View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7550_low_36 (Length: 427)

Name: NF7550_low_36
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7550_low_36
NF7550_low_36
[»] chr1 (33 HSPs)
chr1 (13-350)||(45202491-45202839)
chr1 (367-412)||(6653250-6653295)
chr1 (367-412)||(11173513-11173558)
chr1 (367-412)||(13240232-13240277)
chr1 (367-412)||(14247458-14247503)
chr1 (367-412)||(24317207-24317252)
chr1 (367-412)||(33010799-33010844)
chr1 (367-412)||(39569468-39569513)
chr1 (367-412)||(39982289-39982334)
chr1 (367-412)||(51290575-51290620)
chr1 (367-412)||(2482645-2482690)
chr1 (367-412)||(13942169-13942214)
chr1 (367-412)||(15932812-15932857)
chr1 (367-412)||(20581525-20581570)
chr1 (367-412)||(28852932-28852977)
chr1 (367-412)||(34270786-34270831)
chr1 (367-412)||(40400059-40400104)
chr1 (367-412)||(40536801-40536846)
chr1 (367-412)||(42948215-42948260)
chr1 (367-412)||(44721897-44721942)
chr1 (367-412)||(49823230-49823275)
chr1 (367-412)||(50727823-50727868)
chr1 (367-412)||(52024751-52024796)
chr1 (367-412)||(52044402-52044447)
chr1 (367-412)||(2138258-2138303)
chr1 (367-412)||(26151178-26151223)
chr1 (371-412)||(40498647-40498688)
chr1 (367-412)||(18909241-18909286)
chr1 (371-412)||(29922238-29922279)
chr1 (371-412)||(7009038-7009079)
chr1 (371-412)||(23444357-23444398)
chr1 (367-412)||(48933241-48933286)
chr1 (371-412)||(51776059-51776100)
[»] scaffold0438 (1 HSPs)
scaffold0438 (367-412)||(2128-2173)
[»] scaffold0391 (1 HSPs)
scaffold0391 (367-412)||(3901-3946)
[»] scaffold0276 (2 HSPs)
scaffold0276 (367-412)||(12546-12591)
scaffold0276 (367-412)||(14062-14107)
[»] chr8 (32 HSPs)
chr8 (367-412)||(3137237-3137282)
chr8 (367-412)||(8376266-8376311)
chr8 (367-412)||(11587924-11587969)
chr8 (367-412)||(15839481-15839526)
chr8 (367-412)||(17601360-17601405)
chr8 (367-412)||(24822736-24822781)
chr8 (367-412)||(26290791-26290836)
chr8 (367-412)||(26304048-26304093)
chr8 (367-412)||(26337403-26337448)
chr8 (367-412)||(28885724-28885769)
chr8 (367-412)||(28909688-28909733)
chr8 (367-412)||(39365272-39365317)
chr8 (367-408)||(3032914-3032955)
chr8 (367-412)||(5988214-5988259)
chr8 (367-412)||(8013937-8013982)
chr8 (367-412)||(17122116-17122161)
chr8 (367-412)||(23357269-23357314)
chr8 (367-412)||(26122538-26122583)
chr8 (367-412)||(34917564-34917609)
chr8 (367-412)||(35605363-35605408)
chr8 (367-412)||(37578009-37578054)
chr8 (367-412)||(42512185-42512230)
chr8 (367-412)||(43664337-43664382)
chr8 (367-412)||(5599873-5599918)
chr8 (367-412)||(5640702-5640747)
chr8 (367-412)||(22439618-22439663)
chr8 (367-412)||(34565041-34565086)
chr8 (367-412)||(8656580-8656625)
chr8 (367-412)||(12713589-12713634)
chr8 (371-412)||(12722586-12722627)
chr8 (371-412)||(31793862-31793903)
chr8 (371-412)||(42687954-42687995)
[»] chr7 (29 HSPs)
chr7 (367-412)||(7790929-7790974)
chr7 (367-412)||(7900459-7900504)
chr7 (367-412)||(26015875-26015920)
chr7 (367-412)||(32542192-32542237)
chr7 (367-412)||(35924256-35924301)
chr7 (367-412)||(38876063-38876108)
chr7 (367-412)||(42095783-42095828)
chr7 (367-412)||(43246966-43247011)
chr7 (367-412)||(46322055-46322100)
chr7 (367-412)||(46923904-46923949)
chr7 (367-412)||(47065949-47065994)
chr7 (367-412)||(47779518-47779563)
chr7 (367-412)||(8203450-8203495)
chr7 (367-412)||(8215927-8215972)
chr7 (367-412)||(21279078-21279123)
chr7 (367-412)||(32662377-32662422)
chr7 (367-412)||(38283600-38283645)
chr7 (367-412)||(39074365-39074410)
chr7 (367-412)||(40705521-40705566)
chr7 (367-412)||(40995213-40995258)
chr7 (367-412)||(43047095-43047140)
chr7 (367-412)||(25876802-25876847)
chr7 (367-412)||(34591702-34591747)
chr7 (371-412)||(20492714-20492755)
chr7 (367-412)||(21874640-21874685)
chr7 (375-412)||(42436517-42436554)
chr7 (370-412)||(27324984-27325026)
chr7 (371-412)||(39597882-39597923)
chr7 (371-412)||(43775913-43775954)
[»] chr6 (12 HSPs)
chr6 (367-412)||(29122367-29122412)
chr6 (367-412)||(29630509-29630554)
chr6 (367-412)||(3094614-3094659)
chr6 (367-412)||(13889971-13890016)
chr6 (367-412)||(6167949-6167994)
chr6 (367-412)||(6625384-6625429)
chr6 (367-412)||(18893701-18893746)
chr6 (367-412)||(25335151-25335196)
chr6 (367-412)||(7141289-7141334)
chr6 (371-412)||(31091158-31091199)
chr6 (374-412)||(6925810-6925848)
chr6 (371-412)||(34085857-34085898)
[»] chr5 (27 HSPs)
chr5 (367-412)||(4156183-4156228)
chr5 (367-412)||(6469948-6469993)
chr5 (367-412)||(9065724-9065769)
chr5 (367-412)||(13145895-13145940)
chr5 (367-412)||(25084882-25084927)
chr5 (367-412)||(25142855-25142900)
chr5 (367-412)||(38760537-38760582)
chr5 (368-412)||(24559095-24559139)
chr5 (368-412)||(24600127-24600171)
chr5 (367-412)||(31527592-31527637)
chr5 (367-412)||(33280835-33280880)
chr5 (367-412)||(43518306-43518351)
chr5 (371-412)||(8232573-8232614)
chr5 (367-412)||(19034735-19034780)
chr5 (367-412)||(19617737-19617782)
chr5 (367-412)||(29920316-29920361)
chr5 (367-412)||(43293672-43293717)
chr5 (371-412)||(7338650-7338691)
chr5 (371-412)||(10666151-10666192)
chr5 (371-412)||(18864460-18864501)
chr5 (371-412)||(31484679-31484720)
chr5 (367-412)||(36294207-36294252)
chr5 (367-412)||(37865901-37865946)
chr5 (371-412)||(40738922-40738963)
chr5 (374-412)||(37274629-37274667)
chr5 (371-412)||(4621176-4621217)
chr5 (371-412)||(41881934-41881975)
[»] chr4 (34 HSPs)
chr4 (367-412)||(613849-613894)
chr4 (367-412)||(20434188-20434233)
chr4 (367-412)||(20737716-20737761)
chr4 (367-412)||(39540428-39540473)
chr4 (367-412)||(42724208-42724253)
chr4 (367-412)||(52913220-52913265)
chr4 (367-412)||(53036042-53036087)
chr4 (367-412)||(53875137-53875182)
chr4 (367-412)||(55219893-55219938)
chr4 (367-412)||(56018720-56018765)
chr4 (367-412)||(56362844-56362889)
chr4 (367-412)||(10542059-10542104)
chr4 (367-412)||(19874149-19874194)
chr4 (367-412)||(25857566-25857611)
chr4 (367-412)||(28406465-28406510)
chr4 (367-412)||(55215620-55215665)
chr4 (370-412)||(37234232-37234274)
chr4 (367-412)||(23895222-23895267)
chr4 (367-412)||(42348686-42348731)
chr4 (367-412)||(43458418-43458463)
chr4 (367-412)||(43830244-43830289)
chr4 (367-412)||(52839759-52839804)
chr4 (367-412)||(55183554-55183599)
chr4 (371-412)||(22301771-22301812)
chr4 (371-412)||(35339671-35339712)
chr4 (367-412)||(38291882-38291927)
chr4 (367-412)||(47467434-47467479)
chr4 (377-412)||(8713260-8713295)
chr4 (371-412)||(49352-49393)
chr4 (371-412)||(24034548-24034589)
chr4 (371-412)||(24897015-24897056)
chr4 (367-412)||(31709741-31709786)
chr4 (371-412)||(40430152-40430193)
chr4 (367-412)||(52307484-52307529)
[»] chr3 (31 HSPs)
chr3 (367-412)||(84414-84459)
chr3 (367-412)||(10841458-10841503)
chr3 (367-412)||(10999772-10999817)
chr3 (367-412)||(20048360-20048405)
chr3 (367-412)||(20835608-20835653)
chr3 (367-412)||(24395121-24395166)
chr3 (367-412)||(25710912-25710957)
chr3 (367-412)||(32236158-32236203)
chr3 (367-412)||(38871146-38871191)
chr3 (367-412)||(40586197-40586242)
chr3 (367-412)||(4044834-4044879)
chr3 (367-412)||(4516040-4516085)
chr3 (367-412)||(7679723-7679768)
chr3 (367-412)||(20657413-20657458)
chr3 (367-412)||(22781933-22781978)
chr3 (367-412)||(26090227-26090272)
chr3 (367-412)||(33712649-33712694)
chr3 (367-412)||(33966921-33966966)
chr3 (367-412)||(37971700-37971745)
chr3 (367-412)||(53974336-53974381)
chr3 (367-412)||(672093-672138)
chr3 (367-412)||(7156697-7156742)
chr3 (367-412)||(36430293-36430338)
chr3 (374-412)||(6268384-6268422)
chr3 (371-412)||(35039602-35039643)
chr3 (371-412)||(36232697-36232738)
chr3 (371-412)||(36885766-36885807)
chr3 (371-412)||(38145266-38145307)
chr3 (367-412)||(41069862-41069906)
chr3 (371-412)||(7681029-7681070)
chr3 (371-412)||(11123888-11123929)
[»] chr2 (23 HSPs)
chr2 (367-412)||(927090-927135)
chr2 (367-412)||(1481837-1481882)
chr2 (367-412)||(13196151-13196196)
chr2 (367-412)||(15011845-15011890)
chr2 (367-412)||(25853446-25853491)
chr2 (367-412)||(32551681-32551726)
chr2 (367-412)||(44143386-44143431)
chr2 (367-412)||(45505799-45505844)
chr2 (367-412)||(1520202-1520247)
chr2 (367-412)||(10638804-10638849)
chr2 (367-412)||(35895518-35895563)
chr2 (367-412)||(39697791-39697836)
chr2 (367-412)||(43577029-43577074)
chr2 (367-412)||(2390700-2390745)
chr2 (367-412)||(3178252-3178297)
chr2 (367-412)||(21657953-21657998)
chr2 (367-412)||(27980925-27980970)
chr2 (367-412)||(28067455-28067500)
chr2 (367-412)||(34202305-34202350)
chr2 (367-412)||(40811786-40811831)
chr2 (367-412)||(42342994-42343039)
chr2 (371-412)||(4331895-4331936)
chr2 (371-412)||(26171006-26171047)
[»] scaffold0368 (1 HSPs)
scaffold0368 (367-412)||(13888-13933)
[»] scaffold0065 (1 HSPs)
scaffold0065 (367-412)||(38425-38470)
[»] scaffold0248 (1 HSPs)
scaffold0248 (367-412)||(3037-3082)
[»] scaffold0007 (1 HSPs)
scaffold0007 (367-412)||(157128-157173)


Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 13 - 350
Target Start/End: Complemental strand, 45202839 - 45202491
Alignment:
Q  13 aatatgactgtcacaaatgaaatgcaactatagaatgactcattgtcacatttatctatctattctaagaaaaatctttgataatgacatatggtagaat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45202839 aatatgactgtcacaaatgaaatgcaactatagaatgactcattgtcacatttatctatctattctaagaaaaatctttgataatgacatatggtagaat 45202740  T
Q  113 tttatacctctattttctgtcatattttcccctctgcatgggatccttactagttttctttaatgagactgagccctacatttatacacataagttttga 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45202739 tttatacctctattttctgtcatattttcccctctgcatgggatccttactagttttctttaatgagactgagccttacatttatacacataagttttga 45202640  T
Q  213 gcttatagtgaatggttggggttcattttttgtgaaaggtataagtgattttaaacaattaaaatttattttggttatttgttgggtgttt--------- 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  45202639 gcttatagtgaatggttggggttcattttttgtgaaaggtataagtgattttaaacaattaaaatttattttggttatttgttgggtgtttgagagttgt 45202540  T
Q  304 --gagaattttgggctaaaattagttttacctccaaaatattattctaa 350  Q
      |||| |||||||||||||||| |||||||||||||||||||||||||    
T  45202539 ttgagagttttgggctaaaattatttttacctccaaaatattattctaa 45202491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 6653250 - 6653295
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6653250 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 6653295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 11173558 - 11173513
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11173558 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 11173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 13240277 - 13240232
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13240277 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 13240232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 14247503 - 14247458
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14247503 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 14247458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 24317207 - 24317252
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24317207 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 24317252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 33010844 - 33010799
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33010844 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 33010799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 39569513 - 39569468
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39569513 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 39569468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 39982289 - 39982334
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39982289 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 39982334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 51290575 - 51290620
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  51290575 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 51290620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 2482690 - 2482645
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  2482690 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 2482645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 13942169 - 13942214
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13942169 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 13942214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 15932812 - 15932857
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15932812 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 15932857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 20581525 - 20581570
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  20581525 atcatggttgcaccccaaaatgacaaaattaccctttcataaaatt 20581570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 28852977 - 28852932
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  28852977 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 28852932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 34270831 - 34270786
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  34270831 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 34270786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 40400059 - 40400104
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  40400059 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 40400104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 40536846 - 40536801
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  40536846 atcatggttgcacctcaaaatgacaagattaccctttcataaaatt 40536801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 42948215 - 42948260
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  42948215 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 42948260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 44721897 - 44721942
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  44721897 atcatggttgcaccccaaaatgataagattaccctttcataaaatt 44721942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 49823230 - 49823275
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  49823230 atcatggttgcaccccaaaatgacaagattacccttttataaaatt 49823275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 50727823 - 50727868
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  50727823 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 50727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 52024751 - 52024796
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  52024751 atcatggttgcaccccaaaatgacaggattaccctttcataaaatt 52024796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 52044447 - 52044402
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  52044447 atcatggttgcaccccaaaatgataagattaccctttcataaaatt 52044402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 2138303 - 2138258
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||    
T  2138303 atcatggttgcacctcaaaatgataagattaccctttcataaaatt 2138258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26151223 - 26151178
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  26151223 atcatggttgcaccccaaaatgataagattatcctttcataaaatt 26151178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 40498647 - 40498688
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  40498647 tggttgcaccccaaaatgacaaaattaccctttcataaaatt 40498688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 18909241 - 18909286
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  18909241 atcatggttgcattccaaaatgacaatattaccctttcataaaatt 18909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 29922279 - 29922238
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  29922279 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 29922238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 7009038 - 7009079
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  7009038 tggttacaccccaaaataacaaaattaccctttcataaaatt 7009079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 23444398 - 23444357
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| |||||||| |||| ||||||||||||||    
T  23444398 tggttgcaccccacaatgacaaaattatcctttcataaaatt 23444357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 48933241 - 48933286
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||    
T  48933241 atcatggttgcacctcaaaatgataaaattacccttccataaaatt 48933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 51776059 - 51776100
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||| ||||||||||||| ||||||||| |||||||||    
T  51776059 tggttgcatcccaaaatgacaaaattacccttccataaaatt 51776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 2173 - 2128
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2173 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 3901 - 3946
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3901 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 3946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 12546 - 12591
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12546 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 12591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 14107 - 14062
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||    
T  14107 atcatggttgcaccccaaaattataagattatcctttcataaaatt 14062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 3137282 - 3137237
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3137282 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 3137237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 8376266 - 8376311
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8376266 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 8376311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 11587924 - 11587969
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11587924 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 11587969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 15839481 - 15839526
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15839481 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 15839526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 17601360 - 17601405
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  17601360 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 17601405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 24822781 - 24822736
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24822781 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 24822736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26290836 - 26290791
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26290836 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 26290791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26304093 - 26304048
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26304093 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 26304048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26337448 - 26337403
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26337448 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 26337403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 28885769 - 28885724
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28885769 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 28885724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 28909688 - 28909733
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28909688 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 28909733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 39365272 - 39365317
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39365272 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 39365317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 408
Target Start/End: Complemental strand, 3032955 - 3032914
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3032955 atcatggttgcaccccaaaatgacaagattaccctttcataa 3032914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 5988214 - 5988259
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  5988214 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 5988259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 8013982 - 8013937
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8013982 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 8013937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 17122116 - 17122161
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17122116 atcatggttgcaccccaaaataacaagattaccctttcataaaatt 17122161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 23357314 - 23357269
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23357314 atcatggttgcaccccaaaatgacaagattaccttttcataaaatt 23357269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26122583 - 26122538
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26122583 atcatggttgcaccccaaaatgataagattaccctttcataaaatt 26122538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 34917564 - 34917609
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  34917564 atcatggatgcaccccaaaatgacaagattaccctttcataaaatt 34917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 35605363 - 35605408
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  35605363 atcatggttgcacctcaaaatgacaagattaccctttcataaaatt 35605408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 37578009 - 37578054
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  37578009 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 37578054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 42512185 - 42512230
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  42512185 atcatggttgcatcccaaaatgacaagattaccctttcataaaatt 42512230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43664382 - 43664337
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  43664382 atcatggttgcacctcaaaatgacaagattaccctttcataaaatt 43664337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 5599918 - 5599873
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  5599918 atcatggttgcattccaaaatgacaagattaccctttcataaaatt 5599873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 5640702 - 5640747
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  5640702 atcatggttgcattccaaaatgacaagattaccctttcataaaatt 5640747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 22439663 - 22439618
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  22439663 atcatggttacacctcaaaatgacaagattaccctttcataaaatt 22439618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 34565086 - 34565041
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  34565086 atcatggttgcaccccaaaatgacaagattatccttttataaaatt 34565041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 8656580 - 8656625
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||    
T  8656580 atcatggttgcaaccaaaaatgacaagattaacctttcataaaatt 8656625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 12713634 - 12713589
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||    
T  12713634 atcatggttgcaccccaaaatgacaatattacctttttataaaatt 12713589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 12722586 - 12722627
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  12722586 tggttgcaccccaaaatgacaaaattacccttccataaaatt 12722627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 31793903 - 31793862
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  31793903 tggttgcaccccaaaatgacaaaattacccttccataaaatt 31793862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 42687995 - 42687954
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  42687995 tggttgcaccccaaaatgacaaaattacccttccataaaatt 42687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 7790929 - 7790974
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7790929 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 7790974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 7900459 - 7900504
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7900459 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 7900504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 26015920 - 26015875
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26015920 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 26015875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 32542237 - 32542192
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32542237 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32542192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 35924256 - 35924301
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35924256 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 35924301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 38876108 - 38876063
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38876108 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38876063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 42095828 - 42095783
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42095828 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 42095783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43247011 - 43246966
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43247011 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 43246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 46322100 - 46322055
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46322100 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 46322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 46923904 - 46923949
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  46923904 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 46923949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 47065994 - 47065949
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47065994 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 47065949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 47779563 - 47779518
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47779563 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 47779518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 8203495 - 8203450
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8203495 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 8203450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 8215972 - 8215927
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8215972 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 8215927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 21279123 - 21279078
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  21279123 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 21279078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 32662422 - 32662377
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  32662422 atcatggttgcaccccaaaatgacaagattaccttttcataaaatt 32662377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 38283645 - 38283600
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  38283645 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 38283600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 39074410 - 39074365
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  39074410 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 39074365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 40705566 - 40705521
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  40705566 atcatggttgcaccccaaaatgacaagattgccctttcataaaatt 40705521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 40995213 - 40995258
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  40995213 atcatggttgcaccccaaaatgataagattaccctttcataaaatt 40995258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43047140 - 43047095
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  43047140 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 43047095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 25876802 - 25876847
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  25876802 atcatggttgcaccccaaaatgacaatattacccttttataaaatt 25876847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 34591702 - 34591747
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  34591702 atcatggttgcacctcaaaatgacaagattatcctttcataaaatt 34591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 20492714 - 20492755
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  20492714 tggttgcaccccaaaatgacaaaattacccttccataaaatt 20492755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 21874685 - 21874640
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||    
T  21874685 atcatggttgcaccctaaaatgacaagattattctttcataaaatt 21874640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 412
Target Start/End: Complemental strand, 42436554 - 42436517
Alignment:
Q  375 tgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||    
T  42436554 tgcaccccaaaatgacaagattacccttccataaaatt 42436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 412
Target Start/End: Original strand, 27324984 - 27325026
Alignment:
Q  370 atggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||    
T  27324984 atggttgcactccaaaatgataagattatcctttcataaaatt 27325026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 39597923 - 39597882
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| |||| ||| ||||||||||    
T  39597923 tggttgcaccccaaaatgacaaaattatcctgtcataaaatt 39597882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 43775913 - 43775954
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||| || |||| ||||||||||||||    
T  43775913 tggttgcaccccaaaatgataaaattatcctttcataaaatt 43775954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 29122412 - 29122367
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29122412 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 29122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 29630554 - 29630509
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29630554 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 29630509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 3094614 - 3094659
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  3094614 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 3094659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 13890016 - 13889971
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13890016 atcatggttgcaccccaaaataacaagattaccctttcataaaatt 13889971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 6167994 - 6167949
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  6167994 atcatggttgcaccctaaaatgacaagattaacctttcataaaatt 6167949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 6625384 - 6625429
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  6625384 atcatggttgcaccctaaaatgacaagattatcctttcataaaatt 6625429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 18893701 - 18893746
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18893701 atcatggttacaccccaaaatgacaagattatcctttcataaaatt 18893746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 25335196 - 25335151
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  25335196 atcatggttgcacctcaaaatgacaagattatcctttcataaaatt 25335151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 7141289 - 7141334
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  7141289 atcatagttgcaccccaaaataacaagattatcctttcataaaatt 7141334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 31091199 - 31091158
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  31091199 tggttgcaccccaaaatgacaaaattacccttccataaaatt 31091158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 412
Target Start/End: Original strand, 6925810 - 6925848
Alignment:
Q  374 ttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  6925810 ttgcaccccaaaatgacaaaattacccttccataaaatt 6925848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 34085898 - 34085857
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| |||| |||| |||||||||    
T  34085898 tggttgcaccccaaaatgacaaaattatccttccataaaatt 34085857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 4156228 - 4156183
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4156228 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 4156183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 6469993 - 6469948
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6469993 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 6469948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 9065724 - 9065769
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9065724 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 9065769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 13145940 - 13145895
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13145940 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 13145895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 25084882 - 25084927
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25084882 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 25084927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 25142855 - 25142900
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25142855 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 25142900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 38760582 - 38760537
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38760582 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 24559095 - 24559139
Alignment:
Q  368 tcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24559095 tcatggttgcaccccaaaatgacaagattaccctttcataaaatt 24559139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 412
Target Start/End: Original strand, 24600127 - 24600171
Alignment:
Q  368 tcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24600127 tcatggttgcaccccaaaatgacaagattaccctttcataaaatt 24600171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 31527637 - 31527592
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  31527637 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 31527592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 33280835 - 33280880
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  33280835 atcatggttgtaccccaaaatgacaagattaccctttcataaaatt 33280880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43518351 - 43518306
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  43518351 atcatggttgcaccccaaaatgacaagagtaccctttcataaaatt 43518306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 8232573 - 8232614
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  8232573 tggttgcaccccaaaatgataagattaccctttcataaaatt 8232614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 19034780 - 19034735
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  19034780 atcatggttgcaccccaaaataacaagattatcctttcataaaatt 19034735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 19617782 - 19617737
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19617782 atcatagttgcaccccaaaataacaagattaccctttcataaaatt 19617737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 29920316 - 29920361
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  29920316 atcatggttgcacctcaaaataacaagattaccctttcataaaatt 29920361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43293717 - 43293672
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  43293717 atcatggttgcaccccaaaatgacaagattatccttttataaaatt 43293672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 7338650 - 7338691
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  7338650 tggttgcaccccaaaatgacaaaattaccttttcataaaatt 7338691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 10666192 - 10666151
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  10666192 tggttgcaccccaaaatgacaaaattacccttccataaaatt 10666151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 18864460 - 18864501
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  18864460 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 18864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 31484679 - 31484720
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  31484679 tggttgcaccccaaaatgacaaaattacccttccataaaatt 31484720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 36294207 - 36294252
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||    
T  36294207 atcatggttacaccccaaaatgacaaaattacccttccataaaatt 36294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 37865901 - 37865946
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||||    
T  37865901 atcatgattgcaccccaaaatgacaaaattatcctttcataaaatt 37865946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 40738922 - 40738963
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  40738922 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 40738963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 412
Target Start/End: Complemental strand, 37274667 - 37274629
Alignment:
Q  374 ttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  37274667 ttgcaccccaaaatgacaaaattacccttccataaaatt 37274629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 4621176 - 4621217
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  4621176 tggttgcatcctaaaatgacaaaattaccctttcataaaatt 4621217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 41881975 - 41881934
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  41881975 tggttgcaccccaaaatgacaaaattacctttccataaaatt 41881934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 613849 - 613894
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  613849 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 613894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 20434188 - 20434233
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20434188 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 20434233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 20737716 - 20737761
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20737716 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 20737761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 39540473 - 39540428
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39540473 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 39540428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 42724253 - 42724208
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42724253 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 42724208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 52913265 - 52913220
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  52913265 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 52913220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 53036087 - 53036042
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53036087 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 53036042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 53875182 - 53875137
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  53875182 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 53875137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 55219893 - 55219938
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  55219893 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 55219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 56018765 - 56018720
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  56018765 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 56018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 56362844 - 56362889
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  56362844 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 56362889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 10542104 - 10542059
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  10542104 atcatggttgcaccccaaaatgacaatattaccctttcataaaatt 10542059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 19874194 - 19874149
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  19874194 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 19874149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 25857566 - 25857611
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  25857566 atcatggttgcaccccaaaatgacaagattaccttttcataaaatt 25857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 28406510 - 28406465
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  28406510 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 28406465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 55215665 - 55215620
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  55215665 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 55215620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 370 - 412
Target Start/End: Complemental strand, 37234274 - 37234232
Alignment:
Q  370 atggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  37234274 atggttgcaccccaaaatgacaagattatcctttcataaaatt 37234232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 23895267 - 23895222
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||    
T  23895267 atcatggttgcatcccaaaatgacaagattatcctttcataaaatt 23895222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 42348686 - 42348731
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  42348686 atcatggttgcaccctaaaatgacaagattatcctttcataaaatt 42348731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43458463 - 43458418
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  43458463 atcatggttgcaccccaaaatgacaaaattacccttccataaaatt 43458418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 43830289 - 43830244
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||    
T  43830289 atcatggttgcacctcaaaatgacaatattaccctttcataaaatt 43830244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 52839804 - 52839759
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  52839804 atcatggttgcaccccaaaacgacaaaattaccctttcataaaatt 52839759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 55183599 - 55183554
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  55183599 atcatggttgcaccccaaaatgataagattactctttcataaaatt 55183554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 22301812 - 22301771
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  22301812 tggttgcaccccaaaataacaaaattaccctttcataaaatt 22301771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 35339712 - 35339671
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  35339712 tggttgcaccctaaaatgacaagattacccttccataaaatt 35339671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 38291927 - 38291882
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||    
T  38291927 atcatggttgcaccaaaaaatgacaagattaacctttcataaaatt 38291882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 47467479 - 47467434
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||    
T  47467479 atcatggttgcatcccaaaatgacaaaattacccttccataaaatt 47467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 412
Target Start/End: Original strand, 8713260 - 8713295
Alignment:
Q  377 caccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||| |||||||||||||||||||    
T  8713260 caccccaaaatgacaaaattaccctttcataaaatt 8713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 49393 - 49352
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| | |||||||||| |||||||||||||||||||    
T  49393 tggttgcactctaaaatgacaaaattaccctttcataaaatt 49352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 24034548 - 24034589
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||| ||||||||||||||| ||||||||| |||||||||    
T  24034548 tggttgtaccccaaaatgacaaaattacccttccataaaatt 24034589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 24897015 - 24897056
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||| |||||||||||||||| ||||| |||||||||||||    
T  24897015 tggttacaccccaaaatgacaaaattactctttcataaaatt 24897056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 31709741 - 31709786
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  31709741 atcatggttgcaccttaaaatgacaagattatccttttataaaatt 31709786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 40430152 - 40430193
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  40430152 tggttgcaccctaaaatgacaaaattacccttccataaaatt 40430193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 52307529 - 52307484
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| || ||||||| ||||||| ||||||||||||||    
T  52307529 atcatggttgcatcctaaaatgataagattatcctttcataaaatt 52307484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 84414 - 84459
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  84414 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 84459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 10841503 - 10841458
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10841503 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 10841458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 10999817 - 10999772
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10999817 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 10999772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 20048360 - 20048405
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20048360 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 20048405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 20835653 - 20835608
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20835653 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 20835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 24395121 - 24395166
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24395121 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 24395166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 25710912 - 25710957
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25710912 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 25710957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 32236158 - 32236203
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32236158 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32236203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 38871146 - 38871191
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38871146 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38871191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 40586242 - 40586197
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40586242 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 40586197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 4044879 - 4044834
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4044879 atcatggttgcaccccaaaataacaagattaccctttcataaaatt 4044834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 4516085 - 4516040
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  4516085 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 4516040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 7679768 - 7679723
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  7679768 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 7679723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 20657458 - 20657413
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  20657458 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 20657413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 22781978 - 22781933
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  22781978 atcatggttgcaccacaaaatgacaagattaccctttcataaaatt 22781933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 26090227 - 26090272
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  26090227 atcatggttgcacctcaaaatgacaagattaccctttcataaaatt 26090272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 33712694 - 33712649
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33712694 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 33712649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 33966921 - 33966966
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  33966921 atcatggttgcatcccaaaatgacaagattaccctttcataaaatt 33966966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 37971745 - 37971700
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  37971745 atcatggttgcaccccaaaatgacaagattatcctttcataaaatt 37971700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 53974336 - 53974381
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  53974336 atcatggttgcaccccaaaatgacaagattacccattcataaaatt 53974381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 672093 - 672138
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  672093 atcatggttgcactccaaaatgataagattaccctttcataaaatt 672138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 7156742 - 7156697
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  7156742 atcatggttgcatcccaaaatgataagattaccctttcataaaatt 7156697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 36430293 - 36430338
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||    
T  36430293 atcatggttgcaccccaaaatgacaagattactctttgataaaatt 36430338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 412
Target Start/End: Complemental strand, 6268422 - 6268384
Alignment:
Q  374 ttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  6268422 ttgcaccccaaaatgacaagattaccctttcctaaaatt 6268384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 35039602 - 35039643
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  35039602 tggttgcaccccaaaatgacaaaattacccttccataaaatt 35039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 36232738 - 36232697
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  36232738 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 36232697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 36885807 - 36885766
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  36885807 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 36885766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 38145307 - 38145266
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  38145307 tggttgcaccctaaaatgacaaaattaccctttcataaaatt 38145266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 41069862 - 41069906
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  41069862 atcatggttgcacct-aaaatgacaagattaccctttcataaaatt 41069906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 7681070 - 7681029
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  7681070 tggttgcaccctaaaatgacaaaattacccttccataaaatt 7681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 11123888 - 11123929
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||| |||||||||||||| ||||||||| |||||||||    
T  11123888 tggttgcgccccaaaatgacaaaattacccttccataaaatt 11123929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 927090 - 927135
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  927090 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 1481837 - 1481882
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1481837 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 1481882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 13196196 - 13196151
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13196196 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 13196151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 15011845 - 15011890
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15011845 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 15011890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 25853491 - 25853446
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25853491 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 25853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 32551726 - 32551681
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32551726 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 44143386 - 44143431
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44143386 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 44143431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 45505844 - 45505799
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45505844 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 45505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 1520202 - 1520247
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1520202 atcatggttgcaccccaaaatgataagattaccctttcataaaatt 1520247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 10638804 - 10638849
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  10638804 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 10638849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 35895518 - 35895563
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35895518 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 39697836 - 39697791
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  39697836 atcatagttgcaccccaaaatgacaagattaccctttcataaaatt 39697791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 43577029 - 43577074
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  43577029 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 43577074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 2390745 - 2390700
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  2390745 atcatggttgcaccctaaaatgacaagattatcctttcataaaatt 2390700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 3178252 - 3178297
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  3178252 atcatggttgcaccctaaaatgataagattaccctttcataaaatt 3178297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 21657953 - 21657998
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  21657953 atcatggttgcaccctaaaatgacaagattatcctttcataaaatt 21657998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 27980970 - 27980925
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  27980970 atcatggttacaccccaaaatgacaagattatcctttcataaaatt 27980925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 28067500 - 28067455
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28067500 atcatggttacaccccaaaatgacaagattatcctttcataaaatt 28067455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 34202305 - 34202350
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  34202305 atcatggttacaccccaaaatgacaagattatcctttcataaaatt 34202350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 40811831 - 40811786
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  40811831 atcatggttgcaccccaaaatgaaaagattatcctttcataaaatt 40811786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 42342994 - 42343039
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  42342994 atcatggttgcaccccaaaatgataagattatcctttcataaaatt 42343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 4331936 - 4331895
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||| || |||||||||| |||||||||||||||||||    
T  4331936 tggttgcatcctaaaatgacaaaattaccctttcataaaatt 4331895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 26171006 - 26171047
Alignment:
Q  371 tggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||||| |||| ||||||||| |||||||||    
T  26171006 tggttgcaccccaaaataacaaaattacccttccataaaatt 26171047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Original strand, 13888 - 13933
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  13888 atcatggttgcaccctaaaatgacaagattaccctttcataaaatt 13933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 38470 - 38425
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  38470 atcatggttgcactccaaaatgacaagattaccctttcataaaatt 38425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 3082 - 3037
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  3082 atcatggttgcaccccaaaatgacaatattacccttttataaaatt 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 157173 - 157128
Alignment:
Q  367 atcatggttgcaccccaaaatgacaagattaccctttcataaaatt 412  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  157173 atcatggttgcaccaaaaaatgacaagattaccctttcataaaatt 157128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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