View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7550_high_1 (Length: 867)

Name: NF7550_high_1
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7550_high_1
NF7550_high_1
[»] chr5 (32 HSPs)
chr5 (1-343)||(9603858-9604200)
chr5 (547-848)||(9604840-9605141)
chr5 (1-139)||(31009033-31009171)
chr5 (391-514)||(9604249-9604371)
chr5 (1-137)||(33825243-33825379)
chr5 (1-136)||(35943812-35943947)
chr5 (1-134)||(18520806-18520939)
chr5 (1-134)||(33149560-33149693)
chr5 (1-134)||(35785244-35785377)
chr5 (1-140)||(26720561-26720700)
chr5 (1-140)||(26990310-26990449)
chr5 (31-140)||(2177439-2177548)
chr5 (1-134)||(2740319-2740452)
chr5 (1-137)||(6679743-6679879)
chr5 (6-116)||(39557457-39557567)
chr5 (1-134)||(14831859-14831992)
chr5 (1-129)||(13811697-13811825)
chr5 (6-134)||(40145457-40145585)
chr5 (1-138)||(15409528-15409665)
chr5 (1-126)||(36732872-36732997)
chr5 (1-141)||(3921180-3921320)
chr5 (1-139)||(2252085-2252223)
chr5 (1-138)||(16327946-16328083)
chr5 (31-135)||(36875537-36875637)
chr5 (9-138)||(21370057-21370186)
chr5 (1-81)||(42414277-42414357)
chr5 (48-139)||(39688814-39688905)
chr5 (47-140)||(6259917-6260010)
chr5 (42-139)||(20073433-20073530)
chr5 (516-555)||(9604391-9604430)
chr5 (1-95)||(28177820-28177914)
chr5 (10-63)||(25831339-25831392)
[»] chr8 (42 HSPs)
chr8 (10-140)||(42354504-42354634)
chr8 (1-137)||(5957875-5958011)
chr8 (1-138)||(8841350-8841487)
chr8 (1-138)||(10284549-10284686)
chr8 (1-134)||(12831092-12831225)
chr8 (1-138)||(37038524-37038661)
chr8 (1-139)||(43414498-43414636)
chr8 (1-134)||(504043-504176)
chr8 (1-134)||(34012218-34012351)
chr8 (221-325)||(6457525-6457629)
chr8 (1-139)||(42221560-42221698)
chr8 (1-134)||(14547967-14548100)
chr8 (1-134)||(23122519-23122652)
chr8 (6-135)||(40423864-40423993)
chr8 (1-134)||(44507010-44507142)
chr8 (216-310)||(6451351-6451445)
chr8 (1-126)||(1179870-1179995)
chr8 (1-134)||(9122230-9122363)
chr8 (1-135)||(16056322-16056456)
chr8 (6-136)||(17443875-17444005)
chr8 (1-134)||(15197378-15197511)
chr8 (47-138)||(32707921-32708012)
chr8 (6-139)||(15048098-15048232)
chr8 (1-134)||(24307715-24307848)
chr8 (42-138)||(4854781-4854877)
chr8 (6-138)||(32032774-32032906)
chr8 (8-142)||(30183790-30183923)
chr8 (775-848)||(6451007-6451080)
chr8 (1-134)||(34307261-34307394)
chr8 (49-134)||(42710216-42710301)
chr8 (227-279)||(6263800-6263852)
chr8 (42-138)||(40467786-40467882)
chr8 (48-134)||(30479396-30479482)
chr8 (225-279)||(6275044-6275098)
chr8 (227-273)||(6289537-6289583)
chr8 (227-273)||(6321919-6321965)
chr8 (227-273)||(6332493-6332539)
chr8 (227-273)||(6363685-6363731)
chr8 (101-139)||(20074869-20074907)
chr8 (228-273)||(6391494-6391539)
chr8 (227-276)||(6424573-6424622)
chr8 (775-848)||(6457192-6457265)
[»] chr6 (19 HSPs)
chr6 (1-140)||(31952946-31953085)
chr6 (1-134)||(11427663-11427796)
chr6 (1-138)||(31976293-31976430)
chr6 (1-136)||(28536408-28536541)
chr6 (1-134)||(17598599-17598732)
chr6 (1-134)||(29857872-29858005)
chr6 (1-134)||(32869723-32869856)
chr6 (1-138)||(4231593-4231730)
chr6 (1-134)||(22880580-22880713)
chr6 (1-108)||(23128075-23128182)
chr6 (1-139)||(30341277-30341415)
chr6 (1-138)||(15989960-15990097)
chr6 (1-140)||(15507940-15508079)
chr6 (92-138)||(22421997-22422043)
chr6 (1-140)||(12732527-12732665)
chr6 (7-138)||(31110679-31110810)
chr6 (1-134)||(15832622-15832755)
chr6 (42-136)||(30870100-30870193)
chr6 (8-81)||(9379687-9379760)
[»] chr3 (41 HSPs)
chr3 (1-140)||(35536671-35536810)
chr3 (1-140)||(20764831-20764970)
chr3 (1-139)||(8076438-8076576)
chr3 (1-138)||(14623757-14623894)
chr3 (6-140)||(30801649-30801783)
chr3 (1-136)||(13897975-13898110)
chr3 (1-143)||(8956807-8956949)
chr3 (1-134)||(33644245-33644378)
chr3 (1-134)||(17470450-17470583)
chr3 (9-138)||(35093638-35093767)
chr3 (1-134)||(49607459-49607592)
chr3 (1-134)||(53982056-53982189)
chr3 (1-139)||(33118767-33118906)
chr3 (1-140)||(26141446-26141587)
chr3 (1-134)||(31456734-31456867)
chr3 (1-134)||(52629345-52629478)
chr3 (1-134)||(54868817-54868950)
chr3 (6-138)||(11347840-11347972)
chr3 (1-140)||(24699871-24700009)
chr3 (10-138)||(25407065-25407193)
chr3 (1-141)||(51419275-51419415)
chr3 (42-136)||(43746425-43746519)
chr3 (42-138)||(35965700-35965796)
chr3 (1-140)||(45058469-45058608)
chr3 (6-140)||(26754745-26754879)
chr3 (227-293)||(36744661-36744727)
chr3 (37-138)||(21746106-21746207)
chr3 (1-138)||(36331247-36331384)
chr3 (50-142)||(42823205-42823297)
chr3 (1-140)||(41189680-41189819)
chr3 (68-134)||(11095289-11095355)
chr3 (6-140)||(47531915-47532049)
chr3 (1-136)||(1758379-1758511)
chr3 (10-134)||(9563053-9563177)
chr3 (9-97)||(41080761-41080848)
chr3 (47-134)||(36707350-36707437)
chr3 (1-134)||(48587023-48587146)
chr3 (8-136)||(48375626-48375754)
chr3 (10-133)||(39670065-39670188)
chr3 (100-138)||(11140961-11140999)
chr3 (1-59)||(27714888-27714946)
[»] chr2 (39 HSPs)
chr2 (3-138)||(20700862-20700997)
chr2 (1-134)||(7465657-7465790)
chr2 (1-134)||(10249304-10249437)
chr2 (1-134)||(17473065-17473198)
chr2 (1-134)||(28863500-28863633)
chr2 (6-134)||(19930742-19930870)
chr2 (1-127)||(33436029-33436155)
chr2 (1-134)||(13438388-13438521)
chr2 (1-134)||(32505570-32505703)
chr2 (1-134)||(40701523-40701656)
chr2 (10-137)||(44151978-44152108)
chr2 (1-116)||(9058525-9058640)
chr2 (32-139)||(17823864-17823971)
chr2 (1-139)||(13365398-13365536)
chr2 (1-139)||(40613819-40613957)
chr2 (1-142)||(3440024-3440165)
chr2 (1-138)||(3737988-3738125)
chr2 (10-134)||(30915517-30915641)
chr2 (6-138)||(36168886-36169018)
chr2 (1-140)||(38732399-38732538)
chr2 (6-136)||(21301420-21301550)
chr2 (42-139)||(2533209-2533306)
chr2 (1-137)||(17819923-17820059)
chr2 (1-134)||(28381577-28381710)
chr2 (47-136)||(41758678-41758767)
chr2 (1-138)||(43490166-43490303)
chr2 (6-134)||(4060735-4060863)
chr2 (6-134)||(15428663-15428790)
chr2 (1-140)||(2997403-2997542)
chr2 (68-134)||(38882733-38882799)
chr2 (1-139)||(42257238-42257376)
chr2 (1-138)||(38273061-38273197)
chr2 (6-138)||(3034901-3035033)
chr2 (1-140)||(33436256-33436385)
chr2 (227-279)||(42693655-42693707)
chr2 (68-134)||(5574422-5574488)
chr2 (6-136)||(41575187-41575308)
chr2 (227-294)||(42688093-42688160)
chr2 (73-134)||(27864808-27864869)
[»] chr4 (34 HSPs)
chr4 (6-140)||(29239936-29240070)
chr4 (1-139)||(50052345-50052483)
chr4 (1-134)||(6034089-6034222)
chr4 (1-138)||(41823927-41824064)
chr4 (1-139)||(50526088-50526226)
chr4 (1-134)||(48182971-48183104)
chr4 (6-142)||(28480182-28480318)
chr4 (6-142)||(28481057-28481193)
chr4 (6-142)||(28481932-28482068)
chr4 (6-134)||(41236397-41236525)
chr4 (1-142)||(31910237-31910378)
chr4 (1-134)||(42044289-42044422)
chr4 (6-140)||(19670632-19670766)
chr4 (32-136)||(40574855-40574959)
chr4 (1-108)||(480395-480502)
chr4 (1-139)||(29547876-29548014)
chr4 (1-134)||(23608280-23608413)
chr4 (1-140)||(3481699-3481828)
chr4 (1-136)||(29977930-29978065)
chr4 (6-140)||(47986258-47986391)
chr4 (48-138)||(55475283-55475373)
chr4 (1-134)||(24995029-24995162)
chr4 (1-138)||(50813810-50813947)
chr4 (48-140)||(18924411-18924503)
chr4 (1-137)||(48647645-48647781)
chr4 (1-140)||(17983659-17983798)
chr4 (1-132)||(18768972-18769102)
chr4 (2-97)||(29234204-29234299)
chr4 (1-140)||(29589656-29589795)
chr4 (1-135)||(47104589-47104723)
chr4 (1-134)||(11511385-11511517)
chr4 (1-122)||(54473467-54473588)
chr4 (6-139)||(44536663-44536796)
chr4 (6-135)||(56300086-56300215)
[»] chr7 (38 HSPs)
chr7 (5-138)||(41423731-41423864)
chr7 (1-140)||(35522921-35523060)
chr7 (6-137)||(16374743-16374874)
chr7 (1-134)||(4999436-4999569)
chr7 (1-134)||(19329887-19330020)
chr7 (6-134)||(40957757-40957885)
chr7 (1-134)||(8080305-8080438)
chr7 (1-129)||(19436114-19436242)
chr7 (1-134)||(38837262-38837395)
chr7 (1-138)||(35468773-35468910)
chr7 (8-141)||(39255839-39255971)
chr7 (6-134)||(32951415-32951543)
chr7 (6-141)||(27744224-27744359)
chr7 (1-127)||(35137578-35137704)
chr7 (68-138)||(46033719-46033789)
chr7 (1-138)||(22343406-22343543)
chr7 (8-136)||(18207232-18207359)
chr7 (1-108)||(3694412-3694519)
chr7 (1-116)||(3784040-3784155)
chr7 (1-140)||(8238258-8238397)
chr7 (32-139)||(31735953-31736060)
chr7 (1-136)||(41915786-41915921)
chr7 (73-139)||(46374741-46374807)
chr7 (72-139)||(21234517-21234584)
chr7 (1-134)||(38267085-38267218)
chr7 (6-138)||(38044247-38044379)
chr7 (1-134)||(3434607-3434730)
chr7 (48-134)||(11044270-11044356)
chr7 (8-138)||(12310956-12311086)
chr7 (1-134)||(7389434-7389566)
chr7 (1-134)||(36362071-36362192)
chr7 (1-137)||(2318160-2318298)
chr7 (10-136)||(7727960-7728086)
chr7 (38-135)||(1766702-1766799)
chr7 (10-138)||(26296698-26296826)
chr7 (1-134)||(36361847-36361968)
chr7 (4-136)||(45223090-45223222)
chr7 (1-140)||(32564342-32564481)
[»] chr1 (31 HSPs)
chr1 (1-138)||(32813292-32813429)
chr1 (6-140)||(11152294-11152428)
chr1 (1-134)||(27564657-27564790)
chr1 (1-138)||(51898601-51898738)
chr1 (6-138)||(44454029-44454165)
chr1 (6-127)||(50630508-50630629)
chr1 (6-134)||(41758855-41758983)
chr1 (6-134)||(48716204-48716332)
chr1 (1-134)||(9474798-9474931)
chr1 (1-134)||(37649243-37649376)
chr1 (1-139)||(3302450-3302588)
chr1 (1-143)||(5958913-5959055)
chr1 (1-134)||(47452242-47452375)
chr1 (6-124)||(38632253-38632371)
chr1 (1-138)||(37926356-37926493)
chr1 (68-140)||(45044476-45044548)
chr1 (42-136)||(49811447-49811541)
chr1 (1-134)||(2581960-2582093)
chr1 (1-134)||(3000364-3000497)
chr1 (1-134)||(38595199-38595332)
chr1 (1-138)||(50590918-50591055)
chr1 (6-138)||(41608411-41608543)
chr1 (10-140)||(47748496-47748626)
chr1 (1-134)||(43177-43310)
chr1 (1-134)||(8346309-8346443)
chr1 (1-138)||(6260915-6261052)
chr1 (1-138)||(7740778-7740915)
chr1 (1-105)||(13414806-13414910)
chr1 (68-136)||(34339968-34340035)
chr1 (6-81)||(44548351-44548426)
chr1 (68-134)||(26274541-26274607)
[»] scaffold1268 (1 HSPs)
scaffold1268 (6-137)||(848-979)
[»] scaffold1267 (1 HSPs)
scaffold1267 (6-137)||(848-979)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-134)||(4074-4207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (4-140)||(8779-8915)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-137)||(152543-152679)
[»] scaffold0321 (1 HSPs)
scaffold0321 (10-134)||(10031-10155)
[»] scaffold0316 (1 HSPs)
scaffold0316 (52-140)||(17199-17287)


Alignment Details
Target: chr5 (Bit Score: 287; Significance: 1e-160; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 9603858 - 9604200
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||| |||| ||     
T  9603858 cacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcatttcgtcttctctcttcttagtgcttgggatgtacaaa 9603957  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttccttatatcaagtaagataaaagaaacatgtgcagttattgaaacaatccaatttaatatatat 200  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9603958 ggtgtatgagaataaatggtgtctacgtaacattttacttatattaagtaagataaaagaaacatgtgcatttattgaaacaatccaatttaatatatat 9604057  T
Q  201 atttcttattttttatagtcagcaaatctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattcgccttct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9604058 atttcttattttttatagtcagcaaatctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattcgccttct 9604157  T
Q  301 acaagtaagtttcaaatctattcttgatcatcaaaagtcataa 343  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9604158 acaagtaagtttcaaatctattcttgatcatcaaaagtcataa 9604200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-154
Query Start/End: Original strand, 547 - 848
Target Start/End: Original strand, 9604840 - 9605141
Alignment:
Q  547 atatttttaagccatattaaattannnnnnngacaggagttcccaccgaaaagcacgttagatattgctgtctatggtgatcaaacaagtatattaaaaa 646  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9604840 atatttttaagccatattaaattatttttttgacaggagttcccaccgaaaagcacgttagatattgctgtctatggtgatcaaacaagtatattaaaaa 9604939  T
Q  647 aggaacatttggagattaatctaggtgggctcacagtagaaaaggtataatgatataaatataaaacatgtttcacataaaagtcattattaattggctt 746  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9604940 aggaacatttggagattaatctaggtgggctcacagtagaaaaggtataatgatataaatataaaacatgtttcacataaaagtcattattaattggctt 9605039  T
Q  747 ataaattatttaaacttatgaaaagtaagtgattgaaattaaacttgtgaaacaggcacttaatggtcaaagattattcatcttagattatcatgatgca 846  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9605040 ataaattatttaaatttatgaaaagtaagtgattgaaattaaacttgtgaaacaggcacttaatggtcaaagattattcatcttagattatcatgatgca 9605139  T
Q  847 tt 848  Q
    ||    
T  9605140 tt 9605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 31009033 - 31009171
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||| |||| | |  |||||||||||||| |||||||||||||| ||     
T  31009033 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctcttctcttctctcttcctagtgcatggggtgtacaaa 31009132  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  31009133 ggtgtatgagaataaagggtgtctatgtaacattttcct 31009171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 391 - 514
Target Start/End: Original strand, 9604249 - 9604371
Alignment:
Q  391 ctactgtatcaatatcaatgagggggtctgttcaatgataagagnnnnnnnnnnnngttacaatttaatgataagagtttgatattgcagtttttgaaag 490  Q
    |||||||||| ||||||||||||||||||||| |||||||||||            ||||||||||||||||||||||||||||||| ||||||||||||    
T  9604249 ctactgtatctatatcaatgagggggtctgtttaatgataagagtttttttcttg-gttacaatttaatgataagagtttgatattgtagtttttgaaag 9604347  T
Q  491 aaatcggttgtaaaatgatgaata 514  Q
    ||||||||||||||||||||||||    
T  9604348 aaatcggttgtaaaatgatgaata 9604371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33825379 - 33825243
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||||||| ||||||| | |  | |||| |||||||||||||| || |  |||||||||||||| |||||||||||||| |||    
T  33825379 cacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttttatcttctcttctctcttcctagtgcatggggtgtagaag 33825280  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    | ||||||||||||||||||||| |||||||||||||    
T  33825279 gctgtatgagaataaatggtgtcaatgtaacattttc 33825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 35943947 - 35943812
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | |||||||||| |||| ||||||||||||||| | || |||| ||||||||| |||||||||||||| |||    
T  35943947 cacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctttcctctcctcttttctcttcctagtgcatggggtgtacaag 35943848  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    ||||||||  ||||||  ||||||||||||||||||    
T  35943847 ggtgtatggaaataaaatgtgtctatgtaacatttt 35943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18520939 - 18520806
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||||||| || || ||||||||||||||  |||||| |||||| |||    
T  18520939 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaag 18520840  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||| |||||| |||||||||||| ||||    
T  18520839 ggtgtatgaaaataaagggtgtctatgtatcatt 18520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 33149693 - 33149560
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||| ||||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  33149693 cacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 33149594  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||| ||||||||| |||||||||||| ||||    
T  33149593 ggtgtacgagaataaagggtgtctatgtatcatt 33149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 35785244 - 35785377
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | |||||||||  |||||||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  35785244 cacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaag 35785343  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  35785344 ggtgtatggaaataaaaggtgtctatgtatcatt 35785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26720561 - 26720700
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||| ||||||||||||||||  ||  ||||||||  |||| ||||||||||||||  | |  ||||||||||||||  || ||||||||||  ||    
T  26720561 cacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatgtatggggtgtactag 26720660  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  26720661 ggtgtatgagaataaatgatgtctatataacattttcctt 26720700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26990310 - 26990449
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||| ||||||||||||||||  ||  ||||||||  |||| ||||||||||||||  | |  ||||||||||||||  || ||||||||||  ||    
T  26990310 cacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcctaatgtatggggtgtactag 26990409  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  26990410 ggtgtatgagaataaatgatgtctatataacattttcctt 26990449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 31 - 140
Target Start/End: Original strand, 2177439 - 2177548
Alignment:
Q  31 gtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaa 130  Q
    |||||||||| |||| |||| |||||||||| | || |||||||||||||| |||||| || |||| |||||||||||||||||||  |||||| |||||    
T  2177439 gtggatcccacacaagcacattttctctttcctctcctcttctctcttcctagtgcattggatgtacaagggtgtatgagaataaaatgtgtctctgtaa 2177538  T
Q  131 cattttcctt 140  Q
    ||||||||||    
T  2177539 cattttcctt 2177548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2740319 - 2740452
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||||  | ||  |||||||||||||  |||||||| |||| |||    
T  2740319 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctccccttctctcttcctaatgcatgggatgtacaag 2740418  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  2740419 ggtgtatgggaataaagggtgtctatgtatcatt 2740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6679743 - 6679879
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||| |||  |||| |||  |||| |||| |||||||||  | || ||||||||||||||  || || ||||||| |||    
T  6679743 cacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctcttttctctcctcttctctcttcctaatgtatagggtgtacaag 6679842  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  6679843 ggtgtatgacaataaatgatgtctatgtaacattttc 6679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 39557567 - 39557457
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||||| || || ||||||||||||||  | |||| |||||| | || | |    
T  39557567 acacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctctcttcctaatacatgaggtgtacatggatct 39557468  T
Q  106 atgagaataaa 116  Q
    |||||||||||    
T  39557467 atgagaataaa 39557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 14831859 - 14831992
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||||||  ||| |||||||||  |||| |||||||||| |||  | || ||||||||||||||  ||||||||||||| |||    
T  14831859 cacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttcttttttttctcctcttctctcttcctaatgcatggggtgtacaag 14831958  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  14831959 gatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13811697 - 13811825
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||||||   | || ||||||||||||||  |||||||| |||| |||    
T  13811697 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctctctcctcttctctcttcctaatgcatgggatgtacaag 13811796  T
Q  101 ggtgtatgagaataaatggtgtctatgta 129  Q
    | |||||| ||||||||||||||||||||    
T  13811797 gatgtatgggaataaatggtgtctatgta 13811825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 40145457 - 40145585
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||| | |||||| |||||| |    
T  40145457 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcacgaggtgtacaagggtat 40145556  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||| |||||||||||| ||||    
T  40145557 atgagaataaagggtgtctatgtatcatt 40145585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15409665 - 15409528
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||   ||  |||| |||  |||| |||||| |||||||  | || ||||||||||||||  || |||||||||| |||    
T  15409665 cacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctcttttctctcctcttctctcttcctaatgtatggggtgtacaag 15409566  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||| ||||||| ||||| |||||||||||||||    
T  15409565 ggtgtatgcgaataaagggtgtttatgtaacattttcc 15409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36732997 - 36732872
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||| |  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||| |||||| |||    
T  36732997 cacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaag 36732898  T
Q  101 ggtgtatgagaataaatggtgtctat 126  Q
    |||||||| ||||||| |||||||||    
T  36732897 ggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 3921320 - 3921180
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  3921320 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 3921221  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctta 141  Q
    ||||||||  | |||| ||||||||||||||||||||||||    
T  3921220 ggtgtatgcaattaaaaggtgtctatgtaacattttcctta 3921180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 2252223 - 2252085
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  2252223 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 2252124  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  | |||| ||||||||||||||||||||||    
T  2252123 ggtgtatgcaattaaaaggtgtctatgtaacattttcct 2252085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 16327946 - 16328083
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||||||| ||||||| | | || |||| |||||||| ||||||||||  |||||||||| |||  |  |||||||||| ||     
T  16327946 cacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcattttctcttctctctccctaatatatggggtgtagaaa 16328045  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
     || ||||| |||||||||||| ||| |||||||||||    
T  16328046 agtatatgaaaataaatggtgtttatctaacattttcc 16328083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 36875637 - 36875537
Alignment:
Q  31 gtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaa 130  Q
    |||||||||  |||| ||||||||||||||  | || ||||||||||||||  | ||||||||||| ||||||| |    ||||||||||||||||||||    
T  36875637 gtggatcccgcacaagcacactttctcttttttctcctcttctctcttcctaatacatggggtgtacaagggtgga----aataaatggtgtctatgtaa 36875542  T
Q  131 cattt 135  Q
    |||||    
T  36875541 cattt 36875537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 21370057 - 21370186
Alignment:
Q  9 caaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatg 108  Q
    ||||||||||||| ||| ||| ||||| |||  |||| |||| |||||||||| | || |||||| ||||||| ||  ||  | |||| || ||||||||    
T  21370057 caaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctcatcttctttcttcctagtatataagatgtacaaaggtgtatg 21370156  T
Q  109 agaataaatggtgtctatgtaacattttcc 138  Q
    | |||||| ||||| |||||||||||||||    
T  21370157 aaaataaagggtgtttatgtaacattttcc 21370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42414357 - 42414277
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcct 81  Q
    |||| |||||||||||||||||||  ||||||||| |||  |||| |||||||| |||||  |||| ||||||||||||||    
T  42414357 cacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcct 42414277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 39688905 - 39688814
Alignment:
Q  48 acactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||||||||| | |  ||||||||||||||  | ||| ||||||| || ||||||||  | |||| ||||||||||||||||||||||    
T  39688905 acactttctctttcttcttttcttctctcttcctaatacatagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacattttcct 39688814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 6260010 - 6259917
Alignment:
Q  47 cacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||||||||| || ||||||||||  ||  || ||||| |||| ||| ||||||  ||||||| | | |||||||||||||||||||    
T  6260010 cacactttctctttcatctcctcttctctctcactaatgtatgggatgtacaagtgtgtataggaataaaggatatctatgtaacattttcctt 6259917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 20073530 - 20073433
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||| |||||||||| |||| | || |||||||||||||| || |||| | | || || ||||||||||||||||   ||||||| ||||||||||||    
T  20073530 acaagcacactttctatttcctctcctcttctctcttcctagttcatgagatttacaaaggtgtatgagaataaaaaatgtctatctaacattttcct 20073433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 9604391 - 9604430
Alignment:
Q  516 ataatgctttccacactcctcaatttaatatatattttta 555  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  9604391 ataatgctttccacattcctcagtttaatatatattttta 9604430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28177820 - 28177914
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgt 95  Q
    |||| |||||||||||||||||||| |||  |||| |||  |||| ||||||||||||||  | || ||||| ||||||||  || |||||||||    
T  28177820 cacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctcttttctctcctcttccctcttcctaatgtatggggtgt 28177914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 25831339 - 25831392
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcat 63  Q
    |||||||| ||||||| ||||||||| |||| |||| |||| ||||||||||||    
T  25831339 aaaaatctaacacgtggtcatgtggaccccacacaaacacattttctctttcat 25831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 42354634 - 42354504
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||||||| ||||||||||| || | || ||||||||||||||||| |  |||||||||||||| |||||||||||||| ||||||||||||    
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatga 42354535  T
Q  110 gaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||||||||||||||||||||||||    
T  42354534 gaataaatggtgtctatgtaacattttcctt 42354504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5957875 - 5958011
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||||||||||||||||||| | || |||||||||||||| ||||||| |||||| |||    
T  5957875 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcctctcctcttctctcttcctagtgcatgaggtgtacaag 5957974  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  5957975 ggtgtatgagaataaagggtgtttatgtaacattttc 5958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 8841487 - 8841350
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||| | || |||||||| ||||| |||||||||||||| |||    
T  8841487 cacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctcttttcctagtgcatggggtgtacaag 8841388  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
     |||||||||||||||||||||||||||||||||||||    
T  8841387 agtgtatgagaataaatggtgtctatgtaacattttcc 8841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10284686 - 10284549
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||| ||||||||  ||| ||||| |||  |||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| |||    
T  10284686 cacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctttcctttcatcttctctcttcctagtgcatggggtgtacaag 10284587  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    | ||||| |||||||| |||||||||||||||||||||    
T  10284586 gttgtataagaataaaaggtgtctatgtaacattttcc 10284549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12831092 - 12831225
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  12831092 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 12831191  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||||||||||||||||||| ||||    
T  12831192 ggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 37038524 - 37038661
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||| |||| | || |||||||||||||| |||||||||||||| |||    
T  37038524 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtgcatggggtgtacaag 37038623  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||   |||||| ||||| |||||||||||||||    
T  37038624 ggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 43414636 - 43414498
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||| |||  ||||||||  |||| ||||||||||||||  | || ||||||||||||||  || |||||||||| |||    
T  43414636 cacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaag 43414537  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  |||||| ||||||||||||||||||||||    
T  43414536 ggtgtatggcaataaagggtgtctatgtaacattttcct 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 504176 - 504043
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||| ||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  504176 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttttctctcatcttctctcttcctaatgcatggggtgtacaag 504077  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  504076 ggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 34012351 - 34012218
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||| ||||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  34012351 cacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 34012252  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||| ||||||||| |||||||||||| ||||    
T  34012251 ggtgtacgagaataaagggtgtctatgtatcatt 34012218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 6457629 - 6457525
Alignment:
Q  221 agcaaatctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattcgccttctacaagtaagtttcaaatcta 320  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||| |||||| ||  ||||| ||    
T  6457629 agcaagtctgcatggatgacagatgaagaatttggaagagagatggttgctggtgtaaatcctaatgtgattcgccttcttcaagtatgtaccaaatgta 6457530  T
Q  321 ttctt 325  Q
    |||||    
T  6457529 ttctt 6457525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 42221560 - 42221698
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||| || |||||||||||||   |  || ||||||| |||    
T  42221560 cacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctctttcatctcatcttctctcttccaaatatatagggtgtacaag 42221659  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  |||||| | ||| ||| ||||||||||||    
T  42221660 ggtgtatgtaaataaaggatgtttatataacattttcct 42221698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 14547967 - 14548100
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  14547967 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 14548066  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  14548067 gatgtatgggaataaagggtgtctatgtatcatt 14548100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23122652 - 23122519
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  | || ||||||||||||||  | || | ||||||||||||  ||||||||||||| |||    
T  23122652 cacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttttctctcctgttctctcttcctaatgcatggggtgtacaag 23122553  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  23122552 ggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 40423993 - 40423864
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||||  | || ||||||||||||||  | |||| |||||| ||||||||    
T  40423993 acacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatgaggtgtacaagggtgt 40423894  T
Q  106 atgagaataaatggtgtctatgtaacattt 135  Q
    ||| ||||||| |||||||||||| |||||    
T  40423893 atgggaataaaaggtgtctatgtatcattt 40423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44507142 - 44507010
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| ||| ||||| || |||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  44507142 cacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaag 44507043  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||||  |||||||||| ||||    
T  44507042 ggtgtatgagaataaat-atgtctatgtatcatt 44507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 6451445 - 6451351
Alignment:
Q  216 tagtcagcaaatctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattcgccttctacaagtaagt 310  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| |||  ||||||||| ||||| |||||||||    
T  6451445 tagttagcaagtctgcatggaatactgatgaagaatttggaagagagatgcttgctggtgtaaatcctaatgtgattcgtcttcttcaagtaagt 6451351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1179995 - 1179870
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  |||||||||| ||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  1179995 cacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 1179896  T
Q  101 ggtgtatgagaataaatggtgtctat 126  Q
    | | |||| ||||||| | |||||||    
T  1179895 gatatatgggaataaaggatgtctat 1179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9122230 - 9122363
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  9122230 cacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 9122329  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
     ||||||| |||||||   |||||||||| ||||    
T  9122330 agtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16056456 - 16056322
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  16056456 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 16056357  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattt 135  Q
    ||||||||  | |||| ||||||||||||||||||    
T  16056356 ggtgtatgcaattaaaaggtgtctatgtaacattt 16056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 17443875 - 17444005
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||  ||||||||| |||| ||||  |||||||||||||||| |  |||||||||||||  ||||||| | |||| |||| |||    
T  17443875 acacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctttcatcttctcttctctcttcccagtgcatgagttgtacaaggatgt 17443974  T
Q  106 atgagaataaatggtgtctatgtaacatttt 136  Q
    ||    ||||| |||||||||||||||||||    
T  17443975 attcttataaagggtgtctatgtaacatttt 17444005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15197378 - 15197511
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || |||| ||||||||   |||||| |||||| |||    
T  15197378 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttccaaatgcatgaggtgtacaag 15197477  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| |||||||  ||||||||||| ||||    
T  15197478 ggtgtatgggaataaaaagtgtctatgtatcatt 15197511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 32708012 - 32707921
Alignment:
Q  47 cacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||||||||| | |  ||||||||||||||  | ||||||||||| |||||||||||  | |||| |||||||||||||||||||||    
T  32708012 cacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 32707921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 15048232 - 15048098
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttc-atttcgtcttctctcttcctggtgcatggggtgtataagggtg 104  Q
    |||||||||||||||||||   ||  |||| |||  |||| ||||||||||||||  || || ||||||||||||||  || ||||| |||| |||||||    
T  15048232 acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctctttttatctcctcttctctcttcctaatgtatgggatgtacaagggtg 15048133  T
Q  105 tatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||  ||||||| ||||||||| ||||||||||||    
T  15048132 tatcggaataaagggtgtctatataacattttcct 15048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24307848 - 24307715
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||| | |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  24307848 cacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 24307749  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  | |||| |||||||||||||||||    
T  24307748 ggtgtatgcaattaaaaggtgtctatgtaacatt 24307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 4854877 - 4854781
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||| ||||||||||||||  | || ||||||||||| ||  || ||||| |||| |||||| ||||||||||||  ||||||||||||||||||||    
T  4854877 acaagcacactttctcttttctctcctcttctctcttactaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacattttcc 4854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 32032774 - 32032906
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  ||| |||||||   ||||  ||||||||||||||   |  ||||||||||||||  | |||| |||||| ||||||||    
T  32032774 acacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctctttctccttctcttctctcttcctaatacatgaggtgtacaagggtgt 32032873  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    |||  | |||| |||||||||||||||||||||    
T  32032874 atgcaattaaaaggtgtctatgtaacattttcc 32032906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 30183923 - 30183790
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtat 107  Q
    |||||||||||| |||| ||||| ||||   |||| || |||||||||||||||||| | |||||| ||||||   |  |||||||||| ||| ||||||    
T  30183923 acaaaaatctgatacgtaatcatatggacttcatataagcacactttctctttcatt-catcttctttcttccaaatatatggggtgtacaagagtgtat 30183825  T
Q  108 gagaataaatggtgtctatgtaacattttccttat 142  Q
    |  |||||| | ||||||| |||||||||||||||    
T  30183824 gtaaataaaggatgtctatctaacattttccttat 30183790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 775 - 848
Target Start/End: Complemental strand, 6451080 - 6451007
Alignment:
Q  775 gtgattgaaattaaacttgtgaaacaggcacttaatggtcaaagattattcatcttagattatcatgatgcatt 848  Q
    ||||||||||||||  ||||| ||||||||||| ||||  | ||||||||| |||||||||| |||||||||||    
T  6451080 gtgattgaaattaattttgtggaacaggcacttgatggaaagagattattcctcttagattaccatgatgcatt 6451007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34307261 - 34307394
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| || | |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  34307261 cacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 34307360  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  | |||| |||||||||||||||||    
T  34307361 ggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 42710301 - 42710216
Alignment:
Q  49 cactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||  | || ||||||||||||||  || |||||||||| ||||||||||| ||||||| ||||||| |||| ||||    
T  42710301 cactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcatt 42710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 6263852 - 6263800
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaa 279  Q
    |||||||||||||||||||| |||||||||||||||||  ||||||| |||||    
T  6263852 tctgcatggatgactgatgatgaatttggaagagagattcttgctggtgtaaa 6263800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 40467786 - 40467882
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||| ||||||||||||||| | || |||||||||||||| ||  |||||||||| ||   | |||| | ||||| |||||||||||||||||||||    
T  40467786 acaagcacactttctctttcctctcatcttctctcttcctagtctatggggtgtacaaaaatttatggggataaaaggtgtctatgtaacattttcc 40467882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 30479482 - 30479396
Alignment:
Q  48 acactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||||||||||  | |||| |||||||||||||||||    
T  30479482 acactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 6275098 - 6275044
Alignment:
Q  225 aatctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaa 279  Q
    |||||| |||||||||||| |||||||||  |||||||||| ||||||| |||||    
T  6275098 aatctggatggatgactgacgaagaatttacaagagagatgattgctggtgtaaa 6275044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 6289583 - 6289537
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctgg 273  Q
    |||| ||||||||||||||||||||||  |||||||||| |||||||    
T  6289583 tctggatggatgactgatgaagaatttacaagagagatgattgctgg 6289537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 6321965 - 6321919
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctgg 273  Q
    ||||| |||||||||||||||||||||| ||| |||||| |||||||    
T  6321965 tctgcgtggatgactgatgaagaatttgcaagggagatgattgctgg 6321919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 6332539 - 6332493
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctgg 273  Q
    ||||||||||||||||||| |||||||| ||| |||||| |||||||    
T  6332539 tctgcatggatgactgatggagaatttgcaagggagatgattgctgg 6332493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 6363731 - 6363685
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctgg 273  Q
    |||||||||||||||||||| ||||||| ||| |||||| |||||||    
T  6363731 tctgcatggatgactgatgaggaatttgcaagggagatgattgctgg 6363685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 20074907 - 20074869
Alignment:
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  20074907 ggtgtatgagaataaaatgtgtctatgtaacattttcct 20074869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 6391539 - 6391494
Alignment:
Q  228 ctgcatggatgactgatgaagaatttggaagagagatggttgctgg 273  Q
    ||||||||||||||||||| ||||||| ||| |||||| |||||||    
T  6391539 ctgcatggatgactgatgaggaatttgcaagggagatgattgctgg 6391494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 6424622 - 6424573
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctggagt 276  Q
    ||||| |||||||||||||| ||||||| ||| |||||| ||||||||||    
T  6424622 tctgcgtggatgactgatgaggaatttgcaagggagatgattgctggagt 6424573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 775 - 848
Target Start/End: Complemental strand, 6457265 - 6457192
Alignment:
Q  775 gtgattgaaattaaacttgtgaaacaggcacttaatggtcaaagattattcatcttagattatcatgatgcatt 848  Q
    ||||||||||||||  || || |||||||||| |||||  | | ||||||| |||||||||| |||||||||||    
T  6457265 gtgattgaaattaattttatggaacaggcactcaatggaaagaaattattcctcttagattaccatgatgcatt 6457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 2e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 31953085 - 31952946
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||| ||| ||||||||| | || |||| ||||||||||||||||| |  |||||||||||||| |||||||||||||| |||    
T  31953085 cacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaag 31952986  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  31952985 gatgtatgagaataaatggtgtctatgtaacattttcctt 31952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 11427663 - 11427796
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  11427663 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 11427762  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  11427763 ggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 31976293 - 31976430
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||| |||  || | |||  |||| ||||||||||||||  | || ||||||||||||||  || |||||||||| |||    
T  31976293 cacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaag 31976392  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31976393 ggtgtatgagaataaatggtgtctatgtaacattttcc 31976430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 28536541 - 28536408
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||   ||||||||| |||| |||| |||||||||||||| || |  ||||| ||||||||  ||||||||||||| |||    
T  28536541 cacccacacaaaaatctgacacgg--tcatgtggaccccacacaagcacactttctcttttatcttctcttccctcttcctactgcatggggtgtacaag 28536444  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    ||||||||| |||||||| |||| ||||||||||||    
T  28536443 ggtgtatgaaaataaatgatgtcgatgtaacatttt 28536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17598599 - 17598732
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  17598599 cacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 17598698  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  17598699 ggtgtatggaaataaaaggtgtctatgtatcatt 17598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 29857872 - 29858005
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | |||||||||  | || ||||||||||||||  | |  ||||||||||||||  ||||||||||||| |||    
T  29857872 cacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaag 29857971  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| |||||||||||||||||||| ||||    
T  29857972 ggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 32869723 - 32869856
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  32869723 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 32869822  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  32869823 gatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 4231593 - 4231730
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  4231593 cacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 4231692  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| |||||||||||||||||||||    
T  4231693 ggtgtatgcaattaaaaggtgtctatgtaacattttcc 4231730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 22880713 - 22880580
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||| ||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  | ||||||||||| |||    
T  22880713 cacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatggggtgtacaag 22880614  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||||||||| |||||| ||||    
T  22880613 ggtgtatgggaataaatggtgtatatgtatcatt 22880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23128182 - 23128075
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||| |||| ||||||||||||||  | || |||| |||||||||  |||||||| |||| |||    
T  23128182 cacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgcatgggatgtacaag 23128083  T
Q  101 ggtgtatg 108  Q
    ||||||||    
T  23128082 ggtgtatg 23128075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 30341415 - 30341277
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  30341415 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 30341316  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  | |||| ||||||||||||||||||||||    
T  30341315 ggtgtatgcaattaaaaggtgtctatgtaacattttcct 30341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 15990097 - 15989960
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  15990097 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 15989998  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| |||||||||||||||||||||    
T  15989997 ggtgtatgcaattaaaaggtgtctatgtaacattttcc 15989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 15508079 - 15507940
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  15508079 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 15507980  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    | ||||||  | |||| |||||||||||||||||||||||    
T  15507979 gatgtatgcaattaaaaggtgtctatgtaacattttcctt 15507940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 22422043 - 22421997
Alignment:
Q  92 gtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 22421997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12732527 - 12732665
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||   |||||||||||| | || |||| |||||||||||| || ||||||||||| || || |||  |||| | ||     
T  12732527 cacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctctttcatctcctcttctctctttctagtacataaggtgcacaaa 12732626  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
      ||||||  |||||| | |||||||||||||||||||||    
T  12732627 aatgtatggaaataaa-gatgtctatgtaacattttcctt 12732665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 31110810 - 31110679
Alignment:
Q  7 cacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgta 106  Q
    |||||||||||||||||| | ||  |||| ||   |||| ||||||||||||||  | |  ||||||||||||||  || |||||||||| || ||||||    
T  31110810 cacaaaaatctgacacgtaaccacatggaccctgcacaagcacactttctcttttctctactcttctctcttcctaatgtatggggtgtacaaaggtgta 31110711  T
Q  107 tgagaataaatggtgtctatgtaacattttcc 138  Q
    ||  |||||| | |||||||||||||||||||    
T  31110710 tggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15832622 - 15832755
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||| ||||||||  ||| ||||||||   ||||  ||| |||||||||  | || |||||| |||||||  ||||||||||||| |||    
T  15832622 cacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttttttctcctcttctatcttcctaatgcatggggtgtacaag 15832721  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||  ||||||| |||||||| ||| ||||    
T  15832722 ggtgtattggaataaagggtgtctacgtatcatt 15832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 30870100 - 30870193
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||| |||| |||||||||| | || ||||||||||| || ||  || ||||||| || ||||||||| |||||| ||||||||| |||||||||    
T  30870100 acaagcacattttctctttcctctcctcttctctctttctagtatatagggtgtacaaaggtgtatgaaaataaagggtgtctat-taacatttt 30870193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 9379760 - 9379687
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcct 81  Q
    |||||||| |||||||||  |||||||||| || |||| |||| |||||||||||| |  |||| |||||||||    
T  9379760 acaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctttcatcttctcttttctcttcct 9379687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 5e-37; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35536671 - 35536810
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||| ||||||||| ||||||||| |  | |||| ||||||| ||||||||| |  |||||||||||||| |||||||||||||| |||    
T  35536671 cacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcctagtgcatggggtgtagaag 35536770  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35536771 ggtgtatgagaataaatggtgtctatgtaacattttcctt 35536810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20764970 - 20764831
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||  ||  |||| ||| ||||| ||||||||||||||  | || ||||||||||||||  || |||||||||| |||    
T  20764970 cacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatgtatggggtgtacaag 20764871  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20764870 ggtgtatgagaataaatggtgtctatgtaacattttcctt 20764831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8076438 - 8076576
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||| | || |||||||||||||| |||||||||||||| ||     
T  8076438 cacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaaa 8076537  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
     ||||||||||||||||||||||||||||||||||||||    
T  8076538 agtgtatgagaataaatggtgtctatgtaacattttcct 8076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 14623894 - 14623757
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||| ||| ||||||||| | || |||| ||||||||||||||||| |  ||||||||||| || ||||||| |||||| |||    
T  14623894 cacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctttctagtgcatgaggtgtagaag 14623795  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    | ||||||||||||||||||||||||||||||||||||    
T  14623794 gatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 30801783 - 30801649
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||| ||||| ||  |||| |||| |||| |||| |||| |||||||||| | || |||||||||||||| || ||||||||||| ||||||||    
T  30801783 acacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcctctcatcttctctcttcctagtacatggggtgtacaagggtgt 30801684  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||| |||||||||||||||||||||||    
T  30801683 atgagaataaaaggtgtctatgtaacattttcctt 30801649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 13898110 - 13897975
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||||||| ||||||||| | || |||| ||||||||||||||||| |  |||||||||| ||| ||| |||||||||| ||     
T  13898110 cacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctccctagtgtatggggtgtagaaa 13898011  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
     ||||||||||||||||||||||||| |||||||||    
T  13898010 agtgtatgagaataaatggtgtctatctaacatttt 13897975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8956807 - 8956949
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||| ||||||||| ||||||||| |  | |||| ||||||| ||||||||| |  |||||||||||||| |||||  ||||||| |||    
T  8956807 cacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcctagtgcacagggtgtagaag 8956906  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttccttata 143  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  8956907 ggtgtatgagaataaatgctgtctatgtaacattttccatata 8956949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 33644245 - 33644378
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||||||||||||    
T  33644245 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtataag 33644344  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  33644345 ggtgtatgggaataaagggtgtctatgtatcatt 33644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17470450 - 17470583
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| ||     
T  17470450 cacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttctctcatcttctctcttcctaatgcatgggatgtacaaa 17470549  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
      ||||||||||||||||||||||||||| ||||    
T  17470550 tatgtatgagaataaatggtgtctatgtatcatt 17470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 35093638 - 35093767
Alignment:
Q  9 caaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatg 108  Q
    ||||||||||||| ||| ||||||| |  |||||||| ||||||||||||| ||| |  | |||||||||||| ||||||| | |||| || ||||||||    
T  35093638 caaaaatctgacatgtggtcatgtgaactccatacaagcacactttctcttgcatctttttttctctcttcctagtgcatgagatgtacaaaggtgtatg 35093737  T
Q  109 agaataaatggtgtctatgtaacattttcc 138  Q
    |||||||||| |||||| ||||||||||||    
T  35093738 agaataaatgatgtctaggtaacattttcc 35093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 49607459 - 49607592
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||| |||| ||||||||||||||  | || |||| |||||||||  ||||||  ||||| |||    
T  49607459 cacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgcatgacgtgtacaag 49607558  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  49607559 ggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 53982056 - 53982189
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  53982056 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 53982155  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  53982156 gttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 33118906 - 33118767
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtc-ttctctcttcctggtgcatggggtgtataa 99  Q
    |||| |||||||||| ||||||||  ||| |||||||||  | || ||||||||||||||| | || || |||||||| ||| |||||||||||||| ||    
T  33118906 cacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctttcctctcctccttctctctccctagtgcatggggtgtacaa 33118807  T
Q  100 gggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||||  |||||| |||||||| |||||||||||||    
T  33118806 gggtgtatggaaataaagggtgtctacgtaacattttcct 33118767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26141587 - 26141446
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttct--ctcttcctggtgcatggggtgtata 98  Q
    |||| |||||||||||||||||||| |||  |||| |||| |||| ||||||||||||||  | || ||||||  ||||||||  || |||||||||| |    
T  26141587 cacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctcttttctctcctcttctttctcttcctaatgtatggggtgtaca 26141488  T
Q  99 agggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    || |||||||  |||||| |||||||||||||||||||||||    
T  26141487 agagtgtatggaaataaagggtgtctatgtaacattttcctt 26141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31456734 - 31456867
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||||  | || |||| |||||||||  ||||||||||||| |||    
T  31456734 cacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcatggggtgtacaag 31456833  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||| ||| ||||||| ||||| |||||| ||||    
T  31456834 ggtgcatgggaataaagggtgtttatgtatcatt 31456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52629345 - 52629478
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| |||    
T  52629345 cacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatgcatgggatgtacaag 52629444  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||  |||||||||||| ||||    
T  52629445 ggtgtatggaaataatgggtgtctatgtatcatt 52629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 54868950 - 54868817
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | ||||| |||  |||||||||||||||||||  | || ||||||||||||||  ||||| ||||||| |||    
T  54868950 cacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatagggtgtacaag 54868851  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  54868850 ggtgtatggaaataaaaggtgtctatgtatcatt 54868817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 11347972 - 11347840
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    ||||||||||||||||||||  ||  |||| ||   | || ||||||||||||||  | || ||||||||||||||  || |||||||||||||||||||    
T  11347972 acacaaaaatctgacacgtggccacatggaccctgcataagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtataagggtgt 11347873  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    ||| ||||||| |||||||||||| ||||||||    
T  11347872 atgggaataaagggtgtctatgtaccattttcc 11347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24700009 - 24699871
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| ||||||||| ||||||  || ||||| ||  ||||| ||||||||||||||| | || |||||||||||||| ||  ||| |||||||||     
T  24700009 cacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctctttcctctcctcttctctcttcctagtttatgaggtgtataa- 24699911  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    | |||||||||||||| | |||||||||||||||||||||    
T  24699910 gatgtatgagaataaaagatgtctatgtaacattttcctt 24699871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 25407193 - 25407065
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| || ||||||||||  ||  || ||  |||||||||   | ||| |    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctctttcatctcctcttctctctcactaatgtataaggtgtataaatatatataa 25407094  T
Q  110 gaataaatggtgtctatgtaacattttcc 138  Q
    ||||||| |||| |||| |||||||||||    
T  25407093 gaataaagggtgactatataacattttcc 25407065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 51419415 - 51419275
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||  ||  | || |||  |||| ||||||||||||||  | || | ||||||||||||  || |||||||||| |||    
T  51419415 cacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttttctctcctattctctcttcctaatgtatggggtgtacaag 51419316  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctta 141  Q
    ||||||||  |||||| ||||| ||||||||||||||||||    
T  51419315 ggtgtatggaaataaaaggtgtttatgtaacattttcctta 51419275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 136
Target Start/End: Original strand, 43746425 - 43746519
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||| |||| |||||||||||| || |||||| ||||||| ||||||| |||||| |||||||||||| || ||| ||||| |||||||||||||    
T  43746425 acaaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatttt 43746519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 35965796 - 35965700
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||| ||||||||||||||| | || |||| ||| ||| |  | |||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  35965796 acaagcacactttctctttcctctcctcttttcttttcttaattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 35965700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 45058608 - 45058469
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||| |||| ||| |||| |||  ||||  | |||||||||||| | |  ||||||||||||||  | ||||||||||| ||     
T  45058608 cacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatggggtgtacaat 45058509  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||  | |||| |||||||||||||||||||||||    
T  45058508 ggtgtatgcaattaaaaggtgtctatgtaacattttcctt 45058469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 26754745 - 26754879
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||| |||  |||| |||  |||| |||| |||||||||| | || |||||||||||||| |   || ||||||| || |||||    
T  26754745 acacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctcttcctagaatatagggtgtacaaaggtgt 26754844  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||  ||||||  ||||||||||||||||||||||    
T  26754845 atggaaataaagagtgtctatgtaacattttcctt 26754879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 36744661 - 36744727
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattc 293  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||| ||||| || ||||||||||    
T  36744661 tctgcatggatgactgatgaagaatttgcaagagaaatgcttgctggtgtaaatccatgtgtgattc 36744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 138
Target Start/End: Complemental strand, 21746207 - 21746106
Alignment:
Q  37 cccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    ||||||||| ||||||||||||||||| || |||||||||||||   |  ||| |||||| |||||||||||  |||||||| |||| |||||| |||||    
T  21746207 cccatacaagcacactttctctttcatctcatcttctctcttccaaatatatgaggtgtacaagggtgtatgtaaataaatgatgtccatgtaatatttt 21746108  T
Q  137 cc 138  Q
    ||    
T  21746107 cc 21746106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 36331384 - 36331247
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  36331384 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 36331285  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| | ||| |||||||||||||||    
T  36331284 ggtgtatgcaattaaaagatgtatatgtaacattttcc 36331247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 42823205 - 42823297
Alignment:
Q  50 actttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttccttat 142  Q
    |||||||||||| | |  ||||||||||||||  | |||| |||||| |||||||||||  | |||| |||||||||||||||||||||||||    
T  42823205 actttctctttcttattctcttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccttat 42823297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 41189819 - 41189680
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||| |||||||||  ||  |||| |||  |||| ||||||||||||||  | || |||||| |||||||  || |||| ||||| |||    
T  41189819 cacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatgtatggagtgtacaag 41189720  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
     |||||||  |||||| |||||||||||||||||||||||    
T  41189719 agtgtatggaaataaagggtgtctatgtaacattttcctt 41189680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 11095355 - 11095289
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||| |||||||||  ||||| ||||||| ||||||||||||||||||| |||||||||||| ||||    
T  11095355 tcttttctcttcctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11095289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 47531915 - 47532049
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||| |||||||||||||  ||| || | |||  |||| ||||||||||||||  | || | ||||||||||||  || ||||  |||| ||| ||||    
T  47531915 acacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttttctctcctattctctcttcctaatgtatggaatgtacaagtgtgt 47532014  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||| ||||||| ||||| |||||||||||||||||    
T  47532015 atgggaataaagggtgtttatgtaacattttcctt 47532049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 1758511 - 1758379
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||  || | | |||||  ||| |||| |||| |||||||||||| || ||||||||||||||  ||||| ||||||| ||     
T  1758511 cacccacacaaaaatctgacatatggttacgtggactccacacaaacacattttctctttcatctcctcttctctcttcctaatgcat-gggtgtacaaa 1758413  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||||||  |||||||  |||| |||||||||||||    
T  1758412 ggtgtat--gaataaacagtgtttatgtaacatttt 1758379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 9563053 - 9563177
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||||||  ||| ||||||||   |||| |||||||||||| |  | || ||||||||||||||  |||||| | |||| || ||||||||     
T  9563053 aaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctcttctctcctcttctctcttcctaatgcatgagttgtacaaaggtgtatgg 9563152  T
Q  110 gaataaatggtgtctatgtaacatt 134  Q
    ||||||| ||| |||||||| ||||    
T  9563153 gaataaagggtatctatgtatcatt 9563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 41080761 - 41080848
Alignment:
Q  9 caaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtat 97  Q
    ||||||||||| | ||| ||||||||| |||| |||| |||| |||||||||||| || |||||||||||||| || ||| ||||||||    
T  41080761 caaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctctttcatctcctcttctctcttcctagtacatagggtgtat 41080848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 36707437 - 36707350
Alignment:
Q  47 cacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||||  | || ||||||||||||||  |||||| |||||| |||  |||||| ||||||| |||||||||||| ||||    
T  36707437 cacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 48587146 - 48587023
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||| |||||||||||||||  ||| |||||||||  ||||  |||||||||||||          |||||||||||  |||||||| |||| |||    
T  48587146 cacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt----------tctctcttcctaatgcatgggatgtacaag 48587057  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||| |||| ||||||| |||||||||||| ||||    
T  48587056 ggtatatgggaataaagggtgtctatgtatcatt 48587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 48375754 - 48375626
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtat 107  Q
    |||||||||||||  ||| |||  |||| |||  |||| |||| |||||||||| | || |||||||||||||| |   || ||||||| || | |||||    
T  48375754 acaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctcttcctagaatatagggtgtacaaagatgtat 48375655  T
Q  108 gagaataaatggtgtctatgtaacatttt 136  Q
    |  |||||| |||||||||||||||||||    
T  48375654 ggaaataaagggtgtctatgtaacatttt 48375626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 39670065 - 39670188
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||| ||||||||||||||||||| | | ||||  ||||||| ||||||  | || |||||||||||| |  || ||| | |||| ||||||||| |     
T  39670065 aaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttttctctcctcttctctcttcttaatgtatgagatgtacaagggtgtacgg 39670164  T
Q  110 gaataaatggtgtctatgtaacat 133  Q
     |||||||| ||||| ||||||||    
T  39670165 aaataaatgatgtctgtgtaacat 39670188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 11140999 - 11140961
Alignment:
Q  100 gggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  11140999 gggtgtatgagactaaagggtgtctatgtaacattttcc 11140961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27714946 - 27714888
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctt 59  Q
    |||| |||||||||||||||||||  ||||||||| |||  |||| |||||||||||||    
T  27714946 cacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 1e-34; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 20700862 - 20700997
Alignment:
Q  3 cctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataaggg 102  Q
    ||||||||||||||||||||||  ||| ||||| |||  | || ||||||||||||||| | || |||||||||||||| |||||||||||||| |||||    
T  20700862 cctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaaggg 20700961  T
Q  103 tgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||| ||||||| |||||||||||||||||||||    
T  20700962 tgtatgggaataaagggtgtctatgtaacattttcc 20700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 7465790 - 7465657
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||| |||| |||||||||||||| || || ||||||||||||||  |||||| |||||| |||    
T  7465790 cacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttatctcttcttctctcttcctaatgcatgaggtgtacaag 7465691  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  7465690 ggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 10249437 - 10249304
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || |||| |||||||||  ||||||||||||| |||    
T  10249437 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaatgcatggggtgtacaag 10249338  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  10249337 ggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17473065 - 17473198
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  |||||| |||||| |||    
T  17473065 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaag 17473164  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  17473165 ggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28863500 - 28863633
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||||||| || || ||||||||||||||  |||||| |||||| |||    
T  28863500 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaag 28863599  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  28863600 ggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 19930870 - 19930742
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||| |||||| ||||||||    
T  19930870 acacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagggtgt 19930771  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||| ||||||| |||||||||||| ||||    
T  19930770 atgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33436155 - 33436029
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||| | || ||||||||||||||  |||||| |||||| |||    
T  33436155 cacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaag 33436056  T
Q  101 ggtgtatgagaataaatggtgtctatg 127  Q
    |||||||||||||||| ||||||||||    
T  33436055 ggtgtatgagaataaaaggtgtctatg 33436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 13438388 - 13438521
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  13438388 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 13438487  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  13438488 gatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32505703 - 32505570
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||| |||  | || |||||||||||| |  ||||||||||||| |||    
T  32505703 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattttctctcctcttctctcttcttaatgcatggggtgtacaag 32505604  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||||||  ||||||||||| ||||    
T  32505603 ggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40701523 - 40701656
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | ||||| |||  |||||||||||||||||||  | || ||||||||||||||  ||||| ||||||| |||    
T  40701523 cacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcctaatgcatcgggtgtacaag 40701622  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  40701623 ggtgtatggaaataaaaggtgtctatgtatcatt 40701656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 44151978 - 44152108
Alignment:
Q  10 aaaaatctgacacgtgatcatgtgg---atcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgta 106  Q
    |||||||||||||||| | |||| |   |||||| |||| ||||||||||||||||| || ||||||||||||||  |||||| | | || |||||||||    
T  44151978 aaaaatctgacacgtggttatgtagtgaatcccacacaagcacactttctctttcatctcctcttctctcttcctaatgcatgagatatacaagggtgta 44152077  T
Q  107 tgagaataaatggtgtctatgtaacattttc 137  Q
    || ||||||| ||||| ||||||||||||||    
T  44152078 tgcgaataaaaggtgtttatgtaacattttc 44152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9058525 - 9058640
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||||||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  9058525 cacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 9058624  T
Q  101 ggtgtatgagaataaa 116  Q
     ||||||| |||||||    
T  9058625 agtgtatgggaataaa 9058640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 17823864 - 17823971
Alignment:
Q  32 tggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaac 131  Q
    |||| ||||||||| ||||||||||||||||| || |||||||||||||   |  |||||||||| |||||||||||  |||||| | ||||||||||||    
T  17823864 tggaccccatacaagcacactttctctttcatctcatcttctctcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaac 17823963  T
Q  132 attttcct 139  Q
    ||||||||    
T  17823964 attttcct 17823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13365398 - 13365536
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||| ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  13365398 cacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 13365497  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||| |||  | |||| ||||||||||||||||||||||    
T  13365498 ggtgaatgcaattaaaaggtgtctatgtaacattttcct 13365536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40613957 - 40613819
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||  ||  |||| |||  |||| ||||||||||||||  | || | |||| ||||| |  || |||||||||| |||    
T  40613957 cacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctattctttcttcataatgtatggggtgtacaag 40613858  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  40613857 ggtgtatgggaataaagggtgtctatgtaacattttcct 40613819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3440024 - 3440165
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||| ||||| | ||||| |||  |||| |||| |||||||||| | || ||||||||||| || |   || ||||||| ||     
T  3440024 cacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctcctcttctctctttctagaatatagggtgtacaaa 3440123  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttccttat 142  Q
    ||||||||  |||||| |||||||||||||||||||||||||    
T  3440124 ggtgtatggaaataaagggtgtctatgtaacattttccttat 3440165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3737988 - 3738125
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| ||||||||| |||  |||| |||| ||||| |||| | || |||||| ||||||| |   || ||||||| ||     
T  3737988 cacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctcctcttctttcttcctagaatatagggtgtacaaa 3738087  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||| |||| | |||||||||||||||||||||    
T  3738088 ggtgtatgaaaatatagggtgtctatgtaacattttcc 3738125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 30915517 - 30915641
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||  | || ||||||||||||||  | ||||||||||| |||||||||||     
T  30915517 aaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatacatggggtgtacaagggtgtatgg 30915616  T
Q  110 gaataaatggtgtctatgtaacatt 134  Q
     |||||  | |||||||||| ||||    
T  30915617 aaataatggatgtctatgtatcatt 30915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 36168886 - 36169018
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||| |||||||||  ||  |||| |||  |||| || |||||||||||  | || | ||||||||||||  || |||||||||| ||| ||||    
T  36168886 acacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttttctctcctattctctcttcctaatgtatggggtgtacaagagtgt 36168985  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||||| ||||| |||||||||||||||    
T  36168986 atgagaataaagggtgtttatgtaacattttcc 36169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 38732399 - 38732538
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| |||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| | |||| |||    
T  38732399 cacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagatgtacaag 38732498  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    | ||||||  | |||| |||||||||||||||||||||||    
T  38732499 gatgtatgcaattaaaaggtgtctatgtaacattttcctt 38732538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 136
Target Start/End: Complemental strand, 21301550 - 21301420
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    ||||||||||| || |||||||||||||||  | | |||| |||||||||||||| || |  |||||| ||||||| ||||||| |||||| | | ||||    
T  21301550 acacaaaaatcagatacgtgatcatgtggactctacacaaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtacatgagtgt 21301451  T
Q  106 atgagaataaatggtgtctatgtaacatttt 136  Q
    |||  |||||| ||||| ||| |||||||||    
T  21301450 atggaaataaagggtgtgtatctaacatttt 21301420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 2533209 - 2533306
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||| |||||||| ||||| || || |||||||||||||   || |||||||||| ||||||||||| ||||||| ||||| ||| ||||||||||||    
T  2533209 acaagcacactttttcttttatctcctcttctctcttcccaatgtatggggtgtacaagggtgtatgggaataaagggtgtatatataacattttcct 2533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 17820059 - 17819923
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgta-taa 99  Q
    |||| |||||||||||||||| ||| | | ||||| |||| |||| |||| |||||||||||| || ||||||||||||||  |||||| ||||||  ||    
T  17820059 cacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctctttcatctcctcttctctcttcctaatgcatgaggtgtacaaa 17819960  T
Q  100 gggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
     ||| ||||||||| |||| ||| ||| ||||||||||    
T  17819959 aggtttatgagaat-aatgatgtttatataacattttc 17819923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 28381710 - 28381577
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  |||  ||||  ||  |||| ||||||||||||||  | || ||||||||||||||  |  |||||||||| |||    
T  28381710 cacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaag 28381611  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  28381610 gatgtatgggaataaagggtgtctatgtatcatt 28381577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 41758678 - 41758767
Alignment:
Q  47 cacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||| ||||||||| || || ||||||||||||||  |  |||||||||| |||| ||||||||||||||  ||||||||||||||||||    
T  41758678 cacattttctcttttatctcctcttctctcttcctaatatatggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatttt 41758767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 43490166 - 43490303
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  ||||||| |||||| | |  ||||||||||||||  | ||| ||||||| |||    
T  43490166 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatctttcttcttctcttctctcttcctaatacatagggtgtacaag 43490265  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| |||||||||||||||||||||    
T  43490266 ggtgtatgcaattaaaaggtgtctatgtaacattttcc 43490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 4060735 - 4060863
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  | | |||||||||  | || |||||||||| |||  | || ||||||||||||||  ||||||||||||| ||||||||    
T  4060735 acacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgt 4060834  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    |||  |||||| | ||| |||||| ||||    
T  4060835 atggaaataaaagatgtttatgtatcatt 4060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 15428790 - 15428663
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  |||||  | ||||  ||| |||| |||||||||||| || |||| |||||| || || |||||| |||| ||||||||    
T  15428790 acacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttctctttcatctcctcttttctctttctagtacatggg-tgtacaagggtgt 15428692  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    |||||  |||||| |||||||||||||||    
T  15428691 atgagggtaaatgatgtctatgtaacatt 15428663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 2997542 - 2997403
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||    
T  2997542 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 2997443  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||  | ||||  ||||||||||||||||| ||||    
T  2997442 ggtgtatgcaattaaaaagtgtctatgtaacatttccctt 2997403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 38882799 - 38882733
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||| |||||||||  ||||||||||||| ||||||||||| ||||||||||| |||||||| ||||    
T  38882799 tcttatctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcatt 38882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 42257238 - 42257376
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| ||||||||||||||||  ||  |||| |||  |||| ||||||||||||||  | || |||||| |||||||  || |||||||||| |||    
T  42257238 cacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcctaatgtatggggtgtacaag 42257337  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
     ||||||   |||||| ||||||||||||| ||||||||    
T  42257338 agtgtatagaaataaagggtgtctatgtaatattttcct 42257376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 38273197 - 38273061
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||   ||  |||| |||  || | ||||||||||||||  | || | ||||||||||||  || |||||||||| |||    
T  38273197 cacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctcttttctctcctattctctcttcctaatgtatggggtgtacaag 38273098  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
      |||||||||||||||||||| ||||||| |||||||    
T  38273097 a-tgtatgagaataaatggtgtttatgtaatattttcc 38273061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 3035033 - 3034901
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||| |||| |||| |||  ||||  | |||||||||||| | |  ||||||||||||||  | |||| ||||||  | |||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatgaggtgtaccaaggtgt 3034934  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    |||  | |||| |||||||||||||||||||||    
T  3034933 atgcaattaaaaggtgtctatgtaacattttcc 3034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33436256 - 33436385
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| ||||||||||||||||| ||||||||      |||| ||||||||||||||| | || |||||||||||||| || |||| ||||          
T  33436256 cacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttctctttcctatcctcttctctcttcctagttcatgaggtg------ 33436349  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
        |||||||||||| |||||||||||||||||||||||    
T  33436350 ----tatgagaataaaaggtgtctatgtaacattttcctt 33436385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 42693707 - 42693655
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaa 279  Q
    |||||||||||||||||||||||||||| |||||| ||| | |||||||||||    
T  42693707 tctgcatggatgactgatgaagaatttgcaagagaaatgctagctggagtaaa 42693655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 5574488 - 5574422
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||| |||||||||  ||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||    
T  5574488 tcttttctcttcctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 5574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 41575187 - 41575308
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatccc-atacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtg 104  Q
    |||||||||| ||||| ||| ||||||||| ||| | |||| ||||||||||||||||| || ||||||||| ||||  |||||| | ||||            
T  41575187 acacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctttcatctcctcttctctcgtcctaatgcatgagatgta-------- 41575278  T
Q  105 tatgagaataaatggtgtctatgtaacatttt 136  Q
      ||||||||||| ||||||||||||||||||    
T  41575279 --tgagaataaatagtgtctatgtaacatttt 41575308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 42688093 - 42688160
Alignment:
Q  227 tctgcatggatgactgatgaagaatttggaagagagatggttgctggagtaaacccttgtgtgattcg 294  Q
    |||||||||||||| |||||||| |||| |||||| ||| ||||||| ||||| |||||  |||||||    
T  42688093 tctgcatggatgacagatgaagagtttgcaagagaaatgcttgctggtgtaaatccttgcatgattcg 42688160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 27864808 - 27864869
Alignment:
Q  73 tctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||  | |||||| |||| ||||||||||||||||||| |||||| ||||| ||||    
T  27864808 tctcttcctaatacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcatt 27864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 29239936 - 29240070
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||| ||||||  ||| ||||| |||| |||| ||||||||||||||| | || |||||||||||||| |||||||||||||| ||| ||||    
T  29239936 acacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgt 29240035  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||| ||||||| |||||||||||||||||||||||    
T  29240036 atgggaataaagggtgtctatgtaacattttcctt 29240070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 50052483 - 50052345
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||| | || |||||||||||||| ||||||  |||||| ||     
T  50052483 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcataaggtgtacaaa 50052384  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  50052383 ggtgtatgggaataaagggtgtctatgtaacattttcct 50052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 6034089 - 6034222
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  6034089 cacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 6034188  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  6034189 ggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41823927 - 41824064
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  |||  |||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||| |||||| ||     
T  41823927 cacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatgaggtgtacaaa 41824026  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41824027 ggtgtatgagaataaatggtgtctatgtaacattttcc 41824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 50526226 - 50526088
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||| ||| |||||| ||  |||| ||| |||||| |||| | || |||||||||||||| |||||||||||||| |||    
T  50526226 cacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcctctcctcttctctcttcctagtgcatggggtgtacaag 50526127  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||   |||||| ||||| ||||||||||||||||    
T  50526126 ggtgtatagaaataaagggtgtttatgtaacattttcct 50526088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 48183104 - 48182971
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || |||||||||||| |  ||||||||||||| |||    
T  48183104 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcttaatgcatggggtgtacaag 48183005  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  48183004 ggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 28480318 - 28480182
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || |||||||||||||| ||||||| | |||| |||| |||    
T  28480318 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgt 28480219  T
Q  106 atgagaataaatggtgtctatgtaacattttccttat 142  Q
    ||    ||||| |||||||||||||||||||||||||    
T  28480218 attcttataaagggtgtctatgtaacattttccttat 28480182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 28481193 - 28481057
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || |||||||||||||| ||||||| | |||| |||| |||    
T  28481193 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgt 28481094  T
Q  106 atgagaataaatggtgtctatgtaacattttccttat 142  Q
    ||    ||||| |||||||||||||||||||||||||    
T  28481093 attcttataaagggtgtctatgtaacattttccttat 28481057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 28482068 - 28481932
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||  ||||||||| |||| |||| ||||||||||| ||||| || |||||||||||||| ||||||| | |||| |||| |||    
T  28482068 acacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgt 28481969  T
Q  106 atgagaataaatggtgtctatgtaacattttccttat 142  Q
    ||    ||||| |||||||||||||||||||||||||    
T  28481968 attcttataaagggtgtctatgtaacattttccttat 28481932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 41236397 - 41236525
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| ||||||||    
T  41236397 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgt 41236496  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||| ||||||| |||||||||||| ||||    
T  41236497 atgggaataaagggtgtctatgtatcatt 41236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 31910237 - 31910378
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||| |   ||  |||| |||  |||| ||||||||||||||  | || ||||||||||||||  || ||||| |||| |||    
T  31910237 cacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctcttttctctcatcttctctcttcctaatgtatgggatgtacaag 31910336  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttccttat 142  Q
     ||||||| |||||||||||||||||||||||||||||||||    
T  31910337 agtgtatgggaataaatggtgtctatgtaacattttccttat 31910378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 42044422 - 42044289
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| |||    
T  42044422 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaag 42044323  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  42044322 ggtgtatggaaataaagggtgtctatgtatcatt 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 19670766 - 19670632
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| ||||||||    
T  19670766 acacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagggtgt 19670667  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||  | |||| |||||||||||||||||||||||    
T  19670666 atgcaattaaaaggtgtctatgtaacattttcctt 19670632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 40574855 - 40574959
Alignment:
Q  32 tggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaac 131  Q
    ||||||||  |||| ||||||||||||||  | || ||||||||||||||  |  |||||||||| ||||||||||||||||||| ||||||||| ||||    
T  40574855 tggatcccgaacaagcacactttctcttttctctcctcttctctcttcctaatatatggggtgtacaagggtgtatgagaataaaaggtgtctatctaac 40574954  T
Q  132 atttt 136  Q
    |||||    
T  40574955 atttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 480502 - 480395
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| ||     
T  480502 cacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaaa 480403  T
Q  101 ggtgtatg 108  Q
    ||||||||    
T  480402 ggtgtatg 480395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 29548014 - 29547876
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| ||||||||  | ||  ||||||| |||||| | |  ||||||||||||||  | ||||||||||| |||    
T  29548014 cacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctttcttcttctcttctctcttcctaatacatggggtgtacaag 29547915  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  | |||| ||||||||||||||||||||||    
T  29547914 ggtgtatgcaattaaaaggtgtctatgtaacattttcct 29547876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23608280 - 23608413
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||| |  ||| |||| |||||||||||||| || || ||||||||||||||  |||||| |||||| | |    
T  23608280 cacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacagg 23608379  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| | |||||||||| ||||    
T  23608380 gatgtatgggaataaaggatgtctatgtatcatt 23608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3481699 - 3481828
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||| |  ||| ||||| |||| |||| ||||||||||||||| |  | ||||||||||| || ||||||          ||    
T  3481699 cacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctctttcctcccatcttctctctttctagtgcat----------ag 3481788  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  3481789 ggtgtatgagaataaagggtgtctatgtaacattttcctt 3481828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 29977930 - 29978065
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  |||| |||| |||| |||| ||||||||||||||||| |  |||| |||||  ||  || |||||||||| |||    
T  29977930 cacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctcttttctctcactaatgtatggggtgtacaag 29978029  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
     ||||||  ||||||| | | |||||||||||||||    
T  29978030 tgtgtataggaataaaagatatctatgtaacatttt 29978065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 47986258 - 47986391
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||||| |||| ||||||||    
T  47986258 acacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttattctcttctctcttcctaatacatgggatgtacaagggtgt 47986357  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||  ||| || |||||||||||||||||||||||    
T  47986358 atg-caattaaaggtgtctatgtaacattttcctt 47986391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 55475283 - 55475373
Alignment:
Q  48 acactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||||||||||  | |||| |||||||||||||||||||||    
T  55475283 acactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 55475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24995162 - 24995029
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||| ||||||||  ||| ||||| |||  |||| |||| |||||||||  | || |||||||||||| |  ||||||||||||| ||     
T  24995162 cacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttttctctcctcttctctcttcttaatgcatggggtgtacaat 24995063  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  24995062 ggtgtatgggaataaagggtgtctatgtatcatt 24995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 50813947 - 50813810
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| |||| || | |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| | |||| |||    
T  50813947 cacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagatgtacaag 50813848  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| |||||||||||||||||||||    
T  50813847 ggtgtatgcaattaaaaggtgtctatgtaacattttcc 50813810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 18924503 - 18924411
Alignment:
Q  48 acactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||||||||||  | |||| |||||||||||||||||||||||    
T  18924503 acactttctctttcttcttctcttctctcttcctaatacatgaggtgtaaaagggtgtatgcaattaaaaggtgtctatgtaacattttcctt 18924411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 48647781 - 48647645
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||| ||||||| ||| |||||  ||  |||| |||| |||||||||| | || |||||||||||||| |||||| |  |||| ||     
T  48647781 cacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcctcttctctcttcctagtgcatagaatgtacaaa 48647682  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    | ||||| | |||||||| ||||||||||||||||||    
T  48647681 gatgtataaaaataaatgatgtctatgtaacattttc 48647645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17983798 - 17983659
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||    
T  17983798 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 17983699  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||  | ||||  ||||||||||||||||| ||||    
T  17983698 ggtgtatgcaattaaaaagtgtctatgtaacatttccctt 17983659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18769102 - 18768972
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| ||||||  |||||| |||| |||| |||||||||||| || | || |||||||||  | ||| ||||||| |||    
T  18769102 cacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctcattttttctcttcctaatacat-gggtgtacaag 18769004  T
Q  101 ggtgtatgagaataaatggtgtctatgtaaca 132  Q
    | ||||||||  |||||| ||| |||||||||    
T  18769003 gatgtatgagggtaaatgatgtttatgtaaca 18768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 29234299 - 29234204
Alignment:
Q  2 acctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtat 97  Q
    |||| ||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||||    
T  29234299 accttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtat 29234204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29589795 - 29589656
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||| | |||  ||| |||| |||| ||||  |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||    
T  29589795 cacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 29589696  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
     |||||||  | |||| ||||||||||||| |||||||||    
T  29589695 agtgtatgcaattaaaaggtgtctatgtaatattttcctt 29589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 47104589 - 47104723
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||| ||||||||| |  | | || |||| |||| ||||||||||||||||| || |||||||||||| |  |||||| ||||||  ||    
T  47104589 cacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctcttctctcttcttaatgcatgaggtgtactag 47104688  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattt 135  Q
      |||| |||||||||  ||||||| |||||||||    
T  47104689 aatgtacgagaataaaaagtgtctacgtaacattt 47104723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11511517 - 11511385
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | |  |||||||||||| |  |||||| |||||| |||    
T  11511517 cacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctcttctcttctctcttcttaatgcatgaggtgtacaag 11511418  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  ||||||| ||||||||||| ||||    
T  11511417 ggtgtatggaaataaat-gtgtctatgtatcatt 11511385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 54473588 - 54473467
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||  |||| |||||||| |||||  | || ||||||||||||||  | ||||| ||||| |||    
T  54473588 cacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttttctctcctcttctctcttcctaatacatggagtgtacaag 54473489  T
Q  101 ggtgtatgagaataaatggtgt 122  Q
    |||||||| ||||||| |||||    
T  54473488 ggtgtatgggaataaagggtgt 54473467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 44536796 - 44536663
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||| |||| | || |||| | ||  |||||||||||||| | |  ||||||||||||||  | ||| ||||||| |||  |||    
T  44536796 acacaaaaatctgacatgtggtcatatagaccccacataagtacactttctctttcttcttctcttctctcttcctaatacatagggtgtacaagaatgt 44536697  T
Q  106 atgagaataaatggtgtctatgtaacattttcct 139  Q
    |||  | ||||  |||||||||||||||||||||    
T  44536696 atgcaattaaaatgtgtctatgtaacattttcct 44536663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 56300215 - 56300086
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||| |||| || ||||   |||| ||||||||||||||| | || ||||||||||| ||  || ||| | |||| |||  |||    
T  56300215 acacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctctttctaatgtatgagatgtacaagattgt 56300116  T
Q  106 atgagaataaatggtgtctatgtaacattt 135  Q
    |||||||||||   |||||| |||||||||    
T  56300115 atgagaataaagaatgtctacgtaacattt 56300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 2e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 41423731 - 41423864
Alignment:
Q  5 tacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtg 104  Q
    ||||||||||||||||| ||| ||| || |||||| ||||| || | |||||||||||| || |||||||||||||| |||||||||||||| || ||||    
T  41423731 tacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctctttcatctcctcttctctcttcctagtgcatggggtgtacaaaggtg 41423830  T
Q  105 tatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||||||| ||||| |||||||||||||||    
T  41423831 tatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35522921 - 35523060
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||||  ||| ||||||||  |||| ||||||||||||||  | || ||||||||||||||  || |||||||||| |||    
T  35522921 cacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttttctctcttcttctctcttcctaatgtatggggtgtacaag 35523020  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  35523021 ggtgtatgggaataaatggtgtttatgtaacattttcctt 35523060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 16374874 - 16374743
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||| ||| ||||||| || |||| ||||| ||||||||||| || | ||||||||||||  || |||| ||||| || |||||    
T  16374874 acacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctttttctctcttcctaatgtatggagtgtacaaaggtgt 16374775  T
Q  106 atgagaataaatggtgtctatgtaacattttc 137  Q
    ||||||||||| ||||||||||||||||||||    
T  16374774 atgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4999569 - 4999436
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||| ||||  ||| ||||| |||  |||| |||||||||||||| || || ||||||||||||||  ||||||||||||| |||    
T  4999569 cacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttttatctcctcttctctcttcctaatgcatggggtgtacaag 4999470  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  4999469 ggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 19329887 - 19330020
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||| |||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  19329887 cacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 19329986  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  19329987 ggtgtatgggaataaagggtgtctatgtatcatt 19330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 40957757 - 40957885
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||||||| ||||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| ||||||||    
T  40957757 acacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttttctctcatcttctctcttcctaatgcatggggtgtacaagggtgt 40957856  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    |||| |||||  |||||||||||| ||||    
T  40957857 atgaaaataatgggtgtctatgtatcatt 40957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8080438 - 8080305
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||| |||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  8080438 cacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctattgcatggggtgtacaag 8080339  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  8080338 ggtgtatgggaataaagggtgtctatgtatcatt 8080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19436242 - 19436114
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  | || ||||||||||||||  | |  |||| |||||||||  ||||||||||||| |||    
T  19436242 cacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttttctcttctcttttctcttcctaatgcatggggtgtacaag 19436143  T
Q  101 ggtgtatgagaataaatggtgtctatgta 129  Q
    |||||||||||||||||||||||||||||    
T  19436142 ggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38837262 - 38837395
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    ||||||||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| |||    
T  38837262 cacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaag 38837361  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||| |||||||||||| ||||    
T  38837362 ggtgtatggaaataaagggtgtctatgtatcatt 38837395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 35468910 - 35468773
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||| | | |||| |||||||| ||   |||| ||||||||||||||| | || |||||||||||||| || |||| | ||||||||    
T  35468910 cacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttctctttcctatcctcttctctcttcctagttcatgagatgtataag 35468811  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    | |||||||||||||| ||||| |||||||||||||||    
T  35468810 gatgtatgagaataaaaggtgtatatgtaacattttcc 35468773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 39255971 - 39255839
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtat 107  Q
    ||||||||||||||||||  || |||||  ||| ||||  |||||||||||||||| || ||||||||||||| |||| || |  |||| ||||||||||    
T  39255971 acaaaaatctgacacgtgg-cacgtggactccacacaagaacactttctctttcatctcctcttctctcttcccggtggatagaatgtacaagggtgtat 39255873  T
Q  108 gagaataaatggtgtctatgtaacattttcctta 141  Q
    || |||||| ||||||||||||||||||| ||||    
T  39255872 gataataaagggtgtctatgtaacatttttctta 39255839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 32951543 - 32951415
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  | ||||||||||| ||||||||    
T  32951543 acacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatacatggggtgtacaagggtgt 32951444  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||  |||||||||||| ||||    
T  32951443 atgagaataaggggtgtctatgtatcatt 32951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 27744359 - 27744224
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  || |||||||||  | || |||| ||||||| || | || |||||||||||||| ||||||||| |||| |||| | |    
T  27744359 acacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctcctcttctctcttcctagtgcatgggatgtacaaggatat 27744260  T
Q  106 atgagaataaatggtgtctatgtaacattttcctta 141  Q
    ||| ||||||||||||| ||| ||||||||||||||    
T  27744259 atgggaataaatggtgtttatataacattttcctta 27744224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35137578 - 35137704
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| |||    
T  35137578 cacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaag 35137677  T
Q  101 ggtgtatgagaataaatggtgtctatg 127  Q
    |||||||||||| ||||||| ||||||    
T  35137678 ggtgtatgagaacaaatggtatctatg 35137704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 46033789 - 46033719
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||| |||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46033789 tcttctctattcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 46033719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 22343406 - 22343543
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||| ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||    
T  22343406 cacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 22343505  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| |||||||||||||||||||||    
T  22343506 ggtgtatgcaattaaaaggtgtctatgtaacattttcc 22343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 18207232 - 18207359
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtat 107  Q
    |||||||||| |||||||  || ||| | |||| |||| ||||||||||||||||| || |||||||||||||| ||| || | ||||| ||||||||||    
T  18207232 acaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctctttcatctcctcttctctcttcctagtggatagagtgtacaagggtgtat 18207330  T
Q  108 gagaataaatggtgtctatgtaacatttt 136  Q
    || |||||| ||| ||||| |||||||||    
T  18207331 gataataaagggtatctatctaacatttt 18207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3694412 - 3694519
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  |||||||||||||  |||| ||||||||||||||  | || |||||||||||||   ||||||||||||| |||    
T  3694412 cacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcccaatgcatggggtgtacaag 3694511  T
Q  101 ggtgtatg 108  Q
     |||||||    
T  3694512 agtgtatg 3694519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3784040 - 3784155
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  3784040 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 3784139  T
Q  101 ggtgtatgagaataaa 116  Q
      |||||| |||||||    
T  3784140 aatgtatgtgaataaa 3784155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8238258 - 8238397
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||  |||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  8238258 cacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 8238357  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||  | |||| || ||||||||||||||||||||    
T  8238358 ggtgtatgcaattaaaaggcgtctatgtaacattttcctt 8238397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 31735953 - 31736060
Alignment:
Q  32 tggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaac 131  Q
    ||||||||  |||| ||||||||||||||  | || ||||||||||||||  || |||||||||| ||||||||||| ||||||| ||| ||||| ||||    
T  31735953 tggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaac 31736052  T
Q  132 attttcct 139  Q
    ||||||||    
T  31736053 attttcct 31736060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41915786 - 41915921
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    ||||||||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  |  |||||||||| |||    
T  41915786 cacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatatatggggtgtacaag 41915885  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    ||||||||  | |||| |||||||||||||||||||    
T  41915886 ggtgtatgcaattaaaaggtgtctatgtaacatttt 41915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 46374807 - 46374741
Alignment:
Q  73 tctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    |||||||||  || |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  46374807 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcct 46374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 21234517 - 21234584
Alignment:
Q  72 ctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||||  || |||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  21234517 ctctcttcctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcct 21234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38267085 - 38267218
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||| ||||  |     
T  38267085 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacgaa 38267184  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||||| | |||||||| ||||    
T  38267185 ggtgtatggaaataaatgatatctatgtatcatt 38267218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 38044247 - 38044379
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| ||   ||| |||| |||  ||||  |||||||||||||| | |  |||| |||||||||  | ||||||||||| ||||||||    
T  38044247 acacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctctttcttcttctcttttctcttcctaatacatggggtgtacaagggtgt 38044346  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    |||  | |||| |||||||||||||||||||||    
T  38044347 atgcaattaaaaggtgtctatgtaacattttcc 38044379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3434607 - 3434730
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||| |||||||||  ||| |||||||||  |||| ||||||||||||||          |||||||||||  ||||||||||||| |||    
T  3434607 cacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctcttt----------tctctcttcctaatgcatggggtgtacaag 3434696  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| ||||||| |||||||||||| ||||    
T  3434697 gctgtatgggaataaagggtgtctatgtatcatt 3434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 11044270 - 11044356
Alignment:
Q  48 acactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||| | || ||||||||||||||  |||||| |||||| || ||||||||| ||||||  ||||||||||| ||||    
T  11044270 acactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcatt 11044356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 12310956 - 12311086
Alignment:
Q  8 acaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtat 107  Q
    |||||||||||||| ||| ||| ||||||||   |||| |||| ||| |||||| |||| |||||||||||||| ||  |   | |||| || |||||||    
T  12310956 acaaaaatctgacatgtggtcacgtggatcctgaacaagcacattttatctttcctttcctcttctctcttcctagtatacaagatgtacaaaggtgtat 12311055  T
Q  108 gagaataaatggtgtctatgtaacattttcc 138  Q
    |  |||||| |||||||||||||||||||||    
T  12311056 ggaaataaagggtgtctatgtaacattttcc 12311086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 7389434 - 7389566
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || |  |||||||||||  | |||||||||||  ||    
T  7389434 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctactctctcttcctaatacatggggtgta-cag 7389532  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| | |||||||||| ||||    
T  7389533 ggtgtatgggaataaaggatgtctatgtatcatt 7389566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36362071 - 36362192
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||||||||            |||||||||  | |||||| |||| |||    
T  36362071 cacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt------------tctcttcctaatacatgggatgtacaag 36362158  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  36362159 ggtgtatgagaataaagggtgtctatgtatcatt 36362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2318298 - 2318160
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctct-tc-ctggtgcatggggtgtata 98  Q
    |||| |||||||||||||||  ||| ||| ||||| || | | || || |||||||||||||| || |||||||||| || ||  ||||||| ||||| |    
T  2318298 cacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctctttcatctcatcttctctctctctctaatgcatggagtgtaca 2318199  T
Q  99 agggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    | ||||||||  ||||||  |||||||||||||||||||    
T  2318198 aaggtgtatggaaataaagtgtgtctatgtaacattttc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 7727960 - 7728086
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||| ||| |||| |||| |||  ||||  ||||||||| |||| | |  ||||||||||||||  |  |||||||||| |||| ||||||     
T  7727960 aaaaatctgacatgtggtcatatggaccccgcacaagtacactttctgtttcttcttctcttctctcttcctaatatatggggtgtacaaggatgtatgc 7728059  T
Q  110 gaataaatggtgtctatgtaacatttt 136  Q
     | |||| |||||||||||||||||||    
T  7728060 aattaaaaggtgtctatgtaacatttt 7728086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 1766799 - 1766702
Alignment:
Q  38 ccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattt 135  Q
    |||||||| ||||||||||||||| | || |||||||||||| | ||  ||| ||| || ||| || |||||||| |||  |||||||||||||||||    
T  1766799 ccatacaagcacactttctctttcctctcctcttctctcttcgtagtatatgaggtatacaagagtatatgagaacaaagtgtgtctatgtaacattt 1766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 138
Target Start/End: Original strand, 26296698 - 26296826
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||| |||||  ||| |||| |||  |||| | || |||||||||  | || |||||||||||| |  || ||| |||||| |||||||||||     
T  26296698 aaaaatctgatacgtggccatatggaccccgcacaagcgcattttctcttttctctcctcttctctcttcttaatgtatgaggtgtacaagggtgtatgg 26296797  T
Q  110 gaataaatggtgtctatgtaacattttcc 138  Q
     |||| |||||||||| ||||||||||||    
T  26296798 aaatatatggtgtctacgtaacattttcc 26296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36361968 - 36361847
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||| |||| ||||||||||||||            |||||||||  | |||||  |||| |||    
T  36361968 cacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt------------tctcttcctaatacatggaatgtacaag 36361881  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||||||||||| |||||||||||| ||||    
T  36361880 ggtgtatgagaataaagggtgtctatgtatcatt 36361847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 45223090 - 45223222
Alignment:
Q  4 ctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggt 103  Q
    ||||||||||||||||||||| ||||| |  | | ||||||| | || |||||||||||| || ||||||||||| |   |  |||||||||| || | |    
T  45223090 ctacacaaaaatctgacacgtaatcatattaacctcatacaagcgcattttctctttcatctcatcttctctctttcaaatatatggggtgtacaaagat 45223189  T
Q  104 gtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||||  |||||| | ||||||||| |||||||    
T  45223190 gtatgtaaataaaggatgtctatgtgacatttt 45223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32564481 - 32564342
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||   || |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | |||| |||||| |||    
T  32564481 cacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttctctttcttcttctcttctctcttcctaatacatgaggtgtacaag 32564382  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||  | ||||   |||||||||||||| ||||||    
T  32564381 ggtgtatgcaattaaaatatgtctatgtaacatcttcctt 32564342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 4e-31; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32813292 - 32813429
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||| |||  |||| |||  |||| ||||||||||||||  | || ||||||||||||||  || |||||||||| |||    
T  32813292 cacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaag 32813391  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||| |||||||||||||||||||||||||||||    
T  32813392 ggtgtatgggaataaatggtgtctatgtaacattttcc 32813429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 11152428 - 11152294
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  |||||| || |||  |||| ||| |||||| |||| | || |||||||||||||  |||||||||||||| |||| |||    
T  11152428 acacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctcctcttctctcttcccagtgcatggggtgtagaaggatgt 11152329  T
Q  106 atgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||||||||||||| |||||||||||||    
T  11152328 atgagaataaatggtgtctatataacattttcctt 11152294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 27564790 - 27564657
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||| |||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  27564790 cacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaag 27564691  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  27564690 ggtgtatgggaataaagggtgtctatgtatcatt 27564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 51898738 - 51898601
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||||||  |||| |||||||||| |||| | || |||||||||||||| |||||||||||||| |||    
T  51898738 cacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcctagtgcatggggtgtacaag 51898639  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||||   |||||| ||||| |||||||||||||||    
T  51898638 ggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 44454029 - 44454165
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggt----gtataagg 101  Q
    |||||||||||||||| ||| | | |||||||||| |||| |||||||| |||||| | || ||||||||||||||  ||||||||||    ||||||||    
T  44454029 acacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttcctctcatcttctctcttcctaatgcatggggtcagagtataagg 44454128  T
Q  102 gtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    |||||| |||||||||||||| |||||||||||||||    
T  44454129 gtgtataagaataaatggtgtttatgtaacattttcc 44454165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 50630508 - 50630629
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||| ||||||| ||||||||    
T  50630508 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatagggtgtacaagggtgt 50630607  T
Q  106 atgagaataaatggtgtctatg 127  Q
    ||||||||||||||||||||||    
T  50630608 atgagaataaatggtgtctatg 50630629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 41758855 - 41758983
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  |||  |||| |||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| ||||||||    
T  41758855 acacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgt 41758954  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||| |||||||||||| ||||    
T  41758955 atgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 48716332 - 48716204
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||| |||  |||| |||||||| |||||  |||| ||||||||||||||  ||||||||||||| ||||||||    
T  48716332 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcctaatgcatggggtgtacaagggtgt 48716233  T
Q  106 atgagaataaatggtgtctatgtaacatt 134  Q
    ||| ||||||| |||||||||||| ||||    
T  48716232 atgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 9474931 - 9474798
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||  |||||||| |||| |||    
T  9474931 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcctaatgcatgggatgtacaag 9474832  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||||||  ||||||||||| ||||    
T  9474831 ggtgtatgagaataaagagtgtctatgtatcatt 9474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 37649243 - 37649376
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||| ||| ||| || ||  |||| ||||||||| ||||  | || ||||||||||||||  ||||||||||||| |||    
T  37649243 cacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttttctctcctcttctctcttcctaatgcatggggtgtacaag 37649342  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| ||||||| |||||||||||| ||||    
T  37649343 ggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 3302588 - 3302450
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||||||||||||||||||| ||||| |||| ||||||||| |||||||||| |||||| || |||||||||||||   |  || ||||||| |||    
T  3302588 cacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctttttcatctcatcttctctcttccaaatatatagggtgtacaag 3302489  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcct 139  Q
    ||||||||  |||||| | ||| ||| ||||||||||||    
T  3302488 ggtgtatgttaataaaggatgtttatataacattttcct 3302450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5959055 - 5958913
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| |||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  5959055 cacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 5958956  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttccttata 143  Q
    ||||||||  | ||||  |||||||||||||||||||||||||    
T  5958955 ggtgtatgcaattaaaatgtgtctatgtaacattttccttata 5958913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 47452375 - 47452242
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| |||||||||  |||| ||||||||||||||  | || ||||||||||||||  ||||||||||||| |||    
T  47452375 cacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctattgcatggggtgtacaag 47452276  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    | |||||| |||||||  ||||||||||| ||||    
T  47452275 gatgtatgggaataaagagtgtctatgtatcatt 47452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 38632371 - 38632253
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||||||  ||| ||||| |||  |||| |||||||| |||||  | || ||||||||||||||  ||||||||||||| ||||||||    
T  38632371 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgt 38632272  T
Q  106 atgagaataaatggtgtct 124  Q
    ||| ||||||| |||||||    
T  38632271 atgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 37926493 - 37926356
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| ||||||||||||||||  ||  |||||||| |||||  |||||||||||||  | |  ||||||||||||||  || |||||||||| |||    
T  37926493 cacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctcttttctcttctcttctctcttcctaatgtatggggtgtacaag 37926394  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    | |||||| ||||||||||||||||| ||| |||||||    
T  37926393 gatgtatgtgaataaatggtgtctatataatattttcc 37926356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 45044548 - 45044476
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    ||||||||||||||  || |||||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  45044548 tcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttcctt 45044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 49811541 - 49811447
Alignment:
Q  42 acaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||| ||||||||||||||  | || ||||||||||||||  || ||| |||| | ||||||||||||||||||| |||||||||||||||||||    
T  49811541 acaagcacactttctcttttctctcctcttctctcttcctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatttt 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2581960 - 2582093
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| |||  |||| |||||||||| |||  | || ||||||||||||||  | |||| |||||| |||    
T  2581960 cacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttttctctcctcttctctcttcctaatacatgaggtgtacaag 2582059  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||| |||||||| ||||| |||||| ||||    
T  2582060 ggtgtattagaataaagggtgtttatgtatcatt 2582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3000364 - 3000497
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||  | || ||||||||||||||  |  |||||||||| |||    
T  3000364 cacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaag 3000463  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||  | |||||||||| ||||    
T  3000464 ggtgtatggaaataatggatgtctatgtatcatt 3000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 38595199 - 38595332
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||  | || ||||||||||||||  |  |||||||||| |||    
T  38595199 cacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcctaatatatggggtgtacaag 38595298  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||  |||||  | |||||||||| ||||    
T  38595299 ggtgtatggaaataatggatgtctatgtatcatt 38595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 50591055 - 50590918
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| |||  ||| |||| |||  ||||  |||||||||||||| | |  ||||||||||||||  | ||||||||||| |||    
T  50591055 cacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaag 50590956  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||  | |||| ||| |||||||||||||||||    
T  50590955 ggtgtatgcaattaaaaggtatctatgtaacattttcc 50590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 41608543 - 41608411
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    |||||||||||||||| |||  ||| |||| ||| |||||  |||||||||||||| | |  ||||||||||||||  | ||| ||||||| ||||||||    
T  41608543 acacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctctttcttcttctcttctctcttcctaatacatagggtgtacaagggtgt 41608444  T
Q  106 atgagaataaatggtgtctatgtaacattttcc 138  Q
    |||  | |||| ||||| |||||||||||||||    
T  41608443 atgcaattaaaaggtgtttatgtaacattttcc 41608411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 47748496 - 47748626
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||| |||  ||| ||||||||  ||||  | |||||||||||| | |  ||||||||||||||  | ||||||||||| ||| |||||||     
T  47748496 aaaaatctgacatgtggccatatggatcccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagagtgtatgc 47748595  T
Q  110 gaataaatggtgtctatgtaacattttcctt 140  Q
     | |||| |||||||||||||||||||||||    
T  47748596 aattaaaaggtgtctatgtaacattttcctt 47748626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 43177 - 43310
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  ||| |||||  ||  |||| ||||||||||||||  | || || |||||||| ||  ||||||||||||| |||    
T  43177 cacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttctctcctcctctctctttctaatgcatggggtgtacaag 43276  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
     |||||| |||||||| ||| |||||||| ||||    
T  43277 agtgtataagaataaagggtatctatgtatcatt 43310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8346443 - 8346309
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttct-ctcttcctggtgcatggggtgtataa 99  Q
    |||| |||||||||||||||||||  ||| ||||| ||   |||| ||||||||||||||  | || |||| | ||||||||  ||||||| ||||| ||    
T  8346443 cacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttttctctcctctttttctcttcctaatgcatggagtgtacaa 8346344  T
Q  100 gggtgtatgagaataaatggtgtctatgtaacatt 134  Q
     |||||||||||||||||||| | |||||| ||||    
T  8346343 aggtgtatgagaataaatggtatttatgtatcatt 8346309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6260915 - 6261052
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| ||| |||||||| ||| ||| ||| ||||| |||  | || |||| ||||| |||| | || ||||||||||| || ||  || ||||||| ||     
T  6260915 cacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctatttcttctcctcttctctctttctagtatatagggtgtacaaa 6261014  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  6261015 ggtgtatgaaaataaatggtgtgtatgtaacattttcc 6261052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 7740778 - 7740915
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||||||| |||||| |||||||||   ||||||| |||| ||||  | | ||||| |||||| || ||||||||||||||| |||||||| |||| ||     
T  7740778 cacctacataaaaatatgacacgtggctatgtggaccccacacaaatatattttctttttcatctcctcttctctcttcctgttgcatgggatgtacaaa 7740877  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttcc 138  Q
    | |||| ||||||||| ||| || |||| |||| ||||    
T  7740878 gatgtacgagaataaagggtatccatgtgacatcttcc 7740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13414806 - 13414910
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||| ||||||  ||| ||||| |||| |||| |||| |||||||||  | || ||||||||||||||  ||||||| |||||  ||    
T  13414806 cacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttctatcatcttctctcttcctaatgcatggagtgtactag 13414905  T
Q  101 ggtgt 105  Q
    |||||    
T  13414906 ggtgt 13414910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 34340035 - 34339968
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatttt 136  Q
    |||||||||||||  |||||| ||||||| ||| |||| ||| |||||| |||||||||||||||||||    
T  34340035 tcttctctcttccaagtgcatagggtgtacaagagtgt-tgaaaataaaaggtgtctatgtaacatttt 34339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 44548426 - 44548351
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcct 81  Q
    |||||||||||||||||||  ||| ||||| |||  |||| ||||||||||||||  | || ||||||||||||||    
T  44548426 acacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcttcttctctcttcct 44548351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 26274541 - 26274607
Alignment:
Q  68 tcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    ||||||||||||||  |||||| | || | ||||||||||| ||||||| |||||||||||| ||||    
T  26274541 tcttctctcttcctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcatt 26274607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 979 - 848
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    ||||||||| |||||||||  ||| ||| |||||  |||| ||||||||||||||| | || |||||||||||||| |||||||||||||| ||| ||||    
T  979 acacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgt 880  T
Q  106 atgagaataaatggtgtctatgtaacattttc 137  Q
    ||| ||||||| ||||| ||||||||||||||    
T  879 atgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 979 - 848
Alignment:
Q  6 acacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgt 105  Q
    ||||||||| |||||||||  ||| ||| |||||  |||| ||||||||||||||| | || |||||||||||||| |||||||||||||| ||| ||||    
T  979 acacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgt 880  T
Q  106 atgagaataaatggtgtctatgtaacattttc 137  Q
    ||| ||||||| ||||| ||||||||||||||    
T  879 atgggaataaagggtgtttatgtaacattttc 848  T

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Target: scaffold0237 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4074 - 4207
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||||||  | | |||||||||  | || ||||||||||||||  | |  ||||||||||||||  ||||||||||||| |||    
T  4074 cacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttcctaatgcatggggtgtacaag 4173  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacatt 134  Q
    |||||||| |||||||||||||||||||| ||||    
T  4174 ggtgtatgggaataaatggtgtctatgtatcatt 4207  T

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Target: scaffold0110 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 8915 - 8779
Alignment:
Q  4 ctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggt 103  Q
    |||||||||||| |||||| |  ||| ||||| |||| ||||  ||| |||||||||| |  | ||||||||||||||  |  |||||||||| ||||||    
T  8915 ctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttctctttcctcccatcttctctcttcctaatatatggggtgtacaagggt 8816  T
Q  104 gtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||| |||||||| |||||||||||||||||||||||    
T  8815 gtataagaataaaaggtgtctatgtaacattttcctt 8779  T

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Target: scaffold0018 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 152543 - 152679
Alignment:
Q  1 cacctacacaaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataag 100  Q
    |||| |||||||||||||||| ||| |||| ||||||||  ||||  |||||||||||||| | |  ||||||||||| ||  | |||||| |||| |||    
T  152543 cacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctcttctctctttctaatacatgggatgtacaag 152642  T
Q  101 ggtgtatgagaataaatggtgtctatgtaacattttc 137  Q
    ||||||||  | |||| ||||||||||||||||||||    
T  152643 ggtgtatgcaattaaaaggtgtctatgtaacattttc 152679  T

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Target: scaffold0321 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 10155 - 10031
Alignment:
Q  10 aaaaatctgacacgtgatcatgtggatcccatacaatcacactttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatga 109  Q
    |||||||||||||||  ||| ||||| | | ||||| ||||||||||||||  | || ||||||||||||||  ||||| ||||||| |||||||||||     
T  10155 aaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctcttttctctcctcttctctcttcctaatgcatagggtgtacaagggtgtatgg 10056  T
Q  110 gaataaatggtgtctatgtaacatt 134  Q
     |||||  |||||||||||| ||||    
T  10055 aaataatgggtgtctatgtatcatt 10031  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 17199 - 17287
Alignment:
Q  52 tttctctttcatttcgtcttctctcttcctggtgcatggggtgtataagggtgtatgagaataaatggtgtctatgtaacattttcctt 140  Q
    |||||||||| | || |||||||||||||| |   ||  |||||| || ||||||||  |||||| |||||||||||||||||||||||    
T  17199 tttctctttcctctcctcttctctcttcctagaatataaggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcctt 17287  T

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