View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7550_low_92 (Length: 238)

Name: NF7550_low_92
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7550_low_92
NF7550_low_92
[»] chr1 (6 HSPs)
chr1 (76-117)||(3309164-3309205)
chr1 (78-117)||(1547303-1547342)
chr1 (76-117)||(14758057-14758098)
chr1 (76-117)||(16415661-16415702)
chr1 (76-117)||(38823230-38823271)
chr1 (76-116)||(27533099-27533139)
[»] scaffold0009 (1 HSPs)
scaffold0009 (76-117)||(42368-42409)
[»] chr5 (6 HSPs)
chr5 (76-117)||(25501040-25501081)
chr5 (76-111)||(9200259-9200294)
chr5 (76-117)||(8466765-8466806)
chr5 (76-117)||(8742001-8742042)
chr5 (76-116)||(15724511-15724551)
chr5 (76-112)||(27330331-27330367)
[»] chr4 (7 HSPs)
chr4 (76-117)||(7703537-7703578)
chr4 (76-113)||(4598017-4598054)
chr4 (76-117)||(23761092-23761133)
chr4 (76-117)||(34948247-34948288)
chr4 (76-117)||(38011874-38011915)
chr4 (76-112)||(17272036-17272072)
chr4 (76-112)||(29584348-29584384)
[»] chr8 (5 HSPs)
chr8 (78-117)||(1204946-1204985)
chr8 (76-117)||(13307642-13307683)
chr8 (76-117)||(16447005-16447046)
chr8 (76-117)||(37970649-37970690)
chr8 (76-117)||(38643997-38644038)
[»] chr3 (4 HSPs)
chr3 (76-115)||(45174516-45174555)
chr3 (76-117)||(11357489-11357530)
chr3 (76-117)||(46297886-46297927)
chr3 (76-117)||(52041047-52041088)
[»] chr2 (3 HSPs)
chr2 (78-116)||(31570878-31570916)
chr2 (76-117)||(19424770-19424811)
chr2 (76-117)||(41465529-41465570)
[»] chr7 (8 HSPs)
chr7 (76-117)||(5657606-5657647)
chr7 (76-117)||(15612883-15612924)
chr7 (76-117)||(22687234-22687275)
chr7 (76-117)||(25691670-25691711)
chr7 (76-117)||(26524452-26524493)
chr7 (76-117)||(48928421-48928462)
chr7 (76-117)||(48928688-48928729)
chr7 (76-116)||(33688387-33688426)
[»] chr6 (3 HSPs)
chr6 (76-117)||(4318946-4318987)
chr6 (76-117)||(8513253-8513294)
chr6 (76-117)||(30353481-30353522)


Alignment Details
Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 3309205 - 3309164
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  3309205 tgatgttatagtgttaactttaccagaaaagtcattctcatg 3309164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 1547342 - 1547303
Alignment:
Q  78 atgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  1547342 atgttatagtgttaacttcaccagaaaagtcattctcatg 1547303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 14758098 - 14758057
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  14758098 tgatgttatagtgttgacttcaccagaaaagtcattctcatg 14758057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 16415702 - 16415661
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  16415702 tgatgctatagtgttaacttcaccagaaaagtcattctcatg 16415661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 38823271 - 38823230
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  38823271 tgatgctatagtgttaacttaaccagaaaagtcattctcatg 38823230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 27533099 - 27533139
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcat 116  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  27533099 tgatgctatagtgttaacttcaccagaaaagtcattctcat 27533139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 42409 - 42368
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  42409 tgatgttatagtgttaacttcaccagaaaaattattctcatg 42368  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 25501040 - 25501081
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  25501040 tgatgctatagtgttaactttaccagaaaagtcattctcatg 25501081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 9200294 - 9200259
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttatt 111  Q
    |||||||||||||||||||| |||||||||||||||    
T  9200294 tgatgttatagtgttaacttcaccagaaaagttatt 9200259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 8466806 - 8466765
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||| ||||||||||| ||||||||||| |||||||||    
T  8466806 tgatgttacagtgttaacttcaccagaaaagtcattctcatg 8466765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 8742001 - 8742042
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  8742001 tgatgctatagtgttaacttcaccagaaaagtcattctcatg 8742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 15724551 - 15724511
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcat 116  Q
    |||||||||||||||||||| |||| |||||| ||||||||    
T  15724551 tgatgttatagtgttaacttcaccaaaaaagtcattctcat 15724511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 27330367 - 27330331
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattc 112  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  27330367 tgatgttatagtgttaacttcaccagaaaagtcattc 27330331  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 7703578 - 7703537
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  7703578 tgatgttatagtgttaacttcaccagaaaagtcattctcatg 7703537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 4598054 - 4598017
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattct 113  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  4598054 tgatgttatagtgttaacttcaccagaaaagtcattct 4598017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 23761133 - 23761092
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||||||||||| |||| ||| |||||||||    
T  23761133 tgatgttatagtgttaactttacaagaatagtcattctcatg 23761092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 34948247 - 34948288
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||||||||  |||||||||| |||||||||    
T  34948247 tgatgttatagtgttaacttcgccagaaaagtcattctcatg 34948288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 38011915 - 38011874
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  38011915 tgatgttatagtgttgacttcaccagaaaagtcattctcatg 38011874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 17272072 - 17272036
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattc 112  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  17272072 tgatgttatagtgttaacttcaccagaaaagtcattc 17272036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 29584348 - 29584384
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattc 112  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  29584348 tgatgttatagtgttaacttcaccagaaaagtcattc 29584384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 1204985 - 1204946
Alignment:
Q  78 atgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  1204985 atgttatagtgttaacttcaccagaaaagtcattctcatg 1204946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 13307683 - 13307642
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| ||||||||| | |||||||||    
T  13307683 tgatgttatagtgttaacttcaccagaaaaatcattctcatg 13307642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 16447005 - 16447046
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||||| ||||||||| ||| |||||    
T  16447005 tgatgttatagtgttaactttatcagaaaagtcattttcatg 16447046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 37970649 - 37970690
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  37970649 tgatgttatagtgttaacttcaccaaaaaagtcattctcatg 37970690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 38644038 - 38643997
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  38644038 tgatgttatagtgttaacttgaccaaaaaagtcattctcatg 38643997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 45174555 - 45174516
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctca 115  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  45174555 tgatgttatagtgttaacttcaccaaaaaagttattctca 45174516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 11357489 - 11357530
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  11357489 tgatgctatagtgttaacttcaccagaaaagtcattctcatg 11357530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 46297886 - 46297927
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| ||||||||||| ||| |||||    
T  46297886 tgatgttatagtgttaacttcaccagaaaagtcattttcatg 46297927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 52041047 - 52041088
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||| ||||||| ||||||||||| |||||||||    
T  52041047 tgatgttatagtattaacttcaccagaaaagtcattctcatg 52041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 31570878 - 31570916
Alignment:
Q  78 atgttatagtgttaactttaccagaaaagttattctcat 116  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  31570878 atgttatagtgttaatttcaccagaaaagttattctcat 31570916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 19424770 - 19424811
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| ||||||||||  |||||||||    
T  19424770 tgatgttatagtgttaacttcaccagaaaagccattctcatg 19424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 41465570 - 41465529
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  41465570 tgatgctatagtgttaacttcaccagaaaagtcattctcatg 41465529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.00000008; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 5657606 - 5657647
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| || |||||||| |||||||||    
T  5657606 tgatgttatagtgttaacttcactagaaaagtcattctcatg 5657647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 15612883 - 15612924
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  15612883 tgatgttatagtgttaacttcacaagaaacgttattctcatg 15612924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 22687275 - 22687234
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| | ||||||||| |||||||||    
T  22687275 tgatgttatagtgttaacttcatcagaaaagtcattctcatg 22687234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 25691670 - 25691711
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| || |||||||| |||||||||    
T  25691670 tgatgttatagtgttaacttcacgagaaaagtcattctcatg 25691711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 26524452 - 26524493
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||| | ||||||||||| |||||||||    
T  26524452 tgatgttatagtgttaacatcaccagaaaagtcattctcatg 26524493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 48928421 - 48928462
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  48928421 tgatgttatagtgttgacttcaccagaaaagtcattctcatg 48928462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 48928688 - 48928729
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  48928688 tgatgttatagtgttgacttcaccagaaaagtcattctcatg 48928729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 33688387 - 33688426
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcat 116  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  33688387 tgatgttatagtgttaac-ttaccagaaaagtcattctcat 33688426  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 4318946 - 4318987
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  4318946 tgatgttatagtgttaacttcaccaaaaaagtcattctcatg 4318987  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 8513294 - 8513253
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||| ||||||||||||||| ||||||||||| |||||||||    
T  8513294 tgatattatagtgttaacttcaccagaaaagtcattctcatg 8513253  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 30353481 - 30353522
Alignment:
Q  76 tgatgttatagtgttaactttaccagaaaagttattctcatg 117  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  30353481 tgatgttataatgttaacttcaccagaaaagtcattctcatg 30353522  T

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