View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7550_low_44 (Length: 382)

Name: NF7550_low_44
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7550_low_44
NF7550_low_44
[»] chr7 (42 HSPs)
chr7 (1-370)||(4567749-4568117)
chr7 (133-370)||(16197219-16197454)
chr7 (133-314)||(39618114-39618294)
chr7 (110-317)||(2271333-2271539)
chr7 (135-304)||(3835270-3835440)
chr7 (133-291)||(37124624-37124782)
chr7 (133-370)||(27723656-27723882)
chr7 (158-318)||(41690203-41690364)
chr7 (133-304)||(35792524-35792695)
chr7 (138-361)||(2798738-2798966)
chr7 (133-317)||(10534441-10534625)
chr7 (159-278)||(47541912-47542034)
chr7 (138-316)||(28226735-28226914)
chr7 (177-315)||(2273298-2273434)
chr7 (182-304)||(8614586-8614709)
chr7 (178-259)||(4962613-4962694)
chr7 (147-259)||(39434426-39434539)
chr7 (195-302)||(12394659-12394767)
chr7 (185-286)||(39599424-39599527)
chr7 (133-280)||(17270066-17270213)
chr7 (181-259)||(14771096-14771174)
chr7 (181-259)||(15221548-15221626)
chr7 (147-259)||(4678857-4678972)
chr7 (178-259)||(24393759-24393840)
chr7 (181-259)||(39429995-39430074)
chr7 (217-304)||(41747010-41747097)
chr7 (151-292)||(10025843-10025985)
chr7 (133-280)||(33258873-33259022)
chr7 (219-314)||(43368971-43369064)
chr7 (183-257)||(15643633-15643708)
chr7 (218-280)||(7808798-7808860)
chr7 (178-255)||(46671697-46671775)
chr7 (176-286)||(21529149-21529255)
chr7 (147-259)||(25290949-25291061)
chr7 (180-262)||(1719580-1719663)
chr7 (133-212)||(12394776-12394855)
chr7 (193-286)||(14734638-14734732)
chr7 (331-370)||(35792727-35792766)
chr7 (184-278)||(27062043-27062137)
chr7 (334-368)||(37124615-37124649)
chr7 (337-370)||(2271548-2271581)
chr7 (331-367)||(10534647-10534683)
[»] chr3 (40 HSPs)
chr3 (133-370)||(45646957-45647196)
chr3 (133-303)||(2599490-2599661)
chr3 (133-307)||(16237008-16237183)
chr3 (133-318)||(45667852-45668042)
chr3 (135-311)||(2094192-2094369)
chr3 (133-370)||(27817797-27818042)
chr3 (133-302)||(5494055-5494223)
chr3 (133-278)||(38750473-38750618)
chr3 (133-280)||(9589212-9589363)
chr3 (134-318)||(34669095-34669281)
chr3 (159-318)||(6749359-6749518)
chr3 (133-271)||(37030386-37030526)
chr3 (158-275)||(633076-633193)
chr3 (133-277)||(21933922-21934065)
chr3 (138-280)||(376168-376310)
chr3 (133-370)||(296817-297053)
chr3 (135-290)||(27264245-27264399)
chr3 (158-286)||(1405329-1405462)
chr3 (176-280)||(19229319-19229423)
chr3 (176-302)||(45759121-45759248)
chr3 (133-271)||(34823614-34823752)
chr3 (185-280)||(21916016-21916112)
chr3 (159-280)||(6472283-6472402)
chr3 (178-259)||(7259363-7259445)
chr3 (178-259)||(13779145-13779227)
chr3 (154-280)||(42735057-42735183)
chr3 (178-259)||(21959385-21959467)
chr3 (326-370)||(21934134-21934178)
chr3 (158-256)||(25841507-25841603)
chr3 (217-315)||(22722248-22722346)
chr3 (188-280)||(19578498-19578588)
chr3 (219-280)||(1272678-1272739)
chr3 (333-370)||(37030581-37030618)
chr3 (332-370)||(45759279-45759317)
chr3 (178-286)||(388872-388980)
chr3 (334-370)||(7259512-7259548)
chr3 (244-280)||(12568835-12568871)
chr3 (244-280)||(13545299-13545335)
chr3 (338-370)||(25841674-25841706)
chr3 (192-224)||(53940119-53940151)
[»] chr5 (34 HSPs)
chr5 (135-370)||(8544148-8544383)
chr5 (133-293)||(17201895-17202056)
chr5 (133-370)||(12436153-12436392)
chr5 (133-286)||(6428534-6428688)
chr5 (133-314)||(32474594-32474775)
chr5 (133-370)||(19804121-19804363)
chr5 (148-368)||(11991712-11991933)
chr5 (148-291)||(28620492-28620635)
chr5 (147-304)||(42673502-42673659)
chr5 (178-370)||(18412830-18413023)
chr5 (176-304)||(39940181-39940309)
chr5 (135-370)||(1583874-1584114)
chr5 (135-280)||(1584159-1584301)
chr5 (147-259)||(36059583-36059695)
chr5 (139-318)||(25612737-25612915)
chr5 (133-278)||(248913-249057)
chr5 (147-280)||(37270032-37270165)
chr5 (147-259)||(20202161-20202274)
chr5 (133-228)||(39585370-39585465)
chr5 (176-289)||(11825241-11825355)
chr5 (147-249)||(17558305-17558407)
chr5 (181-363)||(13219871-13220055)
chr5 (181-286)||(14967822-14967928)
chr5 (178-259)||(16366043-16366125)
chr5 (161-279)||(36244539-36244657)
chr5 (151-262)||(19133067-19133170)
chr5 (184-259)||(14655303-14655380)
chr5 (227-302)||(17200502-17200577)
chr5 (331-370)||(39585469-39585508)
chr5 (332-368)||(6428455-6428491)
chr5 (331-370)||(42673690-42673729)
chr5 (178-259)||(32717665-32717746)
chr5 (219-268)||(39615132-39615181)
chr5 (334-370)||(14655204-14655240)
[»] chr4 (44 HSPs)
chr4 (133-315)||(9808039-9808220)
chr4 (133-370)||(54982174-54982410)
chr4 (133-292)||(24073351-24073511)
chr4 (133-286)||(17330867-17331020)
chr4 (133-368)||(49299338-49299576)
chr4 (135-370)||(47943980-47944205)
chr4 (135-286)||(50721384-50721535)
chr4 (139-370)||(38839921-38840153)
chr4 (135-314)||(45666729-45666907)
chr4 (133-297)||(37209562-37209725)
chr4 (135-269)||(1821091-1821224)
chr4 (133-370)||(19443064-19443292)
chr4 (133-286)||(34031486-34031642)
chr4 (133-301)||(53393805-53393974)
chr4 (133-279)||(49263525-49263672)
chr4 (133-253)||(9088763-9088884)
chr4 (178-259)||(38433904-38433985)
chr4 (147-266)||(41503030-41503150)
chr4 (135-255)||(46430421-46430542)
chr4 (133-363)||(6949400-6949619)
chr4 (184-280)||(20782898-20782995)
chr4 (139-259)||(24537928-24538047)
chr4 (158-280)||(33890061-33890182)
chr4 (158-279)||(2685076-2685198)
chr4 (158-280)||(53370095-53370216)
chr4 (182-259)||(55344059-55344137)
chr4 (181-286)||(46250303-46250408)
chr4 (245-366)||(9089141-9089264)
chr4 (181-251)||(46016435-46016505)
chr4 (147-257)||(37371052-37371166)
chr4 (135-280)||(38044266-38044406)
chr4 (226-369)||(25494161-25494306)
chr4 (182-275)||(22349401-22349493)
chr4 (133-194)||(25494305-25494366)
chr4 (177-270)||(26625650-26625740)
chr4 (176-255)||(31104813-31104893)
chr4 (181-258)||(45634984-45635063)
chr4 (135-190)||(46196526-46196581)
chr4 (332-370)||(24073751-24073789)
chr4 (333-370)||(1821278-1821315)
chr4 (333-370)||(2493533-2493570)
chr4 (185-241)||(33809416-33809473)
chr4 (333-370)||(33889954-33889991)
chr4 (332-361)||(46016530-46016559)
[»] chr1 (35 HSPs)
chr1 (133-365)||(41117355-41117591)
chr1 (133-317)||(13254164-13254349)
chr1 (133-291)||(36319458-36319616)
chr1 (133-314)||(6295209-6295391)
chr1 (133-280)||(52415606-52415755)
chr1 (133-276)||(39386993-39387137)
chr1 (133-279)||(23698861-23699008)
chr1 (160-280)||(11795508-11795628)
chr1 (138-304)||(19270111-19270275)
chr1 (158-315)||(2752078-2752235)
chr1 (133-261)||(1394831-1394959)
chr1 (147-280)||(4395560-4395692)
chr1 (182-304)||(10430151-10430273)
chr1 (161-266)||(32769462-32769569)
chr1 (158-278)||(40518628-40518747)
chr1 (196-304)||(45925844-45925953)
chr1 (147-280)||(4671873-4672007)
chr1 (147-259)||(31622809-31622922)
chr1 (143-275)||(30281082-30281213)
chr1 (327-370)||(40518820-40518863)
chr1 (178-259)||(11237656-11237738)
chr1 (181-259)||(23697483-23697561)
chr1 (135-215)||(11817513-11817593)
chr1 (326-370)||(30280962-30281006)
chr1 (133-235)||(52957710-52957812)
chr1 (178-259)||(786641-786724)
chr1 (181-258)||(2656190-2656269)
chr1 (176-315)||(21965686-21965826)
chr1 (176-280)||(36964480-36964584)
chr1 (181-257)||(43021437-43021512)
chr1 (326-370)||(32769344-32769388)
chr1 (326-370)||(52415492-52415536)
chr1 (331-370)||(6295412-6295451)
chr1 (331-370)||(13254369-13254408)
chr1 (183-280)||(1453955-1454053)
[»] chr8 (30 HSPs)
chr8 (135-316)||(5871260-5871442)
chr8 (138-370)||(14896940-14897172)
chr8 (133-370)||(27232040-27232277)
chr8 (136-314)||(38401960-38402136)
chr8 (133-370)||(32234057-32234292)
chr8 (158-314)||(34146692-34146849)
chr8 (163-305)||(7694941-7695084)
chr8 (133-278)||(29315253-29315399)
chr8 (179-370)||(11087526-11087721)
chr8 (133-257)||(1256253-1256378)
chr8 (158-370)||(34039250-34039458)
chr8 (133-271)||(35970094-35970232)
chr8 (133-288)||(1530220-1530376)
chr8 (158-280)||(3742190-3742313)
chr8 (147-259)||(3443350-3443464)
chr8 (181-259)||(9455560-9455639)
chr8 (326-370)||(36682982-36683026)
chr8 (181-259)||(2742601-2742684)
chr8 (133-254)||(36683400-36683520)
chr8 (176-279)||(35970503-35970604)
chr8 (179-266)||(25307515-25307602)
chr8 (326-369)||(29315473-29315516)
chr8 (229-315)||(30887514-30887600)
chr8 (195-279)||(16892608-16892690)
chr8 (177-230)||(25444462-25444515)
chr8 (159-215)||(38459085-38459141)
chr8 (333-370)||(38401908-38401945)
chr8 (196-278)||(39140050-39140134)
chr8 (334-370)||(7578009-7578045)
chr8 (226-262)||(7940414-7940450)
[»] chr6 (18 HSPs)
chr6 (135-315)||(8049778-8049961)
chr6 (176-370)||(2437285-2437479)
chr6 (135-280)||(25057020-25057165)
chr6 (133-314)||(14093227-14093409)
chr6 (179-279)||(23410988-23411089)
chr6 (133-280)||(26252026-26252173)
chr6 (147-259)||(21526951-21527064)
chr6 (158-286)||(6110665-6110794)
chr6 (147-259)||(7972289-7972402)
chr6 (133-253)||(6026522-6026642)
chr6 (158-280)||(31656043-31656166)
chr6 (159-315)||(31660870-31661027)
chr6 (178-276)||(21013160-21013257)
chr6 (181-277)||(9353611-9353706)
chr6 (233-315)||(8049675-8049757)
chr6 (178-280)||(31871454-31871556)
chr6 (237-280)||(4123132-4123175)
chr6 (334-370)||(7972466-7972502)
[»] scaffold1327 (1 HSPs)
scaffold1327 (135-370)||(1140-1375)
[»] scaffold0005 (2 HSPs)
scaffold0005 (136-317)||(257205-257386)
scaffold0005 (181-259)||(271926-272006)
[»] chr2 (41 HSPs)
chr2 (133-370)||(16806052-16806280)
chr2 (133-370)||(16845333-16845561)
chr2 (133-291)||(29408347-29408504)
chr2 (138-317)||(11084315-11084495)
chr2 (133-291)||(3309425-3309583)
chr2 (133-279)||(1397941-1398083)
chr2 (176-280)||(25713870-25713976)
chr2 (176-257)||(45271898-45271979)
chr2 (133-280)||(41541627-41541775)
chr2 (140-318)||(42871927-42872102)
chr2 (182-291)||(21253025-21253136)
chr2 (178-280)||(36243575-36243677)
chr2 (146-286)||(44898631-44898772)
chr2 (161-280)||(157652-157771)
chr2 (133-370)||(20170930-20171163)
chr2 (147-259)||(34424408-34424521)
chr2 (178-259)||(4959040-4959122)
chr2 (146-370)||(15507818-15508045)
chr2 (138-280)||(25713514-25713658)
chr2 (181-257)||(27746964-27747041)
chr2 (247-370)||(45272930-45273061)
chr2 (147-256)||(12412943-12413054)
chr2 (147-256)||(12425003-12425114)
chr2 (194-315)||(4700743-4700864)
chr2 (159-259)||(7485738-7485839)
chr2 (178-259)||(25965312-25965394)
chr2 (138-368)||(4316986-4317216)
chr2 (181-286)||(13588490-13588595)
chr2 (334-370)||(33660064-33660100)
chr2 (147-280)||(33660583-33660715)
chr2 (178-286)||(408020-408127)
chr2 (191-255)||(11814722-11814787)
chr2 (185-262)||(37814934-37815011)
chr2 (327-370)||(32113128-32113171)
chr2 (180-252)||(4135777-4135850)
chr2 (341-370)||(21253014-21253043)
chr2 (334-370)||(3309558-3309594)
chr2 (334-370)||(4959190-4959226)
chr2 (334-370)||(25965465-25965501)
chr2 (334-370)||(29408479-29408515)
chr2 (338-370)||(34424595-34424627)
[»] scaffold1986 (1 HSPs)
scaffold1986 (135-318)||(561-747)
[»] scaffold0841 (2 HSPs)
scaffold0841 (176-280)||(4208-4313)
scaffold0841 (138-280)||(3852-3996)
[»] scaffold0188 (1 HSPs)
scaffold0188 (138-315)||(5619-5798)
[»] scaffold0637 (1 HSPs)
scaffold0637 (177-279)||(3809-3910)
[»] scaffold1130 (2 HSPs)
scaffold1130 (178-259)||(707-788)
scaffold1130 (334-370)||(603-639)
[»] scaffold0006 (2 HSPs)
scaffold0006 (178-259)||(45977-46060)
scaffold0006 (334-370)||(46128-46164)
[»] scaffold0097 (1 HSPs)
scaffold0097 (159-259)||(48529-48629)
[»] scaffold0785 (1 HSPs)
scaffold0785 (179-266)||(5431-5518)
[»] scaffold0018 (1 HSPs)
scaffold0018 (159-224)||(184574-184639)


Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 370
Target Start/End: Complemental strand, 4568117 - 4567749
Alignment:
Q  1 atacaaatagtaatgcaaaaaactaaaagatatggaagaaaagagatttataattgtttcccatttcgtcctcacttcagggtacctccacttttcttga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  4568117 atacaaatagtaatgcaaaaaactaaaagatatggaagaaaagagatttataattgtttcccatttcgtcctcacttc-gggtacctccatttttattga 4568019  T
Q  101 tactacattcgtttctttttaagtgnnnnnnnagaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaa 200  Q
    | |||||||||||||||||||| ||       |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  4568018 tgctacattcgtttctttttaaatgtctttttagaaaattaacatcaaaatagcgcagtgtatttttacacgttatctttctattataccctcattttaa 4567919  T
Q  201 tccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatattt 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  4567918 tccaccactaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcataacaaacaattgtcaattattatcttt 4567819  T
Q  301 ttcttcagcaaattcctannnnnnngcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| ||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||    
T  4567818 ttcttcggcaaatttctattttcttgcacactctctctcataacaaacaattgttaattttctaaatatt 4567749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 16197454 - 16197219
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||||||| ||||||||||||| ||| || |||| |||||||||||||||||||||||| || ||||||| ||||||||||| | ||    
T  16197454 agaaaattaacaccaaaatagtgatgtgtatttttgcacattttctttctattataccctcattttaatccatcaataaattcctattttttgcataaac 16197355  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||| ||||| | || ||||||||||       |||||      
T  16197354 tttatctttccaataaatttaatatgttatctttctcttgtaacaaacaattgtcagttattatctttttttccaacaaattcctatttttttgcaca-- 16197257  T
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  16197256 ctctctcataacaaacaattgtcaattttttaaatatt 16197219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 133 - 314
Target Start/End: Complemental strand, 39618294 - 39618114
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacaca 231  Q
    ||||||||||||| ||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |    
T  39618294 agaaaattaacataaaaatatagatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcttatttttttgcacata 39618195  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
     |||||||||||||||||||||  ||||||| |||||||| |||||||| |||| || |||||||||||||||||| ||||||    
T  39618194 ttttatctttccaataaattta--atgttatttttctctcataacaaacaattgccagttattatatttttcttcaacaaatt 39618114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 110 - 317
Target Start/End: Original strand, 2271333 - 2271539
Alignment:
Q  110 cgtttctttttaagtgnnnnnnnagaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccatt 209  Q
    ||||||||||||||||       || ||||||||| |||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||| |||| |    
T  2271333 cgtttctttttaagtgtctttttaggaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattatatcctcattttaatctaccact 2271432  T
Q  210 aaattcttatt-ttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcag 308  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||| ||     
T  2271433 aaattcttattgttttccacaccctttatctttccaat-aatttaatatgttat-tttctctcgtaacaaacaattgtcagttattatctctttctccaa 2271530  T
Q  309 caaattcct 317  Q
    |||||||||    
T  2271531 caaattcct 2271539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 135 - 304
Target Start/End: Original strand, 3835270 - 3835440
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacact 233  Q
    ||||||| ||||||||||||||||||||||||| || | | ||||||||||||| |||||||||||||||| | ||||||| |||||| |||||||||||    
T  3835270 aaaattaccatcaaaatagcgatgtgtatttttccatgatttcttcctattatatcctcattttaatccacgaataaattcctatttttttgcacacact 3835369  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttct 304  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| | | ||| ||||||| |||||||    
T  3835370 ttatctttccaataaatttaatatgttatctttctcttgtaacaaacaaatttcagttattatttttttct 3835440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 37124782 - 37124624
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||| |||||||||||| |||||| ||||| ||| || ||||||||||||||||| ||||||||| || | ||||||| | ||||||||||||||    
T  37124782 agaaaattagcatcaaaatagcaatgtgtgtttttgcacattttcttcctattataccctgattttaatcaacaaataaattcattttttttgcacacac 37124683  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatt 291  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  37124682 tttatctttccaataaatttaatatgttatctttctctcataacaaacaattgtcaatt 37124624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 27723882 - 27723656
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||||||||||||| |||||||| |  || |||||||||||||||||||||||||||||||| ||||||  |||||    |||||||    
T  27723882 agaaaattaacaccaaaatagcgatgtatatttttaaatattttcttcctattataccctcattttaatccaccaataaatttctattt----cacacac 27723787  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||       |||||||| | ||||||| || ||||||||||        | ||||    
T  27723786 tttatctttccaataaatttaatatgttatttttctcctgtaacaaa-------caattattgtctttttctccaacaaattcctatgcttttacgcact 27723694  T
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27723693 ctctctcataacaaacaattgtcaattttctaaatatt 27723656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 318
Target Start/End: Complemental strand, 41690364 - 41690203
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaata 256  Q
    |||||||||||||| || ||||  |||||||||||||||||||| ||| | ||||||| || ||||| ||||| ||||||| ||||||||||||||||||    
T  41690364 gtgtatttttacacattttctttttattataccctcattttaattcacgaataaattcctactttttagcacaaactttatatttccaataaatttaata 41690265  T
Q  257 tgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||| || ||||||||||    
T  41690264 tgttatatttatctcgtaacaaacaattgtcaattattatctttttctccaacaaattccta 41690203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 133 - 304
Target Start/End: Original strand, 35792524 - 35792695
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgca-caca 231  Q
    ||||||||||||  ||||||||||||||||||||| ||  || | |||||||||||||||||||| | ||||||| ||||||| ||||||||    ||||    
T  35792524 agaaaattaacacaaaaatagcgatgtgtatttttgcatatttttttcctattataccctcattt-actccaccaataaattcctattttttatttcaca 35792622  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttct 304  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| | ||||||| |||||||    
T  35792623 ctttatctttctaataaatttaatatgttatctttctctcgtaacaaacaattgtaacttattatctttttct 35792695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 138 - 361
Target Start/End: Complemental strand, 2798966 - 2798738
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacacttta 236  Q
    ||||||| |||| ||| || |||||||||| ||  ||  |||||||||||||||| ||| |||||||||| || |||  |||||||| |||||||||||     
T  2798966 attaacaccaaattagtgaagtgtatttttgcatctttacttcctattatacccttattctaatccaccaatatatttctatttttttgcacacactttc 2798867  T
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacac----t 332  Q
    |||||| ||||||||||||||||||| |||| |||||||||||| ||| | ||||| ||||||||||| || ||||||||||       ||||||    |    
T  2798866 tctttctaataaatttaatatgttatctttcgctcgtaacaaacaatttttaattactatatttttctccaacaaattcctatttttttgcacactcttt 2798767  T
Q  333 ctctctcataacaaacaattgttaatttt 361  Q
    |||||||||||||||||||||| ||||||    
T  2798766 ctctctcataacaaacaattgtcaatttt 2798738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 317
Target Start/End: Original strand, 10534441 - 10534625
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacaca 231  Q
    |||||||||||| ||||||| |||||||||||||| ||| || | ||  ||||||||| |||||||||||||||| ||||||| |||||| |||||||||    
T  10534441 agaaaattaacaccaaaataacgatgtgtatttttgcacttttttttt-tattataccttcattttaatccaccaataaattcctatttttttgcacaca 10534539  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcct 317  Q
     ||||| |||  ||||||||||||||||||| ||| | ||||||||||| ||||||  ||||||| ||||||| || |||||||||    
T  10534540 ttttatttttttaataaatttaatatgttatctttatgtcgtaacaaacaattgtctgttattatctttttctccaacaaattcct 10534625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 47542034 - 47541912
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaatt---ct-tattttttgcacacactttatctttccaataaatttaa 254  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||   || | |||||||| |||||||||||||||||||||||||||    
T  47542034 tgtatttttgcacgttttcttcctattatacc-tcattttaatccaccaataaatttctctgttttttttgcgcacactttatctttccaataaatttaa 47541936  T
Q  255 tatgttatatttctctcgtaacaa 278  Q
    ||||||||||||||||||||||||    
T  47541935 tatgttatatttctctcgtaacaa 47541912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 316
Target Start/End: Complemental strand, 28226914 - 28226735
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacacacttta 236  Q
    ||||||| |||| |||||||||||||||||  |  ||  |||||||||||||||| |||||||||||  | || |||| |||| ||||||||||| | ||    
T  28226914 attaacaccaaattagcgatgtgtatttttgtatctttacttcctattatacccttattttaatccaataatatattcctattgttttgcacacattata 28226815  T
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcc 316  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||| | ||| ||| ||||||| || ||||||||    
T  28226814 tctttccaataaatttaatatgttatctttctatcgtaacaaacaattgttagttaatatctttttctccaacaaattcc 28226735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 315
Target Start/End: Original strand, 2273298 - 2273434
Alignment:
Q  177 cttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaac 276  Q
    |||||||||||||||| ||||||||  |||| || |||| |||||||| |||||||||| ||||| |||||||||||  ||||||| |||||||||||||    
T  2273298 cttcctattatacccttattttaatgtaccaatatattcctatttttttcacacactttctcttttcaataaattta--atgttatctttctctcgtaac 2273395  T
Q  277 aaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    |||| ||||| | ||||||| |||||||||| |||||||    
T  2273396 aaacaattgttagttattatctttttcttcaacaaattc 2273434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 8614586 - 8614709
Alignment:
Q  182 tattataccctcattttaatccaccattaaattcttatttttt--gcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    ||||||||| |||||||||||||||| ||||||| | ||||||  |||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||    
T  8614586 tattataccttcattttaatccaccaataaattcctcttttttttgcacacactttatctttctaataaatt-aatatattatctttctctcgtaacaaa 8614684  T
Q  280 cgattgtcaattattatatttttct 304  Q
    | ||||||| ||||||| |||||||    
T  8614685 caattgtcagttattatctttttct 8614709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 4962613 - 4962694
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| || | ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  4962613 ttcctattataccctcattttaatcaactaataatttcctattttttgcacacactttatctttccaataaatttaatatgt 4962694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 39434539 - 39434426
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaa 245  Q
    |||||||||| |||||||||| |||  | | ||||||||||||||| ||||||||| || | ||| ||| ||||||| ||||||||||||||||||||||    
T  39434539 aaaatagcgaagtgtatttttgcacacttttttcctattatacccttattttaatcgactaataatttcctatttttgtgcacacactttatctttccaa 39434440  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  39434439 taaatttaatatgt 39434426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 302
Target Start/End: Complemental strand, 12394767 - 12394659
Alignment:
Q  195 ttttaatccaccattaaattcttatt-ttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattat 293  Q
    ||||||||||||| |||  ||||||| ||||||||||| |||| ||||||||||||||||| ||||||| |||||||| |||||||| ||||||| ||||    
T  12394767 ttttaatccaccaataacatcttattgttttgcacacattttagctttccaataaatttaacatgttatctttctctcttaacaaacaattgtcagttat 12394668  T
Q  294 tatattttt 302  Q
    ||| |||||    
T  12394667 tatcttttt 12394659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 39599424 - 39599527
Alignment:
Q  185 tataccctcattttaatccaccattaaattcttattttttgcacacactt--tatctttccaataaatttaatatgttatatttctctcgtaacaaacga 282  Q
    |||||||| |||||||||||||| || |||| ||||||||||||||||||  | ||||| ||||||||||||||| |||| ||||| |||||||||||||    
T  39599424 tataccctaattttaatccaccaatatattcctattttttgcacacactttctctcttttcaataaatttaatatcttatttttctttcgtaacaaacga 39599523  T
Q  283 ttgt 286  Q
    ||||    
T  39599524 ttgt 39599527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 280
Target Start/End: Complemental strand, 17270213 - 17270066
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||| | |||||||  || |||| ||||||||| || | | |||||||||| |||||||||||||| || |  |||| ||||||||| | ||||    
T  17270213 agaaaattaataccaaaataatgaagtgtgtttttacacattttttccctattatactctcattttaatccatcaatttattcctattttttgtatacac 17270114  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||| || || ||||| ||||||||| ||||||||||||||||||||||    
T  17270113 tttctcgtttcaatatatttaatatattatatttctctcgtaacaaac 17270066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 14771096 - 14771174
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  14771096 ctattataccctcattttaatccactaataatttcctattttttgcacacactttatcttttcaataaattaaatatgt 14771174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 15221548 - 15221626
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  15221548 ctattataccctcattttaatccactaataatttcctattttttgcacacactttatcttttcaataaattaaatatgt 15221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 4678972 - 4678857
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcct---attataccctcattttaatccaccattaaattcttattttttgcacacactttatctttcc 243  Q
    |||||||||| |||||||||||||| || | || ||   |||||| |||||||||||||||| |  || ||| ||||||||| |||||||||||||||||    
T  4678972 aaaatagcgaagtgtatttttacactttttttttctcttattatatcctcattttaatccactaacaatttcatattttttgtacacactttatctttcc 4678873  T
Q  244 aataaatttaatatgt 259  Q
    ||||||||||||||||    
T  4678872 aataaatttaatatgt 4678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 24393759 - 24393840
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||| |||||||| |||||||||||||| | ||| || ||| ||||| ||||||||||||||||||||||||||||||||||    
T  24393759 ttccaattataccgtcattttaatccactaataattttttaattttttcacacactttatctttccaataaatttaatatgt 24393840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 39429995 - 39430074
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||| ||||||||| || ||||| ||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  39429995 ctattatacccttattttaatcaactattaatttcctatttttgtgcacacactttatcttttcaataaatttaatatgt 39430074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 41747010 - 41747097
Alignment:
Q  217 tattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttct 304  Q
    |||||||| ||| |||||| ||||| ||||||||||||||| |||| ||||||||||||||||| ||||| | ||| |||||||||||    
T  41747010 tatttttttcacgcactttctcttttcaataaatttaatattttatctttctctcgtaacaaacaattgttagttactatatttttct 41747097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 10025843 - 10025985
Alignment:
Q  151 tagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaa 249  Q
    |||||| || ||||||| ||| ||  |||| | ||||||||| ||||||||||| || || |||| | |||||| ||||||| ||| ||||| |||||||    
T  10025843 tagcgaagtttatttttgcacatttacttcttgttatacccttattttaatccatcaatacattcatgttttttagcacacaatttctcttttcaataaa 10025942  T
Q  250 tttaatatgttatatttctctcgtaacaaacgattgtcaatta 292  Q
    ||||||||||||| ||||| | ||||||||| ||||| |||||    
T  10025943 tttaatatgttatctttcttttgtaacaaacaattgttaatta 10025985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 280
Target Start/End: Complemental strand, 33259022 - 33258873
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc-----ttattttttgca 227  Q
    |||| ||||||| ||||||| ||| ||||||||||  |  || |||||||||||||||||||||||||||||||| || ||||     || |||||||||    
T  33259022 agaatattaacaccaaaataacgaagtgtatttttgtagattttcttcctattataccctcattttaatccaccaatatattcctatttttttttttgca 33258923  T
Q  228 cacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
     ||| |||   ||| |||||||||||||||| ||| ||||||| |||||||||    
T  33258922 tacatttt---ttttcaataaatttaatatggtatctttctcttgtaacaaac 33258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 43369064 - 43368971
Alignment:
Q  219 ttttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    ||||||||||||||| |  |||| |||||||||||||||||||| ||||||||||||||| | ||||| | ||||||| ||||||| || ||||||    
T  43369064 ttttttgcacacactct--cttttcaataaatttaatatgttatttttctctcgtaacaagcaattgttagttattatttttttctccaacaaatt 43368971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 15643708 - 15643633
Alignment:
Q  183 attataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatat 257  Q
    ||||||||||||||||||||||| | ||| ||  |||||||| ||||||| |||||||||||||||||||||||||    
T  15643708 attataccctcattttaatccactaataattttctatttttttgcacacattttatctttccaataaatttaatat 15643633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 7808798 - 7808860
Alignment:
Q  218 attttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||| | ||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  7808798 attttttgcacaaaatttctcttttcaataaatttaatatgttatatttctctcataacaaac 7808860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 46671697 - 46671775
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaat 255  Q
    ||||||||||||||||||||||| |||| | ||| ||  |||||| ||||||||||||||| |||||||||||||||||    
T  46671697 ttcctattataccctcattttaagccactaataattttctatttttttgcacacactttatttttccaataaatttaat 46671775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 21529149 - 21529255
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    |||||| ||||||||||||| | ||||||||| |||||||||||||||| |||| | ||| || |   ||||||| ||||||||||| |||||||| |||    
T  21529149 tcttccaattataccctcatgt-aatccaccaataaattcttatttttttcacaaaatttctcat---aataaatctaatatgttatctttctctcataa 21529244  T
Q  276 caaacgattgt 286  Q
    ||||| |||||    
T  21529245 caaacaattgt 21529255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 25291061 - 25290949
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaat 246  Q
    |||||||||| |||||||||| ||||   | ||||||||  | ||||||||||||||||   ||| ||| |||||||| |||||| |||||  |||||||    
T  25291061 aaaatagcgaagtgtatttttgcacgcatttttcctattggatcctcattttaatccactgataatttcctatttttttcacacattttatgattccaat 25290962  T
Q  247 aaatttaatatgt 259  Q
    |||||||||||||    
T  25290961 aaatttaatatgt 25290949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 1719580 - 1719663
Alignment:
Q  180 cctattataccctcattttaatccaccattaaattcttat-tttttgcacacactttatctttccaataaatttaatatgttat 262  Q
    ||||||||||| |  ||||||||||||| ||||||||||| ||||| || ||||||| ||||| ||||||||||||| ||||||    
T  1719580 cctattataccattgttttaatccaccaataaattcttatatttttacatacactttctcttttcaataaatttaatgtgttat 1719663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 12394855 - 12394776
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaa 212  Q
    ||||||| |||| |||||||  |||||| |||||| ||| || |||||||||||||| ||||||||||||||||| ||||    
T  12394855 agaaaatgaacaccaaaataatgatgtgcatttttgcacattttcttcctattatactctcattttaatccaccaataaa 12394776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 14734638 - 14734732
Alignment:
Q  193 cattttaatccaccattaaattcttattttttgcaca-cactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    ||||||||| || || |||||| |||||||||||| | |||||| | |||||||||||||| || |||||| |||||||  |||||||| |||||    
T  14734638 cattttaattcatcaataaatttttattttttgcaaaacactttctttttccaataaatttgatgtgttatttttctctgataacaaacaattgt 14734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 35792727 - 35792766
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  35792727 ctctctctcataacaaacaattgtcaattttctagatatt 35792766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 27062043 - 27062137
Alignment:
Q  184 ttataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    ||||||||||| ||||| |||| | ||||||||||||||||  |||   ||| |||||||||||||||| |  |||||| ||||| || ||||||    
T  27062043 ttataccctcaatttaacccacaaataaattcttattttttttacattttttctctttccaataaatttgacgtgttatctttctttcataacaa 27062137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 37124649 - 37124615
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaata 368  Q
    ||||||||||||||||||||| |||||||||||||    
T  37124649 tctctcataacaaacaattgtcaattttctaaata 37124615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 370
Target Start/End: Original strand, 2271548 - 2271581
Alignment:
Q  337 ctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||| |||||||||||||||    
T  2271548 ctcataacaaacaattgtcaattttctaaatatt 2271581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 10534647 - 10534683
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaat 367  Q
    |||||||||||||||||||||||| |||||| |||||    
T  10534647 ctctctctcataacaaacaattgtcaattttttaaat 10534683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 45647196 - 45646957
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||||||| |||||||||||||||||| || ||| || ||||||||||||||||||||||||||||  || ||||||| ||||||||||||||||    
T  45647196 agaaaattaacataaaaatagcgatgtgtattcttgcacattttcttcctattataccctcattttaatccgtcaataaattcatattttttgcacacac 45647097  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||| || ||||||||||       || ||||    
T  45647096 tttatctttccaataaatttaatatgttatctttctctcataacaaacaattgtcacttattatctttttctccaacaaattcctatttttttgcgcact 45646997  T
Q  333 c--tctctcataacaaacaattgttaattttctaaatatt 370  Q
    |  ||| || ||| |||||||||| |||||||||||||||    
T  45646996 ctatctttcgtaataaacaattgtcaattttctaaatatt 45646957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 133 - 303
Target Start/End: Complemental strand, 2599661 - 2599490
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    ||||||||||||  ||||||||||||||||||||| ||| || | |||||||||||||||||||||||||||||| ||||||| || ||||||||| ||     
T  2599661 agaaaattaacactaaaatagcgatgtgtatttttgcacattttattcctattataccctcattttaatccaccaataaattcatacttttttgcagact 2599562  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttc 303  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||    
T  2599561 ctttatctttccaataaatttaatatgttatctttctctcgtaacaaaccattgtcagttattatctttttc 2599490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 133 - 307
Target Start/End: Original strand, 16237008 - 16237183
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacaca 231  Q
    ||||||||||||  ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||  | ||||||| |||||| |||||||||    
T  16237008 agaaaattaacacaaaaatagcgatgtgtattttttcacattttcttcctattataccctcattttaatccataaataaattcctattttcttgcacaca 16237107  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttca 307  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||||| | ||||| ||||||| ||||||||||    
T  16237108 ctttatctctccaataaatttaaaatgttatttttctctcgtaacaaacaactgtcagttattatctttttcttca 16237183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 133 - 318
Target Start/End: Complemental strand, 45668042 - 45667852
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttc----ctattataccctcattttaatccaccattaaattcttatttt-ttgca 227  Q
    ||||||| ||||  ||||||||||||||||||||| ||| || | ||     |||||||||| |||||||||||||||| |||||||||||||| |||||    
T  45668042 agaaaatcaacacaaaaatagcgatgtgtatttttgcacttttttttttcttctattataccttcattttaatccaccaataaattcttattttcttgca 45667943  T
Q  228 cacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    |||||||||||||| |||||||||||||||||||| |||||  |||||||||| ||||||| ||||||||||||||| || ||||||||||    
T  45667942 cacactttatcttttcaataaatttaatatgttatctttcttccgtaacaaacaattgtcagttattatatttttctccaacaaattccta 45667852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 311
Target Start/End: Complemental strand, 2094369 - 2094192
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacact 233  Q
    |||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| |||  |||||||||||| ||||||  |||||||| | |||||||    
T  2094369 aaaattaacaccaaaatagtgatgtgtatttttgcacattttcttcctattatactctcggtttaatccaccaataaatttctatttttttggacacact 2094270  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaa 311  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||||  ||||||| ||||||| ||||||| ||||||    
T  2094269 ttatcttttcaaaaaatttaatatgttatctttctctcgtaacaaataattgtcagttattatctttttctccagcaa 2094192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 27818042 - 27817797
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    ||||||||||||  |||||| ||||||| |||||| ||| || | ||||||||||||||| |||||||||||||| ||||||| || |||||||||||||    
T  27818042 agaaaattaacacaaaaataacgatgtgcatttttgcacattttattcctattatacccttattttaatccaccaataaattcctatttttttgcacaca 27817943  T
Q  232 ctttatctttccaataaatt-----taatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnng 326  Q
     ||||||||| |||||||||     ||||||||||| ||||| | ||||||||| ||| ||| ||||||  ||||||| || |||||| |||       |    
T  27817942 ttttatcttttcaataaatttaatataatatgttatctttcttttgtaacaaacaattatcagttattaactttttctccaacaaatttctatttttttg 27817843  T
Q  327 cacactctctc--tcataacaaacaattgttaattttctaaatatt 370  Q
    | |||||||||  ||||||||||||||||| |||||||||||||||    
T  27817842 cgcactctctctatcataacaaacaattgtcaattttctaaatatt 27817797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 302
Target Start/End: Complemental strand, 5494223 - 5494055
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||| |  ||||||| ||||||||||||| ||| || ||||||||||||| |||||||| | ||||||| ||||||| | |||||| | |||||    
T  5494223 agaaaattaatacaaaaatagtgatgtgtatttttgcacattttcttcctattatatcctcattt-actccaccaataaattcctttttttttctcacac 5494125  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatattttt 302  Q
    |||||||||  ||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||| |||||    
T  5494124 tttatctttataataaatttaatatgttatctttttctcgtaacaaacaattgtcacttattattttttt 5494055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 38750473 - 38750618
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||  ||| |||||||| | |||||||||| ||| || |||||||||||||| |||| |||||||||||| || ||  |||||||| ||||||||    
T  38750473 agaaaattttcatgaaaatagcaaagtgtatttttgcacattttcttcctattatactctcaatttaatccaccaatatatctttatttttggcacacac 38750572  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    ||||||||||||||||||||||||||||||| || |||||||||||    
T  38750573 tttatctttccaataaatttaatatgttataattttctcgtaacaa 38750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 133 - 280
Target Start/End: Complemental strand, 9589363 - 9589212
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaa----ttcttattttttgcac 228  Q
    |||| ||||||| ||||||||| | |||||||||| ||| || |||||||||| ||||||||||||||||||||| || |    ||||| ||||||||||    
T  9589363 agaatattaacaccaaaatagcaaagtgtatttttgcactttttcttcctattgtaccctcattttaatccaccaatatataccttctttttttttgcac 9589264  T
Q  229 acactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    | ||||| ||||| |||||||||||||||||||| ||| ||| |||||||||    
T  9589263 aaactttctcttttcaataaatttaatatgttatttttatcttgtaacaaac 9589212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 318
Target Start/End: Complemental strand, 34669281 - 34669095
Alignment:
Q  134 gaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttc-ctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    |||||||||||| ||||||||||||||||||||| ||| || | ||  ||||||||| |||||||||||||| || ||||||  || ||||||||| |||    
T  34669281 gaaaattaacattaaaatagcgatgtgtatttttgcacatttttttttctattatactctcattttaatccatcaataaatttctacttttttgcagaca 34669182  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    |||||| ||| |||||||||||||||| ||| ||||| | |||||| ||  |||||||||||||| |||| |  || ||||||||||    
T  34669181 ctttattttttcaataaatttaatatgatatctttcttttgtaacagacagttgtcaattattatcttttacaccaacaaattccta 34669095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 318
Target Start/End: Complemental strand, 6749518 - 6749359
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttc-caataaatttaatat 257  Q
    ||||||||||||| || |||| ||||||||||||| ||||||| ||||| |||||||||||||||||| |||| |||  ||||| |||||||||||||||    
T  6749518 tgtatttttacacattttctttctattataccctcgttttaatgcaccaataaattcttattttttgcgcaca-ttttcctttctcaataaatttaatat 6749420  T
Q  258 gttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    ||||| ||||||| ||||||||| ||| | | ||| ||| | ||||| || ||||||||||    
T  6749419 gttatttttctcttgtaacaaacaatttttagttactatctctttctccaacaaattccta 6749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 37030386 - 37030526
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtattttta-cacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacac 230  Q
    ||||||||||||  |||||  ||| ||||||||||  ||| || |||||||| ||||||||||||||||||||| | ||||||   ||| ||||||| ||    
T  37030386 agaaaattaacacaaaaatcacgaagtgtattttttgcacattttcttcctagtataccctcattttaatccactaataaatttcaattgttttgcaaac 37030485  T
Q  231 actttatctttccaataaatttaatatgttatatttctctc 271  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37030486 actttatctttccaataaatttaatatgttatatttctctc 37030526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 633076 - 633193
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    |||||||||| ||| || |||| | ||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||   |||| ||||||||||||||    
T  633076 gtgtatttttccacattttctttcaattatactctcattttaatccaccaataaattcttacttttttcacacacttttcttttctaataaatttaatat 633175  T
Q  258 gttatatttctctcgtaa 275  Q
    ||||| ||||||||||||    
T  633176 gttatctttctctcgtaa 633193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 21933922 - 21934065
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||  ||| |||||||| | |||||||||| ||| || |||| | |||||||||||| |||||||||| | || ||   |||||||||  |||||    
T  21933922 agaaaattttcatgaaaatagcaaagtgtatttttgcacattttcttacgattataccctcaatttaatccactaatatatctctattttttgg-cacac 21934020  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  21934021 tttatctttccaataaatttaatatgttatatttttctcgtaaca 21934065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 376310 - 376168
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacacttta 236  Q
    |||||||  |||||||||| ||||||||||  |  || ||||||| ||||||| ||||||||||||| || || ||| ||||||||| |||||||||||     
T  376310 attaacacaaaaatagcgaagtgtattttttaatcttttcttcctgttatacc-tcattttaatccatcaatatatttttatttttttgcacacactttc 376212  T
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||    
T  376211 tctttccaacaaatttaatatgttatctttctctggtaacaaac 376168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 297053 - 296817
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccatta-aattcttattttttgcacaca 231  Q
    |||| ||||||| ||||||||||| ||||||||||  || || |||||||| |||||||||||||||  |||||| || | ||||  |||||||||||||    
T  297053 agaatattaacaccaaaatagcgaagtgtatttttgtacattttcttcctactataccctcattttataccaccaatatatttctatttttttgcacaca 296954  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacac 331  Q
    |||| ||||| |||| ||||||||| | ||| |||| ||| ||||||||  |||| | ||| ||| |||||   || |||||||||        | |||     
T  296953 ctttctcttttcaattaatttaatacggtatctttcgctcataacaaacatttgttagttactatcttttttaccaacaaattcctttttttttgtaca- 296855  T
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
     |||||||||||||||||||||| |||||||||||||||    
T  296854 -ctctctcataacaaacaattgtcaattttctaaatatt 296817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 290
Target Start/End: Complemental strand, 27264399 - 27264245
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattt-tttgcacacact 233  Q
    |||||||||| |||| ||||| ||| |||||||  |  || ||||||||||||| ||| |||||||||||||| ||||||| ||||| ||||||||||||    
T  27264399 aaaattaacaccaaattagcgttgtttatttttgtatattttcttcctattatatcctaattttaatccaccaataaattcctatttatttgcacacact 27264300  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaat 290  Q
     |||||||||||||||| ||  ||||| | ||||| ||||||||||  |||||||||    
T  27264299 atatctttccaataaatcta--atgttttctttctatcgtaacaaataattgtcaat 27264245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 1405462 - 1405329
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaatt-cttattttttg----cacacactttatctttccaataaattt 252  Q
    |||||||||| ||| ||  |||||||||||||||| |||||||||||| | |||||| ||| ||||||     |||||||| | ||||||||||||||||    
T  1405462 gtgtatttttgcacttttacttcctattatacccttattttaatccactaataaattgctttttttttttcttcacacactatctctttccaataaattt 1405363  T
Q  253 aatatgttatatttctctcgtaacaaacgattgt 286  Q
    |||||||||| ||||||||||||||||| |||||    
T  1405362 aatatgttatctttctctcgtaacaaacaattgt 1405329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 19229319 - 19229423
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    ||||| |||||||||||||||||||||||| | || |  | ||||||||||||| ||||| |||||||||||||||||||||||||| |||||||  |||    
T  19229319 tcttcttattataccctcattttaatccactaatatacacctattttttgcacagactttctctttccaataaatttaatatgttatttttctctgataa 19229418  T
Q  276 caaac 280  Q
    |||||    
T  19229419 caaac 19229423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 176 - 302
Target Start/End: Original strand, 45759121 - 45759248
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgta 274  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||||||||  |||||||||||| ||| | |||||||||||||||||| ||||||| ||     
T  45759121 tcttcctattataccctcaatttaatccaccaataaattactatttttttacacacactttattttttccataaatttaatatgttatctttctcttgtg 45759220  T
Q  275 acaaacgattgtcaattattatattttt 302  Q
    || ||| ||||||  ||||||| |||||    
T  45759221 acgaacaattgtcggttattatcttttt 45759248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 34823614 - 34823752
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||| ||||||| |||| |||||| ||||||||||  |  || ||||||||| |||||||| ||||||||||||  || ||||||||||||| | |||||    
T  34823614 agaatattaacaccaaattagcgaagtgtatttttgtatattttcttcctatcataccctcgttttaatccaccgatatattcttatttttttcgcacac 34823713  T
Q  233 tttatctttccaataaatttaatatgttatatttctctc 271  Q
    | | | ||||||||||||| |||||||||| ||||||||    
T  34823714 tatctttttccaataaattcaatatgttatttttctctc 34823752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 21916112 - 21916016
Alignment:
Q  185 tataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||| ||| ||||| |||||| || |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  21916112 tataccttcaatttaacccaccaatatattcctattttttgacacacactttatctttccaataaatttaatattttatatttttcttgtaacaaac 21916016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 6472283 - 6472402
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttc-caataaatttaatat 257  Q
    ||||||||||||| || | || ||||||||||||| ||||||||||||| |||||||||||||||||| |||| |||  ||||| |||||||||||  ||    
T  6472283 tgtatttttacacattttttttctattataccctcgttttaatccaccaataaattcttattttttgcgcaca-ttttcctttctcaataaattta--at 6472379  T
Q  258 gttatatttctctcgtaacaaac 280  Q
    ||||| ||||||| |||||||||    
T  6472380 gttatttttctcttgtaacaaac 6472402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 7259363 - 7259445
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||||||| | ||| || ||||||||| |||| |||||||||||||||||||| |||||||||    
T  7259363 ttcctattataccctcattttaatccactaataattttttatttttttgcacccactttatctttccaataaaattaatatgt 7259445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 13779227 - 13779145
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| || | ||| ||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  13779227 ttcctattataccctcattttaatctactaataatttcctatttttttgcacaccctttatctttccaataaatttaatatgt 13779145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 280
Target Start/End: Original strand, 42735057 - 42735183
Alignment:
Q  154 cgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaattt 252  Q
    ||||||||||||||  || || || | |||||||| ||| ||||||||||| || ||||||| |||||||| ||| |||||||||||||   ||||||||    
T  42735057 cgatgtgtatttttgtacattttcgttctattatatcct-attttaatccatcaataaattcctatttttttgcatacactttatctttttgataaattt 42735155  T
Q  253 aatatgttatatttctctcgtaacaaac 280  Q
    |||||||||| ||| |||||||||||||    
T  42735156 aatatgttatttttttctcgtaacaaac 42735183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 21959385 - 21959467
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattctta-ttttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||||||| | ||| ||| || ||||||||||||||||||| |||| ||||||| ||||||||    
T  21959385 ttcctattataccctcattttaatccactaataatttcctatttttttgcacacactttatatttctaataaatataatatgt 21959467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 21934134 - 21934178
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21934134 gcacactctctctcataacaaacaattgttaattttctaaatatt 21934178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 25841507 - 25841603
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaata 256  Q
    |||||||||| ||| || | || ||||||||||||||||||||| ||| | ||| ||| ||||||||  ||||| ||||||||||||||||||||||||    
T  25841507 gtgtatttttgcacattttttttctattataccctcattttaattcactaataatttcctatttttt--acacattttatctttccaataaatttaata 25841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 315
Target Start/End: Original strand, 22722248 - 22722346
Alignment:
Q  217 tattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||  ||||||| ||||  || ||||| | ||| | | |||||||||| |||||||    
T  22722248 tattttttgcacacactttttctttccaataaatttaatgtgttatcattctctcataacttacaattgttagttactctctttttcttcaacaaattc 22722346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 19578588 - 19578498
Alignment:
Q  188 accctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||||| || ||||||| |||||||| ||||   ||| | ||||||||||||| |||||||||| ||||||| |||||||||    
T  19578588 accctcattttaatccaacaataaattcctatttttttcacaa--tttctatttccaataaattcaatatgttatctttctcttgtaacaaac 19578498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 1272739 - 1272678
Alignment:
Q  219 ttttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||  | |||||||||||||||||||||||||| |||| || |||||||||    
T  1272739 ttttttgcacacaccctctctttccaataaatttaatatgttatttttcgctggtaacaaac 1272678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 37030581 - 37030618
Alignment:
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||||||||||||    
T  37030581 ctctctcataacaaacaattgtcaattttctaaatatt 37030618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 45759279 - 45759317
Alignment:
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  45759279 tctctcccataacaaacaattgttaattttttaaatatt 45759317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 388872 - 388980
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    ||||||||||||  |||||||||||||| | ||| ||  |||||||    ||||| || |||||| ||||||||| |  |||||| ||||||| ||||||    
T  388872 ttcctattatactatcattttaatccactagtaagtttctatttttgttgcacacattctctttctaataaatttgacgtgttatctttctcttgtaaca 388971  T
Q  278 aacgattgt 286  Q
    ||| |||||    
T  388972 aacaattgt 388980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 7259512 - 7259548
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  7259512 tctctcataacaaacaattttcaattttctaaatatt 7259548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 12568871 - 12568835
Alignment:
Q  244 aataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||||| |||||||| |||||||||||||    
T  12568871 aataaatttaatatattatatttatctcgtaacaaac 12568835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 13545335 - 13545299
Alignment:
Q  244 aataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||||| |||||||| |||||||||||||    
T  13545335 aataaatttaatatattatatttatctcgtaacaaac 13545299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 25841674 - 25841706
Alignment:
Q  338 tcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||| |||||||||||||||||    
T  25841674 tcataacaaacaatttttaattttctaaatatt 25841706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 53940151 - 53940119
Alignment:
Q  192 tcattttaatccaccattaaattcttatttttt 224  Q
    |||||||||||||||| ||||||||||||||||    
T  53940151 tcattttaatccaccaataaattcttatttttt 53940119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 135 - 370
Target Start/End: Original strand, 8544148 - 8544383
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctt-attttttgcacacact 233  Q
    |||||||||| |||| || | |||||||||||| ||| || ||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||||     
T  8544148 aaaattaacaccaaattaacaatgtgtatttttgcacattttcttcatattataccctcattttaatccaccaataaattcctgattttttgcacacacc 8544247  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactc 333  Q
    |||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||| || |||||||| |       || |||||    
T  8544248 ttatatttccaataaatttaatatgttatctttctctcgtaagaaacaattgtcaattattatctttttctccaacaaattcc-atttttttgcccactc 8544346  T
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  8544347 tctctcatatcaaacaattgtcaattttctaaatatt 8544383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 133 - 293
Target Start/End: Original strand, 17201895 - 17202056
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    ||||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||| || |||||| |||| |    
T  17201895 agaaaattaacataaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcctatttttttacacaaa 17201994  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattat 293  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  17201995 ctttatctttccaataaatttaatatgttatttttctctcgtaacaaacgattgtcagttat 17202056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 12436153 - 12436392
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||||||  ||||||||||||| ||| || ||||| |||||||| ||||||||||||||||| ||||||| ||||||||  ||||||    
T  12436153 agaaaattaacaccaaaataatgatgtgtatttttgcacattttcttcatattatacactcattttaatccaccaataaattcatatttttttaacacac 12436252  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    ||||| ||| ||||| |||||||||||||| ||||||| ||||||||| ||||||  ||||||| |||||||||| ||||||||||       || ||||    
T  12436253 tttattttttcaatatatttaatatgttatctttctctggtaacaaactattgtcggttattatctttttcttcaacaaattcctatttgtttgcgcact 12436352  T
Q  333 c--tctctcataacaaacaattgttaattttctaaatatt 370  Q
    |  ||||||| ||||||||||| | |||||||||||||||    
T  12436353 ctttctctcaaaacaaacaattatcaattttctaaatatt 12436392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 6428688 - 6428534
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    |||||||||||| |||||||| ||||||||||||| ||| || |||| |||||||||| |||||||||||||||| ||| ||| |||||||| |||||||    
T  6428688 agaaaattaacaccaaaatagtgatgtgtatttttgcacattttctttctattataccttcattttaatccaccaataagttcctatttttttgcacaca 6428589  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6428588 ctttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgt 6428534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 314
Target Start/End: Complemental strand, 32474775 - 32474594
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    ||||||||| ||||||||||||||| ||||||||| ||| || |||| |||||||||||||||||||||||| || ||||||| |||||||| ||| |||    
T  32474775 agaaaattaccatcaaaatagcgatttgtatttttgcacattttctttctattataccctcattttaatccaacaataaattcatattttttcgcaaaca 32474676  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||| ||||||| ||||||| |||||||||| ||||||    
T  32474675 ctttatctttccaataaatttaatatgttatcttt-tatcgtaataaacaattgtcagttattatctttttcttcaacaaatt 32474594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 19804363 - 19804121
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    ||||||||||||  ||| |||| ||||||||||||  || || |||||||||| |||||||||||||||| || | |||||||||||||||| | |||||    
T  19804363 agaaaattaacactaaattagcaatgtgtatttttgtacattttcttcctattctaccctcattttaatcgacaaataaattcttatttttttgtacaca 19804264  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnng----c 327  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||  |||||||  |||||| ||||||| || ||||||||||       |    |    
T  19804263 ctttatctttccaacaaatttaatatgttatatttctctggtaacaaataattgtcagctattatctttttctccaacaaattcctatttttttgcgctc 19804164  T
Q  328 acactctctctcataacaaacaattgttaattttctaaatatt 370  Q
     | ||||||||||| |||||||||||| |||||||||||||||    
T  19804163 tctctctctctcattacaaacaattgtcaattttctaaatatt 19804121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 368
Target Start/End: Original strand, 11991712 - 11991933
Alignment:
Q  148 aaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaat 246  Q
    |||||||||||||||||||| ||| || |||||||| |||||| ||||||||||| ||||  |||||| | |||| ||||||| ||||||| |||| |||    
T  11991712 aaatagcgatgtgtatttttgcacattttcttcctaatataccttcattttaatctaccaaaaaattcatgtttttttgcacaaactttatatttctaat 11991811  T
Q  247 aaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctcataacaa 346  Q
    |||||||||||||||| ||||||| ||||||||| |||||||  |||||| |||| |||||  ||||||| |        ||| ||||||||||||||||    
T  11991812 aaatttaatatgttatctttctcttgtaacaaacaattgtcagatattatcttttacttcaaaaaattccaatttttttacacgctctctctcataacaa 11991911  T
Q  347 acaattgttaattttctaaata 368  Q
    |||||||| ||||| |||||||    
T  11991912 acaattgtcaatttcctaaata 11991933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 291
Target Start/End: Complemental strand, 28620635 - 28620492
Alignment:
Q  148 aaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaat 246  Q
    ||||| |||||||||||||| ||| || |||||||||||||||||||||||||||| |||| || ||| |||||||| |||||||| |||||||| ||||    
T  28620635 aaataacgatgtgtatttttgcaccttttcttcctattataccctcattttaatccgccat-aagttcctatttttttgcacacaccttatcttttcaat 28620537  T
Q  247 aaatttaatatgttatatttctctcgtaacaaacgattgtcaatt 291  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  28620536 aaatttaataagttatatttctctcgtaacaaacaattgtcaatt 28620492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 147 - 304
Target Start/End: Original strand, 42673502 - 42673659
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaat 246  Q
    ||||||||||||| ||||||| ||| || | | | | |||||||||  ||||||||||||| |||||||||||||||||||||||||||||| ||| |||    
T  42673502 aaaatagcgatgtatatttttgcacattgtatccttgttatacccttgttttaatccaccaataaattcttattttttgcacacactttatcattctaat 42673601  T
Q  247 aaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttct 304  Q
    ||||||||||||||||||||||||| |||||||  ||||||  ||||||| |||||||    
T  42673602 aaatttaatatgttatatttctctcataacaaataattgtcggttattatctttttct 42673659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 178 - 370
Target Start/End: Original strand, 18412830 - 18413023
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttcc-aataaatttaatatgttatatttctctcgtaac 276  Q
    ||||||||||||| | |||||||||||||| |||||| |||||||||||||| ||||||| |||   |||||||||||||| |||| |||||||||||||    
T  18412830 ttcctattatacctttattttaatccaccaataaatttttattttttgcacatactttattttttttaataaatttaatatattatctttctctcgtaac 18412929  T
Q  277 aaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||| ||||||| ||||||| |||||||| |  |||||| ||       || | |||||| ||||||||||||||||| |||||||||||||||    
T  18412930 aaacaattgtcagttattatctttttctttaaaaaattcttatttttttgcgcgctctctttcataacaaacaattgtcaattttctaaatatt 18413023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 39940181 - 39940309
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||||| |||| |||||||| |||    
T  39940181 tcttcctattataccctcattttaatccaccaataaattcctatttttttcacacacttgatctttccaataaatttaatattttatttttctctcataa 39940280  T
Q  276 caaacgattgtcaattattatatttttct 304  Q
    ||||| ||||||  ||||||  |||||||    
T  39940281 caaactattgtccgttattaactttttct 39940309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 370
Target Start/End: Complemental strand, 1584114 - 1583874
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcatt---ttaatccaccattaaattctta-ttttttgcacac 230  Q
    ||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||  ||||   ||||||||||| ||||||| || ||||||||||||    
T  1584114 aaaataaacatcaaattagcgatgtgtatttttgcacattttcttcctattataccaccatttaattaatccaccaataaattcctatttttttgcacac 1584015  T
Q  231 actttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcaca 330  Q
    |||||||||||| ||||||||| ||| ||| |||||||||| |||||||| ||||||  ||||||| ||||||| ||  |||||||||       || |     
T  1584014 actttatctttctaataaatttcata-gttgtatttctctcataacaaacaattgtccgttattatctttttctccaataaattcctatttttttgcgcg 1583916  T
Q  331 ct--ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||  |||||||||||||||||||||| ||||||  |||||||    
T  1583915 ctcgctctctcataacaaacaattgtcaatttttgaaatatt 1583874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 280
Target Start/End: Complemental strand, 1584301 - 1584159
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttt-tgcacacact 233  Q
    |||||||||| |||| ||||||||||||||||| ||| || |||| ||||||||||||||||||||||||||  ||||||  ||||||| ||||||||||    
T  1584301 aaaattaacaccaaattagcgatgtgtatttttgcacattttctttctattataccctcattttaatccaccgataaatttctatttttctgcacacact 1584202  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||    
T  1584201 ttatctttccaataaatttaatacgt----tttctctcgtaacaaac 1584159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 36059583 - 36059695
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaat 246  Q
    ||||||| || |||||||||| ||| || | |||||||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||    
T  36059583 aaaatagtgaagtgtattttttcacatttttttcctattataccctcattttaatccactaataatttcctattttttgcacacactttatctttccaat 36059682  T
Q  247 aaatttaatatgt 259  Q
    |||||||||||||    
T  36059683 aaatttaatatgt 36059695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 139 - 318
Target Start/End: Original strand, 25612737 - 25612915
Alignment:
Q  139 ttaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatc 238  Q
    |||||| |||| ||||||||||||||||| ||| || |||||||||||||||||||||| ||||||  |   ||||| | |||||||||||| ||| |||    
T  25612737 ttaacaccaaattagcgatgtgtatttttgcacattttcttcctattataccctcattt-aatccattagataattcattttttttgcacacgcttcatc 25612835  T
Q  239 tttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    |||  ||||||||||||||||||| |||||||||||| |||| || |  | ||||||| ||||||| || ||||||||||    
T  25612836 tttagaataaatttaatatgttatctttctctcgtaagaaacaatcgctagttattatctttttctccaacaaattccta 25612915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 248913 - 249057
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||  ||| |||||||| | |||||||||||||| || ||||||||||||||||||| |||||||||| |  | ||   |||||||||  |||||    
T  248913 agaaaatttccataaaaatagcaaagtgtatttttacacattttcttcctattataccctcaatttaatccactaacatatctctattttttgg-cacac 249011  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  249012 tttatctttccaaaaaatttaatatgttatatttttctcgtaacaa 249057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 280
Target Start/End: Complemental strand, 37270165 - 37270032
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaat 246  Q
    |||||||| | |||||||||| ||| || |||||||| |||||||||| |||||||||| | || ||   |||||||||| ||||||||||| ||| |||    
T  37270165 aaaatagcaaagtgtatttttgcacattttcttcctactataccctcaatttaatccactaatatatctatattttttgctcacactttatcattctaat 37270066  T
Q  247 aaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||||||||||| |||| ||||||||    
T  37270065 aaatttaatatgttatatttttctcataacaaac 37270032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 20202274 - 20202161
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaa 245  Q
    |||||||| | |||||||||| ||| || | |||||||||||||||||||||||| ||| | ||| ||| |||||||| ||||||||||||||||| |||    
T  20202274 aaaatagctaagtgtatttttgcacatttttttcctattataccctcattttaattcactaataatttcatatttttttgcacacactttatcttttcaa 20202175  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  20202174 taaatttaatatgt 20202161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 39585370 - 39585465
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcac 228  Q
    |||||||||||| ||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||| || ||||||  | ||||||||||    
T  39585370 agaaaattaacaccaaaatagcgacgtgtatttttgcacattttcttcctattataccctcattttaatccatcaataaattacttttttttgcac 39585465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 289
Target Start/End: Original strand, 11825241 - 11825355
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgta 274  Q
    ||||||||||||||||||| | |||||||| | || |||||||||||||| |||| ||||||||||  |||||||||||||||||||| ||| |||| ||    
T  11825241 tcttcctattataccctcaatgtaatccacaaatatattcttattttttggcacatactttatcttctcaataaatttaatatgttatttttatctcata 11825340  T
Q  275 acaaacgattgtcaa 289  Q
    | |||| ||||||||    
T  11825341 aaaaacaattgtcaa 11825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 17558407 - 17558305
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaat 246  Q
    |||||||||| ||||||||||||||    | ||||||||||| |||||||||||||||| | ||| ||| ||||||||||||||||||||| ||||||||    
T  17558407 aaaatagcgaagtgtatttttacacacatttttcctattatatcctcattttaatccactaataatttcctattttttgcacacactttatatttccaat 17558308  T
Q  247 aaa 249  Q
    |||    
T  17558307 aaa 17558305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 13219871 - 13220055
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatcttt--ccaataaatttaatatgttatatttctctcgtaaca 277  Q
    |||| |||||||||||| ||||||||| || |||  |||||||| ||||||||||||| |||  ||||||||||||||||||||| ||| | || |||||    
T  13219871 ctatcataccctcattt-aatccaccaatatatttctatttttttgcacacactttatttttttccaataaatttaatatgttatctttttatcataaca 13219969  T
Q  278 aacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctcataacaaacaattgttaattttct 363  Q
    ||| ||||| |||||||||  ||||||||  ||||||| |        || |||||||||||||||||| ||||||| ||||||||    
T  13219970 aacaattgtgaattattatccttttcttcgacaaattcttttttttttgcgcactctctctcataacaagcaattgtcaattttct 13220055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 14967928 - 14967822
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    ||||||||| || |||||||||||||| ||||||  ||||||||  |||||| ||| |||||| |||||||||||| |||||| |||||||| |||||||    
T  14967928 ctattatactctaattttaatccaccaataaatttatatttttttacacacattttttctttcgaataaatttaatgtgttatttttctctcataacaaa 14967829  T
Q  280 cgattgt 286  Q
    | |||||    
T  14967828 caattgt 14967822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 16366125 - 16366043
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttat-tttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||||  | | ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  16366125 ttcctattataccctcattttaatcttctaataatttcatatatttttgcgcacactttatctttccaataaatttaatatgt 16366043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 36244539 - 36244657
Alignment:
Q  161 tatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgtt 260  Q
    ||||||| ||| || |||| ||||||||| || |||||||||||||| ||||||  |||||||||||  || |||    |||||||||||||||| ||||    
T  36244539 tatttttgcacattttctttctattatactcttattttaatccaccaataaatttctattttttgcatgcattttcctgttccaataaatttaatgtgtt 36244638  T
Q  261 atatttctctcgtaacaaa 279  Q
    || |||||||  |||||||    
T  36244639 atctttctcttataacaaa 36244657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 19133067 - 19133170
Alignment:
Q  151 tagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaat 250  Q
    |||||| |||||| ||||||| || |||| ||||||||||||||||| | | |||||||       | |||||||||||||||||  |||||||||||||    
T  19133067 tagcgaagtgtatatttacacattttctttctattataccctcattt-atttcaccatt-------ttttttttgcacacactttccctttccaataaat 19133158  T
Q  251 ttaatatgttat 262  Q
    ||||||||||||    
T  19133159 ttaatatgttat 19133170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 14655380 - 14655303
Alignment:
Q  184 ttataccctcattttaatccaccattaaattc---ttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||  | ||| |||   || |||||||||||||||||||||||||||| ||||||||||||    
T  14655380 ttataccctcattttaatccattaataatttcctttttttttttgcacacactttatctttccaat-aatttaatatgt 14655303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 17200577 - 17200502
Alignment:
Q  227 acacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatattttt 302  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||| |||||||||||  |||| ||||| ||| |||||    
T  17200577 acacactttctctttctaataaatataatatgttatctttctttcgtaacaaacatttgttaattactatcttttt 17200502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 39585469 - 39585508
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  39585469 ctctctctcataacaaacatttgttaattttctaaatatt 39585508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 368
Target Start/End: Complemental strand, 6428491 - 6428455
Alignment:
Q  332 tctctctcataacaaacaattgttaattttctaaata 368  Q
    ||||||||||||||||||||||| |||||||||||||    
T  6428491 tctctctcataacaaacaattgtcaattttctaaata 6428455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 42673690 - 42673729
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  42673690 ctctctctcataacaaacaattgtcaattttttaaatatt 42673729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 32717665 - 32717746
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||| ||||||||| | ||| ||| || |||||   |||||||||| ||||  |||||||| ||||||    
T  32717665 ttcctattataccctcatgttaatccactaataatttcctaatttttttgcacactttatttttctgataaatttgatatgt 32717746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 39615181 - 39615132
Alignment:
Q  219 ttttttgcacacactttatctttccaataaatttaatatgttatatttct 268  Q
    |||||| |||||||||| |||| | ||||||||||||||||||| |||||    
T  39615181 ttttttccacacactttctcttcctaataaatttaatatgttatttttct 39615132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 14655240 - 14655204
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  14655240 tctctcataacaaacaattttcaattttctaaatatt 14655204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 133 - 315
Target Start/End: Complemental strand, 9808220 - 9808039
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||    
T  9808220 agaaaattaacaccaaaatagcgatgtgtattttt-cacattttcttcctattatatcctcattttaatccactaataaattcctattttttgcacacac 9808122  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||| ||||||| || |||||||    
T  9808121 tttatctttctaataaatttaatatgttatctttctctcgtaacaaacaattatcagttattatctttttctccaacaaattc 9808039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 54982174 - 54982410
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattct-tattttttgcacaca 231  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| ||||||| ||||||||||||||||| || || |||| | ||||||||||| |    
T  54982174 agaaaattaacatcaaaatagtgatgtgtatttttgcacgttttctttctattatgccctcattttaatccacaataaatttctattttttttgcacata 54982273  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacac 331  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||| ||| ||| ||||||| ||||||| || ||||||||||         || |    
T  54982274 ctttatctttccaataaattcaataagttatatttctcacgtaacaaacaattatcagttattatctttttctccaacaaattcctattttttt--acgc 54982371  T
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  54982372 tctctctcataccaaacaattgttaattttctaaatatt 54982410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 292
Target Start/End: Original strand, 24073351 - 24073511
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattt-tttgcacaca 231  Q
    |||||||||||| ||||||||| | |||||||||| ||| || |||||||| ||||| ||| ||||||||||||| ||||||  ||||| ||||||||||    
T  24073351 agaaaattaacaccaaaatagcaaagtgtatttttgcacattttcttcctaatatactctcgttttaatccaccaataaatttctatttctttgcacaca 24073450  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatta 292  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24073451 ctttatcttttcaataaatttaatatgttatatttctctcgtaacaaacaattgtcaatta 24073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 133 - 286
Target Start/End: Complemental strand, 17331020 - 17330867
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| ||||||||| |||||||||||| ||| || ||||||||||||||||| |||||||| || || ||||||| |||||||| |||||||    
T  17331020 agaaaattaacaccaaaatagcaatgtgtatttttgcacattttcttcctattataccctaattttaatgcatcaataaattcctatttttttcacacac 17330921  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  17330920 tttatctttccaataaatttaatatattatttttctctcgaaacaaacaattgt 17330867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 133 - 368
Target Start/End: Original strand, 49299338 - 49299576
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttccta-ttataccctcattttaatccaccattaaattcttatttttt-gcacac 230  Q
    ||||||||||||  ||||||||||||||||||||| ||| || | |||| | ||||||||||||||||||||| || ||||||  |||||||| |||| |    
T  49299338 agaaaattaacacaaaaatagcgatgtgtatttttgcacttttttttcccaattataccctcattttaatccatcaataaattactatttttttgcactc 49299437  T
Q  231 actttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcc-tannnnnnngcac 329  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||| ||||| |  | |||||||| |        ||||    
T  49299438 actttatttttccaataaatttaatatgttatctttcactcgtaacaaacaattgtcagttattatctttttatctaacaaattccttttttttttgcac 49299537  T
Q  330 actctctctcataacaaacaattgttaattttctaaata 368  Q
     ||||||| ||||||||||||||||||||||||||||||    
T  49299538 tctctctcacataacaaacaattgttaattttctaaata 49299576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 370
Target Start/End: Original strand, 47943980 - 47944205
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactt 234  Q
    |||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||| |||||    |||||||||    
T  47943980 aaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcctattt----cacacactt 47944075  T
Q  235 tatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactct 334  Q
    |||||||| ||||||||||||||||||| ||| |||||||  ||        |||||||||| |||||||||| || |||||||       || | ||||    
T  47944076 tatctttctaataaatttaatatgttatgtttatctcgtataaa--------caattattatctttttcttcaacacattcctatttttttgcgcgctct 47944167  T
Q  335 ctc--tcataacaaacaattgttaattttctaaatatt 370  Q
    |||  ||||||||||||||||| |||||| ||||||||    
T  47944168 ctctatcataacaaacaattgtcaattttttaaatatt 47944205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 286
Target Start/End: Complemental strand, 50721535 - 50721384
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactt 234  Q
    |||||||||| ||||||||| |||| |||||||  || || ||||||||||||||||| |||| |||| |||| |||||| ||| |||||||||||||||    
T  50721535 aaaattaacaccaaaatagcaatgtatatttttgtacattttcttcctattatacccttatttcaatctaccaataaatttttagtttttgcacacactt 50721436  T
Q  235 tatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  50721435 tatctttccactaaatttaatatgttatctttctctcgtaacaaacaattgt 50721384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 139 - 370
Target Start/End: Original strand, 38839921 - 38840153
Alignment:
Q  139 ttaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatc 238  Q
    |||||| ||||| |||||||| ||||||| ||| || |||| |||||||||| | |||||||||||||| ||||||  |||||||||||||||| |||||    
T  38839921 ttaacaccaaaacagcgatgtatatttttgcacattttctttctattatacc-taattttaatccaccaataaatttctattttttgcacacaccttatc 38840019  T
Q  239 tttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacac--tctct 336  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||| | ||||| ||||||| |||||||  | ||||||||||       || |||  |||||    
T  38840020 tttccaataaatttaatatattatctttttcttgtaacaaacaaatgtcagttattatctttttctcaaacaaattcctatttttttgcgcactttctct 38840119  T
Q  337 ctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||| |||||||||| ||||| |||||||||    
T  38840120 ctcataagaaacaattgtcaatttcctaaatatt 38840153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 135 - 314
Target Start/End: Complemental strand, 45666907 - 45666729
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacacact 233  Q
    |||||| ||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  45666907 aaaattcacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcctatttttttgcacacact 45666808  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    |||||||| ||||||| |||| ||||  ||| ||||| ||||||||| ||||| | || |||| ||||||| || ||||||    
T  45666807 ttatcttttcaataaaattaacatgt--tatctctcttgtaacaaacaattgttagttgttatctttttctccaacaaatt 45666729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 37209562 - 37209725
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacaca 231  Q
    ||||||||| || ||||||||||||||||||||||  || || ||||||||| |||| || |||||||||| ||| |||||||||||| |||||||||||    
T  37209562 agaaaattaccaccaaaatagcgatgtgtatttttgtacattttcttcctatcatactcttattttaatccgccaataaattcttattcttttgcacaca 37209661  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattata 297  Q
    |||||||||| |||||||||||||||||  || || ||||| ||||||| ||||||||||||||||    
T  37209662 ctttatcttttcaataaatttaatatgt--tacttttctcggaacaaacaattgtcaattattata 37209725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 135 - 269
Target Start/End: Original strand, 1821091 - 1821224
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccat---taaattcttattttttgcacaca 231  Q
    |||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    ||||||| |||||    ||||||    
T  1821091 aaaattaacaccaaaatagcgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaccaataaattcgtattt----cacaca 1821186  T
Q  232 ctttatctttccaataaatttaatatgttatatttctc 269  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  1821187 ctttatctttccaataaatttaatatgttatgtttctc 1821224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 19443064 - 19443292
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||| | ||| ||| |||||| ||||||| ||| || |||||||||||||||||||||||||||||||| ||||||  |||||     |||||     
T  19443064 agaaaattaataccaagataacgatgtatatttttgcacattttcttcctattataccctcattttaatccaccaataaatttctattt----aacacat 19443159  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc--ctannnnnnngcaca 330  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||       |||||||||| ||||||| || |||||||  ||        || |     
T  19443160 tttatctttccaataaatttaatatgttatgtttctttcgtaacaaa-------caattattatctttttctccaacaaattcttctttttttgcgctct 19443252  T
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  19443253 ctctctctcataacaaacaattgtcaattttctaaatatt 19443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 133 - 286
Target Start/End: Original strand, 34031486 - 34031642
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc----ttattttttgcac 228  Q
    |||||||||| | |||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||||    || ||||||||||    
T  34031486 agaaaattaagaccaaaatagtgatgtgtatttttgcacattttcttcctattataccctcattttaatccaccaataaattcaatttttttttttgcac 34031585  T
Q  229 acactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    ||||||||||||| ||  |||||||| ||||||| ||| ||||||||||||| |||||    
T  34031586 acactttatcttttcaggaaatttaacatgttatcttt-tctcgtaacaaacaattgt 34031642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 133 - 301
Target Start/End: Complemental strand, 53393974 - 53393805
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacaca 231  Q
    ||||||||||||  ||| |||||| |||||||||| ||| || ||||| |||| ||| || ||||||||||||| |||||||| |||| |||||||||||    
T  53393974 agaaaattaacacaaaactagcgaggtgtatttttgcacattttcttcatattctactcttattttaatccacctttaaattcctattattttgcacaca 53393875  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttt 301  Q
    |||||||| | |||||| ||||||||||||||||| ||| |||| |||| ||||||| ||||||| ||||    
T  53393874 ctttatctattcaataattttaatatgttatatttttcttgtaataaacaattgtcagttattatctttt 53393805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 49263672 - 49263525
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc---ttattttttgcaca 229  Q
    |||||||||||| ||||||||||| |||||||||| ||| || ||||||||||| ||||| |||||||||||| | |||||||   || |||||  ||||    
T  49263672 agaaaattaacaccaaaatagcgaagtgtatttttgcacattttcttcctattagaccctgattttaatccactaataaattccttttttttttctcaca 49263573  T
Q  230 cactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    || |||||||||||||||||||||  ||||||| ||||||||||||||||    
T  49263572 cattttatctttccaataaattta--atgttatttttctctcgtaacaaa 49263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 9088763 - 9088884
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc-ttattttttgcacaca 231  Q
    |||| |||||||  |||||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||  |||||| || |||||||||||||    
T  9088763 agaacattaacactaaaatagcgatgtgtattcttgcacattttcttcctattataccctcattttaatccaccaaaaaattcttttttttttgcacaca 9088862  T
Q  232 ctttatctttccaataaattta 253  Q
    ||| || |||||||||||||||    
T  9088863 cttcatttttccaataaattta 9088884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 38433904 - 38433985
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  38433904 ttcctattataccctcattttaatccactaataatttcctattttttgcacacactttatctttccaataaatttaatatgt 38433985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 266
Target Start/End: Complemental strand, 41503150 - 41503030
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaa 245  Q
    |||||||| | |||||||||| ||| || ||||||||||||||||||| |||||||||||| || |||  ||| ||||| ||||||||||||||||| ||    
T  41503150 aaaatagcaaagtgtatttttgcacattttcttcctattataccctcaatttaatccaccaatatatttatatattttggcacacactttatctttctaa 41503051  T
Q  246 taaatttaatatgttatattt 266  Q
    |||||||||||||||||||||    
T  41503050 taaatttaatatgttatattt 41503030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 255
Target Start/End: Original strand, 46430421 - 46430542
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacact 233  Q
    |||||||||| ||||||| ||||||||||||||  |  || ||||||||||| || |||||||||||| |||| ||||||  |||||||| |||||||||    
T  46430421 aaaattaacaccaaaataacgatgtgtatttttgaatattttcttcctattacactctcattttaatctaccaataaatttctattttttagcacacact 46430520  T
Q  234 ttatctttccaataaatttaat 255  Q
    ||||||||||||||||||||||    
T  46430521 ttatctttccaataaatttaat 46430542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 363
Target Start/End: Complemental strand, 6949619 - 6949400
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||| || ||||||||||||||  || || |||||||||||||| |||  |||||||||||| |||||||             ||||    
T  6949619 agaaaattaacaccaaattaacgatgtgtatttttgtacattttcttcctattatacactctctttaatccaccaataaattc-------------acac 6949533  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngca--ca 330  Q
    |||||||||||||||||||||||||||||| ||||  || |||||||| ||||||  |||| || ||||||| || ||||||| ||       |||  |     
T  6949532 tttatctttccaataaatttaatatgttatctttcgttcataacaaacaattgtcggttataatctttttctccaacaaattcatatttttttgcacgct 6949433  T
Q  331 ctctctctcataacaaacaattgttaattttct 363  Q
    ||||||||||| |||||||||||| ||||||||    
T  6949432 ctctctctcatgacaaacaattgtcaattttct 6949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 20782995 - 20782898
Alignment:
Q  184 ttataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||||||||||||||| |||| || ||||||| | |||||| ||| ||||| |||||||||||||||||||||| ||||||  |||||||    
T  20782995 ttataccctcattttaatccaccaataaaatcatatttttctacacacattttctcttttcaataaatttaatatgttatatgtctctcaaaacaaac 20782898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 24537928 - 24538047
Alignment:
Q  139 ttaacatcaaaatagcgatgtgtatttttacacg-ttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttat 237  Q
    ||||||| |||||||||| |||||||||| |||  || | ||||||||||||  |||||| ||||||| | ||| ||| |||||||| ||||||||||||    
T  24537928 ttaacataaaaatagcgaagtgtatttttgcacactttttttcctattatact-tcattt-aatccactaataatttcctatttttttcacacactttat 24538025  T
Q  238 ctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||    
T  24538026 ctttccaataaatttaatatgt 24538047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 33890182 - 33890061
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaat-tcttattttttgcacacactttatctttccaataaatttaata 256  Q
    |||||||||||||  || ||||||||||||||||||| |||||||||||| || || |||  ||||||    ||||| |||||||||||||||||||  |    
T  33890182 gtgtatttttacatattttcttcctattataccctcaatttaatccaccaatatatctctattttttttattacactctatctttccaataaattta--a 33890085  T
Q  257 tgttatatttctctcgtaacaaac 280  Q
    |||||||||| |||||||||||||    
T  33890084 tgttatatttttctcgtaacaaac 33890061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 279
Target Start/End: Complemental strand, 2685198 - 2685076
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgc-acacactttatctttccaataaatttaata 256  Q
    |||||||||| ||| || ||||| ||||||| | ||||||||| |||||| |||||| ||||||||||| | ||||||| ||||| ||||||||||||      
T  2685198 gtgtatttttgcacattttcttcttattatatcttcattttaaaccaccaataaatttttattttttgcgatacactttctcttttcaataaatttaacg 2685099  T
Q  257 tgttatatttctctcgtaacaaa 279  Q
    |||||| |||||||  |||||||    
T  2685098 tgttatctttctcttataacaaa 2685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 53370095 - 53370216
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    |||||||||| ||| || | ||||||||||||| ||||| ||||| |||| || |||| ||  ||| ||||| | ||| ||||| |||||||||||||||    
T  53370095 gtgtatttttgcaccttttattcctattataccatcattctaatcaaccaatatattcataaattt-gcacaaattttctcttttcaataaatttaatat 53370193  T
Q  258 gttatatttctctcgtaacaaac 280  Q
    |||||||||||||||||| ||||    
T  53370194 gttatatttctctcgtaataaac 53370216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 55344137 - 55344059
Alignment:
Q  182 tattataccctcattttaatccaccattaaattcttat-tttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||| | ||| ||| ||| |||||||||||||||||||| || ||||||||||||||||    
T  55344137 tattataccctcattttaatccactaataatttcctatatttttgcacacactttatctgtctaataaatttaatatgt 55344059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 46250408 - 46250303
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||| || |||||||||||||| || |||| |||||||| |||||||||| ||||||||||||||| | ||| |||| ||| | |||||| ||||    
T  46250408 ctattatactcttattttaatccaccaatatattcatatttttttcacacactttctctttccaataaattgagtatattatctttttttcgtaagaaac 46250309  T
Q  281 gattgt 286  Q
     |||||    
T  46250308 aattgt 46250303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 366
Target Start/End: Original strand, 9089141 - 9089264
Alignment:
Q  245 ataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcac--actctctctcata 342  Q
    ||||||||||||||||||| |||||||||||||||  ||||||  ||||||| ||||||| || ||||||||||       ||||   ||||||||||||    
T  9089141 ataaatttaatatgttatagttctctcgtaacaaataattgtcggttattatctttttctccaacaaattcctacttttttgcacgttctctctctcata 9089240  T
Q  343 acaaacaattgttaattttctaaa 366  Q
    |||||||| ||| |||||| ||||    
T  9089241 acaaacaactgtcaattttttaaa 9089264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 46016435 - 46016505
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatt 251  Q
    ||||||||| || |||||||||||||| || |||| |||||||| |||||||||| |||||||||||||||    
T  46016435 ctattatactcttattttaatccaccaatatattcatatttttttcacacactttctctttccaataaatt 46016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 37371052 - 37371166
Alignment:
Q  147 aaaatagcgatgtgtattttt--acacgttatcttcctattataccctcattttaatccaccattaaatt--cttattttttgcacacactttatctttc 242  Q
    ||||||| || ||||||||||  |||| || | || |||||||||||||| |||||||||| | ||| ||   || |||||||||||||||||||||||     
T  37371052 aaaatagtgaagtgtatttttgaacactttttttttctattataccctcaatttaatccactaataatttacttttttttttgcacacactttatctttt 37371151  T
Q  243 caataaatttaatat 257  Q
    |||||||||||||||    
T  37371152 caataaatttaatat 37371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 38044266 - 38044406
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaatt----cttattttttgcacac 230  Q
    ||||||||||| |||||||| |||||||||||| ||| || ||||| |||| |||  ||||||||||| |||| ||||||     || ||||||||||||    
T  38044266 aaaattaacataaaaatagcaatgtgtatttttgcacattttcttcttattgtactttcattttaatcaaccaataaatttctattttttttttgcacac 38044365  T
Q  231 actttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||     ||||    | |||||||||||||||||||||||||||||||||    
T  38044366 ac-----cttt----ttaatttaatatgttatatttctctcgtaacaaac 38044406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 369
Target Start/End: Complemental strand, 25494306 - 25494161
Alignment:
Q  226 cacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnn 325  Q
    |||||||||||| ||| |||||||||||  ||||||| ||  |||| |||||||| ||||||| ||||||| ||||||| || ||||||||||           
T  25494306 cacacactttatattttcaataaattta--atgttatcttcatctcataacaaacaattgtcatttattatctttttctccaacaaattcctattttttt 25494209  T
Q  326 gcacactctct----ctcataacaaacaattgttaattttctaaatat 369  Q
    || | ||||||    ||| |||||||||||||| ||||||||||||||    
T  25494208 gctcgctctctctccctcttaacaaacaattgtcaattttctaaatat 25494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 22349493 - 22349401
Alignment:
Q  182 tattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    ||||||||||| ||||||||| |||| || |||  ||||| || |||||| ||| ||||| ||||||||| |||||||||| ||||||||||||    
T  22349493 tattatacccttattttaatctaccaatatatttctatttgtt-cacacattttctcttttcaataaattaaatatgttatctttctctcgtaa 22349401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 25494366 - 25494305
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctca 194  Q
    |||||||||||| |||| |||||||||| |||||| ||| || |||||||||||||||||||    
T  25494366 agaaaattaacaccaaattagcgatgtgcatttttgcacattgtcttcctattataccctca 25494305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 26625650 - 26625740
Alignment:
Q  177 cttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgttatatttctct 270  Q
    |||||||||||||| | ||||||||| |    || ||||||||||||| | ||| ||||| |||||||||||||||||||||||||| |||||||    
T  26625650 cttcctattatacctttattttaatcaa----tatattcttatttttttgtacatactttctctttccaataaatttaatatgttatctttctct 26625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 31104813 - 31104893
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaa-ttcttattttttgcacacactttatctttccaataaatttaat 255  Q
    ||||||||||||||||||||||||||| |  | |||| |||| | ||||||||||||||||  |||| |||||||||||||    
T  31104813 tcttcctattataccctcattttaatcaaggaataaatttctaactttttgcacacactttcacttttcaataaatttaat 31104893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 45634984 - 45635063
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattctta--ttttttgcacacactttatctttccaataaatttaatatg 258  Q
    ||||||||||||||||||||||||| | ||| ||| ||  ||||||||| ||| || ||||||| |||||||||||||||    
T  45634984 ctattataccctcattttaatccactactaatttcctattttttttgcaaacatttgatctttcaaataaatttaatatg 45635063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 46196581 - 46196526
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattatacc 190  Q
    |||||||||| ||||||||||| |||||||||| ||  || |||||||||||||||    
T  46196581 aaaattaacaccaaaatagcgaggtgtatttttgcatattttcttcctattatacc 46196526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 24073751 - 24073789
Alignment:
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  24073751 tctctttcataacaaacaattgtcaattttctaaatatt 24073789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Original strand, 1821278 - 1821315
Alignment:
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  1821278 ctctctcataacaaacaattgtcaattttataaatatt 1821315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 2493570 - 2493533
Alignment:
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  2493570 ctctctcataacaaacaattgtcaattttttaaatatt 2493533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 33809473 - 33809416
Alignment:
Q  185 tataccctcattttaatccaccattaaattctta-ttttttgcacacactttatcttt 241  Q
    |||||||| |||||||||||||| || ||| ||| ||||||||||||||||| |||||    
T  33809473 tatacccttattttaatccaccaatatatttttaattttttgcacacactttctcttt 33809416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 33889991 - 33889954
Alignment:
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  33889991 ctctctcataacaaacaattgtcaattttttaaatatt 33889954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 46016530 - 46016559
Alignment:
Q  332 tctctctcataacaaacaattgttaatttt 361  Q
    ||||||||||||||||||||||||||||||    
T  46016530 tctctctcataacaaacaattgttaatttt 46016559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 133 - 365
Target Start/End: Complemental strand, 41117591 - 41117355
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    |||||||||||| |||| ||||||||||||||||| ||  || | || ||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  41117591 agaaaattaacaccaaactagcgatgtgtatttttgcattttttttttctattataccctcattttaatccaccaataaatttttatttttttgcacaca 41117492  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta-nnnnnnngcaca 330  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |  |||| ||||||| |||||||||| ||||||||||         ||||    
T  41117491 ctttatctttccaataaatttaatatgttatctttctctcgtaacaaacaaacgtcacttattatctttttcttcaacaaattcctattttttttccaca 41117392  T
Q  331 c--tctctctcataacaaacaattgttaattttctaa 365  Q
    |  ||||||||||||||||||||||| ||||||||||    
T  41117391 ctttctctctcataacaaacaattgtcaattttctaa 41117355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 133 - 317
Target Start/End: Original strand, 13254164 - 13254349
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacaca 231  Q
    ||||||||||||||||||||||||||||||||||| ||| || ||||| |||||| | |||||||||||||| || ||||||| ||||||||  ||||||    
T  13254164 agaaaattaacatcaaaatagcgatgtgtatttttgcacattttcttcatattatgctctcattttaatccatcaataaattcctattttttttcacaca 13254263  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcct 317  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||| ||||||| ||  ||||||||    
T  13254264 ctatatctttccaataaatttaatatgttatttttctctcgtaacaaacaattgtcagtttttatctttttctccaaaaaattcct 13254349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 36319458 - 36319616
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    ||||||||||||  ||||||||||||||||||||| ||| || |||||||||||||| ||||||||||||||||| ||| |||  | |||||||||||||    
T  36319458 agaaaattaacacaaaaatagcgatgtgtatttttgcacattttcttcctattatactctcattttaatccacca-taagttccaatttttttgcacaca 36319556  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatt 291  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  36319557 ccttatctttccaataaatttaatatgttatatttatctcgtaacaaacaattgtcaatt 36319616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 133 - 314
Target Start/End: Original strand, 6295209 - 6295391
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacaca 231  Q
    ||||||||||||  ||||||||||||||||||||| ||| || |||| ||||||||||||||| ||| ||||||| ||||||  ||||||||  ||||||    
T  6295209 agaaaattaacactaaaatagcgatgtgtatttttgcacattttctttctattataccctcatgttactccaccaataaatttctatttttttacacaca 6295308  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
     |||||||||| || |||||||||||||||| ||||||||||||||||| ||||||  ||||||| ||||||| || ||||||    
T  6295309 ttttatctttctaaaaaatttaatatgttatctttctctcgtaacaaacaattgtcggttattatttttttctccaacaaatt 6295391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 133 - 280
Target Start/End: Complemental strand, 52415755 - 52415606
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt--gcacac 230  Q
    ||||||||| ||  |||||||| | |||||||||||||| || ||||||||||||||||||| |||||||||||| || || | ||||||||  ||||||    
T  52415755 agaaaattaccacgaaaatagcaaagtgtatttttacacattttcttcctattataccctcaatttaatccaccaatatatccctattttttcggcacac 52415656  T
Q  231 actttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  52415655 actttttctttccaataaatttaatatgttatatttttctcgtaacaaac 52415606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 133 - 276
Target Start/End: Complemental strand, 39387137 - 39386993
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    |||||||||  ||||||||||||||||||| |||| ||  || |||||||||||||  ||||||||||||||| | ||||||| || |||||||||||||    
T  39387137 agaaaattactatcaaaatagcgatgtgtacttttgcaaattttcttcctattatattctcattttaatccacgaataaattcctacttttttgcacaca 39387038  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaac 276  Q
    ||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  39387037 ctttatctttcgaataaattttatatgttatctttctcttgtaac 39386993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 23698861 - 23699008
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    ||||||||||||  ||||||  || |||||||||| ||| || |||||||||||||  |||| |||||||||||| || ||||||||||||| |||||||    
T  23698861 agaaaattaacacgaaaataatgaagtgtatttttgcacattttcttcctattataatctcaatttaatccaccaatatattcttattttttggcacaca 23698960  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    |||||||||| |||| ||||||||||||||||||| ||| ||||||||    
T  23698961 ctttatcttttcaatgaatttaatatgttatatttatcttgtaacaaa 23699008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 11795508 - 11795628
Alignment:
Q  160 gtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||| ||| || ||||| |||||||||||||||||||||||||| || |||  | ||||||||||||||||| |||||||||||||||||||||||    
T  11795508 gtatttttgcacattttcttcatattataccctcattttaatccaccaatatattacttttttttgcacacactttctctttccaataaatttaatatgt 11795607  T
Q  260 tatatttctctcgtaacaaac 280  Q
    ||||||| |||  ||||||||    
T  11795608 tatatttttcttataacaaac 11795628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 304
Target Start/End: Complemental strand, 19270275 - 19270111
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttat 237  Q
    ||||||| |||| |||||| ||||||| || ||| || |  || |||||||||||||||||||||||||| |||||| |||||||||||| | ||||| |    
T  19270275 attaacaccaaattagcgaagtgtattattgcacatttttgtcttattataccctcattttaatccaccaataaattgttattttttgcataaactttct 19270176  T
Q  238 ctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttct 304  Q
    |||||||||||||||||||  || ||| ||||||||||||||| ||||| | ||| ||| |||||||    
T  19270175 ctttccaataaatttaata--ttttatctctctcgtaacaaacaattgttagttactatctttttct 19270111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 158 - 315
Target Start/End: Complemental strand, 2752235 - 2752078
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||| ||| ||  ||||||||||||||||||| |||||| ||||||||| || |    
T  2752235 gtgtatttttgtacattttcttcctattataccctcattttaatcgaccaataagtttatattttttgcacacactttctctttcaaataaattttatgt 2752136  T
Q  258 gttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    ||| | ||||||| |||| |||| ||||| ||||| | | |||||||||| |||||||    
T  2752135 gttgtctttctcttgtaataaacaattgttaattactttctttttcttcaacaaattc 2752078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 1394959 - 1394831
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||| ||| |||||||| ||| || |||||||||| ||| || |||| |||| |||||||||||||||||||||| || |||| |||||||| | |||||    
T  1394959 agaatattcacatcaaattagtgaagtgtattttttcacattttctttctatcataccctcattttaatccaccaatatattcctatttttttcgcacac 1394860  T
Q  233 tttatctttccaataaatttaatatgtta 261  Q
    ||| | |||||||||||||||||||||||    
T  1394859 tttctttttccaataaatttaatatgtta 1394831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 280
Target Start/End: Original strand, 4395560 - 4395692
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaa 245  Q
    |||||||||| |||||||||| ||| || ||||||||||||||| |||||||||||||||| || |||| ||||||| | | |||||||| |||||||||    
T  4395560 aaaatagcgaagtgtattttttcaccttttcttcctattataccatcattttaatccaccaatatattcctatttttctacgcacactttctctttccaa 4395659  T
Q  246 taaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||  || |||| |||| ||||||||||||    
T  4395660 taaattta--attttatctttccctcgtaacaaac 4395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 10430151 - 10430273
Alignment:
Q  182 tattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacg 281  Q
    ||||||| ||| |||||||||||||| || |||| || |||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||      
T  10430151 tattatatccttattttaatccaccaatatattcctactttttgcacacactttttctttccaataaatttaatacgttatctttctctcataacaaata 10430250  T
Q  282 attgtcaattattatatttttct 304  Q
    ||||| | ||| ||| |||||||    
T  10430251 attgttagttactatctttttct 10430273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 266
Target Start/End: Complemental strand, 32769569 - 32769462
Alignment:
Q  161 tatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt--gcacacactttatctttccaataaatttaatatg 258  Q
    ||||||| ||| || ||||||||||||| ||||| |||||||||||| || ||   ||||||||  ||||||||||||||||||||||||||||||||||    
T  32769569 tattttttcacattttcttcctattatatcctcaatttaatccaccaatatatctctatttttttggcacacactttatctttccaataaatttaatatg 32769470  T
Q  259 ttatattt 266  Q
    ||||||||    
T  32769469 ttatattt 32769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 40518628 - 40518747
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    |||||||||| ||| || ||||||||||||||||||| ||||||| || | || ||   |||||||||  |||||||||| |||||||||||||||||||    
T  40518628 gtgtatttttgcacattttcttcctattataccctcaatttaatctactaatatatctctattttttgg-cacactttatatttccaataaatttaatat 40518726  T
Q  258 gttatatttctctcgtaacaa 278  Q
    ||||||||| |||||||||||    
T  40518727 gttatatttttctcgtaacaa 40518747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 304
Target Start/End: Complemental strand, 45925953 - 45925844
Alignment:
Q  196 tttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattatt 294  Q
    |||||||||||| || |||| |||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||  |||| | |||||    
T  45925953 tttaatccaccaatatattcctatttttttgcacacactttctcttttcaataaatttaatatgttatctttctctcctaacaaacatttgttagttatt 45925854  T
Q  295 atatttttct 304  Q
    || |||||||    
T  45925853 atctttttct 45925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 280
Target Start/End: Complemental strand, 4672007 - 4671873
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcac-acactttatctttccaa 245  Q
    |||||||| | |||||||||| ||  || ||||||||||||||| ||| |||||| ||||| || ||   || |||||| |  |||||||||||||||||    
T  4672007 aaaatagcaaagtgtatttttgcatattttcttcctattataccttcaatttaattcaccaatatatctctaatttttgaattacactttatctttccaa 4671908  T
Q  246 taaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||| ||||||||||| |||||||||||||    
T  4671907 taaatttaacatgttatatttttctcgtaacaaac 4671873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 31622809 - 31622922
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaa 245  Q
    |||||| ||| |||||||||| ||| || |  ||||||||| ||||||||||| ||||| | ||| ||| |||||| ||||||||||||||||||| |||    
T  31622809 aaaataacgaagtgtatttttgcacatttttctcctattattccctcattttactccactaataatttcctatttttttgcacacactttatctttacaa 31622908  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  31622909 taaatttaatatgt 31622922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 30281213 - 30281082
Alignment:
Q  143 catcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttc 242  Q
    |||||||||||| | |||||||||| ||  || ||||||||||||||||||| |||||| ||  | || ||   |||||||||  |||| |||||||||     
T  30281213 catcaaaatagcaaagtgtatttttgcatattttcttcctattataccctcaatttaattcattaatatatctctattttttgg-cacagtttatctttt 30281115  T
Q  243 caataaatttaatatgttatatttctctcgtaa 275  Q
    |||||||||||||| ||||||||| ||||||||    
T  30281114 caataaatttaataagttatatttttctcgtaa 30281082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 40518820 - 40518863
Alignment:
Q  327 cacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40518820 cacactctctctcataacaaacaattgttaattttctaaatatt 40518863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 11237656 - 11237738
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaa-attcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||| |||||||||||||| | |||  |||   ||||||||||||| |||||||||||||||||||||||||||    
T  11237656 ttcctattataccatcattttaatccactaataattttcaatttttttgcacacattttatctttccaataaatttaatatgt 11237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 23697483 - 23697561
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||| |||||||    ||| ||  ||| |||||||||||||||||||||||||||||||||||||||    
T  23697483 ctattataccctcattataatccattgataattttctatcttttgcacacactttatctttccaataaatttaatatgt 23697561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 11817513 - 11817593
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc 215  Q
    |||||||||| |||| |||| ||| |||||||| ||  || | |||||||||||||||||||||||||||||| |||||||    
T  11817513 aaaattaacaccaaattagcaatgcgtatttttgcagatttttttcctattataccctcattttaatccaccaataaattc 11817593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 30281006 - 30280962
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  30281006 gcacactctctctcataacaaacaattgttaattttttaaatatt 30280962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 52957812 - 52957710
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||| ||||||||||||| |  || |||||||||| ||| || ||||| | ||||||| ||||||||||| || | ||  ||||||||||||||||||||    
T  52957812 agaatattaacatcaaaacaatgaagtgtatttttgcaccttttcttcatgttataccatcattttaatctactaatatgttcttattttttgcacacac 52957713  T
Q  233 ttt 235  Q
    |||    
T  52957712 ttt 52957710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 786641 - 786724
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattctta--ttttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||| ||||||||||||||||||  | ||| ||| ||  |||||| |||||| |||||||||| ||||||||||||||||    
T  786641 ttcctattttaccctcattttaatccattaataatttcctactttttttccacacaatttatctttcaaataaatttaatatgt 786724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 2656269 - 2656190
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattctta--ttttttgcacacactttatctttccaataaatttaatatg 258  Q
    ||||||||||||||||||||||||| | ||| ||| ||  ||||||||| ||| || ||||||| |||||||||||||||    
T  2656269 ctattataccctcattttaatccactactaatttcctattttttttgcaaacatttgatctttcaaataaatttaatatg 2656190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 315
Target Start/End: Original strand, 21965686 - 21965826
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgta 274  Q
    |||||||||||||||||| | ||||||   || ||||||  ||||||||| |||||||||| | | |||||||||| |||| |||||| |||||||  ||    
T  21965686 tcttcctattataccctcgtgttaatctgtcaataaatttctattttttggcacacactttctttgtccaataaatataatgtgttatctttctcttata 21965785  T
Q  275 acaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    |||||| ||||| | | | | | |||||||||| |||||||    
T  21965786 acaaacaattgttagtcactctctttttcttcaacaaattc 21965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 36964480 - 36964584
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    |||| |||||||||||| |||| ||||||||| ||||||| ||||||||  | ||||||| | ||| |||||||||| ||    ||||||||| ||||||    
T  36964480 tctttctattatacccttatttcaatccaccaataaattcatatttttttgaaacactttcttttttcaataaatttgattaaatatatttctttcgtaa 36964579  T
Q  276 caaac 280  Q
    |||||    
T  36964580 caaac 36964584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 43021512 - 43021437
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    |||||||||||| | |||||||||||| || |||| ||||||||   |||||||| |||||||||||||||||||||    
T  43021512 ctattatacccttagtttaatccaccaatatattcatatttttttg-cacactttctctttccaataaatttaatat 43021437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 32769388 - 32769344
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| |||||| |||||| ||||||||    
T  32769388 gcacactctctctcataacaaataattgtcaattttttaaatatt 32769344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 52415536 - 52415492
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||    
T  52415536 gcacactttctctcctaacaaacaattgtcaattttctaaatatt 52415492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 6295412 - 6295451
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  6295412 ctctctctcataacaaataattgtcaattttctaaatatt 6295451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 370
Target Start/End: Original strand, 13254369 - 13254408
Alignment:
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  13254369 ctctctctcataacaaacaattgtcaattttttaaatatt 13254408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 1453955 - 1454053
Alignment:
Q  183 attataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||| ||||||||||| || || |||  |||||| ||||||| |  || ||||| |||||||||||||| ||||| ||||||||  |||||||    
T  1453955 attatacccttattttaatccatcaatagatttctattttcttgcacatatattctcttttcaataaatttaataagttatttttctctcacaacaaac 1454053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 135 - 316
Target Start/End: Complemental strand, 5871442 - 5871260
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacact 233  Q
    |||||||| |||||| ||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||| |    
T  5871442 aaaattaatatcaaattagcgatgtatatttttacacattttcttcctattataccttcattttaatccaccaataaattcctattttttcgcacacatt 5871343  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcc 316  Q
    |||| |||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||| || ||||||||    
T  5871342 ttatttttccaatgaatttaatatgttatttttctcttgtaacaaacaattgtcaattattatttttttctccaacaaattcc 5871260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 138 - 370
Target Start/End: Complemental strand, 14897172 - 14896940
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacacttta 236  Q
    ||||||||||||| ||||| |||||||||| ||| || |||| ||||||| ||||||||||||||||||| || ||||||||||| |||||||| ||||     
T  14897172 attaacatcaaaagagcgaagtgtatttttgcacattttctttctattatgccctcattttaatccaccaatatattcttattttcttgcacacgctttc 14897073  T
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctct 336  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||| | ||  ||| ||||||| ||  ||||||||        ||||||| |||    
T  14897072 tcttttcaataaatttaatatgttatatttctctcgtaacaaacatttgttagttcctatctttttctccaaaaaattcct-tttttttgcacactttct 14896974  T
Q  337 ctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||| |||||||||||||||    
T  14896973 ctcataacaaacaattgtcaattttctaaatatt 14896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 27232277 - 27232040
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    ||||||||||   |||| |||||||||||| ||||  || || |||||  |||||||||||||||||||| |||| ||||||  || |||||||||||||    
T  27232277 agaaaattaaacccaaattagcgatgtgtacttttgtacattttcttc--attataccctcattttaatcaaccaataaattactagttttttgcacaca 27232180  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta-nnnnnnngcaca 330  Q
     |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||| || ||||||| ||        |||||    
T  27232179 ttttatctttcaaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctccaacaaattcttattgttattgcaca 27232080  T
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
     |||||||||||||||||||||||||||||||||||||||    
T  27232079 ttctctctcataacaaacaattgttaattttctaaatatt 27232040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 136 - 314
Target Start/End: Complemental strand, 38402136 - 38401960
Alignment:
Q  136 aaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacacttt 235  Q
    ||||||||||||||||||| |||||||||||| ||| || |||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  38402136 aaattaacatcaaaatagcaatgtgtatttttgcacatt-tctttctattataccctcattttaatccaccgataaattcttaatttttgcacacacttt 38402038  T
Q  236 atctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    |||||||||||||| ||||||||||||  ||||||| |||||||| ||||||  ||||||| ||||||| || ||||||    
T  38402037 atctttccaataaacttaatatgttatcattctctcataacaaacaattgtc-gttattatctttttctccaacaaatt 38401960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 133 - 370
Target Start/End: Complemental strand, 32234292 - 32234057
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||| ||||||||||||||||||||||||||  || || |||||||||||||||||||||| ||||||||| ||||||| ||||||||   |||||    
T  32234292 agaaaatttacatcaaaatagcgatgtgtatttttgtacattttcttcctattataccctcatttcaatccaccaataaattcctatttttt-tgcacac 32234194  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    ||||| |||  ||||||||||||||||||| ||||||||||||||||| ||||| | || |||| |||||||  | |||||| |||       || || |    
T  32234193 tttatttttttaataaatttaatatgttatttttctctcgtaacaaacaattgttagtttttatctttttctctaacaaatttcta-ttttttgcgcatt 32234095  T
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  32234094 ctctcttataacaaacaattgtcaattttctaaatatt 32234057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 34146849 - 34146692
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaata 256  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  34146849 gtgtatttttacacattttctttctattataccctcattttaatccaccaataaattcttatttttttgcacacattttatctttccaataaatttaata 34146750  T
Q  257 tgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    |||||| ||||| ||| ||||||| ||||||  ||||||| ||||||| || ||||||    
T  34146749 tgttatctttctttcgcaacaaacaattgtctgttattatctttttctccaacaaatt 34146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 163 - 305
Target Start/End: Original strand, 7694941 - 7695084
Alignment:
Q  163 tttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaatatgtta 261  Q
    ||||| ||| || ||||||||||||| ||||||||||||| || | ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  7694941 tttttgcacattttcttcctattatatcctcattttaatctacaaataaattcctatttttttgcacacactttatcttttcaataaatttaatatgtta 7695040  T
Q  262 tatttctctcgtaacaaacgattgtcaattattatatttttctt 305  Q
    | ||||||| ||||||||| ||||||| ||||||  ||||||||    
T  7695041 tctttctcttgtaacaaacaattgtcagttattacctttttctt 7695084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 29315253 - 29315399
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacaca 231  Q
    ||||||||  ||| |||||||| | |||||| ||| ||| || ||||||||||||||||||| |||||||||||| || ||  |||||||||| |||| |    
T  29315253 agaaaatttccatgaaaatagcaaagtgtatatttgcacattttcttcctattataccctcaatttaatccaccaatatatatttattttttggcacata 29315352  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||    
T  29315353 ctttatcttttcaataaatttaatatgttatatttttctcgtaacaa 29315399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 370
Target Start/End: Complemental strand, 11087721 - 11087526
Alignment:
Q  179 tcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| || ||| |||||||||  ||||||||||| ||||||| |||||||  ||||||    
T  11087721 tcctattatatcctcattttaatccaccaataaattcttatttttttcatacattttatctttttaataaatttaacatgttatctttctcttataacaa 11087622  T
Q  279 acgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctct----ctcataacaaacaattgttaattttctaaatatt 370  Q
    || ||||||| ||| ||| ||||||| || ||||||| |        || ||||||||    |||||||||||||||||| |||||| ||||||||    
T  11087621 acaattgtcagttactatctttttctccaacaaattcatttttttatgcgcactctctctcactcataacaaacaattgtcaattttttaaatatt 11087526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 1256253 - 1256378
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacaca 231  Q
    |||||||||||| | || ||||  ||||||||||| ||| || | | |||||||||| || |||||||||||||| |||||||||||||||| |||||||    
T  1256253 agaaaattaacaccgaattagcattgtgtatttttgcacattttttccctattatactctaattttaatccaccaataaattcttattttttagcacaca 1256352  T
Q  232 ctttatctttccaataaatttaatat 257  Q
    ||||||||||||||||||||||||||    
T  1256353 ctttatctttccaataaatttaatat 1256378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 158 - 370
Target Start/End: Complemental strand, 34039458 - 34039250
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaata 256  Q
    |||||||||||||| || |||| ||||| || |||| ||||||||||||| || |||| |||||| ||||||||| ||| |||||||||||| |||||||    
T  34039458 gtgtatttttacacattttctttctattttatcctcgttttaatccaccaatatattcctattttcttgcacacattttctctttccaataagtttaata 34039359  T
Q  257 tgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctcataacaaacaattgtta 356  Q
    | |||| |||||||| |||||||   |||| | ||| ||||||||||| || |||||||||            || |||||||||||||||||||||| |    
T  34039358 tattatctttctctcataacaaatatttgttagttactatatttttctccaacaaattcctttttttt-----acactctctcataacaaacaattgtca 34039264  T
Q  357 attttctaaatatt 370  Q
    ||||||||||||||    
T  34039263 attttctaaatatt 34039250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 35970094 - 35970232
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||| ||||||| |||| |||| | |||||||||| ||| || ||||||||| |||||||| ||||||||||||| || |||| |||||||| ||||| |    
T  35970094 agaatattaacaccaaattagcaaagtgtatttttgcacattttcttcctatcataccctcgttttaatccaccaatatattcctatttttttcacacgc 35970193  T
Q  233 tttatctttccaataaatttaatatgttatatttctctc 271  Q
    ||| | ||||||||||||||||||||||||  |||||||    
T  35970194 tttctttttccaataaatttaatatgttatcattctctc 35970232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 288
Target Start/End: Original strand, 1530220 - 1530376
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgc-acaca 231  Q
    |||||||||||| | || ||| || |||||||||| ||  || ||||| ||||||||| ||||||||||| || | ||| ||| |||||||| | |||||    
T  1530220 agaaaattaacaccgaattagggaggtgtatttttgcaaattttcttcttattataccttcattttaatctacaaataacttcctatttttttccacaca 1530319  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtca 288  Q
     ||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||    
T  1530320 ttttatcttttcaataaatttaatatgttatctttctttcgtaacaaacaattgtca 1530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 3742313 - 3742190
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaata 256  Q
    |||||||||| ||| || ||||  ||||||||||||| |||||||||||| || ||   || |||||| | |||||||||||||||||||||||||||||    
T  3742313 gtgtatttttgcacattttctttttattataccctcaatttaatccaccaatatatctctactttttgacgcacactttatctttccaataaatttaata 3742214  T
Q  257 tgttatatttctctcgtaacaaac 280  Q
    |||||||||| |||| ||||||||    
T  3742213 tgttatatttttctcataacaaac 3742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 3443350 - 3443464
Alignment:
Q  147 aaaatagcgatgtgtatttttacacg-ttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacacactttatctttcca 244  Q
    |||||||||| |||||||||| |||  || | |||||||||||||||||||||||||||| | ||| ||| |||| |||| |||||||||||||| ||||    
T  3443350 aaaatagcgaagtgtatttttgcacactttttttcctattataccctcattttaatccactaataatttcctattctttttcacacactttatctatcca 3443449  T
Q  245 ataaatttaatatgt 259  Q
    |||||||||||||||    
T  3443450 ataaatttaatatgt 3443464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 9455639 - 9455560
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattctta-ttttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||| ||| | ||| |||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  9455639 ctattataccctcattttaatacactaataatttcttacttttttgcacacattttatttttccaataaatttaatatgt 9455560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 326 - 370
Target Start/End: Complemental strand, 36683026 - 36682982
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36683026 gcacactctctctcataacaaacaattgttaattttctaaatatt 36682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 2742601 - 2742684
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattc-----ttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| | ||| |||     || ||||||||||||| |||||||||||||||||||||||||||    
T  2742601 ctattataccctcattttaatccactaataatttcttttttttttttttgcacacattttatctttccaataaatttaatatgt 2742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 36683520 - 36683400
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    ||||||||  ||| |||||||| | |||||||||| ||| || ||||||||||||||||||| ||||||| || |  | ||   |||||||||  |||||    
T  36683520 agaaaatttccatgaaaatagcaaagtgtatttttgcacattttcttcctattataccctcaatttaatcgactaacatatctctattttttg-gcacac 36683422  T
Q  233 tttatctttccaataaatttaa 254  Q
    ||||||||||||||||||||||    
T  36683421 tttatctttccaataaatttaa 36683400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 35970604 - 35970503
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaa 275  Q
    ||||||||| |||||||| ||||||||||||| || |||| | |||||| | |||||||| | |||  ||||||||||||||||||| |||||||| |||    
T  35970604 tcttcctatcataccctcgttttaatccaccaatatattcct-ttttttccgcacactttctttttt-aataaatttaatatgttatctttctctcataa 35970507  T
Q  276 caaa 279  Q
    ||||    
T  35970506 caaa 35970503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 25307515 - 25307602
Alignment:
Q  179 tcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatattt 266  Q
    ||||||||||||||| |||||||||| || |||| || ||||||||||| |   ||| ||||| ||||||||| | ||||||||||||    
T  25307515 tcctattataccctcgttttaatccatcaataaaatcatattttttgcagaggttttttcttttcaataaattaattatgttatattt 25307602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 369
Target Start/End: Original strand, 29315473 - 29315516
Alignment:
Q  326 gcacactctctctcataacaaacaattgttaattttctaaatat 369  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  29315473 gcacactctctctcataacaaacaattgtcaattttttaaatat 29315516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 30887514 - 30887600
Alignment:
Q  229 acactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    |||||||||||||  |||||||||||||||| || |||||||| ||||||||  |||| | ||| ||| ||||||| || |||||||    
T  30887514 acactttatctttttaataaatttaatatgtaatttttctctcctaacaaacatttgttagttactatctttttctccaacaaattc 30887600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 16892608 - 16892690
Alignment:
Q  195 ttttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    |||||||||| || |||||| ||||||||| ||||||  || ||||| ||||||||||||| || || |||||||||| ||||||    
T  16892608 ttttaatccatcaataaatttttattttttacacaca--ttctcttttcaataaatttaatgtgatacatttctctcgcaacaaa 16892690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 25444462 - 25444515
Alignment:
Q  177 cttcctattataccctcattttaatccaccattaaattcttattttttgcacac 230  Q
    |||||||| ||||||||||||||||||| || |||| || ||||||||||||||    
T  25444462 cttcctatcataccctcattttaatccatcaataaaatcatattttttgcacac 25444515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 38459141 - 38459085
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc 215  Q
    |||||||||||||  | |||| |||||||||||||||||||||||| || |||||||    
T  38459141 tgtatttttacacaatttctttctattataccctcattttaatccaacaataaattc 38459085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 38401945 - 38401908
Alignment:
Q  333 ctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||| || ||||||||||||    
T  38401945 ctctctcataacaaacaattgtcaactttctaaatatt 38401908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 39140050 - 39140134
Alignment:
Q  196 tttaatccaccattaaattcttatttt--ttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaa 278  Q
    |||||||||||| |||||||  |||||  ||||||| | ||||||||| ||||||||||||| | |||| ||| |||| ||||||    
T  39140050 tttaatccaccaataaattccaattttttttgcacaaaatttatcttttcaataaatttaatgtattatttttgtctcataacaa 39140134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 7578009 - 7578045
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| |||||||||||| |||||||||||||||||    
T  7578009 tctctcttaacaaacaatttttaattttctaaatatt 7578045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 7940450 - 7940414
Alignment:
Q  226 cacacactttatctttccaataaatttaatatgttat 262  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  7940450 cacacactttctctttccaataaatttaatgtgttat 7940414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 135 - 315
Target Start/End: Complemental strand, 8049961 - 8049778
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt---ttttgcacaca 231  Q
    |||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||||||||| |||||||| ||||||||||||   |||||||||||    
T  8049961 aaaattaacaccaaaatagcgatgtgtgtttttgcacattttcttcctattataccctcattttgatccaccaataaattcttatttttttttgcacaca 8049862  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||| ||||| | ||||||| ||||||| || |||||||    
T  8049861 ctttatatttccaataaatttaatatgttatctttctctcataacaaacaattgttacttattatctttttctccatcaaattc 8049778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 176 - 370
Target Start/End: Original strand, 2437285 - 2437479
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaatatgttatatttctctcgta 274  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||| ||    
T  2437285 tcttcctattataccatcattttaatccaccaataaattcctatttttttgcacacactttatctttccaataaatttaatatgttatctatctctcata 2437384  T
Q  275 acaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| ||||||||||||||| |||||||||| ||||||  ||       || | |||||||| ||||||||||||||| |||||||||||||||    
T  2437385 acaaactattgtcaattattatctttttcttcaacaaattttta-ttttttgcgcgctctctcttataacaaacaattgtcaattttctaaatatt 2437479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 135 - 280
Target Start/End: Complemental strand, 25057165 - 25057020
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactt 234  Q
    |||||||||||||||||| ||||| ||||||||| || || ||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||    
T  25057165 aaaattaacatcaaaataacgatgggtatttttatacattttcttcctattataccttcaatttaatccatcaataaattcttattttttgcacacactt 25057066  T
Q  235 tatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  25057065 tatctttccaataaatttaatgtgttatctttctctcataacaaac 25057020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 133 - 314
Target Start/End: Original strand, 14093227 - 14093409
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaa-ttcttattttttgcacaca 231  Q
    ||||| |||||| |||| |||| |||||||||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||  |||||||||||||    
T  14093227 agaaagttaacaccaaattagcaatgtgtatttttgcacattttcttcctattataccctcattttaatccatcaataaacttctatttttttgcacaca 14093326  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaatt 314  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||  ||||||| ||||||| || ||||||    
T  14093327 ctttatccttccaataaatttaatatgtcatctttctctcgtaacaaacaattgtcggttattatctttttctacaacaaatt 14093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 23411089 - 23410988
Alignment:
Q  179 tcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    ||||||||||||||||||||||||||||| || |||| |||||||| ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  23411089 tcctattataccctcattttaatccaccaatatattcctatttttttgcatacactttctctttccaataaatttaatatgttatctttctctcgtaaca 23410990  T
Q  278 aa 279  Q
    ||    
T  23410989 aa 23410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 280
Target Start/End: Original strand, 26252026 - 26252173
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacaca 231  Q
    ||||||||  ||| |||||||  | ||||||||||  || || ||||||||||||||||||| ||||||| |||| || ||   ||||||||| ||||||    
T  26252026 agaaaatttccatgaaaatagtaaagtgtatttttgtacattttcttcctattataccctcaatttaatc-accaatatatctctattttttggcacaca 26252124  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  26252125 ctttatctttctaataaatttaatatgttatatttttctcgtaacaaac 26252173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 21526951 - 21527064
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaa 245  Q
    |||||||||| |||||||||| |||  | | ||||||||| |||||||||||||||||| | ||| ||| |||||| ||||||||||||||||||| |||    
T  21526951 aaaatagcgaagtgtatttttgcacacttttttcctattacaccctcattttaatccactaataatttcctatttttttgcacacactttatcttttcaa 21527050  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  21527051 taaatttaatatgt 21527064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 286
Target Start/End: Original strand, 6110665 - 6110794
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaataaatttaata 256  Q
    |||||||||||||| || |||| |||||||||  |||||||||||||| | | |||| ||||||| |||||||||||||   ||| ||||||||||||||    
T  6110665 gtgtatttttacacattttctttctattatactttcattttaatccactaatgaattattattttcttgcacacactttccgttttcaataaatttaata 6110764  T
Q  257 tgttatatttctctcgtaacaaacgattgt 286  Q
    ||| || ||||||| ||||||||| |||||    
T  6110765 tgtcatctttctcttgtaacaaacaattgt 6110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 7972289 - 7972402
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttt-ttgcacacactttatctttccaa 245  Q
    |||||| ||| |||||||||| |||  | | || ||||||||||||||||||||||||| | ||| ||| |||||| ||||||||| |||||||||||||    
T  7972289 aaaataacgaagtgtatttttgcacactttttttctattataccctcattttaatccactaataatttcctatttttttgcacacattttatctttccaa 7972388  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  7972389 taaatttaatatgt 7972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 6026642 - 6026522
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||| |||||||  |||||||| | |||||| ||| ||| || |||| ||||||||| ||||||||||||||| | || |||| |||||||| |||||||    
T  6026642 agaatattaacacaaaaatagcaaagtgtatgtttgcactttttctttctattatactctcattttaatccacgaatatattcatattttttacacacac 6026543  T
Q  233 tttatctttccaataaattta 253  Q
    ||| |||||||||||||||||    
T  6026542 tttctctttccaataaattta 6026522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 31656166 - 31656043
Alignment:
Q  158 gtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaataaatttaata 256  Q
    ||||||||| |||| || |||| |||||||||||||||||||||  |||| || |||| ||||||| || |||||  || ||||| |||||||||||||     
T  31656166 gtgtattttaacacattttctttctattataccctcattttaatttaccaatagattcatatttttctggacacatgttctcttttcaataaatttaatg 31656067  T
Q  257 tgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||| ||||||||    
T  31656066 tgttatatttctctcataacaaac 31656043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 315
Target Start/End: Complemental strand, 31661027 - 31660870
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttt-tgcacacactttatctttccaataaatttaatat 257  Q
    |||||||| |||  || ||||||||||||||| ||||||||||| |||| |  |||| ||| ||| || ||||||||| ||||||||||||||||||| |    
T  31661027 tgtattttaacatattttcttcctattataccttcattttaatctaccaattgattcctatctttctggacacactttctctttccaataaatttaatgt 31660928  T
Q  258 gttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    ||||| |||||||| || ||||| || || | ||| | | |||||||||| |||||||    
T  31660927 gttatctttctctcatagcaaacaatcgttagttactctctttttcttcaacaaattc 31660870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 21013160 - 21013257
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaac 276  Q
    |||||||||||||||| ||| ||||||||| | |||| |||||||||||||| | ||||||| |||||||||||| || |||||| |||||||| ||||    
T  21013160 ttcctattataccctcgttt-aatccaccaatcaatttttattttttgcacaaaatttatctctccaataaatttcatgtgttatctttctctcataac 21013257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 9353706 - 9353611
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    |||||||||||||||||||| |||||| ||| ||| ||||||||  |||||| ||||||||  |||||||||||||| |||| |||||| |||||||    
T  9353706 ctattataccctcattttaa-ccaccaataagttcctattttttcgacacacattatctttaaaataaatttaatatattatctttctcccgtaaca 9353611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 8049757 - 8049675
Alignment:
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||| |||||   ||||||| ||||||| || |||||||    
T  8049757 tttatatttccaataaatttaatatgttatctttctctcataacaaacaattgttgcttattatctttttctccaacaaattc 8049675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 31871454 - 31871556
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    |||||||| ||||||| ||||||||||| | ||||||  |||||||| || |||||||||||||  |||| |||||||  ||||| |||||||| |||||    
T  31871454 ttcctattgtaccctctttttaatccactaataaatttctattttttacaaacactttatcttttaaatagatttaatgggttatttttctctcataaca 31871553  T
Q  278 aac 280  Q
    |||    
T  31871554 aac 31871556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 280
Target Start/End: Complemental strand, 4123175 - 4123132
Alignment:
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||    
T  4123175 tctttccaataaatttaatgtgttatctttctctcataacaaac 4123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 7972466 - 7972502
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  7972466 tctctcataacaaacaattttcaattttctaaatatt 7972502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 135 - 370
Target Start/End: Complemental strand, 1375 - 1140
Alignment:
Q  135 aaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacact 233  Q
    |||||||||| || |||||| ||||||||||||  || || |||||||||||| | |||||||||||| |||| |||||| |||||||||| ||||||||    
T  1375 aaaattaacaccagaatagcaatgtgtatttttgtacattttcttcctattatgctctcattttaatc-accaataaatttttattttttgacacacact 1277  T
Q  234 ttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactc 333  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||| ||||||| ||||||| || |||||||          || | |||    
T  1276 ttatcttttcaataaatttaatatgttatctttctctcttaacaaacaattgtcacttattatctttttctccaacaaattcaattttttttgcgcgctc 1177  T
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1176 tctctcataacaaacaattgtcaattttctaaatatt 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 136 - 317
Target Start/End: Complemental strand, 257386 - 257205
Alignment:
Q  136 aaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacacactt 234  Q
    |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| || ||||||| || ||||||||||||||||    
T  257386 aaattaacacgaaaatagcgatgtgtatttttacacattttcttcctattataccctcatattaatccatcaataaattcctatttttttgcacacactt 257287  T
Q  235 tatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcct 317  Q
    ||||||| ||||||||||||||||||||  |||||||| ||||||| |||| || ||||||| |||||||||| | |||||||    
T  257286 tatcttttcaataaatttaatatgttatccttctctcgaaacaaacaattg-cagttattatctttttcttcaacgaattcct 257205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 271926 - 272006
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttattttttg--cacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||||||||||| | ||| ||||| ||||||   |||||||||||||||| |||||||||||||||||    
T  271926 ctattataccctcattttaatccactaataatttcttttttttttttcacacactttatcttttcaataaatttaatatgt 272006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 9e-49; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 16806052 - 16806280
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||| | |||||||| ||||||||||||| |||||| ||||||||||||||||| |||||||||||||| | |          |||||||||||    
T  16806052 agaaaattaaaaccaaaatagtgatgtgtatttttgcacgttttcttcctattataccctaattttaatccaccaatga----------tttgcacacac 16806141  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta-nnnnnnngcacac 331  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||  | ||||||| ||        || | |    
T  16806142 tttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctctaacaaattcatattttttgtgctctc 16806241  T
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16806242 tctctctcataacaaacaattgtcaattttctaaatatt 16806280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 16845333 - 16845561
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||| | |||||||| ||||||||||||| |||||| ||||||||||||||||| |||||||||||||| | |          |||||||||||    
T  16845333 agaaaattaaaaccaaaatagtgatgtgtatttttgcacgttttcttcctattataccctaattttaatccaccaatga----------tttgcacacac 16845422  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta-nnnnnnngcacac 331  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| |||||||  | ||||||| ||        || | |    
T  16845423 tttatctttccaataaatttaatatgttatctttctctcgtaacaaacaattgtcagttattatctttttctctaacaaattcatattttttgtgctctc 16845522  T
Q  332 tctctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16845523 tctctctcataacaaacaattgtcaattttctaaatatt 16845561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 29408347 - 29408504
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| ||||||| |||||||||||||| ||| || |||| |||||||||||||||||||||||||||  ||||||||||||||| || ||||    
T  29408347 agaaaattaacaccaaaataacgatgtgtatttttgcacattttctttctattataccctcattttaatccaccaacaaattcttatttttt-catacac 29408445  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatt 291  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  29408446 tttatcttttcaataaatttaatatgttatctttctctcataacaaacaattgtcaatt 29408504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 138 - 317
Target Start/End: Complemental strand, 11084495 - 11084315
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacacacttta 236  Q
    ||||||||||||||||  | |||| |||||| || || ||||||||||||||||||||||||||| |||| || |||| |||| |||||||||||||||     
T  11084495 attaacatcaaaatagtaaagtgtgtttttatacattttcttcctattataccctcattttaatctaccaatatattcatattattttgcacacactttc 11084396  T
Q  237 tctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcct 317  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||| ||||| ||| ||||||| || |||||||||    
T  11084395 tctttccaataaatttaatatgttatctttctctcgtaacaaacatttgttaattaatatttttttctccaacaaattcct 11084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 3309425 - 3309583
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||||||||| | |||||||||||||| ||| || |||||||||||||||||||||||||| || || ||||||| || ||||||||||||     
T  3309425 agaaaattaacatcaaaacaacgatgtgtatttttgcacattttcttcctattataccctcattttaattcatcaataaattcctactttttgcacacat 3309524  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatt 291  Q
    ||||| ||| |||| ||||||||||||||| |||||||| |||||||| ||||||||||    
T  3309525 tttatattttcaatcaatttaatatgttatctttctctcttaacaaacaattgtcaatt 3309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 1398083 - 1397941
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacac 232  Q
    |||||||||||| |||||||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||| ||||||| ||| |    |||||||    
T  1398083 agaaaattaacaccaaaatagcgatgtgtatttttgcacattttcttccaattataccctcattttaatccaccaataaattcctatct----cacacac 1397988  T
Q  233 tttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  1397987 tttatctttccaataaatttaatatgttatgtttctcccgtaacaaa 1397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 25713870 - 25713976
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattc--ttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgt 273  Q
    |||||||||||||||||||||||||||||||| || ||||  || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  25713870 tcttcctattataccctcattttaatccaccaatatattccttttttttttgcacacactttctctttccaataaatttaatatgttatctttctctcgt 25713969  T
Q  274 aacaaac 280  Q
    |||||||    
T  25713970 aacaaac 25713976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 45271898 - 45271979
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  45271898 tcttcctattataccctcattttaatccaccattacatttttattttttgcacacactttatctttccaataaatttaatat 45271979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 133 - 280
Target Start/End: Complemental strand, 41541775 - 41541627
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacaca 231  Q
    |||| ||||||| ||||||| | | ||||| |||| ||  || ||||||||||||||||| |||||||||||||| || ||||||||| |||| ||||||    
T  41541775 agaatattaacaccaaaataacaaagtgtacttttgcatattttcttcctattatacccttattttaatccaccaatatattcttattctttttcacaca 41541676  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||| |||||||||||||||||||||||||| ||||||  |||||||||    
T  41541675 ctttctctttccaataaatttaatatgttatttttctcctgtaacaaac 41541627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 140 - 318
Target Start/End: Original strand, 42871927 - 42872102
Alignment:
Q  140 taacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatt-ttttgcacacactttatc 238  Q
    ||||||||||||||||| |||||||||| ||  || ||||||||| |||||||||||||||||||||| || |||| |||| |||||  |||||||| ||    
T  42871927 taacatcaaaatagcgaagtgtatttttgcatattttcttcctatcataccctcattttaatccaccaatatattcctattattttg--cacactttctc 42872024  T
Q  239 tttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
      || ||||||||||||||||||| |||||||||||||||||  |||| | ||| ||| |||||||||| ||||||||||    
T  42872025 actctaataaatttaatatgttat-tttctctcgtaacaaacatttgttagttactat-tttttcttcaacaaattccta 42872102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 21253136 - 21253025
Alignment:
Q  182 tattataccctcattttaatccaccattaaat--tcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    ||||||||| |||||||||||||||| |||||  | || ||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  21253136 tattataccttcattttaatccaccaataaatattttttttttttgcacacactttatcttttcaataaatttaatatgttatttttctctagtaacaaa 21253037  T
Q  280 cgattgtcaatt 291  Q
    | ||||| ||||    
T  21253036 caattgttaatt 21253025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 36243575 - 36243677
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaaca 277  Q
    ||||||||||||||||||||||||| |||| |  |||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||| || |||||    
T  36243575 ttcctattataccctcattttaatcaaccaatgtattcctattttttgcatacactttctctttccaataaatttaatatgttatctttctttcataaca 36243674  T
Q  278 aac 280  Q
    |||    
T  36243675 aac 36243677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 44898772 - 44898631
Alignment:
Q  146 caaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacacactttatctttcca 244  Q
    |||| |||||| |||||||| ||||| || | || ||||||||||||||||||||||||||| ||||||||||||||||  |  |||||||  ||||  |    
T  44898772 caaattagcgaagtgtatttctacacattttatttctattataccctcattttaatccaccaataaattcttattttttttcttacactttcccttttta 44898673  T
Q  245 ataaatttaatatgttatatttctctcgtaacaaacgattgt 286  Q
    ||||||||||||| |||| ||||||||||||||||| |||||    
T  44898672 ataaatttaatatattatttttctctcgtaacaaacaattgt 44898631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 157652 - 157771
Alignment:
Q  161 tatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgtt 260  Q
    ||||||||||| || ||||||||||||| ||||||||||||||| ||  || || ||||||||||||||||||||   |||| |||||||||||||||||    
T  157652 tatttttacacattttcttcctattatatcctcattttaatccatcagcaattttttattttttgcacacactttccatttctaataaatttaatatgtt 157751  T
Q  261 atatttctctcgtaacaaac 280  Q
    || ||||| | |||||||||    
T  157752 atctttcttttgtaacaaac 157771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 133 - 370
Target Start/End: Original strand, 20170930 - 20171163
Alignment:
Q  133 agaaaattaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta-ttttttgcacaca 231  Q
    |||| ||||||||  ||||||||| |||||||||| ||| || |||||||||||||||||||||||||||||||| || |||| || ||||||| |||||    
T  20170930 agaatattaacattgaaatagcgaagtgtatttttgcacattttcttcctattataccctcattttaatccaccaatatattcctatttttttgtacaca 20171029  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcc-tannnnnnngcaca 330  Q
    ||||   |||   |||| ||| || |||||| |||||||||||||||||   | | | ||| ||| ||||||| || |||||||| ||       ||| |    
T  20171030 cttt---ttt---ataattttcatttgttatctttctctcgtaacaaacatgtattagttactatctttttctccaacaaattccttatttttttgcata 20171123  T
Q  331 ctctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||| | | |||||||||||||||    
T  20171124 ctctctctcataacaaacaaatatcaattttctaaatatt 20171163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 34424408 - 34424521
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattt-tttgcacacactttatctttccaa 245  Q
    |||||||||| ||||||||||||||  | | || |||||||||||| ||||||||||||   ||| ||| ||||| ||||||||||||||||||||||||    
T  34424408 aaaatagcgaagtgtatttttacacactttttttctattatacccttattttaatccactgataatttcctatttctttgcacacactttatctttccaa 34424507  T
Q  246 taaatttaatatgt 259  Q
    ||||||||||||||    
T  34424508 taaatttaatatgt 34424521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 4959040 - 4959122
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattc-ttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||||||||||| | ||| ||| || |||||||||||||||||||||||||| ||||||||||||||    
T  4959040 ttcctattataccctcattttaatccactaataatttcctttttttttgcacacactttatctttccattaaatttaatatgt 4959122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 370
Target Start/End: Complemental strand, 15508045 - 15507818
Alignment:
Q  146 caaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaa--ttcttattttttgcacacactttatctttcc 243  Q
    |||||||||||  ||||||||| | |  | ||||||||||||||| |||||||||||||||| || |  ||||  ||||||||| ||||||  | |||||    
T  15508045 caaaatagcgaattgtatttttgctcactttcttcctattataccttcattttaatccaccaatatattttctatttttttgcatacacttcctttttcc 15507946  T
Q  244 aataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcaca--ctctctctcat 341  Q
     || ||||||||||||||| ||||| || ||||||||  |||| | ||| ||| ||||||| || | ||||| ||       |||||  |||||||||||    
T  15507945 -attaatttaatatgttatctttctgtcttaacaaacatttgttagttactatgtttttctccaactaattcttatttttttgcacactctctctctcat 15507847  T
Q  342 aacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||| ||||||||| |||||    
T  15507846 aacaaacaattgtcaattttctatatatt 15507818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 25713514 - 25713658
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc--ttattttttgcacacacttt 235  Q
    |||||||  |||||| ||| |||||||||| ||  || ||||||||||||||||||||||||||| | || || ||||  ||  |||||| |||||||||    
T  25713514 attaacactaaaataacgaagtgtattttttcagtttttcttcctattataccctcattttaatctaacaatatattccttttatttttgaacacacttt 25713613  T
Q  236 atctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
     |||||||||||| ||||| ||||||| |||||| | ||||||||    
T  25713614 ctctttccaataattttaacatgttatttttctcacataacaaac 25713658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 27747041 - 27746964
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatat 257  Q
    ||||||||||||||||||||||||| | ||| ||| |||||||| ||||||||||||| |||||||||||||||||||    
T  27747041 ctattataccctcattttaatccactaataatttcctatttttttgcacacactttatttttccaataaatttaatat 27746964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 370
Target Start/End: Original strand, 45272930 - 45273061
Alignment:
Q  247 aaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacactctctctc------- 339  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||| || ||||||||||       |||| |||||||||           
T  45272930 aaatttaatatgttatatttctctcgtaacaagcaattgtcagttattatctttttctccatcaaattcctatttttttgcacgctctctctccctatct 45273029  T
Q  340 -ataacaaacaattgttaattttctaaatatt 370  Q
     ||||||||||||||| |||||||||||||||    
T  45273030 tataacaaacaattgtcaattttctaaatatt 45273061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 12413054 - 12412943
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta--ttttttgcacacactttatctttcca 244  Q
    |||| ||||| |||||||||| |||  | | |||||||||||||||||||||||||||  | ||  ||  ||  ||||||||||||||||||||||||||    
T  12413054 aaaaaagcgaagtgtatttttgcacacttttttcctattataccctcattttaatccattaatagttttctaatttttttgcacacactttatctttcca 12412955  T
Q  245 ataaatttaata 256  Q
    ||||||||||||    
T  12412954 ataaatttaata 12412943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 12425114 - 12425003
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta--ttttttgcacacactttatctttcca 244  Q
    |||| ||||| |||||||||| |||  | | |||||||||||||||||||||||||||  | ||  ||  ||  ||||||||||||||||||||||||||    
T  12425114 aaaaaagcgaagtgtatttttgcacacttttttcctattataccctcattttaatccattaatagttttctaatttttttgcacacactttatctttcca 12425015  T
Q  245 ataaatttaata 256  Q
    ||||||||||||    
T  12425014 ataaatttaata 12425003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 4700743 - 4700864
Alignment:
Q  194 attttaatccaccattaaattcttattttttg-cacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaatta 292  Q
    |||||||||||||| || |||| ||||||||  |||||||||| ||||| |||||| ||||||||||||| ||||| ||||||||||  ||||| | |||    
T  4700743 attttaatccaccaatatattcatatttttttacacacactttctctttacaataa-tttaatatgttatctttctttcgtaacaaataattgttagtta 4700841  T
Q  293 ttatatttttcttcagcaaattc 315  Q
     ||| ||||||| || |||||||    
T  4700842 gtatctttttctccaacaaattc 4700864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 7485738 - 7485839
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatat 257  Q
    |||||||||| || || | |||||||||||| |||||||||||| || | ||| ||| |||||||| ||| ||||||||||||| ||||||||||| |||    
T  7485738 tgtatttttagacatttttttcctattatactctcattttaatctactaataatttcctatttttttgcatacactttatctttgcaataaatttagtat 7485837  T
Q  258 gt 259  Q
    ||    
T  7485838 gt 7485839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 25965312 - 25965394
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattc--ttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||||||||||||||| ||||||| | | | |||  || |||||| ||||||||||||||||||||||||||||||||||    
T  25965312 ttcctattataccctcattt-aatccactaattatttccttttttttttacacacactttatctttccaataaatttaatatgt 25965394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 368
Target Start/End: Complemental strand, 4317216 - 4316986
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt----gcacacact 233  Q
    |||| ||||||| |||||| ||||||||||  || || |||| |||||||| ||| |||||||||||||| ||||||||| ||||||    |||||  ||    
T  4317216 attagcatcaaattagcgaagtgtatttttctacattttctttctattatatccttattttaatccaccaataaattcttttttttttttcgcacaagct 4317117  T
Q  234 ttatctttccaataaatttaata-tgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattcctannnnnnngcacact 332  Q
    || | ||| | ||||||||||||   |||| |||||||| |||||||| ||||| ||||| ||| | |||||  | ||||| ||||          ||      
T  4317116 ttcttttttccataaatttaatacatttatctttctctcataacaaacaattgttaattactatctctttctcaaacaaatacctattttt-----cata 4317022  T
Q  333 ctctctcataacaaacaattgttaattttctaaata 368  Q
    |||||||||||||||||||||| |||||||||||||    
T  4317021 ctctctcataacaaacaattgtcaattttctaaata 4316986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 13588595 - 13588490
Alignment:
Q  181 ctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgttatatttctctcgtaacaaa 279  Q
    ||||||||||||| ||| ||||||||| |||||| ||||||||| ||| | | ||| |||||| |||||||||||| |||||| || ||||| |||||||    
T  13588595 ctattataccctcgttt-aatccaccaataaatttttatttttttgcataaaatttctctttcaaataaatttaatgtgttattttcctctcataacaaa 13588497  T
Q  280 cgattgt 286  Q
    | |||||    
T  13588496 caattgt 13588490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 33660100 - 33660064
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||||||||||||||||    
T  33660100 tctctcataacaaacaattgttaattttctaaatatt 33660064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 280
Target Start/End: Complemental strand, 33660715 - 33660583
Alignment:
Q  147 aaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaa 245  Q
    |||||||| | |||||||||| ||| || ||||  |||||||| ||||||||||| ||||  |   ||| |||||||| |||||  |||| |||||| ||    
T  33660715 aaaatagcaaagtgtatttttgcaccttttctttgtattatactctcattttaattcacccatg--ttcctatttttttgcacaggctttctctttctaa 33660618  T
Q  246 taaatttaatatgttatatttctctcgtaacaaac 280  Q
    |||||||||||| ||||||||||||| || |||||    
T  33660617 taaatttaatatattatatttctctcatagcaaac 33660583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 408020 - 408127
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttatttttt-gcacacactttatctttccaataaatttaatatgttatatttctctcgtaac 276  Q
    |||||| ||||||||||||||||| ||||| ||||| |||||||||| ||||| |||||   ||| |||| ||||||||  ||||| |||||||| ||||    
T  408020 ttcctagtataccctcattttaat-caccaataaatccttattttttcgcacatacttttctttttcaat-aatttaatgagttatctttctctcataac 408117  T
Q  277 aaacgattgt 286  Q
    |||| |||||    
T  408118 aaacaattgt 408127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 11814787 - 11814722
Alignment:
Q  191 ctcattttaatccaccattaaattct-tattttttgcacacactttatctttccaataaatttaat 255  Q
    ||||||||||||||| | |||||||| | |||||||||||||||||||||||   |||||||||||    
T  11814787 ctcattttaatccactaataaattctattttttttgcacacactttatctttattataaatttaat 11814722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 37815011 - 37814934
Alignment:
Q  185 tataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttat 262  Q
    ||||||| ||||||||||||| | |||| |  | ||||||||||||||||| |||||| ||| |||||||| ||||||    
T  37815011 tatacccccattttaatccacaaataaaattattttttttgcacacactttctctttcgaatcaatttaatgtgttat 37814934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 370
Target Start/End: Original strand, 32113128 - 32113171
Alignment:
Q  327 cacactctctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||||||||||||||||||||||||| |||||| || |||||    
T  32113128 cacactctctctcataacaaacaattgtcaattttttagatatt 32113171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 4135850 - 4135777
Alignment:
Q  180 cctattataccctcattttaatccaccattaaattctta-ttttttgcacacactttatctttccaataaattt 252  Q
    |||||||||||||| ||||||||||||| || |||| || |||||||  |||||  | ||||||||||||||||    
T  4135850 cctattataccctcgttttaatccaccaatagattcatatttttttgtgcacaccctctctttccaataaattt 4135777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 370
Target Start/End: Complemental strand, 21253043 - 21253014
Alignment:
Q  341 taacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||||||||||||    
T  21253043 taacaaacaattgttaattttctaaatatt 21253014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 3309558 - 3309594
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    |||||| |||||||||||||| |||||||||||||||    
T  3309558 tctctcttaacaaacaattgtcaattttctaaatatt 3309594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 4959190 - 4959226
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  4959190 tctctcataacaaacaattttcaattttctaaatatt 4959226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 25965465 - 25965501
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  25965465 tctctcataacaaacaattttcaattttctaaatatt 25965501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 29408479 - 29408515
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  29408479 tctctcataacaaacaattgtcaattttataaatatt 29408515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 338 - 370
Target Start/End: Original strand, 34424595 - 34424627
Alignment:
Q  338 tcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||| |||||||||||||||||    
T  34424595 tcataacaaacaatttttaattttctaaatatt 34424627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 747 - 561
Alignment:
Q  135 aaaattaacatcaaa--atagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttattttttg-cacaca 231  Q
    |||||||||||||||  ||||||||||||| |||||||| || |||| |||||||||||| |||||||||||||| ||||||  ||||||||  ||||||    
T  747 aaaattaacatcaaattatagcgatgtgtacttttacacattttctttctattataccctaattttaatccaccaataaatttctatttttttacacaca 648  T
Q  232 ctttatctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattccta 318  Q
    |||||||||||||||||||| | |||||||| |||||||||||| ||||  |||||  ||||||| ||||||| || ||||||||||    
T  647 ctttatctttccaataaattaagtatgttatctttctctcgtaataaacacttgtctgttattatctttttctccaacaaattccta 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 176 - 280
Target Start/End: Original strand, 4208 - 4313
Alignment:
Q  176 tcttcctattataccctcattttaatccaccattaaattc-ttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgta 274  Q
    |||||||||||||||||||||||||||||||| || |||| || ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  4208 tcttcctattataccctcattttaatccaccaatatattcctttttttttgcacacactttctctttccaataaatttaatatattatctttctctcgta 4307  T
Q  275 acaaac 280  Q
    ||||||    
T  4308 acaaac 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 3852 - 3996
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattc--ttattttttgcacacacttt 235  Q
    |||||||  |||||| ||| |||||||||| ||  || ||||||||||||||||||||||||||| | || || ||||  || |||||||||||||||||    
T  3852 attaacactaaaataacgaagtgtattttttcagtttttcttcctattataccctcattttaatctaacaatatattccttttttttttgcacacacttt 3951  T
Q  236 atctttccaataaatttaatatgttatatttctctcgtaacaaac 280  Q
     |||||||||||||||||| ||||||| |||||||||||||||||    
T  3952 ctctttccaataaatttaacatgttatttttctctcgtaacaaac 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 138 - 315
Target Start/End: Original strand, 5619 - 5798
Alignment:
Q  138 attaacatcaaaatagcgatgtgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattctta--ttttttgcacacacttt 235  Q
    ||||||||||||||||| | |||||||||| ||| || |||||| |||||||| |||||||||| ||| | || |||| ||  |||||||||||||||||    
T  5619 attaacatcaaaatagcaaagtgtatttttgcacattttcttccaattataccatcattttaattcactaatatattcctaatttttttgcacacacttt 5718  T
Q  236 atctttccaataaatttaatatgttatatttctctcgtaacaaacgattgtcaattattatatttttcttcagcaaattc 315  Q
     ||||| |||||||||||||||||||| ||||||| |||||||||  |||| | ||| ||| ||||||| || |||||||    
T  5719 ctcttttcaataaatttaatatgttatttttctcttgtaacaaacatttgttagttactatctttttctccaacaaattc 5798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 3910 - 3809
Alignment:
Q  177 cttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatatttctctcgtaac 276  Q
    ||||||||| |||  |||||||||||||||| |||| |||| |||||| |||||||||| ||||||| |||||||||||||||||| ||| |||| ||||    
T  3910 cttcctattttacattcattttaatccaccaataaaatcttttttttt-cacacactttctctttccgataaatttaatatgttatctttgtctcataac 3812  T
Q  277 aaa 279  Q
    |||    
T  3811 aaa 3809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 788 - 707
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgt 259  Q
    ||||||||||||||||| ||||||| || | ||| ||| | ||||||||| ||| |||||||||||||||||||||||||||    
T  788 ttcctattataccctcaatttaatctactaataatttccttttttttgcaaacattttatctttccaataaatttaatatgt 707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Complemental strand, 639 - 603
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  639 tctctcataacaaacaattttcaattttctaaatatt 603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 45977 - 46060
Alignment:
Q  178 ttcctattataccctcattttaatccaccattaaattcttatttt--ttgcacacactttatctttccaataaatttaatatgt 259  Q
    |||||||| |||||||| ||||||| || | ||| ||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  45977 ttcctattgtaccctcaatttaatctacgaataatttctttttttttttgcacacattttatctttccaataaatttaatatgt 46060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 46128 - 46164
Alignment:
Q  334 tctctcataacaaacaattgttaattttctaaatatt 370  Q
    ||||||||||||||||||| | |||||||||||||||    
T  46128 tctctcataacaaacaattttcaattttctaaatatt 46164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 48529 - 48629
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaa-attcttattttttgcacacactttatctttccaataaatttaatat 257  Q
    ||||||||||||| || | ||| |||||||||||||||||||||||  | |||  ||||  ||||||||||||||| ||| ||| |||||||||||||||    
T  48529 tgtatttttacacatttttttc-tattataccctcattttaatccattaataattttctatttttttgcacacactatattttttcaataaatttaatat 48627  T
Q  258 gt 259  Q
    ||    
T  48628 gt 48629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 5518 - 5431
Alignment:
Q  179 tcctattataccctcattttaatccaccattaaattcttattttttgcacacactttatctttccaataaatttaatatgttatattt 266  Q
    ||||||||||||||| |||||||||| || |||| || ||||||||||| |   ||| ||||| ||||||||| | ||||||||||||    
T  5518 tcctattataccctcgttttaatccatcaataaaatcatattttttgcagaggttttctcttttcaataaattaattatgttatattt 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 184639 - 184574
Alignment:
Q  159 tgtatttttacacgttatcttcctattataccctcattttaatccaccattaaattcttatttttt 224  Q
    ||||||||| ||| || | || |||||||||||||||||||||| |||| ||||||| ||||||||    
T  184639 tgtatttttgcacattttttttctattataccctcattttaatctaccaataaattcatatttttt 184574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University