View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7550_low_96 (Length: 230)
Name: NF7550_low_96
Description: NF7550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7550_low_96 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 32819706 - 32819922
Alignment:
| Q |
1 |
tgctaactcacctctcttcatatctatatgagacctactactaccatttcccccaattgaactcaaattgtaaccagttttcttgctatgactgcgtttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32819706 |
tgctaactcacctctcttcatatctatatgagacctactactaccatttcccccaattgaactcaaattgtaaccagttttcttgctatgactgcgtttc |
32819805 |
T |
|
| Q |
101 |
aacttctccgacaaattcacctcaacattaatcaagctagacgccgaaccacattcattttgcacgagtggcgaaccttcacagttaccaatcccaaggc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32819806 |
aacttctccgacaaattcacctcaacattaatcaagctagacgccgaaccacattcattttgcacgagtggcgaaccttcacagttaccaatcccaaggc |
32819905 |
T |
|
| Q |
201 |
catccttcctcacagta |
217 |
Q |
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||||||||||||||||| |
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| T |
32819906 |
catccttcctcacagta |
32819922 |
T |
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