View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_high_50 (Length: 313)
Name: NF7550_high_50
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 296
Target Start/End: Original strand, 39735137 - 39735422
Alignment:
| Q |
11 |
acaatatacccttgtacatgccccacaagtcacagcataatttgttctattgttcaacattttgtttaaattagtaattaaatcacatcatccatccatg |
110 |
Q |
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| T |
39735137 |
acaatatacccttgtacatgccccacaagtcacagcataatttgttctattgttcaacattttgtttaaattagtaattaaatcacatcatccatccatg |
39735236 |
T |
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| Q |
111 |
cattttcaaacacttactatattaataagactcaatgcatgtttgaatgattttgataaaatcacagtgatattaggaattttgttcaagttagtgtagc |
210 |
Q |
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| T |
39735237 |
cattttcaaacacttactatattaataagactcaatgcatgtttgaatgattttggtaaaattacagtgatattagtaattttgttgaagttagtgtagc |
39735336 |
T |
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| Q |
211 |
tttcatcaaaatctttagtaaattcaacaatggttgtacattttgattctattaaattcacttgcaattcaaacatgcacaaaaac |
296 |
Q |
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| T |
39735337 |
tttcatcaaaatctttagtaaattcaacaatggttgtacattttgattctattaaattcacttacaattcaaacatgcacaaaaac |
39735422 |
T |
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