcagctcttcaagctgctgttttaagcaaaggctttaagaatgtcccaaacttggtgctgcaag |
8658971 |
T |
 |
| Q |
110 |
atgttaccccattgtcacttggtatc |
135 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
8658970 |
atgttaccccattgtcacttggtatc |
8658945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 208
Target Start/End: Complemental strand, 1301167 - 1300970
Alignment:
| Q |
10 |
aagaatatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgag |
109 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||||||||| || ||||||||||| ||| |||| || ||||||||||| || || ||||||| || |
|
|
| T |
1301167 |
aagagtatcaaccc-gacgaggctgttgcttatggtgcagctattcaagctgctattttaagcaaaggattcaagaatgtcccaaacttggtgctgcaag |
1301069 |
T |
 |
| Q |
110 |
atgttaccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaat |
208 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||| || |||||||||||||||||| || || ||| | |||||| ||| ||||||| |||||| |
|
|
| T |
1301068 |
atgttaccccattgtcacttggtatcgcagtaggtgatcatgtcatgagtgtggtgattccaaggaacactaccgtgcctgtcaggaagacaaaagaat |
1300970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 8545331 - 8545122
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccc |
118 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||| | |||| |||| |||||||||||| || | ||||| ||||||||||||| |
|
|
| T |
8545331 |
aaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgctgagtgaagacaataagaatgtcccaaacatggtgctacgagatgttaccc |
8545232 |
T |
 |
| Q |
119 |
cattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagacagaagaatatgctacccg |
218 |
Q |
| |
|
| ||||||||||||||| || | | | | ||| |||||||||||||||||| | ||||||||||| || ||||||||||| ||| ||| ||||| | |
|
|
| T |
8545231 |
ctttgtcacttggtatctttatacacggaaatattatgagtgtggtgattccttggaatacttctgtaccattcaagaagacacaagtttattctaccgg |
8545132 |
T |
 |
| Q |
219 |
tgaagataat |
228 |
Q |
| |
|
|||||||||| |
|
|
| T |
8545131 |
tgaagataat |
8545122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 8654155 - 8654032
Alignment:
| Q |
12 |
gaatatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagat |
111 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||| || ||| | ||||||||||||||||| |||| |||||||||||||| || || ||||| || ||| |
|
|
| T |
8654155 |
gaatatcaacccagatgaggctattgcatatggcgctgctgttcaggctgctattttgagtgaagactttaagaatgtccccaacttggtgctacgtgat |
8654056 |
T |
 |
| Q |
112 |
gttaccccattgtcacttggtatc |
135 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
8654055 |
gttaccccattgtcacttggtatc |
8654032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 6789213 - 6789096
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||| ||||||||||| | ||||||||||| | ||||| ||| || || || ||||||| |||||||| |
|
|
| T |
6789213 |
atcaaccctgatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtgctgcaagatgtta |
6789114 |
T |
 |
| Q |
116 |
ccccattgtcacttggta |
133 |
Q |
| |
|
| || ||||| ||||||| |
|
|
| T |
6789113 |
caccgttgtctcttggta |
6789096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 8537737 - 8537638
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||| ||||||||||| | ||||||| ||| |||||| ||| ||||| || |||||||||||||||| |
|
|
| T |
8537737 |
atcaaccctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcggaggcattaagactgttccgaacttggtgctgcgagatgtta |
8537638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 8671608 - 8671683
Alignment:
| Q |
59 |
ctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggtat |
134 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| || || ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
8671608 |
ctgctattttgagcaaaggctttaagaatgtccccaacttggtgctacgagatgttacgccattgtcacttggtat |
8671683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 328
Target Start/End: Complemental strand, 8646344 - 8646263
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttttgtgtccagatgctcctcgtg |
328 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| | |||| ||||||||||| |
|
|
| T |
8646344 |
gtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttaatctttggctcccagctgctcctcgtg |
8646263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 8616316 - 8616201
Alignment:
| Q |
79 |
tttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaata |
178 |
Q |
| |
|
||||||||||| || || || | |||||||||||||||||| |||||||||||||| | || | | ||||| |||||||||||||||||||| |||| |
|
|
| T |
8616316 |
tttaagaatgttccaaacttggcgctgcgagatgttacccctctgtcacttggtatcttagtcaaaggagatattatgagtgtggtgattcctaggaata |
8616217 |
T |
 |
| Q |
179 |
cttctgtgcctatcaa |
194 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
8616216 |
cttctgtacctgtcaa |
8616201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 8586400 - 8586453
Alignment:
| Q |
240 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttgg |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
8586400 |
aattaaggtttatgagggtgagagagcaagagctagtgacaacaatctgcttgg |
8586453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 1300925 - 1300873
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtt |
299 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1300925 |
gtttatgagggtgagagagcaagagcgcaagacaacaatctgcttggttcgtt |
1300873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 8581401 - 8581285
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||| ||||||||| | | || ||||| |||||| ||| || || || | |||||||||||| |
|
|
| T |
8581401 |
atcaaccctgatgaggctgttgcttatggtgctgctattcaggctgctttggttagtgaaggcattaagagtgttccaaacttgattttgcgagatgtta |
8581302 |
T |
 |
| Q |
116 |
ccccattgtcacttggt |
132 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
8581301 |
caccattgtcacttggt |
8581285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 7878200 - 7878315
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||| | ||||||||| | | | || ||| |||||||||| || ||||| ||| ||| |||||||| |
|
|
| T |
7878200 |
atcaacccggatgaagctgttgcttatggtgcagctgttcaggctgctctgctttgtgatggtattaagaatgttcctaatttggtgttgcaagatgtta |
7878299 |
T |
 |
| Q |
116 |
ccccattgtcacttgg |
131 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
7878300 |
ctccattgtctcttgg |
7878315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 3146731 - 3146682
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
3146731 |
gtttatgagggtgagagagcaagagctagtgacaacaatctgcttggttc |
3146682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 8590339 - 8590222
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| | || |||||| | | | || || |||||||||| || ||||| ||||| | |||||||| |
|
|
| T |
8590339 |
atcaatccagatgaggctgttgcttatggtgcagctgttcaagctgctttgctttgtgatgggattaagaatgttcctaatttggtgctacaagatgtta |
8590240 |
T |
 |
| Q |
116 |
ccccattgtcacttggta |
133 |
Q |
| |
|
| |||||||| ||||||| |
|
|
| T |
8590239 |
ctccattgtctcttggta |
8590222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 8658830 - 8658778
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtt |
299 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8658830 |
gtttacgagggtgagagagcaagagcgctagacaacaatctgcttggttcgtt |
8658778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 3146965 - 3146846
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||| | || |||||| | ||||| |||| ||||| ||||| || || || ||| ||| ||||||| |
|
|
| T |
3146965 |
atcaaccctgatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggtggtgcaagatgttg |
3146866 |
T |
 |
| Q |
116 |
ccccattgtcacttggtatc |
135 |
Q |
| |
|
| || ||||| ||||||||| |
|
|
| T |
3146865 |
ctcctttgtctcttggtatc |
3146846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 29578142 - 29578257
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccc |
118 |
Q |
| |
|
||||| || |||||||||||||||||||||||| | ||||||||| | |||| || || |||||||||| || ||||| || |||||||| |||| | |
|
|
| T |
29578142 |
aaccctgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggtcttgcgagatattacac |
29578241 |
T |
 |
| Q |
119 |
cattgtcacttggtat |
134 |
Q |
| |
|
| ||||| |||||||| |
|
|
| T |
29578242 |
ccttgtcgcttggtat |
29578257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 29582308 - 29582355
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgct |
63 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
29582308 |
atcaaccctgatgaggctgttgcttatggtgcagctgtgcaggctgct |
29582355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 8609618 - 8609500
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||| ||||||||||| | ||| | ||||| | || || || || || |||||||||||||||| |
|
|
| T |
8609618 |
atcaaccctgatgaggcggttgcttatggtgctgctgtccaggctgctttgttgggtgaaggcatcaaatcagttccaaacttggtgctgcgagatgtta |
8609519 |
T |
 |
| Q |
116 |
ccccattgtcacttggtat |
134 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
8609518 |
cacctttgtcacttggtat |
8609500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 8576027 - 8575918
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| | | |||| |||||| | ||||| ||||| ||||||||| || || || ||| | |||||||||| |
|
|
| T |
8576027 |
atcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgctttgttgagtgaaggcagtaagaatgttccaaacttggtgttacgagatgtta |
8575928 |
T |
 |
| Q |
116 |
ccccattgtc |
125 |
Q |
| |
|
| || ||||| |
|
|
| T |
8575927 |
caccgttgtc |
8575918 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 8616188 - 8616136
Alignment:
| Q |
241 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttgg |
293 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| | ||||||||||||||||| |
|
|
| T |
8616188 |
attaagttttatgagggtgagagatcaagagctagtgacaacaatctgcttgg |
8616136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 17267641 - 17267593
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgct |
63 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
17267641 |
tatcaaccctgatgaggctgttgcttatggtgctgctgttcaggctgct |
17267593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 17259942 - 17259895
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgct |
63 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
17259942 |
atcaaccctgatgaggctgttgcttatggtgctgctgttcaggctgct |
17259895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 8570009 - 8569967
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctg |
61 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8570009 |
aaccctgatgaggctgttgcttacggtgcagctattcaggctg |
8569967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 8666883 - 8666829
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttg |
301 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||| |||||||||||||| |||| |
|
|
| T |
8666883 |
gtttatgagggtgagagaccaagagctgctgacaataatctgcttggttcatttg |
8666829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 8017874 - 8017911
Alignment:
| Q |
10 |
aagaatatcaacccagatgaggctgttgcttatggtgc |
47 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
8017874 |
aagagtatcaacccagacgaggctgttgcttatggtgc |
8017911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 8653936 - 8653863
Alignment:
| Q |
222 |
agataattctggtaccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggtt |
295 |
Q |
| |
|
|||||||| |||| ||| |||| |||||||||||||||||| ||||||| | ||||| ||||||||||||| |
|
|
| T |
8653936 |
agataattgtggtgcctctattattgtttatgagggtgagagaccaagagctagtgacaataatctgcttggtt |
8653863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 8586236 - 8586292
Alignment:
| Q |
79 |
tttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggtatc |
135 |
Q |
| |
|
|||||||| || || || || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
8586236 |
tttaagaaagttccaaacttggtgctgcgagatgttacccctctgtcacttggtatc |
8586292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 43625110 - 43624928
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccc |
118 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||| || || || ||||||||||||||||||| |
|
|
| T |
43625110 |
aaccctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaagaatgttccaaaattggtgctgcgagatgttaccc |
43625011 |
T |
 |
| Q |
119 |
cattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagaca |
201 |
Q |
| |
|
| ||||||||||||||| | | | || | ||||||||||||||||||||| ||||||||||| ||| ||||||||||| |
|
|
| T |
43625010 |
ctttgtcacttggtatcttaaacaagggaggtgtcatgagtgtggtgattcctaggaatacttctgtacctgtcaagaagaca |
43624928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 16657983 - 16658103
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtt |
114 |
Q |
| |
|
||||||||| ||||| ||||||||||| ||||||||| | || |||||||||||||| ||||| |||||||||||||| |||| ||| || |||||||| |
|
|
| T |
16657983 |
tatcaacccggatgaagctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgtt |
16658082 |
T |
 |
| Q |
115 |
accccattgtcacttggtatc |
135 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
16658083 |
accccattgtcgcttggtatc |
16658103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 16662459 - 16662578
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||| | || |||||| | ||||| ||||| ||||| |||| || || || ||||||||||| |||| |
|
|
| T |
16662459 |
atcaaccctgatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtgctgcgagacgtta |
16662558 |
T |
 |
| Q |
116 |
ccccattgtcacttggtatc |
135 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
16662559 |
ccccattgtcacttggtatc |
16662578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 11999106 - 11998992
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccc |
118 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||| | || |||||| | ||||| |||| | |||||||||| || ||||| ||| ||| |||||||| | |
|
|
| T |
11999106 |
aaccctgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtgaagatgttaagaatgttccaaatttggtgttgcaggatgttactc |
11999007 |
T |
 |
| Q |
119 |
cattgtcacttggta |
133 |
Q |
| |
|
| ||||| ||||||| |
|
|
| T |
11999006 |
ctttgtctcttggta |
11998992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 43624887 - 43624819
Alignment:
| Q |
239 |
taattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttt |
307 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||| || |||||||||||| ||||||| ||| |||||| |
|
|
| T |
43624887 |
taattgaggtttatgagtgtgagagagcatgagtaagtgacaacaatctgattggttcttttaatcttt |
43624819 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 16658214 - 16658269
Alignment:
| Q |
240 |
aattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggtt |
295 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | ||||| |||||||| |||| |
|
|
| T |
16658214 |
aattaatgtttatgagggtgagagagcaagagctgctgacaataatctgctcggtt |
16658269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 7541699 - 7541645
Alignment:
| Q |
241 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggtt |
295 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | || |||||| ||||||||| |
|
|
| T |
7541699 |
attaatgtttatgagggtgagagagcaagagccagtgataacaatttgcttggtt |
7541645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 12246096 - 12246156
Alignment:
| Q |
236 |
ccttaattaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
|||| ||||||||||| |||||||||||| ||| ||| | ||||||||| |||||||||| |
|
|
| T |
12246096 |
ccttgattaaggtttacgagggtgagagaacaaaagccagtgacaacaatttgcttggttc |
12246156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 9336357 - 9336546
Alignment:
| Q |
15 |
tatcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtt |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | || |||||||||||||| ||||| |||||||||| || || || ||||| ||||||||| |
|
|
| T |
9336357 |
tatcaacccagatgaggctgttgcttatggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgcgcccaacttggtgctacgagatgtt |
9336456 |
T |
 |
| Q |
115 |
accccattgtcacttggtatc----cttgttgatgaagataccatgagtgtggtgattcctagaaatacttctgtgcctatcaagaagaca |
201 |
Q |
| |
|
||||||||||||||||||||| | | | | ||| ||| |||||||||||||||||||||||| ||||| | ||| ||||||||||| |
|
|
| T |
9336457 |
accccattgtcacttggtatcgcaacat-ataaggaaaatatcatgagtgtggtgattcctagaaacacttccatacctgtcaagaagaca |
9336546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 30774953 - 30774786
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgtta |
115 |
Q |
| |
|
||||| || |||||||| |||||| | || |||||| ||||||||||| | ||||| ||||| ||||||||| ||| || || |||||||||||||| | |
|
|
| T |
30774953 |
atcaatcctgatgaggcagttgctcacggggcagctgtccaggctgctctattgagtgaaggcattaagaatgccccaaagttggtgctgcgagatgtca |
30774854 |
T |
 |
| Q |
116 |
ccccattgtcacttggtatccttgttgatgaagataccatgagtgtggtgattcctagaaatacttct |
183 |
Q |
| |
|
|||| |||||||||||||| || || |||| |||||| |||||| |||||||| ||||||||| |
|
|
| T |
30774853 |
cccctttgtcacttggtatttcagtgaatcaagacaccatggatgtggtaattcctaggaatacttct |
30774786 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 9336595 - 9336644
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
|||||||||||||||||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
9336595 |
gtttatgagggtgagagaccaagagctactgacaataatctgcttggttc |
9336644 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 23597052 - 23597109
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcg |
73 |
Q |
| |
|
|||||||| |||||||||||||||||||| || || |||| |||||||||||||||| |
|
|
| T |
23597052 |
atcaaccctgatgaggctgttgcttatggcgctgcagtccaagctgctattttgagcg |
23597109 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 30774725 - 30774670
Alignment:
| Q |
241 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
||||| ||||||||||||||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
30774725 |
attaatgtttatgagggtgagagagcaagagtcgcggacaacaatctgctaggttc |
30774670 |
T |
 |
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Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 28219616 - 28219499
Alignment:
| Q |
19 |
aacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccc |
118 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| | ||||||||| | ||||| ||||| ||||| || || ||||| || ||||||| ||||||||| | |
|
|
| T |
28219616 |
aaccctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccgaagttggtgctgcaagatgttacac |
28219517 |
T |
 |
| Q |
119 |
cattgtcacttggtatcc |
136 |
Q |
| |
|
| ||||| |||||||||| |
|
|
| T |
28219516 |
ctttgtctcttggtatcc |
28219499 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 247 - 306
Target Start/End: Complemental strand, 28219385 - 28219326
Alignment:
| Q |
247 |
gtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatctt |
306 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
28219385 |
gtttatgagggtgagagagcaaaagcaagtgacaacaatctgcttggttcttttgatctt |
28219326 |
T |
 |
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Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 43744289 - 43744223
Alignment:
| Q |
241 |
attaaggtttatgagggtgagagagcaagagcaacagacaacaatctgcttggttcgtttgatcttt |
307 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||| |
|
|
| T |
43744289 |
attaaagtttatgagggtgagagagcaagagcaagtgacaacaatctgcttggttcttttgctcttt |
43744223 |
T |
 |
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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 12528205 - 12528144
Alignment:
| Q |
16 |
atcaacccagatgaggctgttgcttatggtgcagctatccaggctgctattttgagcgaagg |
77 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| | ||||||||| | ||||| ||||| |
|
|
| T |
12528205 |
atcaaccctgatgaggctgttgcttatggtgccgctgttcaggctgctttgttgagtgaagg |
12528144 |
T |
 |
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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 53416761 - 53416809
Alignment:
| Q |
248 |
tttatgagggtgagagagcaagagcaacagacaacaatctgcttggttc |
296 |
Q |
| |
|
||||||||||||||||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
53416761 |
tttatgagggtgagagaccaagagctactgacaataatctgcttggttc |
53416809 |
T |
 |
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