View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_high_82 (Length: 239)
Name: NF7550_high_82
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_high_82 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 25913735 - 25913512
Alignment:
| Q |
1 |
ccacatacccccatccacccaaaccaatgtattacataaataattgtttcacccattgtatttttactgcacctaacttcgtctaaagtacaatcataac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25913735 |
ccacatacccccatccacccaaaccaatgtattacataaataattgtttcacccattgtatttttactgcacctaacttcgtctaaagtaccatcataac |
25913636 |
T |
|
| Q |
101 |
tttaaagaactattacttgaaggttgaaagcaaatatttcctgttgcacatatctctttaaggtttaattccataatttacatgctaaaagtttttcttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25913635 |
tttaaagaactattacttgaaggttgaaagcaaatatttcttgttgcacatatctctttaaggtttaattccataatttacatgctaaaagtttttcttg |
25913536 |
T |
|
| Q |
201 |
catctcatagactttacatgctat |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
25913535 |
catctcatagactttacatgctat |
25913512 |
T |
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