View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7551_high_23 (Length: 250)
Name: NF7551_high_23
Description: NF7551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7551_high_23 |
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Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32346364 - 32346603
Alignment:
| Q |
1 |
acactatataatcaattctagtcagcatacaaaattagttagaaaaagtaaatttagaagcattcatcttgtcaaagaatcagctctgtaaagcatagtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32346364 |
acactatataatcaattctagtcagcatacaaaattagttaggaaaagtaaatttagaagcattcatcttgtcaaagaatcagctctggaaagcatagtg |
32346463 |
T |
|
| Q |
101 |
aatgaaagcattatccgtagctctaatcttcggtactacnnnnnnngcatctaatatattggtaaacaagcatatgtccaagatatttattaaacatatg |
200 |
Q |
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||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32346464 |
aatgaaagcattatctgtagctctaatcttcggtactacaaaaaaagcatctaacatattggtaaacaagcatatgtccaagatatttattaaacatatg |
32346563 |
T |
|
| Q |
201 |
ataaagtttatgacgaatcaagtgtctcacagtttcatct |
240 |
Q |
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||| |||||||||||||||||||||||||||||| ||||| |
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| T |
32346564 |
atagagtttatgacgaatcaagtgtctcacagttccatct |
32346603 |
T |
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