View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_high_68 (Length: 253)
Name: NF7550_high_68
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_high_68 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 2409947 - 2409726
Alignment:
| Q |
13 |
aatatcaagaatcctgatgtgattggactaaaaatcttgtgtagtagagcctttaaagtgacacaatttttccctgttgttatttttcagttcgaatttg |
112 |
Q |
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| T |
2409947 |
aatatcaagaatcctgatgtgattggactaaaaatcttgtgtagtagagcctttaaagtgacacaatttttcgctgttgttatttttcagttcgaatttg |
2409848 |
T |
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| Q |
113 |
aagtgcccgaatactgctcctgcaaagccaaggatgtcaagaatggatttcatttcctcattgtcacacaaggtgactgagaataaggtgaaagttgtca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
2409847 |
aagtgcccgaatactgctcctgcaaagccaaggatgtcaagaatggatttcatttcctcattgtcacacaaggtgactgagaataaagtgaaagttgtca |
2409748 |
T |
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| Q |
213 |
aacctctttctaaggttgctgc |
234 |
Q |
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|||||||||||||||||||||| |
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| T |
2409747 |
aacctctttctaaggttgctgc |
2409726 |
T |
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