View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_high_34 (Length: 403)
Name: NF7550_high_34
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 41 - 389
Target Start/End: Complemental strand, 28757300 - 28756951
Alignment:
| Q |
41 |
gctataagctataaggttttcagttttctattttaagaggagtattagaactctaatcactgacaaaccagtgtacatttgaagatattta-tcttattt |
139 |
Q |
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| T |
28757300 |
gctataagctataagcttttcagttttctattttaagaggagtattagaattctaatcactgacaaaccagtgtacatttgaagatatttaatcttattt |
28757201 |
T |
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| Q |
140 |
atattgattaatgttgcaatatgtagttggcatgaaagagtggattatctacatttggagatatatatttacctttcatcttttcctggtttttgtactt |
239 |
Q |
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| T |
28757200 |
atattgattaatgttgcaatatgtagttggcatgaaagagtggattatctacatttggagatatatatttacctttcatcttttcctggtttttgtactt |
28757101 |
T |
|
| Q |
240 |
gtggaataatctttttgaaaaactgtgtgctatatggtataatggaccacattaaaggctaaagctgtagtgaaactagttatgattgttcacaagcata |
339 |
Q |
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| T |
28757100 |
gtggaataatctttttgaaaaactgtgtgctatatggtataatggaccacattaaaggctaaagctgtagtgaaactagttatgattgttcacaagcata |
28757001 |
T |
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| Q |
340 |
tgttggtggaactttgcaggctgatagggatttgtaactgaaggttcatc |
389 |
Q |
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| T |
28757000 |
tgttggtggaactttgcaggctgatagggatttgtaactgaaggttcatc |
28756951 |
T |
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