View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_high_80 (Length: 242)
Name: NF7550_high_80
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_high_80 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 2410348 - 2410581
Alignment:
| Q |
1 |
ctacctcgcttctctttctcttcgattcaatgcttttctaagccgaacattggggcttctagctgccataacctgaaaatccaacacaaatttgagaaat |
100 |
Q |
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| T |
2410348 |
ctacctcgcttctctttctcttcgattcaatgcttttctaagccgaacattggggcttctagctgccataacctgaaaatccaacacaaatttgagaaat |
2410447 |
T |
|
| Q |
101 |
actcgttacacattactcattactaattaatcgttcttatgaccaaaaccaaaatcaataaaacaagtcaggtctagaagatacccgaagaacaaaattc |
200 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
2410448 |
actcgttacacattactcattactaattaattgttcttatgaccaaaaccaaaatcaataaagcaagtcaggtctagaagatacccgaagaacaaaattc |
2410547 |
T |
|
| Q |
201 |
ttgtaaattgcttcagaatcaaactcttcttcat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
2410548 |
ttgtaaattgcttcagaatcaaactcttcttcat |
2410581 |
T |
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