View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7551_low_15 (Length: 311)

Name: NF7551_low_15
Description: NF7551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7551_low_15
NF7551_low_15
[»] chr2 (71 HSPs)
chr2 (13-299)||(21834772-21835062)
chr2 (102-278)||(16519070-16519245)
chr2 (102-278)||(11514968-11515144)
chr2 (159-278)||(11522161-11522280)
chr2 (161-278)||(26905787-26905904)
chr2 (102-278)||(13018459-13018635)
chr2 (142-278)||(37194231-37194367)
chr2 (102-225)||(4003352-4003475)
chr2 (161-278)||(28539407-28539523)
chr2 (161-278)||(43572525-43572642)
chr2 (161-278)||(21626106-21626225)
chr2 (102-229)||(1364757-1364884)
chr2 (140-267)||(26599241-26599368)
chr2 (163-278)||(35550139-35550253)
chr2 (102-228)||(15803113-15803238)
chr2 (160-273)||(567369-567481)
chr2 (162-278)||(34757589-34757706)
chr2 (161-278)||(40211986-40212103)
chr2 (102-278)||(8555757-8555933)
chr2 (102-278)||(13765920-13766095)
chr2 (142-278)||(39204980-39205117)
chr2 (161-276)||(9087448-9087562)
chr2 (159-278)||(31584747-31584865)
chr2 (102-229)||(6656042-6656171)
chr2 (184-277)||(10165421-10165512)
chr2 (143-276)||(9087681-9087812)
chr2 (102-225)||(36870189-36870310)
chr2 (103-278)||(8410911-8411086)
chr2 (184-278)||(18826207-18826301)
chr2 (102-226)||(15555378-15555502)
chr2 (106-225)||(16625818-16625934)
chr2 (141-226)||(30072095-30072179)
chr2 (102-278)||(31082740-31082905)
chr2 (201-278)||(35412202-35412279)
chr2 (102-221)||(36030738-36030856)
chr2 (103-278)||(36567259-36567434)
chr2 (167-278)||(3038928-3039038)
chr2 (195-278)||(4041981-4042064)
chr2 (104-278)||(25960591-25960765)
chr2 (184-278)||(43334813-43334907)
chr2 (185-278)||(8990944-8991037)
chr2 (106-274)||(12941783-12941953)
chr2 (102-191)||(44954064-44954152)
chr2 (102-277)||(5322111-5322275)
chr2 (186-278)||(18780392-18780484)
chr2 (102-278)||(19382802-19382977)
chr2 (102-229)||(30312435-30312562)
chr2 (167-278)||(40357446-40357557)
chr2 (195-274)||(44137152-44137231)
chr2 (102-272)||(32243399-32243568)
chr2 (184-278)||(38293895-38293988)
chr2 (102-191)||(39181003-39181091)
chr2 (182-266)||(1270695-1270779)
chr2 (193-278)||(3119833-3119917)
chr2 (157-273)||(8184147-8184260)
chr2 (237-278)||(16625785-16625826)
chr2 (167-228)||(41100136-41100196)
chr2 (161-278)||(44656731-44656846)
chr2 (231-278)||(6128835-6128881)
chr2 (150-205)||(11949878-11949932)
chr2 (102-229)||(30523171-30523297)
chr2 (102-274)||(12963956-12964129)
chr2 (232-278)||(13767472-13767518)
chr2 (170-267)||(22101592-22101687)
chr2 (233-278)||(16813679-16813724)
chr2 (233-278)||(16852958-16853003)
chr2 (156-213)||(39819876-39819932)
chr2 (111-179)||(35412278-35412346)
chr2 (156-228)||(39913234-39913305)
chr2 (159-211)||(41656691-41656742)
chr2 (161-225)||(43190573-43190637)
[»] chr8 (52 HSPs)
chr8 (102-278)||(39193855-39194031)
chr8 (102-278)||(1839801-1839976)
chr8 (102-278)||(21173839-21174014)
chr8 (159-278)||(27085330-27085448)
chr8 (156-267)||(40985066-40985177)
chr8 (102-228)||(79644-79770)
chr8 (102-276)||(36906111-36906285)
chr8 (160-278)||(43733101-43733219)
chr8 (161-278)||(12506177-12506294)
chr8 (161-278)||(13227693-13227810)
chr8 (103-274)||(31297333-31297503)
chr8 (161-275)||(43239653-43239766)
chr8 (102-278)||(34272439-34272615)
chr8 (102-278)||(25033304-25033480)
chr8 (103-278)||(13865073-13865247)
chr8 (159-254)||(44879528-44879622)
chr8 (159-254)||(44880299-44880393)
chr8 (111-229)||(23932588-23932705)
chr8 (102-278)||(6742-6919)
chr8 (193-278)||(1942034-1942119)
chr8 (159-278)||(10589785-10589904)
chr8 (107-278)||(29611921-29612091)
chr8 (102-212)||(4166689-4166799)
chr8 (102-228)||(28416192-28416315)
chr8 (161-227)||(41866149-41866215)
chr8 (102-278)||(2474748-2474923)
chr8 (159-278)||(41455238-41455359)
chr8 (102-278)||(4734477-4734653)
chr8 (142-278)||(36102871-36103007)
chr8 (161-225)||(43007701-43007765)
chr8 (159-249)||(39418036-39418124)
chr8 (233-278)||(31149957-31150002)
chr8 (185-274)||(37659516-37659605)
chr8 (237-278)||(43007757-43007798)
chr8 (102-213)||(1840244-1840362)
chr8 (171-278)||(7079975-7080079)
chr8 (102-249)||(34304640-34304784)
chr8 (145-228)||(35376658-35376742)
chr8 (162-269)||(13369902-13370009)
chr8 (161-228)||(26772673-26772740)
chr8 (159-213)||(5911472-5911525)
chr8 (233-279)||(6943446-6943492)
chr8 (235-273)||(12595370-12595408)
chr8 (233-278)||(15108245-15108290)
chr8 (156-276)||(23702463-23702580)
chr8 (237-278)||(29584233-29584274)
chr8 (193-278)||(34349730-34349815)
chr8 (234-274)||(1111120-1111160)
chr8 (238-278)||(3404555-3404595)
chr8 (234-278)||(4873223-4873267)
chr8 (162-246)||(13406412-13406495)
chr8 (234-278)||(23963031-23963075)
[»] chr3 (72 HSPs)
chr3 (102-278)||(32858755-32858930)
chr3 (102-278)||(29623162-29623336)
chr3 (102-278)||(35283012-35283187)
chr3 (111-278)||(33944621-33944787)
chr3 (113-276)||(53888422-53888585)
chr3 (108-278)||(517613-517780)
chr3 (102-229)||(33908979-33909105)
chr3 (102-278)||(50948129-50948306)
chr3 (142-276)||(45570926-45571060)
chr3 (102-274)||(3537132-3537302)
chr3 (161-278)||(51686490-51686606)
chr3 (102-274)||(45555557-45555729)
chr3 (102-278)||(49860760-49860936)
chr3 (102-278)||(47789427-47789603)
chr3 (156-228)||(1132956-1133028)
chr3 (102-278)||(5939762-5939938)
chr3 (102-278)||(41961958-41962132)
chr3 (102-278)||(43237215-43237390)
chr3 (111-228)||(38639522-38639639)
chr3 (102-278)||(47714654-47714829)
chr3 (142-278)||(49183660-49183785)
chr3 (102-278)||(24242073-24242249)
chr3 (163-274)||(27197237-27197348)
chr3 (159-278)||(48444488-48444605)
chr3 (156-278)||(21777617-21777739)
chr3 (102-226)||(30995795-30995918)
chr3 (161-226)||(53664632-53664697)
chr3 (161-229)||(25754132-25754200)
chr3 (102-278)||(30131867-30132043)
chr3 (102-218)||(37674181-37674297)
chr3 (102-278)||(55439508-55439684)
chr3 (159-205)||(22225347-22225393)
chr3 (160-278)||(36637782-36637900)
chr3 (184-278)||(39499204-39499298)
chr3 (161-275)||(41099712-41099824)
chr3 (102-275)||(46312404-46312578)
chr3 (102-227)||(44400634-44400758)
chr3 (102-278)||(46891311-46891486)
chr3 (233-278)||(47359364-47359409)
chr3 (103-228)||(49855839-49855963)
chr3 (160-280)||(19793442-19793562)
chr3 (102-278)||(23163448-23163623)
chr3 (163-227)||(35989102-35989165)
chr3 (142-218)||(40118925-40119001)
chr3 (198-278)||(40674127-40674207)
chr3 (142-278)||(49682983-49683118)
chr3 (156-278)||(15499280-15499402)
chr3 (159-229)||(27681789-27681859)
chr3 (142-278)||(38526117-38526253)
chr3 (111-229)||(48908904-48909021)
chr3 (233-278)||(2420714-2420759)
chr3 (102-263)||(3043114-3043275)
chr3 (159-278)||(11500085-11500201)
chr3 (233-278)||(34306653-34306698)
chr3 (191-271)||(36598262-36598342)
chr3 (165-226)||(50535135-50535196)
chr3 (161-229)||(21835598-21835666)
chr3 (102-278)||(44412136-44412311)
chr3 (159-227)||(50345679-50345746)
chr3 (162-267)||(3333848-3333953)
chr3 (159-221)||(3458324-3458385)
chr3 (236-278)||(27055885-27055927)
chr3 (153-227)||(33281738-33281812)
chr3 (236-278)||(47434301-47434343)
chr3 (156-225)||(54126260-54126327)
chr3 (102-278)||(17642514-17642689)
chr3 (197-278)||(27921981-27922061)
chr3 (237-278)||(33982720-33982761)
chr3 (102-251)||(36796347-36796496)
chr3 (234-275)||(37545234-37545275)
chr3 (193-278)||(38592968-38593052)
chr3 (156-228)||(24588314-24588386)
[»] chr4 (71 HSPs)
chr4 (111-278)||(12708815-12708982)
chr4 (111-278)||(30198752-30198919)
chr4 (102-229)||(35959120-35959247)
chr4 (143-278)||(42650601-42650736)
chr4 (102-278)||(16535615-16535791)
chr4 (159-278)||(11976818-11976937)
chr4 (111-278)||(38136815-38136982)
chr4 (103-229)||(46176957-46177083)
chr4 (102-278)||(16318541-16318717)
chr4 (102-278)||(31529943-31530119)
chr4 (111-278)||(28175445-28175612)
chr4 (111-228)||(29114264-29114381)
chr4 (102-278)||(38317209-38317386)
chr4 (102-278)||(41363793-41363969)
chr4 (163-278)||(8827801-8827915)
chr4 (159-278)||(46669926-46670045)
chr4 (102-229)||(49668134-49668260)
chr4 (107-278)||(52636690-52636858)
chr4 (102-278)||(13269877-13270053)
chr4 (102-278)||(7182172-7182348)
chr4 (159-278)||(9119768-9119885)
chr4 (102-241)||(21081274-21081413)
chr4 (102-276)||(56504452-56504625)
chr4 (156-270)||(42759640-42759754)
chr4 (107-228)||(45823484-45823605)
chr4 (102-278)||(24279838-24280014)
chr4 (146-225)||(52430589-52430668)
chr4 (146-228)||(13984995-13985077)
chr4 (184-278)||(20533933-20534027)
chr4 (102-278)||(33500444-33500620)
chr4 (184-278)||(41844441-41844535)
chr4 (141-219)||(44076567-44076644)
chr4 (161-254)||(45971544-45971636)
chr4 (103-271)||(904122-904290)
chr4 (102-278)||(13270256-13270430)
chr4 (182-270)||(15498783-15498870)
chr4 (159-267)||(21443004-21443111)
chr4 (108-229)||(368001-368119)
chr4 (160-278)||(47669792-47669910)
chr4 (185-278)||(3126993-3127085)
chr4 (193-278)||(32648985-32649070)
chr4 (185-278)||(49404604-49404697)
chr4 (159-278)||(27143158-27143278)
chr4 (159-274)||(32866716-32866829)
chr4 (102-225)||(37756747-37756870)
chr4 (102-205)||(48620204-48620306)
chr4 (102-212)||(54205760-54205873)
chr4 (176-278)||(7485815-7485917)
chr4 (185-275)||(17622456-17622545)
chr4 (161-277)||(30307356-30307468)
chr4 (233-275)||(55509932-55509974)
chr4 (139-228)||(516025-516114)
chr4 (170-270)||(15451325-15451422)
chr4 (102-278)||(48830795-48830972)
chr4 (185-278)||(52594607-52594698)
chr4 (102-278)||(21296086-21296262)
chr4 (159-226)||(4442012-4442079)
chr4 (159-274)||(25843825-25843939)
chr4 (161-228)||(45899379-45899444)
chr4 (232-278)||(28880045-28880091)
chr4 (159-205)||(29576189-29576234)
chr4 (236-278)||(32060704-32060746)
chr4 (236-278)||(32948507-32948549)
chr4 (159-213)||(47063674-47063727)
chr4 (156-218)||(49936493-49936555)
chr4 (237-278)||(40423054-40423095)
chr4 (159-227)||(18396190-18396258)
chr4 (238-278)||(20896375-20896415)
chr4 (169-225)||(36553831-36553887)
chr4 (193-229)||(48620312-48620348)
chr4 (198-278)||(52554980-52555060)
[»] chr7 (64 HSPs)
chr7 (102-280)||(42112938-42113114)
chr7 (161-278)||(2826228-2826345)
chr7 (102-278)||(38505325-38505491)
chr7 (159-267)||(13697263-13697371)
chr7 (111-278)||(16805548-16805715)
chr7 (102-278)||(15748930-15749106)
chr7 (102-278)||(1277863-1278038)
chr7 (102-278)||(23620774-23620950)
chr7 (161-278)||(30080955-30081072)
chr7 (161-278)||(33872101-33872209)
chr7 (102-278)||(28437523-28437699)
chr7 (102-278)||(3658492-3658668)
chr7 (102-278)||(33406613-33406789)
chr7 (102-278)||(42620333-42620508)
chr7 (159-278)||(4787984-4788101)
chr7 (159-278)||(23550769-23550887)
chr7 (102-228)||(38137865-38137991)
chr7 (167-278)||(41002232-41002343)
chr7 (142-278)||(6746560-6746686)
chr7 (140-220)||(44487356-44487437)
chr7 (115-278)||(31891223-31891376)
chr7 (159-274)||(7391395-7391508)
chr7 (159-274)||(23772524-23772639)
chr7 (162-229)||(31055359-31055425)
chr7 (159-278)||(42266988-42267106)
chr7 (108-278)||(43778556-43778727)
chr7 (161-278)||(43348220-43348327)
chr7 (161-227)||(43741688-43741754)
chr7 (102-278)||(3571740-3571916)
chr7 (102-278)||(5968034-5968200)
chr7 (159-264)||(32820227-32820330)
chr7 (161-225)||(17818289-17818353)
chr7 (156-274)||(21018682-21018797)
chr7 (102-277)||(34652035-34652208)
chr7 (102-227)||(31179999-31180125)
chr7 (162-229)||(42253942-42254009)
chr7 (161-228)||(45940431-45940498)
chr7 (142-228)||(4058170-4058256)
chr7 (159-221)||(30301962-30302023)
chr7 (160-278)||(33187828-33187944)
chr7 (161-278)||(32650372-32650489)
chr7 (158-222)||(46611864-46611928)
chr7 (144-278)||(23465981-23466112)
chr7 (102-278)||(33113620-33113798)
chr7 (160-278)||(12624355-12624472)
chr7 (232-278)||(14676284-14676330)
chr7 (13-47)||(23087131-23087165)
chr7 (217-278)||(38235835-38235894)
chr7 (236-278)||(43188915-43188957)
chr7 (237-278)||(17818345-17818386)
chr7 (233-278)||(30081423-30081468)
chr7 (161-226)||(34670179-34670244)
chr7 (237-278)||(35264873-35264914)
chr7 (111-188)||(38987329-38987406)
chr7 (237-278)||(43665150-43665191)
chr7 (159-228)||(43741328-43741397)
chr7 (242-278)||(4126025-4126061)
chr7 (242-278)||(10591885-10591921)
chr7 (162-274)||(22556686-22556797)
chr7 (233-273)||(24924576-24924616)
chr7 (156-228)||(24924611-24924682)
chr7 (238-278)||(25335367-25335407)
chr7 (142-254)||(38233741-38233852)
chr7 (233-277)||(41471493-41471537)
[»] chr1 (80 HSPs)
chr1 (102-268)||(7915437-7915603)
chr1 (102-278)||(5584429-5584605)
chr1 (102-275)||(36269667-36269840)
chr1 (102-278)||(36886794-36886969)
chr1 (159-278)||(24436913-24437032)
chr1 (111-278)||(37649597-37649764)
chr1 (111-278)||(41817280-41817446)
chr1 (111-278)||(46001500-46001666)
chr1 (105-225)||(49102986-49103105)
chr1 (161-278)||(2909101-2909218)
chr1 (144-278)||(41432743-41432880)
chr1 (102-229)||(17556592-17556718)
chr1 (111-278)||(29092020-29092186)
chr1 (102-228)||(52073479-52073604)
chr1 (102-278)||(27499908-27500084)
chr1 (102-278)||(47905670-47905846)
chr1 (159-278)||(33854820-33854938)
chr1 (159-278)||(33925984-33926102)
chr1 (103-278)||(33991466-33991641)
chr1 (103-228)||(28848820-28848944)
chr1 (102-278)||(13255268-13255444)
chr1 (108-228)||(17760506-17760626)
chr1 (141-277)||(34738280-34738415)
chr1 (161-229)||(52068167-52068235)
chr1 (159-274)||(12625809-12625923)
chr1 (102-275)||(1688201-1688373)
chr1 (102-278)||(23871444-23871620)
chr1 (102-278)||(39889639-39889815)
chr1 (111-278)||(43036304-43036459)
chr1 (102-278)||(33324558-33324723)
chr1 (161-274)||(25561303-25561414)
chr1 (156-273)||(33643611-33643728)
chr1 (107-275)||(37955104-37955275)
chr1 (159-228)||(42333626-42333694)
chr1 (102-191)||(50586972-50587060)
chr1 (186-278)||(896476-896568)
chr1 (102-278)||(42162034-42162210)
chr1 (103-226)||(47742456-47742580)
chr1 (156-278)||(18937303-18937425)
chr1 (111-278)||(36385275-36385439)
chr1 (161-278)||(39886905-39887024)
chr1 (159-278)||(41427975-41428093)
chr1 (102-278)||(17688262-17688439)
chr1 (102-228)||(27255133-27255259)
chr1 (142-228)||(34154359-34154445)
chr1 (102-278)||(38794894-38795071)
chr1 (185-278)||(39508777-39508870)
chr1 (102-278)||(2925916-2926091)
chr1 (102-263)||(11017523-11017682)
chr1 (162-226)||(33579219-33579282)
chr1 (167-278)||(47206405-47206515)
chr1 (161-275)||(4204763-4204876)
chr1 (184-278)||(7963980-7964074)
chr1 (184-278)||(14153118-14153211)
chr1 (184-278)||(42488608-42488702)
chr1 (142-271)||(50247559-50247689)
chr1 (160-254)||(51303181-51303275)
chr1 (143-220)||(10618779-10618855)
chr1 (102-226)||(5970464-5970587)
chr1 (159-227)||(35619536-35619604)
chr1 (218-278)||(38795387-38795447)
chr1 (161-217)||(40243354-40243410)
chr1 (104-227)||(51246595-51246718)
chr1 (184-278)||(8156318-8156413)
chr1 (237-280)||(36325774-36325817)
chr1 (171-278)||(50084118-50084224)
chr1 (156-254)||(1278451-1278549)
chr1 (142-278)||(12293774-12293912)
chr1 (184-278)||(13061378-13061471)
chr1 (236-278)||(32299160-32299202)
chr1 (161-278)||(50226023-50226130)
chr1 (239-280)||(50587095-50587136)
chr1 (161-269)||(69717-69824)
chr1 (238-278)||(6015491-6015531)
chr1 (156-212)||(23412000-23412056)
chr1 (102-274)||(26757140-26757312)
chr1 (195-275)||(32287597-32287677)
chr1 (159-227)||(34750037-34750105)
chr1 (177-229)||(43529971-43530022)
chr1 (159-227)||(50097609-50097676)
[»] scaffold0248 (1 HSPs)
scaffold0248 (108-278)||(177-346)
[»] scaffold0136 (1 HSPs)
scaffold0136 (102-278)||(2004-2179)
[»] scaffold0128 (1 HSPs)
scaffold0128 (111-278)||(26312-26480)
[»] scaffold0053 (1 HSPs)
scaffold0053 (102-278)||(29169-29344)
[»] chr6 (39 HSPs)
chr6 (102-278)||(1029217-1029393)
chr6 (161-275)||(32221986-32222099)
chr6 (102-278)||(1567205-1567381)
chr6 (102-278)||(4909896-4910072)
chr6 (161-278)||(12779497-12779613)
chr6 (161-274)||(33590314-33590425)
chr6 (111-228)||(32719407-32719523)
chr6 (102-278)||(26713787-26713953)
chr6 (102-278)||(24734806-24734980)
chr6 (102-278)||(26481112-26481284)
chr6 (142-278)||(23095109-23095245)
chr6 (102-274)||(29241818-29241990)
chr6 (167-278)||(26574376-26574487)
chr6 (184-278)||(5825339-5825432)
chr6 (157-274)||(15615646-15615763)
chr6 (161-274)||(24874920-24875031)
chr6 (145-280)||(27793586-27793720)
chr6 (159-276)||(4089380-4089496)
chr6 (161-278)||(22788501-22788615)
chr6 (193-278)||(31345352-31345436)
chr6 (159-278)||(2502347-2502467)
chr6 (142-226)||(20820563-20820647)
chr6 (159-225)||(4464927-4464992)
chr6 (102-228)||(11180190-11180315)
chr6 (156-228)||(13380518-13380591)
chr6 (156-225)||(24379615-24379684)
chr6 (161-226)||(28551919-28551983)
chr6 (159-267)||(33677004-33677113)
chr6 (159-227)||(33212313-33212380)
chr6 (234-278)||(33755095-33755139)
chr6 (174-229)||(33184194-33184248)
chr6 (200-254)||(17443967-17444021)
chr6 (159-201)||(25073304-25073346)
chr6 (233-278)||(19477311-19477356)
chr6 (233-274)||(25072516-25072557)
chr6 (217-278)||(34914666-34914727)
chr6 (177-229)||(6688066-6688117)
chr6 (159-267)||(22817333-22817440)
chr6 (234-278)||(26289607-26289651)
[»] chr5 (48 HSPs)
chr5 (102-278)||(35683454-35683630)
chr5 (102-275)||(39649495-39649668)
chr5 (107-278)||(15974269-15974440)
chr5 (142-278)||(6491149-6491284)
chr5 (163-278)||(6373123-6373237)
chr5 (161-278)||(13569346-13569463)
chr5 (142-278)||(38568358-38568484)
chr5 (102-278)||(27480153-27480327)
chr5 (102-228)||(10437910-10438036)
chr5 (107-228)||(5772751-5772871)
chr5 (150-273)||(29022592-29022712)
chr5 (102-263)||(35700984-35701145)
chr5 (142-278)||(37508371-37508508)
chr5 (159-267)||(3938123-3938230)
chr5 (143-275)||(10955674-10955806)
chr5 (183-278)||(17092902-17092997)
chr5 (111-229)||(10842978-10843095)
chr5 (102-274)||(1658101-1658273)
chr5 (102-278)||(26149527-26149703)
chr5 (102-278)||(35708743-35708909)
chr5 (102-278)||(38928683-38928859)
chr5 (102-274)||(39428868-39429037)
chr5 (102-278)||(41694901-41695077)
chr5 (156-278)||(19389809-19389920)
chr5 (193-278)||(1935088-1935174)
chr5 (156-213)||(5836866-5836923)
chr5 (142-278)||(14570031-14570157)
chr5 (108-225)||(43496895-43497010)
chr5 (160-275)||(3676499-3676604)
chr5 (148-228)||(3925812-3925891)
chr5 (102-278)||(10295407-10295583)
chr5 (111-274)||(3081317-3081477)
chr5 (231-278)||(41923211-41923258)
chr5 (156-229)||(9684811-9684884)
chr5 (102-278)||(2020905-2021080)
chr5 (159-263)||(6632630-6632734)
chr5 (161-229)||(12229493-12229561)
chr5 (175-278)||(39011829-39011932)
chr5 (232-278)||(17668115-17668161)
chr5 (102-208)||(21916344-21916450)
chr5 (233-274)||(18675708-18675749)
chr5 (233-278)||(37909046-37909091)
chr5 (161-278)||(39027723-39027839)
chr5 (237-278)||(43496862-43496903)
chr5 (159-227)||(1977963-1978030)
chr5 (166-278)||(8944035-8944145)
chr5 (143-254)||(19338579-19338690)
chr5 (156-228)||(29709501-29709573)
[»] scaffold0031 (1 HSPs)
scaffold0031 (161-278)||(93487-93604)
[»] scaffold0051 (4 HSPs)
scaffold0051 (161-278)||(6738-6855)
scaffold0051 (161-278)||(7721-7838)
scaffold0051 (148-278)||(672-801)
scaffold0051 (148-278)||(3549-3678)
[»] scaffold0028 (1 HSPs)
scaffold0028 (102-278)||(35436-35611)
[»] scaffold0274 (1 HSPs)
scaffold0274 (159-248)||(15899-15987)
[»] scaffold0119 (2 HSPs)
scaffold0119 (193-278)||(37135-37221)
scaffold0119 (182-266)||(30458-30542)
[»] scaffold0598 (1 HSPs)
scaffold0598 (193-267)||(9397-9471)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-228)||(82720-82846)
[»] scaffold0263 (1 HSPs)
scaffold0263 (233-278)||(12240-12285)
[»] scaffold0002 (1 HSPs)
scaffold0002 (142-278)||(90866-90992)
[»] scaffold0717 (1 HSPs)
scaffold0717 (195-278)||(1595-1678)
[»] scaffold0245 (1 HSPs)
scaffold0245 (156-254)||(4128-4226)
[»] scaffold0229 (1 HSPs)
scaffold0229 (156-254)||(4459-4557)
[»] scaffold1562 (1 HSPs)
scaffold1562 (193-278)||(155-240)
[»] scaffold1158 (1 HSPs)
scaffold1158 (193-278)||(2353-2438)
[»] scaffold0388 (1 HSPs)
scaffold0388 (235-275)||(7128-7168)


Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 299
Target Start/End: Original strand, 21834772 - 21835062
Alignment:
Q  13 aatatgacatattttggtccatgtagtcgaccccattcaagcattgcttgcgagtttgaaggggaatggaagggaggctttnnnnnnnn----ggaagga 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||            |||||||    
T  21834772 aatatgacatattttggtccatgtagtcgaccccattcaagcattgtttgcgagtttgaaggggaagggaagggagggtttaaaaaaaaaaaaggaagga 21834871  T
Q  109 gcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagtt 208  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21834872 gcaagtggaagaaacagaggacatcgggacggaagggctttggaggattaatttttcttcataatataaaactctcctcatttaggggaactaaaaagtt 21834971  T
Q  209 gtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgttaaacattggtttatcattctct 299  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21834972 gtattagaggagggttttgggcagttttggagggtttatatgaattaatcaaatttaatatatgttgttaaacattgatttatcattctct 21835062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 16519245 - 16519070
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| |||| |||| || |  | |||||||||| || || |||||||||||||||| ||||  |||||||||| ||| |||||    
T  16519245 ggaaggagcaagtggaagaaatagagtacattgg-aggggagggctttggtgggttgatttttcttcataatacaaaatcctcctcatttggggaaacta 16519147  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||||| |||||   |||| ||||||||||||||||| |||||||||| | ||||||||||    
T  16519146 aaaagttgtattagaggagggtattggggggtttttgagggtttatatgaattcatcaaatttattttatgttgtta 16519070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 11514968 - 11515144
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || || ||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  11514968 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 11515067  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  11515068 aaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 11515144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 11522280 - 11522161
Alignment:
Q  159 atttttcttcataa-tataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaat 257  Q
    ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||   ||| ||||||||||||||||||  |    
T  11522280 atttttcttcaaaaatataaaaccctcctcattt-ggggaactaaaaagttgtattggaggagggttttggggggtttgggagggtttatatgaattctt 11522182  T
Q  258 caaatttaatctatgttgtta 278  Q
    |||||||||| ||||||||||    
T  11522181 caaatttaatatatgttgtta 11522161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 26905787 - 26905904
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||| ||| ||||| |||||||||| | ||||||||||| ||||||| |||||||||||||||   |||||||||||| ||| |||||  ||||    
T  26905787 ttttcttcatgatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaatttttcaa 26905886  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  26905887 atttaatctatgttgtta 26905904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 13018635 - 13018459
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| ||| ||||||||||||  ||||| |  |||| || |||||||||| |  || | |||||||||||||| ||||| |||||||||| | |||||||    
T  13018635 ggaatgagtaagtggaagaaatggaggaaaatgggagaggagggctttggggagttaacttttcttcataatacaaaaccctcctcatttggaggaacta 13018536  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||  |||||| | |||||||||||||   |||||||||||| ||| |||||  ||||||||||||||||||||||    
T  13018535 aaaaaatgtattgggggagggttttggggggttttggagggttaataagaatttttcaaatttaatctatgttgtta 13018459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 37194231 - 37194367
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| |||||||||||| ||   |||||||||    
T  37194231 agggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttttgggggttttggagg 37194330  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||| |||||  ||||||||||| ||||||||||    
T  37194331 gttaataagaattcttcaaatttaatttatgttgtta 37194367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 4003352 - 4003475
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  ||||  | |||||||||| || || |||||||||||||||| |||||||||||||||| ||||||||     
T  4003352 ggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttaatttttcttcataatacaaaactctcctcatttgggggaactc 4003451  T
Q  202 aaaagttgtattagaggagggttt 225  Q
    |||| ||||||| |||||||||||    
T  4003452 aaaaattgtattggaggagggttt 4003475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 28539523 - 28539407
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||   ||||||||||||||| ||||| ||||||| ||||||| || ||| | ||||||  |||||||||||||||||||||||  ||||    
T  28539523 ttttcttcataatgctaaactctcctcatttggggga-ctaaaaaattgtattggatgagagctttgggggattttggagggtttatatgaattcttcaa 28539425  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  28539424 atttaatctatgttgtta 28539407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 43572642 - 43572525
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| |||||| ||||||||   |||||||||||| ||| |||||  ||||    
T  43572642 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagagttttggggggttttggagggttaataagaattcttcaa 43572543  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  43572542 atttaatttatgttgtta 43572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 21626106 - 21626225
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggca--attttggagggtttatatgaattaatc 258  Q
    |||||||||||||| |||||  ||||||||| ||||||||||||||||||||| ||| ||||||||| | |   |||||||||||| ||| |||||  ||    
T  21626106 ttttcttcataatacaaaaccatcctcatttgggggaactaaaaagttgtattggagaagggttttgtggagggttttggagggttaataagaattcttc 21626205  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  21626206 aaatttaatctatgttgtta 21626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 1364757 - 1364884
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  1364757 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 1364856  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||| ||||||| |||||||||||||||    
T  1364857 aaaaattgtattggaggagggttttggg 1364884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 26599368 - 26599241
Alignment:
Q  140 gaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttgga 239  Q
    |||||||||||| || ||||||||||||||||||| ||  | |||||||||| |||||||| | || ||||||| |||||||||||||||   |||||||    
T  26599368 gaagggctttggggggttcatttttcttcataatacaattccctcctcatttgggggaactcacaaattgtattggaggagggttttgggaggttttgga 26599269  T
Q  240 gggtttatatgaattaatcaaatttaat 267  Q
    ||||||| |||| ||  |||||||||||    
T  26599268 gggtttacatgagttcttcaaatttaat 26599241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 35550253 - 35550139
Alignment:
Q  163 ttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaat 262  Q
    ||||||||||||  |||| |||||||||| ||||||||||||||||||| | ||| || |||||| |  |||||||||||||||||||||||  ||||||    
T  35550253 ttcttcataatactaaaccctcctcattt-ggggaactaaaaagttgtactggagtagagttttgtgggattttggagggtttatatgaattcttcaaat 35550155  T
Q  263 ttaatctatgttgtta 278  Q
    |||||||| |||||||    
T  35550154 ttaatctacgttgtta 35550139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 15803113 - 15803238
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||||||||||||||||  |||||||| || |  || ||||||||||||  | ||||||||||| |||||||||| ||||||| || |||||||||    
T  15803113 ggaaggagcaagtggaagaaatggaggacattggaag-gaggggctttggagggcttatttttcttcaaaatataaaaccctcctcagttgggggaacta 15803211  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    |||| ||||||| ||||||| ||||||    
T  15803212 aaaaattgtattggaggaggattttgg 15803238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 567369 - 567481
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    |||||||||| | ||||||||||||||||||||||| |||| |||| |||||||||||||  ||||| ||   |||||||||||||| |||||||  |||    
T  567369 tttttcttcaaattataaaactctcctcatttaggg-aactcaaaaattgtattagaggaaagtttttggaggttttggagggtttacatgaattcttca 567467  T
Q  260 aatttaatctatgt 273  Q
    ||||||||||||||    
T  567468 aatttaatctatgt 567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 34757589 - 34757706
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt-gggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| |||||||||||| |||   |||||||||| |||||||||||  ||||    
T  34757589 tttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggtttttggagggcttatatgaattcttcaa 34757688  T
Q  261 atttaatctatgttgtta 278  Q
    ||| |||| |||||||||    
T  34757689 attcaatcaatgttgtta 34757706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 40211986 - 40212103
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| || ||||||||||||   |||||||||||| ||| |||||   |||    
T  40211986 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggatgagggttttggggggttttggagggttaataagaattctacaa 40212085  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  40212086 atttaatttatgttgtta 40212103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 8555933 - 8555757
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| |||| |  |||| |||||||| |   |||||  || ||||| ||||  | |||||||| |||||||||    
T  8555933 ggaaggagcaagtggaagaaatagaagacattgggagaagagggttttggaggttaattttttactcgtaataaaaaatccccctcatttgggggaacta 8555834  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || | |||||||||||||||||  ||||||| ||||||| ||||||    
T  8555833 aaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaattcaatctatattgtta 8555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 13766095 - 13765920
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||| ||||||||||| ||| ||||| || | |  |||||||| |||| |   |||||  |||||||| |||| || |||||||| ||||||||     
T  13766095 ggaaggagcgagtggaagaaatagaagacattggtagaagagggctttagaggttaattttttactcataataaaaaattcccctcattt-ggggaactc 13765997  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  13765996 aaaaattgtattgggggagggttttggggggttgtggagggtttatatgaatttttcaaattcaatctatgttgtta 13765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 39204980 - 39205117
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttagggg-aactaaaaagttgtattagaggagggttttgggcaattttggag 240  Q
    |||||||||| || || | |||| | |||||||  |||| |||||||||| |||| ||||||||| ||||||| ||||||| |||| ||   ||||||||    
T  39204980 agggctttggcgggttaacttttttccataatactaaaccctcctcatttggggggaactaaaaaattgtattggaggaggattttaggggtttttggag 39205079  T
Q  241 ggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||  | ||||||||||||||||||||    
T  39205080 ggtttatatgaattcttgaaatttaatctatgttgtta 39205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 276
Target Start/End: Complemental strand, 9087562 - 9087448
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| |||||||||| |||||||||| |||||||| |||| ||||||  ||||||| |||||||   ||| |||| |||||||||||||  ||||    
T  9087562 ttttcttcaaaatataaaaccctcctcattt-ggggaactgaaaaattgtatcggaggaggattttggggggtttgggagagtttatatgaattcttcaa 9087464  T
Q  261 atttaatctatgttgt 276  Q
    ||||||| ||||||||    
T  9087463 atttaatatatgttgt 9087448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 31584865 - 31584747
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||| || ||||  |||||| |||||||   |||  ||||||||||||||| |  ||    
T  31584865 atttttcttcaaaatataaaaccctcctcattt-ggggaactaaaaaattatattgaaggaggattttggggggtttgagagggtttatatgaagtcttc 31584767  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||||||||||    
T  31584766 aaatttaatatatgttgtta 31584747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 6656042 - 6656171
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  6656042 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 6656141  T
Q  202 aa--aagttgtattagaggagggttttggg 229  Q
    ||  || ||||||| |||||||||||||||    
T  6656142 aaacaaattgtattggaggagggttttggg 6656171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 10165421 - 10165512
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtt 277  Q
    |||||||| ||||||||||||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| |||||||||||||    
T  10165421 cctcatttgggggaactaaaaaattgtattgggggagggttttggg--gttatggagggtttatatgaatttttcaaattcaatctatgttgtt 10165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 9087812 - 9087681
Alignment:
Q  143 gggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggaggg 242  Q
    |||||||||||  || |||||| |||| |||||||||| ||||||||||  |||||||||||| ||||||  ||||| |||||||||   ||| |||| |    
T  9087812 gggctttggagacttaattttt-ttcaaaatataaaaccctcctcatttgagggaactaaaaa-ttgtatcggaggatggttttggggggtttgggagag 9087715  T
Q  243 tttatatgaattaatcaaatttaatctatgttgt 276  Q
    ||||||||||||| ||||||||||| ||| ||||    
T  9087714 tttatatgaattattcaaatttaatatatattgt 9087681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 36870189 - 36870310
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||  ||||||||||| ||||||||| ||   ||  ||||||||| ||  | ||||||||||| |||| ||||| |||||||||| |||||||||    
T  36870189 ggaaggagtgagtggaagaaatagaggacattggaggag--gggctttggtgggattatttttcttcaaaatagaaaaccctcctcatttgggggaacta 36870286  T
Q  202 aaaagttgtattagaggagggttt 225  Q
    |||| ||||||| |||||||||||    
T  36870287 aaaaattgtattggaggagggttt 36870310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 8411086 - 8410911
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||||||||| || |||| ||| ||||| ||||    ||||||||||||| |   |||||  | |||||| |||| || |||||||| |||||||| |    
T  8411086 gaaggagcaagttgaggaaatagaagacattgggaggagagggctttggaggttaattttttacttataataaaaaattcccctcatttgggggaactca 8410987  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||| | || ||||||||||   || |||| ||||||||||||||  ||||||| ||||||||||||||    
T  8410986 aaaattgtattgggggtgggttttggggggttatggaaggtttatatgaatttttcaaattcaatctatgttgtta 8410911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 18826301 - 18826207
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||| ||||||||||    
T  18826301 cctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatttatgttgtta 18826207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 15555502 - 15555378
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || |||||||||||||||| ||||| || ||||||| | |||||||    
T  15555502 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaatttttcttcataatacaaaacccttctcatttggaggaacta 15555404  T
Q  202 aaaagttgtattagag-gagggtttt 226  Q
    |||| ||||||| ||| |||||||||    
T  15555403 aaaaattgtattggagtgagggtttt 15555378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 16625934 - 16625818
Alignment:
Q  106 ggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaa 205  Q
    ||||||||||||||||| |||| |||| ||||  | |||||||||| || || |||||||||||| ||| |||||   |||||||| ||||||| |||||    
T  16625934 ggagcaagtggaagaaatagagtacattgggaggggagggctttggggggttaatttttcttcatgatacaaaac---cctcatttgggggaacgaaaaa 16625838  T
Q  206 gttgtattagaggagggttt 225  Q
    ||||  || |||||||||||    
T  16625837 gttgctttggaggagggttt 16625818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 30072179 - 30072095
Alignment:
Q  141 aagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    ||||| ||||||||| | ||||||||||| |||||||||  |||||||||| || |||||||||| ||||||| ||||||||||||    
T  30072179 aagggttttggaggacttatttttcttcaaaatataaaatcctcctcatttgggagaactaaaaa-ttgtattggaggagggtttt 30072095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 31082740 - 31082905
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  ||||  | |||||||||| || || | |||||||| |||||  |||| |||||| ||| |||||||||    
T  31082740 ggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggg-ttaacttttcttcgtaatactaaaccctcctcgtttgggggaacta 31082838  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||  ||||||| |||||||||||||||          |||||||||||||||  ||||||||||| ||||||||||    
T  31082839 aaatattgtattggaggagggttttggg----------gggtttatatgaattcttcaaatttaatttatgttgtta 31082905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 35412279 - 35412202
Alignment:
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||| ||||||| |||||||  ||||||||| |||||||||||||  ||||||||||| | ||||||||    
T  35412279 aaaaagttgtattggaggaggattttgggagattttggagagtttatatgaattcttcaaatttaatatgtgttgtta 35412202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 36030738 - 36030856
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||| ||||||||||| ||||||| | | || ||| |||||||||| || |||||||||||||| |||| |||| ||||||||||| ||||||||    
T  36030738 ggaaggagccagtggaagaaatagaggaccttgaga-agagagggctttggggg-ttcatttttcttcagaatacaaaattctcctcatttgggggaact 36030835  T
Q  201 aaaaagttgtattagaggagg 221  Q
     |||| ||||| | |||||||    
T  36030836 caaaaattgtaatggaggagg 36030856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 36567434 - 36567259
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaacta 201  Q
    |||||||||||||||||||| ||| ||||| || |    |||| |||||||| |   |||||  |||||||| |||| ||||| |||||| ||||||||     
T  36567434 gaaggagcaagtggaagaaatagaagacattggaaggagagggttttggaggttaattttttactcataataaaaaa-tctccctcatttgggggaactc 36567336  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||| ||||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  36567335 aaaaattgtattgggggagagttttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 36567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 3039038 - 3038928
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||| ||||  | |||||||| |||||||| |||| ||||||| | ||||| ||||||| | || |||||||||||||| ||||  ||||||| ||    
T  3039038 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggaggtttttggg-agttatggagggtttatatcaatttttcaaattcaa 3038940  T
Q  267 tctatgttgtta 278  Q
    ||||||||||||    
T  3038939 tctatgttgtta 3038928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 4041981 - 4042064
Alignment:
Q  195 ggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  4041981 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 4042064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 278
Target Start/End: Complemental strand, 25960765 - 25960591
Alignment:
Q  104 aaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaactaa 202  Q
    ||||||||||||||||||| ||| ||||| |  |    ||||||||||||| |   |||||  |||||||| |||| ||||| |||||| |||||||| |    
T  25960765 aaggagcaagtggaagaaatagaagacattgaaaggagagggctttggaggttaattttttactcataatagaaaa-tctccctcatttgggggaactca 25960667  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||  | ||||||||||| |   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  25960666 aaaattgtatcgggggagggttttgagggcttatggagggtttatatgaatttttcaaattcaatctatgttgtta 25960591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 43334813 - 43334907
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||| |||||||| |||| ||||||| | ||||||||||| |   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  43334813 cctcttttgggggaactcaaaaattgtattgggggagggttttgagaggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 43334907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 8991037 - 8990944
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||| |||| ||||||| | |||||||||| ||   || ||||||||||||||||||   ||||||| ||||||||||||||    
T  8991037 ctcatttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatatttcaaattcaatctatgttgtta 8990944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 274
Target Start/End: Complemental strand, 12941953 - 12941783
Alignment:
Q  106 ggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggat---tcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||| |||||||||||| ||||||||| ||||  |||||||||||| ||     | ||||||||||| |||||||||  || ||||||| |||||||||     
T  12941953 ggagtaagtggaagaaatagaggacattgggag-gaagggctttgggggggggcttatttttcttcaaaatataaaatccttctcatttgggggaactag 12941855  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    ||| || |||| |||||| |||||||  | |||   || |||||||||||||  ||||||||||| ||||||    
T  12941854 aaaattatattggaggagagttttggagagtttgaaagagtttatatgaattcttcaaatttaatatatgtt 12941783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 44954152 - 44954064
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcattt 191  Q
    ||||| || |||||||||||| |||||||| ||| || || |||||||||  |||| ||||||||||| |||||||||| ||||||||||    
T  44954152 ggaagaagtaagtggaagaaatagaggacaccgg-acggaggggctttgggagatttatttttcttcaaaatataaaaccctcctcattt 44954064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 277
Target Start/End: Complemental strand, 5322275 - 5322111
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||| ||||||| | | ||||||||| ||||  | || ||||||| || ||||||||||||||||||| ||||  |||||||||| ||||||||     
T  5322275 ggaaagagctagtggaaaagatagaggacattgggaggggagagctttggggg-ttcatttttcttcataatacaaaatcctcctcatttgggggaactc 5322177  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtt 277  Q
    ||||  |||||| ||  ||||          ||||||||||||||||||||||| |||||||||| | ||||||||    
T  5322176 aaaaactgtattggaaaaggg----------ttttggagggtttatatgaattattcaaatttaagcaatgttgtt 5322111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 18780392 - 18780484
Alignment:
Q  186 tcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| |||||||| |||| ||||||| |  ||||||||||||   || |||||| ||||||||||||  ||||||| ||||||||||||||    
T  18780392 tcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 18780484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 19382802 - 19382977
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| | ||   |||||||||| ||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  19382802 ggaaggagcaagtggaagaaatagaagacattgagaggaaagggctttgtaggttaattttttactcataataaaaaatccccctcattt-ggggaactc 19382900  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| | ||||| | |||||||||||||   || |||||| |||||||||| |  |||||||  |||||||||||||    
T  19382901 aaaaatcgtattgggggagggttttggggggttatggaggatttatatgaaattttcaaattctatctatgttgtta 19382977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 30312562 - 30312435
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| |||  |||| ||||    |||| |||||||| |   |||||  |||||||| ||||  | |||||||| |||||||||    
T  30312562 ggaaggagcaagtggaagaaatagaacacattgggaggagagggttttggaggttaattttttactcataataaaaaatccccctcatttgggggaacta 30312463  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||| |||||||  ||||||||||||||    
T  30312462 aaaaattgtattgaaggagggttttggg 30312435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 40357446 - 40357557
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||| ||||  | |||||||| |||||||| |||| ||||||| |  ||||||||||||   || |||| ||||||||||||||  ||||||  ||    
T  40357446 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatggaaggtttatatgaatttttcaaatccaa 40357545  T
Q  267 tctatgttgtta 278  Q
    ||||||||||||    
T  40357546 tctatgttgtta 40357557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 44137152 - 44137231
Alignment:
Q  195 ggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||    
T  44137152 ggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 44137231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 32243399 - 32243568
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||||||  |||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||   ||||||||| ||||||||     
T  32243399 ggaaggagcaatgggaagaaatagaagacattgggaggagagggctttggaggttaattttttaatcataataaaaaatcatcctcatttgggggaactc 32243498  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatg 272  Q
    |||| ||||||| | |||||||||||||   || || ||||||||||| ||||  ||||||| ||||||||    
T  32243499 aaaaattgtattgggggagggttttggg-ggttatgaagggtttatatcaatttttcaaattcaatctatg 32243568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 38293895 - 38293988
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||| | |||||||||| ||   || |||||||||||||||||||   |||||| ||||||||||||||    
T  38293895 cctcattt-ggggaactcaaaaattgtattgggggagggtttttggaggttatggagggtttatatgaattttccaaattcaatctatgttgtta 38293988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 39181003 - 39181091
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttgg-aggattcatttttcttcataatataaaactctcctcattt 191  Q
    |||||||| |||||||||||| ||||||| | ||||  |||||| ||||| ||| || ||||||||||| |||||||||||||||||||||    
T  39181003 ggaaggagtaagtggaagaaatagaggactttgggag-gaagggttttgggaggctt-atttttcttcaaaatataaaactctcctcattt 39181091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 1270779 - 1270695
Alignment:
Q  182 ctcctcatttaggggaactaaaaag-ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||||| |||||||||||||  |||||||  | |||||||||| |  |||||||||||||||||||||||  ||||||||||    
T  1270779 ctcctcattt-ggggaactaaaaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaa 1270695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 3119917 - 3119833
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| ||||||||| ||||| |||||||   || | |||||||||||||||||  ||||||| ||||||||||||||    
T  3119917 ggggaactcaaaaattgtattag-ggaggattttgggggcttatagagggtttatatgaatttttcaaattcaatctatgttgtta 3119833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 8184260 - 8184147
Alignment:
Q  157 tcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaa 256  Q
    |||||||||||||||||| |||| | | ||| ||| |||||||| ||||||| ||||| ||||| ||||||||   ||||||| | |||| |||||||      
T  8184260 tcatttttcttcataatacaaaatttttctcgttt-ggggaactcaaaagttttattaaaggagagttttggg--gttttggaagatttacatgaattct 8184164  T
Q  257 tcaaatttaatctatgt 273  Q
    ||| |||||||||||||    
T  8184163 tcagatttaatctatgt 8184147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 16625826 - 16625785
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  16625826 ggagggtttatatgaattcttcaaatttaatctatgttgtta 16625785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 41100196 - 41100136
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||| ||||| |||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  41100196 tcataatacaaaaccctcctcattt-ggggaactaaaaaattgtattggaggaggattttgg 41100136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 44656846 - 44656731
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| |||||||||   ||||||||| ||||||||||||| | ||||| | ||||||||||||    |||  |||||||||| ||||||  ||||    
T  44656846 ttttcttcaaaatataaaatcatcctcattt-ggggaactaaaaact-gtattggtggagggttttggagggtttgagagggtttatgtgaattgttcaa 44656749  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  44656748 atttaatatatgttgtta 44656731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 6128881 - 6128835
Alignment:
Q  231 aattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  6128881 aattttggagggtt-atatgaatttttcaaatttaatctatgttgtta 6128835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11949878 - 11949932
Alignment:
Q  150 ggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaa 205  Q
    ||||| || |||||||||||||||| |||||||| ||||||| |||||||||||||    
T  11949878 ggagggtttatttttcttcataatacaaaactcttctcattt-ggggaactaaaaa 11949932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 30523171 - 30523297
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||| ||| ||||||||  ||||  | |||  ||||| || || | |||||||||||||| ||||  || || |||| |||||||||    
T  30523171 ggaacgagcaagtggaacaaatagaggacaatgggaagggaggattttggtgggttaaattttcttcataatacaaaatccttctaattt-ggggaacta 30523269  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||| ||||||| ||||||| |||||||    
T  30523270 aaaaattgtattggaggaggattttggg 30523297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 12964129 - 12963956
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| ||||    || |||||||||| |   |||||  |||||||| |||| ||||| |||||| ||||||||    
T  12964129 ggaaggagcaagtggaagaaatagaagacattgggaggagagagctttggaggttaattttttactcataata-aaaaatctccatcatttgggggaact 12964031  T
Q  201 aaaaagttgtattag-aggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
      ||| ||||||| |  |||||||||||||   ||  ||||||||||||||||||  ||||||  ||||||||||    
T  12964030 ccaaaattgtatttgcgggagggttttggggggttacggagggtttatatgaatttttcaaatccaatctatgtt 12963956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 13767472 - 13767518
Alignment:
Q  232 attttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||||||||||  ||||||| ||||||||||||||    
T  13767472 attttggcgggtttatatgaatttttcaaattcaatctatgttgtta 13767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 22101592 - 22101687
Alignment:
Q  170 taatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaat 267  Q
    ||||||||||||||||||||||  ||| |||||||| |  |||| || ||||||||| || | |||  || ||||||||||||||  |||||||||||    
T  22101592 taatataaaactctcctcattt--ggggactaaaaaatgatattggatgagggttttagggagtttgagaaggtttatatgaattcttcaaatttaat 22101687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 16813679 - 16813724
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||| ||||  | ||||||||||||||||||||    
T  16813679 ttttggagggtttatataaattctttaaatttaatctatgttgtta 16813724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 16852958 - 16853003
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||| ||||  | ||||||||||||||||||||    
T  16852958 ttttggagggtttatataaattctttaaatttaatctatgttgtta 16853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 39819876 - 39819932
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtatt 213  Q
    ||||||||||||| ||||| ||||  |||||||||| ||||||||||||| |||||||    
T  39819876 ttcatttttcttcctaatacaaaatcctcctcattt-ggggaactaaaaaattgtatt 39819932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 35412346 - 35412278
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaa 179  Q
    |||||||| ||| ||||||||| || | || |||||||||| || || |||||||||||||||| ||||    
T  35412346 aagtggaaaaaatagaggacattggaaaaggagggctttggggggttaatttttcttcataatacaaaa 35412278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 39913234 - 39913305
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    ||||||||||||| | |||||||  ||||||||||| |||||||| |||| || |||| ||||||| ||||||    
T  39913234 ttcatttttcttcctgatataaatatctcctcattt-ggggaactcaaaaattatattggaggaggattttgg 39913305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 41656742 - 41656691
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgta 211  Q
    |||||||||||||||| ||||||||||||| || |||||||| |||| |||||    
T  41656742 atttttcttcataatacaaaactctcctca-ttgggggaactcaaaaattgta 41656691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 43190637 - 43190573
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    |||||||||||||| ||||||||| |||||| | |||| | |||| |||||||  ||||||||||    
T  43190637 ttttcttcataatacaaaactctcatcatttggaggaaatcaaaaattgtattgaaggagggttt 43190573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 39193855 - 39194031
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||| ||||||||||||||| |||| |||| ||||  | |||||||||| || || |||||||||||||||||||||| ||| |||||| |||||||||    
T  39193855 ggaagtagcaagtggaagaaatagagtacattgggaggggagggctttggggggttaatttttcttcataatataaaaccctcttcatttgggggaacta 39193954  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||| |||||||||||| ||   ||||| ||||||||||||||||  ||||||||| ||||||||||||    
T  39193955 aaaagttgtattggaggagggtttttgggggttttgaagggtttatatgaattcttcaaatttattctatgttgtta 39194031  T

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Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 1839976 - 1839801
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||||||||| |||| ||| ||||||||||||  | ||||||||||| |||||||||| |||||||||| ||||||||     
T  1839976 ggaaggagtaagtggaagaaatagaggacattggga-agaggggctttggagggcttatttttcttcaaaatataaaaccctcctcatttgggggaactt 1839878  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||||||||||||||   |||  |||||||||||||||||  ||||||||||| ||||||||||    
T  1839877 aaaaattgtattggaggagggttttggggggtttaagagggtttatatgaattcttcaaatttaatatatgttgtta 1839801  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 21174014 - 21173839
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  21174014 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaacta 21173916  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| || |||| |||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  21173915 aaaaattatattggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 21173839  T

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Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 27085330 - 27085448
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||||||  |   ||| ||||||||||||||||||  ||    
T  27085330 atttttctttaaaatataaaactcttctcattt-ggggaactaaaaaattgtattggaggatggttttaaggggtttgggagggtttatatgaattcttc 27085428  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||||||||||    
T  27085429 aaatttaatatatgttgtta 27085448  T

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Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 156 - 267
Target Start/End: Complemental strand, 40985177 - 40985066
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||||| ||||||||| ||||  |||||||||| |||||||| |||| ||||||| ||||||||||||| |   |||||||||||||| |||||||     
T  40985177 ttcatttttattcataatacaaaatcctcctcatttgggggaactcaaaaattgtattggaggagggttttgaggggttttggagggtttacatgaattc 40985078  T
Q  256 atcaaatttaat 267  Q
     |||||||||||    
T  40985077 ttcaaatttaat 40985066  T

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Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 79770 - 79644
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  ||||  | |||||||||| || ||   ||||||||||||||  |||| |||||||||| |||||||||    
T  79770 ggaacgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttacgttttcttcataatactaaaccctcctcatttgggggaacta 79671  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    |||| ||||||| ||||||||||||||    
T  79670 aaaaattgtattggaggagggttttgg 79644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 276
Target Start/End: Original strand, 36906111 - 36906285
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  || ||||| ||||  | |||||||| ||||||||     
T  36906111 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcgtaataaaaaatccccctcatttgggggaactc 36906210  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgt 276  Q
    |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||  ||||||||||||    
T  36906211 aaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgttgt 36906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 43733219 - 43733101
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    ||||| ||||||||| ||||  ||||||||||  ||||| |||||| ||||||| |||||||||||| || | ||||||||| ||||||||||||  | |    
T  43733219 tttttattcataatacaaaatcctcctcatttgagggaattaaaaaattgtattggaggagggtttttgggagttttggaggatttatatgaatttttaa 43733120  T
Q  260 aatttaatctatgttgtta 278  Q
    |||| ||||||||||||||    
T  43733119 aattcaatctatgttgtta 43733101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 12506294 - 12506177
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| ||||| |||| |||||||||| ||||||||||||| ||||||| ||| ||| |||| ||    |||||||||||||||||||||  ||||    
T  12506294 ttttcttcaaaatattaaaccctcctcatttgggggaactaaaaaattgtattggagaaggatttttgggggctttggagggtttatatgaattcttcaa 12506195  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||| ||||||    
T  12506194 atttaatatatattgtta 12506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 13227693 - 13227810
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||| ||| ||||||||||||||||  || ||||||||||| |  || || |||||||||| |   ||||| ||||||||||||||||| ||||    
T  13227693 ttttcttcattatacaaaactctcctcatttgaggaaactaaaaagtggcgttggatgagggttttgagaggttttgaagggtttatatgaattattcaa 13227792  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  13227793 atttaatttatgttgtta 13227810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 274
Target Start/End: Complemental strand, 31297503 - 31297333
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||||||||||||||||| ||| ||||| ||||    | ||||||| ||| |   |||||  |||||||| ||||    |||||||| ||||||||||    
T  31297503 gaaggagcaagtggaagaaatagaagacattgggaggagatggctttgaaggttaattttttactcataataaaaaaaaaacctcattt-ggggaactaa 31297405  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    ||| ||||||| |||||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||    
T  31297404 aaaattgtattggaggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 31297333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 43239653 - 43239766
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||| | ||||  |||||||||| |||||| |||||| ||||||| || |||| ||||| |  |||||| ||||||||||||||||  ||||    
T  43239653 ttttcttcataacacaaaagcctcctcattt-ggggaattaaaaaattgtattggatgaggtttttgagggattttgaagggtttatatgaattcttcaa 43239751  T
Q  261 atttaatctatgttg 275  Q
    |||||||||||||||    
T  43239752 atttaatctatgttg 43239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 34272439 - 34272615
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcat-ttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| | ||    ||||||||||||| || || ||||  |||||||| ||||  | |||||||| ||| ||||    
T  34272439 ggaaggagcaagtggaagaaatagaagacattgagaggagagggctttggagg-ttaatcttttactcataataaaaaatccccctcatttggggaaact 34272537  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | ||| |||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  34272538 caaaaattgtattgggggaaggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 34272615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 25033304 - 25033480
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||| ||||||||||    || |||||||||| |   |||||  |||||||| ||||   ||||||||| ||||||||     
T  25033304 ggaaggagtaagtggaagaaatagaagacatcgggaggagagagctttggaggttaattttttactcataataaaaaatcatcctcatttgggggaactc 25033403  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || ||  |||||||||||||||  |||||||  |||||||||||||    
T  25033404 aaaaattgtattgggggagggttttggggggttatgaggggtttatatgaatttttcaaattcgatctatgttgtta 25033480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 278
Target Start/End: Complemental strand, 13865247 - 13865073
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||||||||||||||||| ||| |||||  |||   |||| ||||| ||| |   |||||  |||||||| ||||  | ||| |||| |||||||| |    
T  13865247 gaaggagcaagtggaagaaatagaagacattcggaggaaaggactttgaaggttaattttttactcataataaaaaatcccccttattt-ggggaactca 13865149  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||| | |||||||||||||   || || ||||||||||||||||  ||||||||||||||||||||||    
T  13865148 aaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaatttaatctatgttgtta 13865073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 44879528 - 44879622
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||||||||| ||  |||| ||||||||||||||| ||||||||| ||||||| ||||| ||||||| |  ||||||||||||||| |||||||    
T  44879528 atttttcttcatgattcaaaattctcctcatttaggg-aactaaaaaattgtattggaggaaggttttgagggattttggagggtttacatgaatt 44879622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 44880393 - 44880299
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||||||||| ||  |||| ||||||||||||||| ||||||||| ||||||| ||||| ||||||| |  ||||||||||||||| |||||||    
T  44880393 atttttcttcatgattcaaaattctcctcatttaggg-aactaaaaaattgtattggaggaaggttttgagggattttggagggtttacatgaatt 44880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 23932705 - 23932588
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  | || || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  23932705 aagtggaagaaatagaggaaaatgagagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 23932607  T
Q  211 attagaggagggttttggg 229  Q
    ||| ||||||| |||||||    
T  23932606 attggaggaggattttggg 23932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 6742 - 6919
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactct-cctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| ||||    || |||||||||| |   |||||  |||||||| |||| ||| |||||||| ||| ||||    
T  6742 ggaaggagcaagtggaagaaatagaagacattgggaggagagagctttggaggttaattttttactcataataaaaaaatctccctcatttggggaaact 6841  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | ||||||||||| |   || ||||| |||||||||||||  | ||||| ||||||||||||||    
T  6842 caaaaattgtattgggggagggttttgaggggttatggagagtttatatgaattttttaaattcaatctatgttgtta 6919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 1942119 - 1942034
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  1942119 ggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 1942034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 10589785 - 10589904
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||   | |||||||||  |||||||||| ||||||| ||||||| |||||||   ||| |||| |||||||| ||||  |     
T  10589785 atttttcttcaaaatataaaatcattctcatttagaagaactaaaaaattgtattggaggaggattttggggggtttgggagagtttatataaatttttt 10589884  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||| ||||    
T  10589885 aaatttaatctatgtagtta 10589904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 29611921 - 29612091
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    |||||||||||||||| | | ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  ||| |||||| |||||| ||||||     
T  29611921 gagcaagtggaagaaatataagacattgggaggagagggctttggaggttaattttttactcataataaaaaatcctc-tcatttgggggaattaaaaaa 29612019  T
Q  207 ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |  ||||||||||||   || || ||||||||||||||||  ||||||| ||||||||||||||    
T  29612020 ttgtattgggtgagggttttggggggttatgaagggtttatatgaatttttcaaattaaatctatgttgtta 29612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 4166799 - 4166689
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||| |||||||||  |||||||| ||||  ||| | |||||| || |  |||||||||||||||| |||||||| ||||||    |||||||    
T  4166799 ggaaggagcaaatggaagaaagcgaggacattgggagggaatgactttggggggtaaatttttcttcataatacaaaactcttctcattcgaaggaacta 4166700  T
Q  202 aaaagttgtat 212  Q
    |||||||||||    
T  4166699 aaaagttgtat 4166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 28416315 - 28416192
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||| ||| | ||||||||| ||  ||||| |||||| || || ||||||||||| |||||||||| ||||| |||| |||||||||    
T  28416315 ggaaggagtaagtggaaaaaataaaggacatcgagag-gaaggactttggggggtt-atttttcttcaaaatataaaaccctccttattt-ggggaacta 28416219  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
     ||| ||||||| || |||||||||||    
T  28416218 caaaattgtattggatgagggttttgg 28416192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 41866215 - 41866149
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||||||| |||| ||||| |||| ||| ||||||||| ||||||| |||||||||||||    
T  41866215 ttttcttcataatattaaaccctccttatttggggaaactaaaaaattgtattggaggagggttttg 41866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 2474923 - 2474748
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttct-tcataatataaaactctcctcatttaggggaact 200  Q
    |||||||| |||||||||||| ||| ||||| ||||    |||| ||||||| ||| ||||||   |||||||| ||||  |||||||||| || |||||    
T  2474923 ggaaggagtaagtggaagaaatagaagacattgggaggagagggttttggag-attaattttttactcataataaaaaatcctcctcatttgggagaact 2474825  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| |||||||   ||||| |||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  2474824 taaaaattgtattgtgggaggattttggggg-ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 2474748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 41455238 - 41455359
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggt-----tttgggcaattttggagggtttatatgaat 253  Q
    ||||||||||| |||||||||| |||||||||| ||| ||||||||| ||||||| |||||||||     ||||||  | ||  ||| ||||||||||||    
T  41455238 atttttcttcaaaatataaaaccctcctcattt-gggaaactaaaaaattgtattggaggagggtcggggtttggg--aattgcgagagtttatatgaat 41455334  T
Q  254 taatcaaatttaatctatgttgtta 278  Q
    |  ||||||||||| ||||||||||    
T  41455335 tcttcaaatttaatatatgttgtta 41455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 4734653 - 4734477
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    |||| |||||||| |   |||||  |||||||| |||| ||  ||||||| ||||| ||     
T  4734653 ggaaggagcaagtggaagaaatagaagacattgggaggagagggttttggaggttaattttttactcataataaaaaattcctctcatttgggggacctc 4734554  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||  || ||||||  ||||||||  ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  4734553 aaatattatattaggagagggtttcagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 4734477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 36103007 - 36102871
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| | |||||| |||| |||||||   |||||||||||||   || ||||||    
T  36103007 agggctttggaggttaattttttactcataataaaaaatccccctcatttggaggaactcaaaatttgtattgcgggagggttttggggggttatggagg 36102908  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| ||||||  ||||||| ||||||||||||||    
T  36102907 gtttatttgaatttttcaaattcaatctatgttgtta 36102871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 43007701 - 43007765
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||| |||||||  ||||||||||    
T  43007701 ttttctttataatacaaaactctcctcattttgggaaactaaaaaattgtattgaaggagggttt 43007765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 39418036 - 39418124
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatat 249  Q
    |||||||||||||||  |||| || | | |||| | |||||| |||| |||||||||||||||||||||| |  |||||||||||||||||    
T  39418036 atttttcttcataattcaaaattcccttaatttggaggaactcaaaaattgtattagaggagggttttggtc--ttttggagggtttatat 39418124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 31149957 - 31150002
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  31149957 ttttggagggtttatatgaattcttcaaatttattctatgttgtta 31150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 37659605 - 37659516
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||||||||||||||| |||| ||||||| | | |||||||||||  ||| |||| | ||||||| ||||  ||||||| ||||||||||    
T  37659605 ctcatttaggggaactcaaaaattgtattggggaagggttttgggggattatggaagatttatataaatttttcaaattcaatctatgtt 37659516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 43007757 - 43007798
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  43007757 ggagggtttatatgaatttttcaaatttaatctatgttgtta 43007798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 1840362 - 1840244
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttgg-------aggattcatttttcttcataatataaaactctcctcatttagg 194  Q
    |||||||||||||||||||||  ||||||||  ||| || ||||||||||       |||  | |||||||||||| ||| ||||| |||||||||| |     
T  1840362 ggaaggagcaagtggaagaaattgaggacattcggagaggagggctttgggggggggaggggtaatttttcttcatgatacaaaaccctcctcatttgga 1840263  T
Q  195 ggaactaaaaagttgtatt 213  Q
    ||||||||| |||||||||    
T  1840262 ggaactaaatagttgtatt 1840244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 7080079 - 7079975
Alignment:
Q  171 aatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatcta 270  Q
    |||||||||| ||||| ||||  |||||||||||| ||||||| || |||| ||||||   |||| ||| ||||| ||||||||  ||||||||| ||||    
T  7080079 aatataaaaccctccttattt--gggaactaaaaaattgtattggaagagg-ttttggtggatttgggatggtttgtatgaattcttcaaatttagtcta 7079983  T
Q  271 tgttgtta 278  Q
    ||||||||    
T  7079982 tgttgtta 7079975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 249
Target Start/End: Original strand, 34304640 - 34304784
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| |||||   ||    ||||||||| ||| |   |||||  |||||||| |||| || |||||||| ||||||||     
T  34304640 ggaaggagcaagtggaagaaatagaagacattaagatgagagggctttgaaggttaattttttactcataataaaaaa-tcccctcatttgggggaactc 34304738  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatat 249  Q
    |||| ||||||||| |||||||||||||   || ||||||||||||||    
T  34304739 aaaaattgtattaggggagggttttggg--gttatggagggtttatat 34304784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 35376742 - 35376658
Alignment:
Q  145 gctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact-aaaaagttgtattagaggagggttttgg 228  Q
    ||||||| || ||||||||||||||| ||| ||||   ||||||||| |||||||| ||||| |||||||||||||  |||||||    
T  35376742 gctttggggggttcatttttcttcatgatacaaaatcttcctcatttgggggaactgaaaaaattgtattagaggatagttttgg 35376658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 13370009 - 13369902
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaa 261  Q
    ||||||| |||||||||||  || ||||||  ||||||||| || || |||| ||||||| ||||| |   ||||| | ||||||||||||||  |||||    
T  13370009 tttcttcgtaatataaaaccttcatcatttgagggaactaacaaattctattggaggaggattttgaggttttttgaaaggtttatatgaattcttcaaa 13369910  T
Q  262 tttaatct 269  Q
    ||||||||    
T  13369909 tttaatct 13369902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 26772740 - 26772673
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||||||| ||||| ||| ||||||   ||||||||||| ||||||| || |||||||||||    
T  26772740 ttttcttcataatacaaaaccctcatcatttgaaggaactaaaaaattgtattggatgagggttttgg 26772673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 5911525 - 5911472
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtatt 213  Q
    ||||||||| | |||||||||| |||||||||| ||||||||||||| |||||||    
T  5911525 atttttctttaaaatataaaaccctcctcattt-ggggaactaaaaaattgtatt 5911472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 6943492 - 6943446
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgttaa 279  Q
    |||||||||||| |||||||||  ||||||||||| |||||||||||    
T  6943492 ttttggagggttaatatgaattcttcaaatttaatttatgttgttaa 6943446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 12595370 - 12595408
Alignment:
Q  235 ttggagggtttatatgaattaatcaaatttaatctatgt 273  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  12595370 ttggagggtttatatgaattcttcaaatttaatctatgt 12595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 15108290 - 15108245
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||| |||||||||||  ||||||| ||||||||||||||    
T  15108290 ttttggagggattatatgaatttttcaaattaaatctatgttgtta 15108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 276
Target Start/End: Complemental strand, 23702580 - 23702463
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    |||||||||||| |||||| |||| ||  || |||| || ||||| |||| ||||||| ||||| | ||||||| | || || | | ||||||||||||     
T  23702580 ttcatttttcttaataatacaaaattc--cttattt-ggagaactcaaaaattgtattggaggaagattttgggaagttatgaatgatttatatgaattc 23702484  T
Q  256 atcaaatttaatctatgttgt 276  Q
     ||||||||||||||||||||    
T  23702483 ttcaaatttaatctatgttgt 23702463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 29584233 - 29584274
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  29584233 ggagggtttatatgaattcttcaaaattaatctatgttgtta 29584274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 34349730 - 34349815
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| || |||| | |||||||||||||   || || ||||||||||||||||  ||||||| ||| ||||||||||    
T  34349730 ggggaacttaaaaattatatttggggagggttttggggggttatgaagggtttatatgaatttttcaaattcaatatatgttgtta 34349815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 274
Target Start/End: Complemental strand, 1111160 - 1111120
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  1111160 tttggagggtttatataaattcttcaaatttaatctatgtt 1111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 3404595 - 3404555
Alignment:
Q  238 gagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  3404595 gagggtttatatgaatttttcaaattcaatctatgttgtta 3404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 4873267 - 4873223
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||||||||||||  ||||||||||||| ||||||||    
T  4873267 tttgaagggtttatatgaatttttcaaatttaatctgtgttgtta 4873223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 13406412 - 13406495
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggttta 246  Q
    |||||||| ||||||||||  ||||||||| ||||||||||||| ||| ||| || ||| ||||||||   ||| ||||||||||    
T  13406412 tttcttcaaaatataaaacaatcctcattt-ggggaactaaaaaattgaattggaagagagttttgggaggtttgggagggttta 13406495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 23963031 - 23963075
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||   ||||||||||| ||||||||||    
T  23963031 tttggagggtttatatgaatccttcaaatttaatatatgttgtta 23963075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 32858755 - 32858930
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| ||||| | ||  ||| |||||||| || ||||||||||||||||||||||||  |||||||||| ||||||||     
T  32858755 ggaatgagcaagtggaagaaatagatgacattgagagggaaaggctttggggg-ttcatttttcttcataatataaaatcctcctcatttgggggaactc 32858853  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||||| ||||||||   |||||||||||||| ||||||| |||||||||||||||||| ||||    
T  32858854 aaaaattgtattcgaggagagttttggggggttttggagggtttacatgaattcatcaaatttaatctatgtagtta 32858930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 29623162 - 29623336
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| |||||||||  |||  | |||||||||  || || |||||||||||||||| ||||| |||||||||| ||| ||||     
T  29623162 ggaaggagcaagtggaagaaatagaggacattaggaggggagggctttgatgg-ttaatttttcttcataatacaaaaccctcctcattt-gggaaactc 29623259  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||  |||||||||||| |   ||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  29623260 aaaagttgtattgcaggagggttttgaggggtttaggagggtttatatgaattcttcaaatttaatatatgttgtta 29623336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 35283012 - 35283187
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||||  ||| ||||  || | ||||||| || || ||||||||||| |||||||||| |||||||||| |||||||||    
T  35283012 ggaaggagcaagtggaagaaatagagatcattgggag-gaggagctttggggggttaatttttcttcaaaatataaaaccctcctcatttgggggaacta 35283110  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| ||||| ||||||| |   ||| ||||||||||||||||||  ||| ||||||| ||||||||||    
T  35283111 aaaaattgtattggaggaaggttttgaggggtttgggagggtttatatgaattcttcatatttaatatatgttgtta 35283187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 33944787 - 33944621
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  33944787 aagtggaagaaatagaggaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 33944689  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  33944688 attggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 33944621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 276
Target Start/End: Original strand, 53888422 - 53888585
Alignment:
Q  113 gtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtat 212  Q
    |||||||||||||| |||||  ||   |||||||||||| ||  | ||||||||||| |||||||||| |||||  ||| ||||||||||||| ||||||    
T  53888422 gtggaagaaacagaagacatatgggaggaagggctttggggggcttatttttcttcaaaatataaaaccctccttgtttgggggaactaaaaaattgtat 53888521  T
Q  213 tagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgt 276  Q
    | |||||||||||||||   ||| ||||||||||||||||||  ||||||||||| ||||||||    
T  53888522 tggaggagggttttggggggtttgggagggtttatatgaattcttcaaatttaatatatgttgt 53888585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 517780 - 517613
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    ||||||||||||||| |||||| |   ||| ||||||||||||| |  || |||||||||||||||| ||||| |||||||||| |||||||| |||| |    
T  517780 agcaagtggaagaaatagaggaaaataggagagaagggctttgggg--ttaatttttcttcataatacaaaaccctcctcatttgggggaactcaaaa-t 517684  T
Q  208 tgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||  ||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  517683 tgtattgaaggagggttttggggggttttggagggttcataagaatttttcaaatttaatttatgttgtta 517613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 33909105 - 33908979
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  |||| || |||||||||| ||||| | |||||||||||||| ||||| |||||||||| ||| |||||    
T  33909105 ggaatgagcaagtggaagaaatagaggaaaatggga-aggagggctttgggggattaacttttcttcataatacaaaaccctcctcatttggggaaacta 33909007  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||||||||||| |||||||||||||||    
T  33909006 aaaagttgtattggaggagggttttggg 33908979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 50948129 - 50948306
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggcttt-ggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    |||| ||||| |||||||||| ||| || |  |||| || |||||||| ||||| || | |||||||||||||| ||||| ||||||| || | ||||||    
T  50948129 ggaatgagcatgtggaagaaatagaagaaaatgggagaggagggcttttggagggttaacttttcttcataatacaaaaccctcctcagttggaggaact 50948228  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||| ||||||| |||||||||||| || ||||||||||| || ||| |||||  ||||||||||| ||||||||||    
T  50948229 aaaaaattgtattggaggagggtttttggaaattttggaggattaataagaatttttcaaatttaatttatgttgtta 50948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 45571060 - 45570926
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||| ||| || |||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||| ||||||| |||| ||    |||  |||    
T  45571060 agggctatggggggttcatttttcttcataatattaaaccctcctcatttgggggaactaaaaaattgtattggaggaggatttttggggggtttaaagg 45570961  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgt 276  Q
    |||||||||||||| |||| |||||| ||||||||    
T  45570960 gtttatatgaattattcaagtttaatttatgttgt 45570926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 3537132 - 3537302
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| ||| |||||||||||| |||||| |  ||||  | ||||||||||  | || | |||||||||||||| ||||| |||||||||| |||||||||    
T  3537132 ggaatgagtaagtggaagaaatagaggaaaatgggaggggagggctttgggaggttaacttttcttcataatacaaaaccctcctcatttgggggaacta 3537231  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||| ||||||| |||||| ||||||||   |||| |||||  ||||||||||  ||||||||||||||||||    
T  3537232 aaaaattgtattggaggagagttttgggggtttttagaggg--tatatgaattcttcaaatttaatctatgtt 3537302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 51686490 - 51686606
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||  |||| | |||||||| ||||||||||||| ||||||| |||||||||||| ||   ||||||||||||||||||||||  ||||    
T  51686490 ttttcttcataatactaaacccccctcattt-ggggaactaaaaaattgtattggaggagggtttttgggggttttggagggtttatatgaatttttcaa 51686588  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  51686589 atttaatttatgttgtta 51686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 45555557 - 45555729
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||    
T  45555557 ggaaggagcaagtggaagaaatagaagacatcggga-agacagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaact 45555655  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
     |||| |||||||   |||||||||||||    | |||||||||||||||||||  ||||||| ||||||||||    
T  45555656 caaaaattgtattgtgggagggttttggggggctatggagggtttatatgaatttttcaaattcaatctatgtt 45555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 49860760 - 49860936
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||| ||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  ||||||||  |||  | |||||||| |||||||||    
T  49860760 ggaaggagcaattggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataacaaatccccctcatttgggggaacta 49860859  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |  | ||||||||||   || ||||||||||||||||||| |||||||| ||||||||||||||    
T  49860860 aaaaattgtattgggcgggggttttggggggttatggagggtttatatgaatttatcaaattcaatctatgttgtta 49860936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 47789603 - 47789427
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcat-ttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| | ||    || |||||||||| || || ||||  |||||||| |||| || |||||| | ||||||||    
T  47789603 ggaaggagcaagtggaagaaatagaagacattgagaggagagagctttggagg-ttaatcttttactcataataaaaaaatcccctcatctgggggaact 47789505  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  47789504 caaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47789427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 1133028 - 1132956
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||| |||||||||| |||||||||||||||| |||||||| |||| ||||||| ||||||||||||||    
T  1133028 ttcattttacttcataatacaaaactctcctcattttggggaactcaaaaattgtattggaggagggttttgg 1132956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 5939938 - 5939762
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  |||| |  | || ||||| || || | |||||||||||||| ||||   ||||||||| | |||||||    
T  5939938 ggaatgagcaagtggaagaaatagaggaaaatgggagatgaaggttttggggggttaacttttcttcataatacaaaatcttcctcatttggaggaacta 5939839  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||  |||||| |||||||||||||||   ||||||||||||  || |||||  ||||||||||||||||||||||    
T  5939838 caaaactgtattggaggagggttttggggcgttttggagggttagtaagaatttttcaaatttaatctatgttgtta 5939762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 41962132 - 41961958
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| || |||||| | |  |||| ||||  | |||||||| ||||||||     
T  41962132 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggagg-ttaattttt-tactcaataaaaaatccccctcatttgggggaactc 41962035  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || || ||||||||||||||||  ||||||| ||||||||||||||    
T  41962034 aaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaattcaatctatgttgtta 41961958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 43237215 - 43237390
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||   ||||||| |||| || |||||||| ||||||||     
T  43237215 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttacgcataataaaaaa-tcccctcatttgggggaactc 43237313  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    || | ||||||| | |||||||||||||   || ||||||||||||| |||||  ||||||| ||||||||||||||    
T  43237314 aacaattgtattgggggagggttttggggggttatggagggtttataagaatttttcaaattcaatctatgttgtta 43237390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 228
Target Start/End: Original strand, 38639522 - 38639639
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || | || ||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  38639522 aagtggaagaaatagaggaaaatgggagaggaaggttttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 38639621  T
Q  211 attagaggagggttttgg 228  Q
    ||| ||||||||||||||    
T  38639622 attggaggagggttttgg 38639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 47714829 - 47714654
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaa-ctctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| || |    ||||||||||||| |   |||||  |||||||| |||| ||| |||||||| ||||||||    
T  47714829 ggaaggagcaagtggaagaaatagaagacattggaaggagagggctttggaggttaattttttactcataataaaaaatctc-cctcattt-ggggaact 47714732  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | ||||||||||||    || |||||||||||||||||||  ||||||| ||||||||||||||    
T  47714731 caaaaattgtattgggggagggttttggagggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47714654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 49183660 - 49183785
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || || | ||||||||||||||  || | |||||||||| || |||||||||| ||||||||||||||||          |||||||||    
T  49183660 agggctttggggggttaacttttcttcataatactaatccctcctcattt-ggagaactaaaaaattgtattagaggaggg----------ttttggagg 49183748  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||||||||||||||||||    
T  49183749 gtttatatgaattcttcaaatttaatctatgttgtta 49183785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 24242249 - 24242073
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| || || ||||    ||| ||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  24242249 ggaaggagcaagtggaagaaatagaagatattgggaggagaggactttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 24242150  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||||||||||    || |||||||||||||||||||  ||| ||| ||||||||||||||    
T  24242149 aaaaattgtattgggggagggttttggtgggttatggagggtttatatgaatttttcatattcaatctatgttgtta 24242073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 27197237 - 27197348
Alignment:
Q  163 ttcttcataatataaaactctcctcatttaggggaactaaaaag-ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaa 261  Q
    |||||||||||| ||||| |||||||||| | |||||||||||  ||||||| || ||||||||||||   |||| |||||||||||||||||  |||||    
T  27197237 ttcttcataatacaaaaccctcctcattt-gaggaactaaaaaaattgtattggatgagggttttggggtttttttgagggtttatatgaattcttcaaa 27197335  T
Q  262 tttaatctatgtt 274  Q
    |||||| ||||||    
T  27197336 tttaatttatgtt 27197348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 48444488 - 48444605
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| ||||||||||  ||||||||| ||||| ||||||| ||||||| || ||||||||||||   | | ||||||||||||||||||  ||    
T  48444488 atttttcttcaaaatataaaaccttcctcattt-ggggatctaaaaaattgtattggatgagggttttggg-tgtctgggagggtttatatgaattcctc 48444585  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||| ||||||    
T  48444586 aaatttaatatatattgtta 48444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 21777739 - 21777617
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||||||||||||||| ||||||||| |||||| || ||| | |||| ||||||| |||||| |||||||    |||||||||||| | |||||||     
T  21777739 ttcatttttcttcataatacaaaactctcatcatttgggagaaatcaaaaattgtattggaggagagttttggaaggttttggagggttcacatgaattc 21777640  T
Q  256 atcaaatttaatctatgttgtta 278  Q
     ||||| | ||||||| ||||||    
T  21777639 ttcaaaatcaatctatcttgtta 21777617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 30995795 - 30995918
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||| ||| ||||||||| ||| || || |||| ||||||| || ||||| || |||||||||||||||| |||||||| ||||||| |||||||||    
T  30995795 ggaaggaacaaatggaagaaatagaagatattgggagagaagggtttgggagg-ttaatttttcttcataatacaaaactctactcattt-ggggaacta 30995892  T
Q  202 aaaa-gttgtattagaggagggtttt 226  Q
    ||||  ||||||| ||| ||||||||    
T  30995893 aaaattttgtatttgagaagggtttt 30995918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 53664697 - 53664632
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| ||||||||||||    
T  53664697 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggagggtttt 53664632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 25754200 - 25754132
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| ||||||| |||||||    
T  25754200 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggg 25754132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 30132043 - 30131867
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| |||| |  |||||| | ||| ||||     
T  30132043 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatttccctcatctggggaaactc 30131944  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   ||   |||||||||||||||||  ||||||| ||||||| ||||||    
T  30131943 aaaaattgtattgggggagggttttggggggttacagagggtttatatgaatttttcaaattcaatctatcttgtta 30131867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 37674297 - 37674181
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| | |||| |  |||| || |||||||||| || || | |||||||||| ||| ||||| |||||||||| | |||||||    
T  37674297 ggaacgagcaagtggaagaaataaaggaaaatgggagaggagggctttggggggttaacttttcttcatgatacaaaaccctcctcattttgaggaacta 37674198  T
Q  202 aaaagttgtattagagg 218  Q
    |||| ||||||| ||||    
T  37674197 aaaaattgtattggagg 37674181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 55439508 - 55439684
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||||||||| ||||    ||| ||||||||| |   |||||  |||||||| ||||  | |||||||| | ||||||     
T  55439508 ggaatgagcaagtggaagaaatagaggacattgggaggagaggactttggaggttaattttttactcataataaaaaatccccctcatttggaggaactc 55439607  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||||| ||| |||||||||   || |||| ||||||||||  ||  ||||||| ||||||||||||||    
T  55439608 aaaaattgtattaggggatggttttggggggttatggaaggtttatatgtttttttcaaattcaatctatgttgtta 55439684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 22225347 - 22225393
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaa 205  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  22225347 atttttcttcataatactaaactctcctcatttaggggaactaaaaa 22225393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 36637782 - 36637900
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    |||||||||| ||||||||| |||| |||||| ||| |||||  || ||||||||||||||||||||  |   ||| |||   ||||||||||||  |||    
T  36637782 tttttcttcaaaatataaaattctcgtcatttggggaaactacgaaattgtattagaggagggttttatggtgtttgggaaaatttatatgaattcttca 36637881  T
Q  260 aatttaatctatgttgtta 278  Q
    |||||||| ||||||||||    
T  36637882 aatttaatatatgttgtta 36637900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 39499204 - 39499298
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||| |||| |||| ||||||| | ||||| |||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  39499204 cctcatttagggaaactcaaaaattgtattgggggaggattttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 39499298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 41099824 - 41099712
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| |||| ||||| ||||| |||| || |||||||||| ||||||| ||||| |||||| || ||||||   |||||||||| ||||  ||||    
T  41099824 ttttcttcacaatacaaaaccctccttatttgggagaactaaaaa-ttgtattggaggaaggtttttgg-aattttacggggtttatataaatttttcaa 41099727  T
Q  261 atttaatctatgttg 275  Q
    |||||||||||||||    
T  41099726 atttaatctatgttg 41099712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 46312578 - 46312404
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||  |||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||  ||||   ||||||||| ||||||||     
T  46312578 ggaaggactaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataatgaaaaatcttcctcatttgggggaactc 46312479  T
Q  202 aaaagttgtattagaggagggttttgggca-attttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    |||| ||||||| | |||||||||| ||   ||| |||||||||||||||||||  ||||||| |||||||||||    
T  46312478 aaaaattgtattgggggagggtttttggaggattatggagggtttatatgaatttttcaaattcaatctatgttg 46312404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 44400634 - 44400758
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| | |||| |  |||| || |||||||||| || || | |||||||||| ||| ||||| ||| |||||| |  ||||||    
T  44400634 ggaatgagcaagtggaagaaataaaggaaaatgggagaggagggctttggggg-ttaacttttcttcatgatacaaaaccctcttcatttggacgaacta 44400732  T
Q  202 aaaagttgtattagaggagggttttg 227  Q
    |||| ||||||| |||||||||||||    
T  44400733 aaaaattgtattggaggagggttttg 44400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 46891311 - 46891486
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcata-atataaaactctcctcatttaggggaact 200  Q
    ||||||||  ||||||||||| ||||||||| || |  || | |||||||||| || ||||||||||| | ||||||||| ||  || ||| |  |||||    
T  46891311 ggaaggagtgagtggaagaaatagaggacattggaag-gaggtgctttggaggctt-atttttcttcaaatatataaaacccttatcgtttggaagaact 46891408  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||| |||||||||||||| ||||||||   |||  |||| ||||||| ||||  ||||||||||| ||||||||||    
T  46891409 aaaaaattgtattagaggagagttttggggggtttgtgaggatttatataaattcttcaaatttaatatatgttgtta 46891486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 47359364 - 47359409
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  47359364 ttttggagggtttatatgaattcttcaaatttaatctatgttgtta 47359409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 49855963 - 49855839
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    ||||||||||||| |||||| ||| ||||| | || || | || ||||| || ||||||||||||||||||| ||||   | ||||||||| |||||| |    
T  49855963 gaaggagcaagtgaaagaaatagatgacattgagagaggaaggttttggggg-ttcatttttcttcataatacaaaataattctcatttagaggaactca 49855865  T
Q  203 aaagttgtattagaggagggttttgg 228  Q
    ||| |||||||  |||||||||||||    
T  49855864 aaaattgtattgaaggagggttttgg 49855839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 19793562 - 19793442
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    ||||||||| |||||  |||||||||||| || | ||||||||||| || ||||  | |||||||||| |   ||||||||||||| ||| | ||  |||    
T  19793562 tttttcttcttaatacgaaactctcctcagttggaggaactaaaaacttatattgaatgagggttttgagaggttttggagggtttgtataagttcttca 19793463  T
Q  260 aatttaatctatgttgttaaa 280  Q
    ||||||||||||||| |||||    
T  19793462 aatttaatctatgttattaaa 19793442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 23163448 - 23163623
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| |||||| |||    ||||||||||||| |   |||||  |||||||| ||||  | ||||||||  |||||||     
T  23163448 ggaaggagcaagtggaagaaatagaagacatcaggaggagagggctttggaggttaattttttactcataataaaaaatgc-cctcatttgagggaactc 23163546  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||||| |||||   || |||||||||||||| ||||  |  |||| ||||||||||||||    
T  23163547 aaaaattgtattgggggagggtcttggggggttatggagggtttatataaatttttttaattcaatctatgttgtta 23163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 35989102 - 35989165
Alignment:
Q  163 ttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| |||||||||||||| ||||||    
T  35989102 ttcttcataatattaaaccctcctaattt-ggggaactaaaaaattgtattagaggagagttttg 35989165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 40119001 - 40118925
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagagg 218  Q
    |||||||||| || || |||||||||||| | | ||||| |||||||||| ||||||||||||| ||||||| ||||    
T  40119001 agggctttggggggttaatttttcttcattaaacaaaaccctcctcatttgggggaactaaaaaattgtattggagg 40118925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 40674127 - 40674207
Alignment:
Q  198 actaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||| || ||| |||||||| | ||| |||| |||||||||||||  | ||||||||| ||||||||||    
T  40674127 actaaaaagttgtattggacgagagttttggggagtttgggagagtttatatgaattctttaaatttaatatatgttgtta 40674207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 49683118 - 49682983
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| |||||||| |||| ||||||| | |||||||||||||   || ||||||    
T  49683118 agggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactcaaaaattgtattgg-ggagggttttgggaggttatggagg 49683020  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||||||  ||||||| ||||||| ||||||    
T  49683019 gttaatatgaatttttcaaattcaatctatcttgtta 49682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 15499402 - 15499280
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    |||| |||||||||||||| ||||   ||||||||| || ||||| |||| ||||||| ||||| | ||||||    ||||| |||||||| || ||||     
T  15499402 ttcacttttcttcataatacaaaatcttcctcatttgggagaactcaaaaattgtattggaggatgattttggagggttttgaagggtttacataaattt 15499303  T
Q  256 atcaaatttaatctatgttgtta 278  Q
     ||||||||||||||||| ||||    
T  15499302 ttcaaatttaatctatgtagtta 15499280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 27681789 - 27681859
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    ||||||||| | |||||||||| ||| |||||| | ||||||||||||||||||| | ||| |||||||||    
T  27681789 atttttcttaaaaatataaaaccctcgtcatttggaggaactaaaaagttgtattggtggaaggttttggg 27681859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 38526117 - 38526253
Alignment:
Q  142 agggctttggaggattcatttttct-tcataatataaaactctcc-tcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttgga 239  Q
    ||||||||||||| || |||||| | ||||||||||||| ||||| |||||| |||||||| |||| ||||||| |  ||||||||||||   || ||||    
T  38526117 agggctttggagg-ttaatttttttctcataatataaaa-tctccctcatttgggggaactcaaaaattgtattgggagagggttttggggggttatgga 38526214  T
Q  240 gggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |  ||||||||||||  ||||||| ||| ||||||||||    
T  38526215 gaatttatatgaatttttcaaattcaatatatgttgtta 38526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 48909021 - 48908904
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || | |||||||| || || | |||||||||||||| ||||| ||| | |||| | ||||||||||| || |    
T  48909021 aagtggaagaaatagaggaaaatgggagaggaaggctttggggg-ttaacttttcttcataatacaaaaccctcataatttggaggaactaaaaaattat 48908923  T
Q  211 attagaggagggttttggg 229  Q
    ||| |||||||||||||||    
T  48908922 attggaggagggttttggg 48908904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 2420714 - 2420759
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  2420714 ttttggagggtttatatgaatttttcaaattcaatctatgttgtta 2420759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 263
Target Start/End: Complemental strand, 3043275 - 3043114
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||| ||||||||| |   |||||  |||||||| ||||  | ||| |||| ||||||||     
T  3043275 ggaaggagcaagtggaagaaatagaagacattgggaggagaggcctttggaggttaattttttactcataataaaaaatccccctgatttgggggaactc 3043176  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatt 263  Q
    |||| ||||||| | |||||||||||||   ||  ||| ||||||||||||||  |||||||    
T  3043175 aaaaattgtattgggggagggttttgggaggttacggatggtttatatgaatttttcaaatt 3043114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 11500085 - 11500201
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| ||||| |||||||||| ||  ||||||||| |||||||   |||||| ||| |    |||||||| ||||| || ||||  ||    
T  11500085 atttttcttcataatagaaaaccctcctcatttgggataactaaaaaattgtatt---ggagggcttttgaaggttttggagagtttacattaattcttc 11500181  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||||||||||    
T  11500182 aaatttaatatatgttgtta 11500201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 34306653 - 34306698
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  34306653 ttttggagggtttatatgaatttttcaaattcaatctatgttgtta 34306698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 36598262 - 36598342
Alignment:
Q  191 taggggaactaaaaagttgtattagagga-gggttttgggcaattttggagggtttatatgaattaatcaaatttaatctat 271  Q
    ||||||||||||||  ||||||| ||||| |  ||||||| |||||| ||||||||| |||||||| |||||||||||||||    
T  36598262 taggggaactaaaatattgtattggaggatgatttttggggaatttt-gagggtttacatgaattattcaaatttaatctat 36598342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 50535196 - 50535135
Alignment:
Q  165 cttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    ||||||||||  |||| |||||||||||||||||||||||| ||||||| ||| ||| ||||    
T  50535196 cttcataatactaaaccctcctcatttaggggaactaaaaaattgtattggagaaggatttt 50535135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 21835598 - 21835666
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||| ||||| |||| || ||| |||| ||||||||||||| |||||||  ||||||||||||||    
T  21835598 ttttcttcgtaatacaaaattcccctaatttgggggaactaaaaatttgtattgaaggagggttttggg 21835666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 44412311 - 44412136
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| || |    |||| |||||||| |   |||||  |||||||| ||||  | |||||||| ||| ||||     
T  44412311 ggaaggagcaagtggaagaaatagaagacattggaaggagagggttttggaggttaattttttactcataataaaaaatccccctcattttggg-aactc 44412213  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| |||||||   |||||||||||||   || |||| ||||||||||||||  | ||||| ||||||||||||||    
T  44412212 aaaaattgtattgagggagggttttggggggttatggaaggtttatatgaattttttaaattcaatctatgttgtta 44412136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 50345746 - 50345679
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||| |||||||||| |||||| ||| ||||||||||| | ||||||| || ||||||||||    
T  50345746 atttttcttcaaaatataaaacactcctcgttt-ggggaactaaagaattgtattggatgagggttttg 50345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 267
Target Start/End: Original strand, 3333848 - 3333953
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaag-ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||| ||||| |||| |||||||||| |||||  ||||||  |||  || ||||| |||||||||  |||| ||||||||||||||||||  ||||    
T  3333848 tttcttcaaaatatgaaaccctcctcattt-ggggagttaaaaaaattgacttggaggaaggttttgggggatttgggagggtttatatgaattcttcaa 3333946  T
Q  261 atttaat 267  Q
    |||||||    
T  3333947 atttaat 3333953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 3458385 - 3458324
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagg 221  Q
    ||||||||||| ||||||||||  ||||| ||| ||||||||||||| ||||||| |||||||    
T  3458385 atttttcttcaaaatataaaaccgtcctcgttt-ggggaactaaaaaattgtattggaggagg 3458324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 27055927 - 27055885
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  27055927 tggagggtttatatgaatttttcaaattcaatctatgttgtta 27055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 33281812 - 33281738
Alignment:
Q  153 ggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||| |||||| ||||||||||||||  |||||||||||  |||||| |||| ||||||| || |||| |||||    
T  33281812 ggatttattttttttcataatataaaatcctcctcatttataggaactcaaaaattgtattggaagaggattttg 33281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 47434343 - 47434301
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  47434343 tggagggtttatatgaatttttcaaattcaatctatgttgtta 47434301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 54126260 - 54126327
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    ||||||||||| ||| ||| ||||||| ||||| || |||||||| |||  |||||||||||||||||||    
T  54126260 ttcatttttctccatgatacaaaactcccctcacttgggggaactcaaa--ttgtattagaggagggttt 54126327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 17642514 - 17642689
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaa-ctctcctcatttaggggaact 200  Q
    ||||| ||||||||||||||| ||| ||||| |||| |  |||| |||||||| |   |||||  |||||||| |||| ||| |||||||| ||||||||    
T  17642514 ggaagaagcaagtggaagaaatagaagacattgggaaaagagggttttggaggttaattttttactcataataaaaaatctc-cctcattt-ggggaact 17642611  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||  || |||||||||||    || |||||| ||||||| ||||  ||||||| |||| |||||||||    
T  17642612 caaaaattgtatcggatgagggttttggaaggttatggaggatttatataaatttttcaaattcaatccatgttgtta 17642689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 27921981 - 27922061
Alignment:
Q  197 aactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| |||||||||||| || ||||||||||||   ||| ||||| |||| |||||||  ||||||||||| ||||||||||    
T  27921981 aactcaaaagttgtattggaagagggttttggggggtttgggagg-tttacatgaattcttcaaatttaatttatgttgtta 27922061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 33982761 - 33982720
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||| ||||||||||||||    
T  33982761 ggagggtttatatgaatttttcaaattcaatctatgttgtta 33982720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 251
Target Start/End: Original strand, 36796347 - 36796496
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||| || || ||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  36796347 ggaaggagcaagtggaagaaatagaagacattgggaggagaggactatgaaggttaattttttactcataataaaaaatccccctcatttgggggaactc 36796446  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatga 251  Q
    |||| ||||||| | ||||| |||||||   || ||||||||||||||||    
T  36796447 aaaaattgtattgggggaggcttttggggggttatggagggtttatatga 36796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 37545234 - 37545275
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    |||||||||||||||||||||| |||||| |||| |||||||    
T  37545234 tttggagggtttatatgaattattcaaatataatatatgttg 37545275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 38592968 - 38593052
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| ||||||| | ||||||||||||    || |||||||||||||||||||  ||||||| ||| ||||||||||    
T  38592968 ggggaactcaaaaattgtatttggggagggttttggagg-ttatggagggtttatatgaatttttcaaattcaatatatgttgtta 38593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 24588386 - 24588314
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    ||||||||||||||||||| ||||  | |||||||| | |||||| |||| ||||||| | ||| ||||||||    
T  24588386 ttcatttttcttcataatacaaaatccccctcatttggaggaactcaaaaattgtattgggggatggttttgg 24588314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 9e-33; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 12708982 - 12708815
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  12708982 aagtggaagaaatagaggaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 12708883  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  12708882 attggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 12708815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 30198919 - 30198752
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |   ||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  30198919 aagtggaagaaatagaggaaaataggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 30198820  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||||||||| | | |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  30198819 attggaggagggttttgaggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 30198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 35959120 - 35959247
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| |||| |||| | ||  | |||||||||| || || |||||||||||||||| ||||| |||||||||| |||||||||    
T  35959120 ggaaggagcaagtggaagaaatagagtacattgtgaggggagggctttgggggtttaatttttcttcataatacaaaaccctcctcatttgggggaacta 35959219  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||||||||||| |||||| ||||||||    
T  35959220 aaaagttgtattggaggagcgttttggg 35959247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 42650601 - 42650736
Alignment:
Q  143 gggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggaggg 242  Q
    ||||||||| || || ||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||   ||| ||| ||    
T  42650601 gggctttgggggttttatttttcttcaaaatataaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttgggaggtttgggatgg 42650700  T
Q  243 tttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||  ||||||||||| ||||| ||||    
T  42650701 tttatatgaattcttcaaatttaatttatgtcgtta 42650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 16535615 - 16535791
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||    |||||||| |||||||||    
T  16535615 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatatccctcatttgggggaacta 16535714  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | | ||||| ||||| |||| |||||||||||||||||||  ||||||||||||||||||||||    
T  16535715 aaaaattgtattggggaagggtcttggggaattatggagggtttatatgaatttttcaaatttaatctatgttgtta 16535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 11976818 - 11976937
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| |||||  | |||||||| |||||||||||||||||||| || |||| ||| ||| | ||||||||||||||||||||||  |     
T  11976818 atttttcttcataatacaaaacatttctcatttaagggaactaaaaagttgtattggatgaggttttaggggagttttggagggtttatatgaatttttt 11976917  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||||||||||    
T  11976918 aaatttaatatatgttgtta 11976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 38136982 - 38136815
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  || | || |||||||||| || || | |||| ||||||||| ||||| || ||||||| | ||||||||||| ||||    
T  38136982 aagtggaagaaatagaggaaaatggaagaggagggctttggggggttaactttttttcataatacaaaacccttctcatttggaggaactaaaaaattgt 38136883  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||||||||| | | |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  38136882 attggaggagggttttgaggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 38136815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 46177083 - 46176957
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||| ||||||||||||| |||| |||| ||||  | |||| ||||| || || ||||||||| |||||| ||||| |||||||||| | ||||||||    
T  46177083 gaaggaacaagtggaagaaatagagtacattgggaggggagggttttggggggttaatttttcttaataatacaaaaccctcctcatttggaggaactaa 46176984  T
Q  203 aaagttgtattagaggagggttttggg 229  Q
    ||||||||||| |||||||||||||||    
T  46176983 aaagttgtattggaggagggttttggg 46176957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 16318541 - 16318717
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || ||||||||   || || | ||||||||||| || ||||| |||||||||| | |||||||    
T  16318541 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttcaggggttaacttttcttcatattacaaaaccctcctcatttggaggaacta 16318640  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||||||| ||| ||   |||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  16318641 aaaaattgtattggaggagggattttgggggttttggagggttaataagaattattcaaatttaatttatgttgtta 16318717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 31529943 - 31530119
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||||||||    |||| |||||||| |   |||||  |||||||| ||||  |||||||||| ||||||||     
T  31529943 ggaaggagcaagtggaagaaatagaagacatcgggaggagagggttttggaggttaattttttactcataataaaaaatcctcctcatttgggggaactc 31530042  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || ||||| |||||||| ||||  ||||||| ||||||||||||||    
T  31530043 aaaaattgtattgggggagggttttggggggttatggagagtttatattaatttttcaaattcaatctatgttgtta 31530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 28175612 - 28175445
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || ||||||||||  | || | |||||||||||||| ||||  |||||||||| | ||||||||||| ||||    
T  28175612 aagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaacttttcttcataatacaaaatcctcctcatttggaggaactaaaaaattgt 28175513  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||  ||||||||||||| |  ||||||||||||| ||| |||||  | ||||||||| ||||||||||    
T  28175512 ataggaggagggttttgagggattttggagggttaataagaattctttaaatttaatttatgttgtta 28175445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 29114381 - 29114264
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  29114381 aagtggaagaaatagaggaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 29114282  T
Q  211 attagaggagggttttgg 228  Q
    ||| ||||||||||||||    
T  29114281 attggaggagggttttgg 29114264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 38317386 - 38317209
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  |||||||||| ||||||||     
T  38317386 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatcctcctcatttgggggaactc 38317287  T
Q  202 aaaagttgtattagaggagggttttgggcaattt-tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||    || |||||||||||||||||||  ||||||  ||||||||||||||    
T  38317286 aaaaattgtattgggggagggttttgggggggttatggagggtttatatgaatttttcaaatccaatctatgttgtta 38317209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 41363969 - 41363793
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||| | ||||||||     
T  41363969 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatgtgggggaactc 41363870  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || ||||||| |||||||||||  ||||||| ||||||||||||||    
T  41363869 aaaaattgtattgggggagggttttggggggttatggagggattatatgaatttttcaaattcaatctatgttgtta 41363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 8827915 - 8827801
Alignment:
Q  163 ttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaat 262  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||  ||||  |||||||    |||| |||||||||||| ||||  ||||||    
T  8827915 ttcttcataatacaaaactctcctcattt-gggaaactaaaaagttgtattcaaggatcgttttggaaggttttagagggtttatatcaattcttcaaat 8827817  T
Q  263 ttaatctatgttgtta 278  Q
    ||||||||||||||||    
T  8827816 ttaatctatgttgtta 8827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 46670045 - 46669926
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||| ||||||||||  |||||||||||| |||||||||| ||  |||||||| | | |  |||||||||||||||||  |     
T  46670045 atttttcttcaaaatataaaaccctcctcatttgagggaactaaaaaattgtattagaagaaagttttgggaagtgtgagagggtttatatgaattcttt 46669946  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| ||||||||||    
T  46669945 aaatttaatatatgttgtta 46669926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 49668260 - 49668134
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||| | |  ||||  | | ||||||||||| || | ||||||||||||||| |||| ||||||||||| ||||||||    
T  49668260 ggaatgagcaagtggaagaaatagagaaaaatgggagggtacggctttggagg-ttaacttttcttcataatattaaaccctcctcatttaagggaacta 49668162  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||| ||||||| |||||||||||||||    
T  49668161 aaaaattgtattggaggagggttttggg 49668134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 52636690 - 52636858
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    |||||||||||||||| |||| |||| || | |  |||||||||| || || |||||||||||||||||||||| |||||||||| || ||||| ||||     
T  52636690 gagcaagtggaagaaatagagtacattggaagatgagggctttggggggttaatttttcttcataatataaaaccctcctcattt-ggagaact-aaaac 52636787  T
Q  207 ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||  || ||||||||| |  | ||| |||||||||| ||||||| ||||||||  ||||||||||||    
T  52636788 ttgtattgaagtagggttttgaggga-tttagagggtttatgtgaattattcaaatttgttctatgttgtta 52636858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 13269877 - 13270053
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaac 199  Q
    ||||||||||||||||||||| ||| ||||||| || ||| ||||||||| ||| |   ||||||||||||||| |||| ||||| |||||| || ||||    
T  13269877 ggaaggagcaagtggaagaaatagaagacatcgtga-agagagggctttgaaggttaattttttcttcataataaaaaa-tctccctcatttgggagaac 13269974  T
Q  200 taaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    | |||| |||||||   |||||||||||||   || ||| |||||||||||||||  ||||||| ||||||||||||||    
T  13269975 tcaaaaattgtattgtgggagggttttggggggttatggggggtttatatgaatttttcaaattcaatctatgttgtta 13270053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 7182348 - 7182172
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcat-ttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| | ||    || |||||||||| || || ||||  |||||||| ||||  | |||||||| ||||||||    
T  7182348 ggaaggagcaagtggaagaaatagaagacattgagaggagagagctttggagg-ttaatcttttactcataataaaaaatccccctcatttgggggaact 7182250  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  7182249 caaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 7182172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 9119885 - 9119768
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||  ||||||| ||||||||||||| |  |||| ||| | ||||||||||||  ||    
T  9119885 atttttcttcaaaatataaaactctcctcattt-gggaaactaaaatattgtattggaggagggttttgag-tatttgggaagatttatatgaattcttc 9119788  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||| || |||||||    
T  9119787 aaatttaatatacgttgtta 9119768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 21081274 - 21081413
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| | ||  | |  | |||||||| ||||||||||||||||| | ||||| |||||||||| ||| ||||     
T  21081274 ggaaggagcaagtggaagaaatagatgacattgagaggggaatgttttggagggttcatttttcttcataaaacaaaaccctcctcatttggggtaactt 21081373  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||| ||||||| || ||| |||||||| | |||||||||    
T  21081374 aaaaattgtattggatgagagttttggggagttttggagg 21081413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 276
Target Start/End: Complemental strand, 56504625 - 56504452
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    |||||||||||||| |||||| ||| ||||| ||||    ||||||||||||| |   ||||| | ||||||| |||| ||||| |||||| ||||||||    
T  56504625 ggaaggagcaagtgcaagaaatagaagacattgggaggagagggctttggaggttaattttttatacataatacaaaa-tctccctcatttgggggaact 56504527  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgt 276  Q
     |||| ||||||| | |||||||||||||   ||| ||||||||||||||||||  ||||||| ||||||||||||    
T  56504526 caaaaattgtattgg-ggagggttttgggaggtttcggagggtttatatgaatttttcaaattcaatctatgttgt 56504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 42759754 - 42759640
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||| ||||||||||   | || |||||||||| |||||||| |||| ||||| ||||||||||||||| |  || |||||||||||| |||||||     
T  42759754 ttcatttatcttcataattctataccctcctcatttgggggaactcaaaaattgtactagaggagggttttgagggatcttggagggtttacatgaattt 42759655  T
Q  256 atcaaatttaatcta 270  Q
     ||||||||||||||    
T  42759654 ttcaaatttaatcta 42759640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 45823484 - 45823605
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    |||||||||||||||| |||||| |  ||||   ||||| ||| |||| || | |||||||||||||| |||||||||||||||| ||| |||| ||||     
T  45823484 gagcaagtggaagaaatagaggaaaatgggaggtaagggttttagagggttaacttttcttcataatacaaaactctcctcatttggggaaacttaaaaa 45823583  T
Q  207 ttgtattagaggagggttttgg 228  Q
    |||||||  |||||||||||||    
T  45823584 ttgtattgaaggagggttttgg 45823605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 24279838 - 24280014
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||||||||||||| || | | ||||| ||||    ||||||||||| | |   |||||  |||||||| |||| || | |||||| | | ||||     
T  24279838 ggaaggagcaagtggaaggaataaaagacattgggaggagagggctttggaagttaattttttactcataataaaaaattcccttcatttggcgaaactc 24279937  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||||||||||||||||||    
T  24279938 aaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatttaatctatgttgtta 24280014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 52430668 - 52430589
Alignment:
Q  146 ctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    |||| ||||| | ||||||||||| ||||||||||||||||||||||||| ||||||||| || |||| ||||| |||||    
T  52430668 ctttagaggacttatttttcttcaaaatataaaactctcctcatttagggaaactaaaaaattatattggaggatggttt 52430589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 13985077 - 13984995
Alignment:
Q  146 ctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||  | ||||||||| | |||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||    
T  13985077 ctttggagggcttatttttctttaaaatataaaaccctcttcatttagtggaactaaaaaattgtattggaggagggttttgg 13984995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 20533933 - 20534027
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||  ||||||||||||||    
T  20533933 cctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgttgtta 20534027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 33500444 - 33500620
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggagga-ttcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    |||| |||||||||||||||| |||||| |  |||| || |||||||| ||||| || | ||| |||||||| | ||||| |||||||||| | ||||||    
T  33500444 ggaatgagcaagtggaagaaatagaggaaaatgggagaggagggcttt-gaggagttaactttccttcataagacaaaaccctcctcatttggaggaact 33500542  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaattt-aatctatgttgtta 278  Q
    |||||  |||||| | |||||||||||||    ||||||||||| ||| |||||  |||||||| ||||||||||||||    
T  33500543 aaaaaaatgtatt-ggggagggttttggggggctttggagggttaataagaatttttcaaatttaaatctatgttgtta 33500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 41844441 - 41844535
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||||| |||||||||||||   || |||||||||||||||||||  ||||||  ||||||| ||||||    
T  41844441 cctcatttgggggaactcaaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatcttgtta 41844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 44076567 - 44076644
Alignment:
Q  141 aagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagagga 219  Q
    ||||||||||| ||||| |||||||||||||||| |||||||| |||| ||| |||||||||||| ||||||| |||||    
T  44076567 aagggctttgggggattaatttttcttcataatacaaaactcttctcactta-gggaactaaaaaattgtatttgagga 44076644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 45971544 - 45971636
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    ||||||||||||||  |||| | |||||||| ||||||||||||| ||||||| ||||||| |||| ||  |||||||| ||||||||||||||    
T  45971544 ttttcttcataatactaaaccc-cctcatttgggggaactaaaaaattgtattggaggaggatttttggggattttggaaggtttatatgaatt 45971636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 271
Target Start/End: Original strand, 904122 - 904290
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||||||||||||||||| ||| |||||  |||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| |||||||| |    
T  904122 gaaggagcaagtggaagaaatagaagacattcggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactca 904221  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctat 271  Q
    ||| |||||||   |||||||||||||   || ||||| |||||||||||||  ||||||| |||||||    
T  904222 aaaattgtattgagggagggttttggggggttatggagagtttatatgaatttttcaaattcaatctat 904290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 13270430 - 13270256
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||| ||| ||||  | |||||||| |||||| |     
T  13270430 ggaaggagcaagtggaagaaatagaagacattgggagtagagggctttggaggttaattttttactcatgataaaaaatccccctcattt-ggggaattc 13270332  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  13270331 aaaaattgtattgg-ggagggttttaggaggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 13270256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 15498870 - 15498783
Alignment:
Q  182 ctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatcta 270  Q
    |||||||||| |||||||| |||| ||||||| || |||||||||||||  |||||||||||||| |||||||  | ||||||||||||    
T  15498870 ctcctcattt-ggggaactcaaaaattgtattggatgagggttttgggcggttttggagggtttacatgaattctttaaatttaatcta 15498783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 21443004 - 21443111
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||| |||||||||| | ||||||||||| || |||||||| || |||||||  | ||| | | ||||||||||||||  ||    
T  21443004 atttttcttcaaaatataaaaccctcctcattt-gaggaactaaaaaattatattagagaagagttttggagagtttagaaaggtttatatgaattcttc 21443102  T
Q  259 aaatttaat 267  Q
    |||||||||    
T  21443103 aaatttaat 21443111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 368001 - 368119
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    ||||||||||||||| |||||| |   ||| ||||||||||||| |  || |||||||||||||||| ||||| |||||||||| ||||| || |||| |    
T  368001 agcaagtggaagaaatagaggaaaataggagagaagggctttgggg--ttaatttttcttcataatacaaaaccctcctcatttgggggagctcaaaa-t 368097  T
Q  208 tgtattagaggagggttttggg 229  Q
    | ||||  ||||||||||||||    
T  368098 tatattgaaggagggttttggg 368119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 47669792 - 47669910
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    |||||| |||||||| |||||   |||||||| | |||||| |||| ||||||| | |||| |||||||    || |||||||||||||||||||  |||    
T  47669792 tttttcctcataataaaaaacctccctcatttggaggaactcaaaaattgtattgggggagagttttggagggttatggagggtttatatgaatttttca 47669891  T
Q  260 aatttaatctatgttgtta 278  Q
    |||| ||||||||||||||    
T  47669892 aattcaatctatgttgtta 47669910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 3127085 - 3126993
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||| |||| ||||||| |||||||||||| ||   ||  ||||||||||||||||||  ||||||| ||||||||||||||    
T  3127085 ctcatttgggggaactcaaaaattgtattggaggagggttttcgggg-ttaaggagggtttatatgaatttttcaaattcaatctatgttgtta 3126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 32649070 - 32648985
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| | |||| ||||||| | |||||||||||||   || |||| ||||||||||||||  ||||||||||||||||||||||    
T  32649070 ggggaattcaaaaattgtattgggggagggttttggggggttatggaaggtttatatgaatttttcaaatttaatctatgttgtta 32648985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 49404697 - 49404604
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||| |||| ||||||| | | |||||||||||   || || ||||||||||||||||  ||||||| ||||||||||||||    
T  49404697 ctcatttgggggaactcaaaatttgtattggggaagggttttgggaggttatgcagggtttatatgaatttttcaaattcaatctatgttgtta 49404604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 27143158 - 27143278
Alignment:
Q  159 atttttcttcataatataaaactctcctcattt-aggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaat 257  Q
    ||||||||| |||||||||||||||| ||||||  || |||||||||| ||||||| || |||| ||||| |   |||  || ||||||||||||||  |    
T  27143158 atttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtattggatgaggattttgtggggtttgagacggtttatatgaattctt 27143257  T
Q  258 caaatttaatctatgttgtta 278  Q
    |||||||||| ||| ||||||    
T  27143258 caaatttaatatatattgtta 27143278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 32866829 - 32866716
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| |||  |||||||||||  |||||||||||| |||||   |||||| ||||||     ||||  || |||||||||||||| ||    
T  32866829 atttttcttcataatacaaagttctcctcattt--gggaactaaaaaattgtagcggaggagagttttgacgggttttaaagagtttatatgaattattc 32866732  T
Q  259 aaatttaatctatgtt 274  Q
    ||||||||||||||||    
T  32866731 aaatttaatctatgtt 32866716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 37756870 - 37756747
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  37756870 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 37756771  T
Q  202 aaaagttgtattagaggagggttt 225  Q
    |||| |||| || |||||||||||    
T  37756770 aaaaattgtgttggaggagggttt 37756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 205
Target Start/End: Original strand, 48620204 - 48620306
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||||||||| || |  || ||||||||| ||  | ||||| ||||| |||||||||| |||||||| | |||||||||    
T  48620204 ggaaggagtaagtggaagaaatagaggacattggaag-gaggggctttggggggcttattttacttcaaaatataaaaccctcctcatctgggggaacta 48620302  T
Q  202 aaaa 205  Q
    ||||    
T  48620303 aaaa 48620306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 54205760 - 54205873
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggagga---ttcatttttcttcataatataaaactctcctcatttaggggaa 198  Q
    ||||||||||||||||||||| ||||||| | | ||  | |||||||||| ||    ||||||||||||||||| | ||||  |||||||||| ||||||    
T  54205760 ggaaggagcaagtggaagaaatagaggactttgagaggggagggctttgggggggggttcatttttcttcataaaacaaaatcctcctcatttgggggaa 54205859  T
Q  199 ctaaaaagttgtat 212  Q
    || |||| ||||||    
T  54205860 ctcaaaaattgtat 54205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 278
Target Start/End: Original strand, 7485815 - 7485917
Alignment:
Q  176 aaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||| ||||| |||||| |||||||||||  | |||| | |||||||||| ||   |||||||||||| ||| |||||  | |||||||||||||||||    
T  7485815 aaaaccctccttatttagaggaactaaaaaaatttattgggggagggttttaggaggttttggagggttaataagaattttttaaatttaatctatgttg 7485914  T
Q  276 tta 278  Q
    |||    
T  7485915 tta 7485917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 17622545 - 17622456
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||||| |||||||| |||| ||||||| | |||||||||||||   || |||||||| ||||||||||  ||||||| |||||||||||    
T  17622545 ctcatttgggggaactcaaaaattgtattgggggagggttttggg-ggttatggagggtctatatgaatttttcaaattcaatctatgttg 17622456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 277
Target Start/End: Original strand, 30307356 - 30307468
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| |||||||||  |||||||||| ||||||||||||| |||||||    ||||||||||||   | | |||||| |||||||||||  ||||    
T  30307356 ttttcttcaaaatataaaatcctcctcatttgggggaactaaaaaattgtatt---tgagggttttggggggtgtaggaggg-ttatatgaattcttcaa 30307451  T
Q  261 atttaatctatgttgtt 277  Q
    ||||||| |||| ||||    
T  30307452 atttaatatatgctgtt 30307468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 55509932 - 55509974
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  55509932 ttttggagggtttatatgaattcttcaaatttaatctatgttg 55509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 516025 - 516114
Alignment:
Q  139 agaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    ||||| |||||| | |||| |||||||||||||||| |||| |||||||||| || | |||| |||| |||||| ||| ||| |||||||    
T  516025 agaagagctttgaaagatttatttttcttcataatacaaaattctcctcattcagagaaactcaaaaattgtataagatgagagttttgg 516114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 15451422 - 15451325
Alignment:
Q  170 taatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatct 269  Q
    ||||| ||||| |||||||||| |||||||| |||  || ||||  | |||||||||||||  |||||||||||||| |||||||  |||||||||||||    
T  15451422 taatacaaaaccctcctcattt-ggggaactcaaa--ttttattgtatgagggttttgggcggttttggagggtttacatgaattcttcaaatttaatct 15451326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 48830972 - 48830795
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||  ||| ||||  |||| |||||| || |||||    
T  48830972 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcaagataaaaaaacctccctcatttgggagaact 48830873  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || ||||| |||| ||||||||  ||||||| |||| |||||||||    
T  48830872 caaaaattgtattgggggagggttttggggggttatggagtgtttgtatgaatttttcaaattcaatcaatgttgtta 48830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 52594698 - 52594607
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||| |||| ||||||| | ||||||||||||    || |||||||||||||||||||  |||||| |||||||||||||||    
T  52594698 ctcatttgggggaactcaaaaattgtattgg-ggagggttttggagg-ttatggagggtttatatgaatttttcaaatctaatctatgttgtta 52594607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 21296262 - 21296086
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||| ||||| ||||   |||| ||||| ||| |   |||||  |||||||| ||||  | ||| |||| || |||||     
T  21296262 ggaaggagtaagtggaagaaatagaagacattgggaggaaaggactttgtaggttaattttttactcataataaaaaatcccccttatttgggagaactc 21296163  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||||||||| |  ||| ||||  |||||||| ||||  ||||||| ||||||||||||||    
T  21296162 aaaaattgtattgggggagggttttgagggattatggatcgtttatataaatttttcaaattgaatctatgttgtta 21296086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 4442079 - 4442012
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    ||||||||||| |||||||||| ||||||||||  |||| ||| ||| ||||||| || |||||||||    
T  4442079 atttttcttcaaaatataaaaccctcctcatttgagggagctacaaaattgtattggaagagggtttt 4442012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 25843825 - 25843939
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||| |||||||| |||||||| ||||||| ||| |||| ||||  |||||| ||||||| |||| |  | ||||| ||| |||||| |||||  ||    
T  25843825 atttttcatcataatacaaaactcttctcatttggggaaactcaaaaagtgtattggaggaggatttttgagagttttg-aggatttataagaatttttc 25843923  T
Q  259 aaatttaatctatgtt 274  Q
    ||||||||| ||||||    
T  25843924 aaatttaatttatgtt 25843939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 45899379 - 45899444
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||||||| |||| || ||| |||| ||||||||||||| ||||||| ||||||||||||||    
T  45899379 ttttcttcataatacaaaa-tcccctaattt-ggggaactaaaaaattgtattggaggagggttttgg 45899444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 28880045 - 28880091
Alignment:
Q  232 attttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  28880045 attttggaggatttatatgaattcttcaaatttaatatatgttgtta 28880091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 29576234 - 29576189
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaa 205  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||    
T  29576234 atttttcttcaaaatataaaacgctcctcattt-ggggaactaaaaa 29576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 32060704 - 32060746
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  32060704 tggagggtttatatgaatttttcaaattcaatctatgttgtta 32060746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 32948549 - 32948507
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  32948549 tggagggtttatatgaatttttcaaattcaatctatgttgtta 32948507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 47063674 - 47063727
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtatt 213  Q
    ||||||||| | |||||||||| |||||||||| ||||||||||||| |||||||    
T  47063674 atttttctttaaaatataaaaccctcctcattt-ggggaactaaaaaattgtatt 47063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 49936493 - 49936555
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagagg 218  Q
    |||| |||||||||||||| ||||  ||||| |||| ||||||||||||| ||||||| ||||    
T  49936493 ttcacttttcttcataatacaaaatcctcctaatttgggggaactaaaaaattgtattggagg 49936555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 40423095 - 40423054
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| |||||||||||||  ||||||||||||||||||||||    
T  40423095 ggagagtttatatgaattcttcaaatttaatctatgttgtta 40423054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 18396190 - 18396258
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||| |||||||||| |||| |||||   |||||||||||   ||||| |||||||||||||    
T  18396190 atttttcttcaaaatataaaaccctccccatttgatggaactaaaaaacagtattggaggagggttttg 18396258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 20896415 - 20896375
Alignment:
Q  238 gagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||| ||||||||||  ||||||||||    
T  20896415 gagggtttatatgaattattcaaatttaacatatgttgtta 20896375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 36553887 - 36553831
Alignment:
Q  169 ataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    ||||||||||||||||||| ||| |  |||||||||| ||||||| ||| |||||||    
T  36553887 ataatataaaactctcctcgtttggaagaactaaaaaattgtatttgagtagggttt 36553831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 48620312 - 48620348
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttggg 229  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  48620312 ggggaactaaaaaattgtattggaggagggttttggg 48620348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 52555060 - 52554980
Alignment:
Q  198 actaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| ||||||| || ||| |||||||| |  |||| ||||||||||||||||  | |||||||| |||||| ||||    
T  52555060 actaaaaaattgtattggatgagagttttgggaaggtttgaagggtttatatgaattctttaaatttaacctatgtagtta 52554980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 280
Target Start/End: Complemental strand, 42113114 - 42112938
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||||  ||| |||| || |||  ||||| || || ||||||||||||||||  ||||||||||||||| |||||||||    
T  42113114 ggaaggagcaagtggaagaaatagagtccattgggagaggaggt-tttggggggttaatttttcttcataatactaaactctcctcattt-ggggaacta 42113017  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgttaaa 280  Q
    |||||||||||| ||  |||||||||||   ||| ||||||||||||||||||  ||||||||| || |||||||||||    
T  42113016 aaaagttgtattggaatagggttttggggggtttaggagggtttatatgaatttttcaaatttattcaatgttgttaaa 42112938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 2826345 - 2826228
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||  |||| |||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||| | ||||||||||||  ||||    
T  2826345 ttttcttcataatactaaaccctcctcatttgggggaactaaaaaattgtattggaggagggttttgggggattttggaagctttatatgaattcttcaa 2826246  T
Q  261 atttaatctatgttgtta 278  Q
    |||||||| |||||||||    
T  2826245 atttaatcaatgttgtta 2826228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 38505491 - 38505325
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  ||||  | |||||||||| || || | |||||||||||||| ||||| |||||||||| |||||||||    
T  38505491 ggaatgagcaagtggaagaaatagaggaaaatgggaggggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaacta 38505392  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     ||| ||||||| ||||||||||          ||||||||||||||||||||  ||||||||||||||||||||||    
T  38505391 taaaattgtattggaggagggtt----------ttggagggtttatatgaattcttcaaatttaatctatgttgtta 38505325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 13697263 - 13697371
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| || || |||| |||| | ||||||||||||||||| ||||  ||    
T  13697263 atttttcttcataatacaaaaccctcctcatttgggggaactaaaaagttgtattggaagacggttgtgggaagttttggagggtttatattaattcttc 13697362  T
Q  259 aaatttaat 267  Q
    |||||||||    
T  13697363 aaatttaat 13697371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 16805715 - 16805548
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| |||||  || |||||| | ||||||||||| ||||    
T  16805715 aagtggaagaaagagaggaaaatgggagaggagggctttgggggtttaacttttcttcataatacaaaaccttcttcatttggaggaactaaaaaattgt 16805616  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||||||||||||   |||||||||||| ||| |||||  | ||||||||| ||||||||||    
T  16805615 attggaggagggttttggggggttttggagggttaataagaattcttaaaatttaatttatgttgtta 16805548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 15749106 - 15748930
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || || ||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  15749106 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 15749007  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| || ||||| ||| ||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  15749006 aaaaattgtattggatgagggattttgggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 15748930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 1277863 - 1278038
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| ||| |||||||| ||| ||||||||| ||||  || ||||||||| ||  | ||||||||||| ||||||||||  ||||||||| |||||||||    
T  1277863 ggaatgagaaagtggaaaaaatagaggacattgggag-gaggggctttggggggcttatttttcttcaaaatataaaaccatcctcattttggggaacta 1277961  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| || ||| |||| ||    |||  |||||||||||||||||  ||||||||||| ||||||||||    
T  1277962 aaaaattgtattggatgagagtttcggaaggtttgagagggtttatatgaattcttcaaatttaatatatgttgtta 1278038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 23620950 - 23620774
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  | |||||| ||||  | |||||||| ||||||||     
T  23620950 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttacttataataaaaaatccccctcatttgggggaactc 23620851  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||||||   || |||| ||||||||||||||  ||||||| ||||||||||||||    
T  23620850 aaaaattgtatttggggagggttttggggggttatggatggtttatatgaatttttcaaattcaatctatgttgtta 23620774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 30080955 - 30081072
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| ||| ||||||  || ||| ||||| |||||||  | ||||||||||||  ||||| |||||||||||||||||  |||     
T  30080955 ttttcttcataatacaaaaccctcatcatttgaggaaacaaaaaaattgtattgaaagagggttttgggagattttagagggtttatatgaattcttcag 30081054  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  30081055 atttaatctatgttgtta 30081072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 33872209 - 33872101
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||  |||| |||||||||| |||||||||| || ||||||| ||||||||||||         |||||||||||||||||||  ||||    
T  33872209 ttttcttcataatactaaaccctcctcatttgggggaactaacaaattgtattggaggagggtttt---------tggagggtttatatgaattcttcaa 33872119  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  33872118 atttaatctatgttgtta 33872101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 28437699 - 28437523
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| | | ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  28437699 ggaaggagcaagtggaagaaataaaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 28437600  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||| || |||||||   || |||||||||||||| ||||  ||||||| ||||||||||||||    
T  28437599 aaaaattgtattggaggtggattttggggggttatggagggtttatatcaatttttcaaattcaatctatgttgtta 28437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 3658668 - 3658492
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    || ||||||| || |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  3658668 ggaaggagcaagtggaagaaatagaagacattgggaggagagagctttgggggttaattttttactcataataaaaaatccccctcatttgggggaactc 3658569  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||| ||   || ||||||| |||||||||||  ||||||| ||||||||||||||    
T  3658568 aaaaattgtattgggggagggttttagggggttatggagggattatatgaatttttcaaattcaatctatgttgtta 3658492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 33406789 - 33406613
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||| ||| |   |||||  |||||||| ||||  | ||||||||  |||||||     
T  33406789 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttgaaggttaattttttactcataataaaaaatccccctcatttgagggaactc 33406690  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |  ||||||||||||   || |||||||||||||| ||||  ||||||| ||||||||||||||    
T  33406689 aaaaattgtattgggagagggttttggggggttatggagggtttatatcaatttttcaaattcaatctatgttgtta 33406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 42620508 - 42620333
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| |||| || |||||||| ||||||||     
T  42620508 ggaatgagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaattcccctcattt-ggggaactc 42620410  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||| ||||| |   || |||||||||||||||||||  ||||||| ||||||| ||||||    
T  42620409 aaaaattgtattgggggaggattttgaggggttatggagggtttatatgaatttttcaaattcaatctatattgtta 42620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 4788101 - 4787984
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||||||||   |||| |||| ||||||||||||| ||||||| ||| ||||||||| |  |||| |||||||||| |||||||  ||    
T  4788101 atttttcttcataatataaaatcatccttattt-ggggaactaaaaaattgtattggagtagggttttgagggatttgggagggttta-atgaatttttc 4788004  T
Q  259 aaatttaatctatgttgtta 278  Q
    || |||||| ||||||||||    
T  4788003 aattttaatatatgttgtta 4787984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 23550769 - 23550887
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||||||||||||||  |  |||||| |||||||||||  |||||||| ||||||| ||||| |   | ||| ||||||||||||||||  ||    
T  23550769 atttttcttcataatataaaacctttttcatttgggggaactaaagcgttgtattggaggaggattttgagtggtattgaagggtttatatgaattcttc 23550868  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||| ||||||||||||||||    
T  23550869 aaa-ttaatctatgttgtta 23550887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 38137865 - 38137991
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggcttt-ggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    |||||||||| ||||||||||  |||||||| ||||  | ||| |||| ||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||    
T  38137865 ggaaggagcacgtggaagaaatggaggacattgggaggggaggactttaggagg-ttcatttttcttcataatacaaaatcctcctcatttgggggagct 38137963  T
Q  201 aaaaagttgtattagaggagggttttgg 228  Q
     |||| ||||||| ||||||||| ||||    
T  38137964 caaaatttgtattggaggagggtattgg 38137991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 41002343 - 41002232
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||| |||| || |||||||| |||||||| |||| || |||| | |||||||||| ||   || |||||||||||||||||||  ||||||| ||    
T  41002343 tcataataaaaaattcccctcatttgggggaactcaaaaattatattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaa 41002244  T
Q  267 tctatgttgtta 278  Q
    ||||||||||||    
T  41002243 tctatgttgtta 41002232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 6746686 - 6746560
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || || ||||||||| |||||| |||||| ||||||||| |||||||| |||| ||||||| |||| ||| |||||          |||    
T  6746686 agggctttggggggttaatttttctttataatacaaaactttcctcatttgggggaactcaaaaattgtattggagggggggtttgg----------agg 6746597  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  |||||||||| |||||||||||    
T  6746596 gtttatatgaattcttcaaatttaacctatgttgtta 6746560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 44487437 - 44487356
Alignment:
Q  140 gaagggctttggagga-ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggag 220  Q
    |||||||||||| ||| || | ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||    
T  44487437 gaagggctttgggggagtttacttttcttcaaaatataaaattctcctcatttagaggaactaaaaaattgtattggaggag 44487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 278
Target Start/End: Original strand, 31891223 - 31891376
Alignment:
Q  115 ggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtatta 214  Q
    |||||||| ||||||||| ||||    |||| | |||||| ||||||||||||||||||| ||||  || |||| || ||||||||||||| |||||||     
T  31891223 ggaagaaatagaggacattgggatgagagggttatggaggtttcatttttcttcataatacaaaatgcttctcaattgggggaactaaaaacttgtattt 31891322  T
Q  215 gaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     | ||||          ||||||||| |||||||||||||  ||||||||||||||||||||||    
T  31891323 aaagagg----------attttggagagtttatatgaattcttcaaatttaatctatgttgtta 31891376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 7391508 - 7391395
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||| ||||| |||| ||||||||||||| | ||||| || ||||||||||||  || | ||||| ||||||||||||  |     
T  7391508 atttttcttcaaaatataaaaccctccttattt-ggggaactaaaaaat-gtattggatgagggttttgggggatctgggaggatttatatgaatttttt 7391411  T
Q  259 aaatttaatctatgtt 274  Q
    ||||||||| ||||||    
T  7391410 aaatttaatatatgtt 7391395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 23772639 - 23772524
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| ||||||||| ||||||||||| ||  || |||||| || |||||  ||||| |||||||  |||| | || |||||||||||||  ||    
T  23772639 atttttcttcaaaatataaaaatctcctcatttgggaaaattaaaaaattatattaagggaggattttgggggatttggaagagtttatatgaattcttc 23772540  T
Q  259 aaatttaatctatgtt 274  Q
    ||||||||| ||||||    
T  23772539 aaatttaatatatgtt 23772524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 31055359 - 31055425
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||| | |||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  31055359 tttctttaaaatataaaaccctcctcattt-ggggaactaaaaaattgtattggaggagggttttggg 31055425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 42267106 - 42266988
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| ||||||||  |||||| || ||| | |||| ||||||| ||||| ||||||||    ||||  |||||||||||||||   ||    
T  42267106 atttttcttcataatacaaaactcttatcattt-ggagaattcaaaaattgtattggaggaaggttttggaaggttttttagggtttatatgaatgcttc 42267008  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  42267007 aaatttaatctatgttgtta 42266988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 43778727 - 43778556
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    ||||||||||||||| ||| ||||| || | |  |||||| |||||| |   |||||  |||||||| |||| || ||||||||   ||||||||||| |    
T  43778727 agcaagtggaagaaatagaagacattggaagaagagggctatggaggttaattttttactcataataaaaaattcccctcatttgaaggaactaaaaaat 43778628  T
Q  208 tgtattagaggagggttttgggcaattttggagggtttatatgaa-ttaatcaaatttaatctatgttgtta 278  Q
    |||||| | |||||||||||||   || ||||||||||||||||| ||  ||||||| ||||||| ||||||    
T  43778627 tgtattgggggagggttttggggggttatggagggtttatatgaattttttcaaattcaatctatattgtta 43778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 43348327 - 43348220
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||| |||||||||  |||  ||||| |||| ||||||||||||| ||||||||||||||||||          |||||||||| |||||||||  ||||    
T  43348327 tttttttcataatactaaatcctccttatttgggggaactaaaaaattgtattagaggagggtt----------ttggagggttaatatgaattcttcaa 43348238  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  43348237 atttaatctatgttgtta 43348220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 43741688 - 43741754
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    |||||||||||||| |||||||||||||||| || ||||| |||| |||||||| |||||| |||||    
T  43741688 ttttcttcataatacaaaactctcctcatttgggagaactcaaaaattgtattaaaggaggattttg 43741754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 3571916 - 3571740
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| || | ||| ||| ||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||    
T  3571916 ggaaggagcaagtggaagaaatagaagacattggaa-agagaggactttggaggttaattttttactcataataaaaaatccccctcatttgggggaact 3571818  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| |||||||   |||||||||||||   || | ||| |||||||||||||  ||||||  ||||||||||||||    
T  3571817 caaaaattgtattgcgggagggttttggggggttatagagtgtttatatgaatttttcaaatccaatctatgttgtta 3571740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 5968200 - 5968034
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||   ||| |||||||||| |   |||||  |||||| | ||||  | |||||||| ||||||||     
T  5968200 ggaaggagcaagtggaagaaatagaagacattgggaggaaagcgctttggaggttaattttttactcataacaaaaaatccccctcatttgggggaactc 5968101  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||||| ||||||          || |||||||||||||||||||  ||||||| ||||||||||||||    
T  5968100 aaaaattgtattaggggaggg----------ttatggagggtttatatgaatttttcaaattcaatctatgttgtta 5968034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 32820330 - 32820227
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||| ||||| |||| | ||||| ||| ||||||||||||||||||||| ||| ||||||||| |   ||||||||| ||||||||||||  ||    
T  32820330 atttttcttcctaatacaaaattatcctcgttt-ggggaactaaaaagttgtattggagaagggttttgtg-ggttttggaggatttatatgaattcttc 32820233  T
Q  259 aaattt 264  Q
    ||||||    
T  32820232 aaattt 32820227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 17818289 - 17818353
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    ||||||||| |||| ||||| ||| |||||||| ||||||||||| ||||||| |||||||||||    
T  17818289 ttttcttcagaatacaaaaccctcatcatttagaggaactaaaaaattgtattggaggagggttt 17818353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 274
Target Start/End: Complemental strand, 21018797 - 21018682
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||||||||||||||| | ||  |||||| ||| | ||||||||||| ||||||   | ||||||||| ||  ||||| || ||||||||||||||     
T  21018797 ttcatttttcttcataatacagaatcctcctcgtttggaggaactaaaaaattgtat---atgagggttttaggtgattttagaaggtttatatgaattt 21018701  T
Q  256 atcaaatttaatctatgtt 274  Q
     |||||| |||||||||||    
T  21018700 ttcaaatctaatctatgtt 21018682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 277
Target Start/End: Complemental strand, 34652208 - 34652035
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  | |||||| ||||  | |||||||| ||||||||     
T  34652208 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttacttataataaaaaatccccctcatttgggggaactc 34652109  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtt 277  Q
    |||| ||||||| | |||||||||||||   || ||| ||| |||||| ||||  ||||||| ||||||| |||||    
T  34652108 aaaaattgtattgggggagggttttggg--gttgtggggggcttatatcaatttttcaaattcaatctattttgtt 34652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 31180125 - 31179999
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgg---gacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaa 198  Q
    |||| ||| |||||||||||| ||||||||| ||   |  || |||||||||| ||  | ||||||||||| |||||||||||||||||||||  | | |    
T  31180125 ggaatgagtaagtggaagaaatagaggacattggattgtaagtagggctttgggggtcttatttttcttcaaaatataaaactctcctcattt--gagga 31180028  T
Q  199 ctaaaaagttgtattagaggagggttttg 227  Q
    ||||||| ||||||| |||||| ||||||    
T  31180027 ctaaaaaattgtattggaggagagttttg 31179999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 42253942 - 42254009
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||| || ||||  ||||||||||||||    
T  42253942 tttcttcataatacaaaaccctcctcatttggaggaactaaaaaattatattgaaggagggttttggg 42254009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 45940498 - 45940431
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||| ||||||| ||| || |||||||    
T  45940498 ttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgtattggagtagagttttgg 45940431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 4058256 - 4058170
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||| || || | |||||||||||||| ||||| |||||| ||| | | ||||||||| ||||||| || |||||||||||    
T  4058256 agggctttggggggttaacttttcttcataatacaaaaccctcctcgtttggagcaactaaaaaattgtattggatgagggttttgg 4058170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 30302023 - 30301962
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagg 221  Q
    ||||||||||| ||||||||||||||||||||| | | ||||||||| ||||||| |||||||    
T  30302023 atttttcttcaaaatataaaactctcctcattt-gagaaactaaaaaattgtattggaggagg 30301962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 33187944 - 33187828
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    |||||||||| |||||||||   ||||||||| | ||||||||||| ||||||| |||||| ||||||||   |||  |||||||||||||||||  |||    
T  33187944 tttttcttcaaaatataaaatcatcctcattt-gaggaactaaaaaattgtattggaggagagttttggg-ggtttgagagggtttatatgaattcttca 33187847  T
Q  260 aatttaatctatgttgtta 278  Q
    ||| |||| ||| ||||||    
T  33187846 aatataatatatattgtta 33187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 32650489 - 32650372
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||| ||  ||||| |||||||||| | ||||||||||| ||| ||| ||||||| |||||||   |||||||| ||| |||  ||||  | ||    
T  32650489 ttttcttcattattcaaaaccctcctcatttggaggaactaaaaaattgcattggaggaggattttggggggttttggagagttaataataattctttaa 32650390  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  32650389 atttaatttatgttgtta 32650372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 46611928 - 46611864
Alignment:
Q  158 catttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggaggg 222  Q
    |||||||||||| |||||||||| |||| |||||  |||||||||||| ||||||| || |||||    
T  46611928 catttttcttcaaaatataaaaccctccccatttgagggaactaaaaaattgtatttgatgaggg 46611864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 23466112 - 23465981
Alignment:
Q  144 ggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggt 243  Q
    |||||||| || |||||||||||| |||||| ||||| ||||||||||  ||||||| | || ||||||| |||  ||||||||||   ||||| |||||    
T  23466112 ggctttggggggttcatttttctttataatacaaaaccctcctcatttgagggaactcacaaattgtattggag--gggttttggg-ggttttgaagggt 23466016  T
Q  244 ttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||| |||  ||| ||||||| ||||| ||||    
T  23466015 ttacatggattcttcacatttaatttatgtagtta 23465981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 33113798 - 33113620
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttt----tcttcataatataaaactctcctcatttagggga 197  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| || |||||    || | |||| | ||||  | |||||||| |||||    
T  33113798 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggagg-ttaattttctactcatgataaaaaaaaatccccctcattt-gggga 33113701  T
Q  198 actaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||| ||||||| | |||||||||||| |  || ||||||||||||||||||   ||||||  ||| ||||||||||    
T  33113700 actcaaaaattgtatttggggagggttttggacggttatggagggtttatatgaatatttcaaatccaatttatgttgtta 33113620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 278
Target Start/End: Complemental strand, 12624472 - 12624355
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    |||||||||| |||| |||||||| || |||| ||||||||||||| ||| ||| ||| || |||||||    |||  |||| ||||||||||||  |||    
T  12624472 tttttcttcaaaataaaaaactcttcttattt-ggggaactaaaaatttgcattggagtagagttttggaaggtttgagaggttttatatgaattcttca 12624374  T
Q  260 aatttaatctatgttgtta 278  Q
    |||||||| ||| ||||||    
T  12624373 aatttaatatatattgtta 12624355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 14676284 - 14676330
Alignment:
Q  232 attttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  14676284 attttggagggtttacatgaattcttcaaatttaatctatgtagtta 14676330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 23087165 - 23087131
Alignment:
Q  13 aatatgacatattttggtccatgtagtcgacccca 47  Q
    |||||||| ||||||||||||||||||||||||||    
T  23087165 aatatgacgtattttggtccatgtagtcgacccca 23087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 38235835 - 38235894
Alignment:
Q  217 ggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||| |||||||||||||||||||  ||||||| ||||||| ||||||    
T  38235835 ggagggttttggg--attatggagggtttatatgaatttttcaaattcaatctatattgtta 38235894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 43188915 - 43188957
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  43188915 tggagggtttatatgaatttttcaaattcaatctatgttgtta 43188957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 17818345 - 17818386
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  17818345 ggagggtttagatgaattcttcaaatttaatctatgttgtta 17818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 30081423 - 30081468
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||| ||||||  ||||||||||| ||||||||||    
T  30081423 ttttggagggtttatgtgaattcttcaaatttaatatatgttgtta 30081468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 34670179 - 34670244
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    |||||||||||||| ||||  |||||||||| || ||  ||| || ||||||||||||||||||||    
T  34670179 ttttcttcataatacaaaatcctcctcatttgggtgacttaagaaattgtattagaggagggtttt 34670244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 35264914 - 35264873
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  35264914 ggagggtttatatgaatttttcaaatttaatttatgttgtta 35264873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 38987329 - 38987406
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctca 188  Q
    |||||||||||| ||||||||| || |   |||| |||||||   || ||||||||||| ||||||||||||||||||    
T  38987329 aagtggaagaaatagaggacattggaaataaaggtctttggaaagtttatttttcttcaaaatataaaactctcctca 38987406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 43665191 - 43665150
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||| ||||||||||||||    
T  43665191 ggagggtttatatgaatttttcaaattcaatctatgttgtta 43665150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 43741328 - 43741397
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||| ||||||||| |||||  || |||||| ||| ||||||||||||||||| |||||  |||||||    
T  43741328 attttttttcataatacaaaaccttcatcatttggggtaactaaaaagttgtattggaggaatgttttgg 43741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 4126025 - 4126061
Alignment:
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||| |||||||||||||| |||||||    
T  4126025 gtttatatgaattattcaaatttaatctacgttgtta 4126061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 10591921 - 10591885
Alignment:
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||||||||||||||||||    
T  10591921 gtttatatgaattcttcaaatttaatctatgttgtta 10591885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 274
Target Start/End: Complemental strand, 22556797 - 22556686
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaa 261  Q
    |||||||| ||||||||||||| ||||||| |||||||   ||| |||||||  |||||| |||||||  ||||  || ||||| ||||||||  | |||    
T  22556797 tttcttcaaaatataaaactcttctcattt-ggggaaccttaaaattgtattgaaggaggattttgggagatttgagaaggtttctatgaattttttaaa 22556699  T
Q  262 tttaatctatgtt 274  Q
    |||||| ||||||    
T  22556698 tttaatatatgtt 22556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 24924616 - 24924576
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgt 273  Q
    ||||||| ||||||||||||||  |||||||||||||||||    
T  24924616 ttttggatggtttatatgaattcttcaaatttaatctatgt 24924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 24924682 - 24924611
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    ||||||||||||||||||| ||||| |||||||||| | ||||||  ||| ||||||| |||||  |||||||    
T  24924682 ttcatttttcttcataatacaaaaccctcctcattt-gaggaacttgaaaattgtatttgaggaaagttttgg 24924611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 25335367 - 25335407
Alignment:
Q  238 gagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  25335367 gagggtttatatgaatttttcaaatttaatctattttgtta 25335407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 38233852 - 38233741
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    ||||||||||| | || ||||||||| ||| || ||||| || ||||||| | |||||||||||||||||||  |||| | ||||| |   |||| ||||    
T  38233852 agggctttggaaggttaatttttcttgatattacaaaacccttctcattt-gaggaactaaaaagttgtattgaaggaagcttttgagaggttttcgagg 38233754  T
Q  242 gtttatatgaatt 254  Q
     ||||||||||||    
T  38233753 atttatatgaatt 38233741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 41471493 - 41471537
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtt 277  Q
    ||||||| |||||||| |||||  |||||||||||||||||||||    
T  41471493 ttttggaaggtttatacgaattcttcaaatttaatctatgttgtt 41471537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 7915437 - 7915603
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||| ||| |||| || | |||| || |||||||||| || ||||||||||||||||||||| ||| |||||||||| |||| | |     
T  7915437 ggaaggagcaagtggaaaaaatagagaactttgggagaggagggctttggggggttcatttttcttcataatatagaaccctcctcattttgggggattc 7915536  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatc 268  Q
    |||| ||||||| |||||||||||||||   || ||||||||||| |||||||  ||||||||||||    
T  7915537 aaaaattgtattggaggagggttttgggaggttctggagggtttacatgaattcttcaaatttaatc 7915603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 5584429 - 5584605
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  5584429 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 5584528  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||||||||||||||   ||| |||||||| ||| |||||  ||||||||||| ||||||||||    
T  5584529 aaaaattgtattggaggagggttttggggtttttgggagggttaataagaattcttcaaatttaatttatgttgtta 5584605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 36269667 - 36269840
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||| | |  ||||  | |||||||||| || || | |||||||||||||| ||||| |||||||||| |||||||||    
T  36269667 ggaatgagcaagtggaagaaatagagaaaaatgggaggggagggctttggggggttaacttttcttcataatacaaaaccctcctcatttgggggaacta 36269766  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    |||| ||||||| |||||| |||| |||   ||||||||| ||||||||||||  ||||||| |||||||||||    
T  36269767 aaaaattgtattggaggagagtttcggggggttttggaggatttatatgaattcttcaaattcaatctatgttg 36269840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 36886794 - 36886969
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  | ||  | |||||||||| || || | ||||||||||||||  |||| | |||||||| |||||||||    
T  36886794 ggaatgagcaagtggaagaaatagaggaaaatgagaggggagggctttggggg-ttaacttttcttcataatactaaacccccctcattttggggaacta 36886892  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||| ||| |||||||||||| ||   ||||||||||||||||||||||  ||||||||||||||||||||||    
T  36886893 aaaaattgcattggaggagggtttttgggggttttggagggtttatatgaatttttcaaatttaatctatgttgtta 36886969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 24437032 - 24436913
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||| |||||||||| |||||  |||||| ||||||||||||||||||||||  | |||  |||| ||||||||| ||| ||    
T  24437032 atttttcttcaaaatataaaaccctcctcatttgggggagttaaaaaattgtattagaggagggttttggagagtttcagaggatttatatgatttattc 24436933  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  24436932 aaatttaatctatgttgtta 24436913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 37649764 - 37649597
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| |  || | ||||||| |||||| ||||| |||||||||| | ||||||||||| ||||    
T  37649764 aagtggaagaaatagaggaaaatgggagaggagggctttggggtgttaacttttctttataatacaaaaccctcctcatttggaggaactaaaaaattgt 37649665  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||||||||| || | |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  37649664 attggaggagggtttttgggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 37649597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 41817446 - 41817280
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || ||| |||||| || || | |||||||||||||| ||||| ||| |||||| | ||||||||||| ||||    
T  41817446 aagtggaagaaatagaggaaaatgggagaggaggactttggggg-ttaacttttcttcataatacaaaaccctcatcatttggaggaactaaaaaattgt 41817348  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||||||||||| | |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  41817347 attggaggagggttttggggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 41817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 46001500 - 46001666
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||| |||||||| || | |||||||||||||||||||| |||||||||| | ||||||||||| ||||    
T  46001500 aagtggaagaaatagaggaaaatgggagaggagggttttggagg-ttaacttttcttcataatataaaaccctcctcatttggaggaactaaaaaattgt 46001598  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||| ||||||||   ||||| |||||| ||| |||||  ||||||||||| ||||||||||    
T  46001599 atttgaggagagttttggggggttttgtagggttaataagaattcttcaaatttaatttatgttgtta 46001666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 49103105 - 49102986
Alignment:
Q  105 aggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaa 204  Q
    ||||| |||||||||||| ||||||||| ||||  || |||||||||||| || ||||||||||| || ||||||| |||||||||| ||||||||||||    
T  49103105 aggagtaagtggaagaaatagaggacattgggag-gaggggctttggagggtttatttttcttcaaaacataaaaccctcctcatttgggggaactaaaa 49103007  T
Q  205 agttgtattagaggagggttt 225  Q
    | ||||||| |||||||||||    
T  49103006 aattgtattggaggagggttt 49102986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 2909101 - 2909218
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| || ||||||| | ||||||||||| ||||||| |||||||||||||||   |||||||||||| ||| |||||  ||||    
T  2909101 ttttcttcataatagaaaaccctactcatttggaggaactaaaaaattgtattggaggagggttttggggggttttggagggttaataagaattcttcaa 2909200  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  2909201 atttaatttatgttgtta 2909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 41432880 - 41432743
Alignment:
Q  144 ggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaatt----ttgga 239  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||| |||| ||| |||| ||||||| |||||||||||||||   ||    |||||    
T  41432880 ggctttgggggtttcatttttcttcataatataaaaccctcctcattt-gggggactcaaaatttgtattggaggagggttttggggggttttggttgga 41432782  T
Q  240 gggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||||  ||||||||||||||||| ||||    
T  41432781 gggtttacatgaattcttcaaatttaatctatgtagtta 41432743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 17556592 - 17556718
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||||||||| ||||  ||  |||||||| ||  | ||||||||||| |||||||||| |||||||||| |||||||||    
T  17556592 ggaaggagtaagtggaagaaatagaggacattgggag-gagaggctttggggggcttatttttcttcaaaatataaaaccctcctcatttgggggaacta 17556690  T
Q  202 aaaagttgtattagaggagggttttggg 229  Q
    |||| || |||| |||||||||||||||    
T  17556691 aaaaattctattggaggagggttttggg 17556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 29092020 - 29092186
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  29092020 aagtggaagaaatagaggaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 29092118  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||||| ||||||||   |||||||||||| ||| |||||  | ||||||||| ||| ||||||    
T  29092119 attggaggagagttttggggggttttggagggttaataagaattctttaaatttaatttatattgtta 29092186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 52073604 - 52073479
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| | ||  | | |||||||| || ||||||||||||||||||  ||||| |||||||||| ||||||||     
T  52073604 ggaaggagcaagtggaagaaatagatgacattgagaggggaaggctttgg-ggtttcatttttcttcataattcaaaaccctcctcatttgggggaactc 52073506  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    |||| ||||| ||||||||||||||||    
T  52073505 aaaaattgtactagaggagggttttgg 52073479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 27499908 - 27500084
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  27499908 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 27500007  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||  | |||||||||||||   || |||||| ||||||||||||  ||||||| ||||||||||||||    
T  27500008 aaaaattgtatcgggggagggttttggggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 27500084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 47905846 - 47905670
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||||||||||| ||| ||||| ||||    |||| |||||||| |   |||||  |||||||| |||| || |||||||| ||||||||     
T  47905846 ggaaggagtaagtggaagaaatagaagacattgggaggagagggttttggaggttagttttttactcataataaaaaattcccctcatttgggggaactc 47905747  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  47905746 aaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 47905670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 33854938 - 33854820
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| ||||| ||| ||| || ||| |||||||||||||  || ||| |||||||| ||  ||||||||| |||||||||||||  ||    
T  33854938 atttttcttcataatacaaaaccctcttcaatt-gggaaactaaaaagttgatttggagaagggtttttggtgattttggagcgtttatatgaatttttc 33854840  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  33854839 aaatttaatctatgttgtta 33854820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 33925984 - 33926102
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||| ||||| ||| ||| || ||| |||||||||||||  || ||| |||||||| ||  ||||||||| |||||||||||||  ||    
T  33925984 atttttcttcataatacaaaaccctcttcaatt-gggaaactaaaaagttgatttggagaagggtttttggtgattttggagcgtttatatgaatttttc 33926082  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  33926083 aaatttaatctatgttgtta 33926102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 103 - 278
Target Start/End: Original strand, 33991466 - 33991641
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    |||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| |||||||| |    
T  33991466 gaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactca 33991565  T
Q  203 aaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||| | |||||||||||||   || |||||||||||||||||||  | ||||  ||||||||||||||    
T  33991566 aaaattgtattgggggagggttttggggggttatggagggtttatatgaattttttaaatcaaatctatgttgtta 33991641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 28848944 - 28848820
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaa 202  Q
    ||||||| |||||||||||| ||| | ||| | ||| | | |||||||| || ||||||||||||||||| | ||||| |||||||||| |||||||| |    
T  28848944 gaaggagaaagtggaagaaatagatggcattgagacgggaaggctttgg-ggtttcatttttcttcataacacaaaaccctcctcatttgggggaactca 28848846  T
Q  203 aaagttgtattagaggagggttttgg 228  Q
    ||| ||||||| ||||||||||||||    
T  28848845 aaaattgtattggaggagggttttgg 28848820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 13255268 - 13255444
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  13255268 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 13255367  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||| | |  ||||||||||||   || | |||||||||||||||||  ||||||| ||||||||||||||    
T  13255368 aaaaattgtagtgggagagggttttggggggttatagagggtttatatgaatttttcaaattcaatctatgttgtta 13255444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 17760626 - 17760506
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    ||||||||||||||| |||||| |  |||| || || ||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| |    
T  17760626 agcaagtggaagaaatagaggaaaatgggagaggagagctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaat 17760527  T
Q  208 tgtattagaggagggttttgg 228  Q
    |||||| |||| |||||||||    
T  17760526 tgtattggaggggggttttgg 17760506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 141 - 277
Target Start/End: Original strand, 34738280 - 34738415
Alignment:
Q  141 aagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggag 240  Q
    ||||| |||||||| ||||||||||||||||||| ||||  ||| ||||||| ||||||| | |||||  ||| ||||||| |||| || |  |||||||    
T  34738280 aagggttttggagg-ttcatttttcttcataatacaaaatcctcttcatttaagggaactcataagtttgattggaggaggattttagggagctttggag 34738378  T
Q  241 ggtttatatgaattaatcaaatttaatctatgttgtt 277  Q
    | ||||||||||||  | |||||||||||||||||||    
T  34738379 gatttatatgaattctttaaatttaatctatgttgtt 34738415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 52068235 - 52068167
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  52068235 ttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttggg 52068167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 12625923 - 12625809
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| ||||||||| ||||||||||| || |||||||||| ||||||| |||||| ||||||||   ||| | | ||||||||||||||| ||    
T  12625923 atttttcttcaaaatataaaaatctcctcattt-ggagaactaaaaacttgtattggaggagagttttggggggtttggaaaggtttatatgaattattc 12625825  T
Q  259 aaatttaatctatgtt 274  Q
     |||||||| ||||||    
T  12625824 gaatttaatgtatgtt 12625809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 275
Target Start/End: Complemental strand, 1688373 - 1688201
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  1688373 ggaaggagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcattt-ggggaactc 1688275  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    |||| ||||||| | |||| ||||||||   || |||||||||||||||||||  ||||||| ||| |||||||    
T  1688274 aaaaattgtattgggggagagttttggggggttatggagggtttatatgaatttttcaaattcaatttatgttg 1688201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 23871620 - 23871444
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    ||||||||||||||||||||| ||| ||||| | ||    ||||||||||| | |   |||||  |||||||| |||| ||||| |||||| ||||||||    
T  23871620 ggaaggagcaagtggaagaaatagaagacattgagaggagagggctttggaagttaattttttactcataataaaaaa-tctccctcatttgggggaact 23871522  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   ||  ||||||||||||||||||  ||||||| ||||||||||||||    
T  23871521 caaaaattgtattggcggagggttttggggggttacggagggtttatatgaatttttcaaattcaatctatgttgtta 23871444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 39889815 - 39889639
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    |||||||| |||||||| ||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| |||| ||||| | |||| ||||||||    
T  39889815 ggaaggagtaagtggaaaaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaa-tctccctaatttgggggaact 39889717  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  39889716 caaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 39889639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 278
Target Start/End: Complemental strand, 43036459 - 43036304
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||| |||| ||||  || ||||||||| || || ||||||||||| |||||||||| |||||||||| || |||||||||| ||||    
T  43036459 aagtggaagaaatagagtacattgggag-gaggggctttggggggttaatttttcttca-aatataaaaccctcctcatttgggagaactaaaaaattgt 43036362  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||  ||||| ||          ||||||||||||||||  ||||||||||||||||||||||    
T  43036361 attggagggaggtttggg----------agggtttatatgaattcttcaaatttaatctatgttgtta 43036304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 33324558 - 33324723
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    |||| |||||||| ||||||| |||||| |  |||| ||| |||||||||| || || | ||||||||||||||  |||| ||||||||||  |||||||    
T  33324558 ggaatgagcaagtagaagaaatagaggaaaatggga-agagagggctttggggggttaacttttcttcataatactaaaccctcctcatttgagggaact 33324656  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||| ||||||||||||||||          |||| |||||||||||||||||  |||||||||||| |||||||||    
T  33324657 aaaaa-ttgtattagaggaggg----------ttttagagggtttatatgaattcttcaaatttaatcaatgttgtta 33324723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 25561414 - 25561303
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||| ||||||||||  || |||||| ||||||||||||| || |||| |||||||||||||||   ||| |||| |||||||||||||  ||||    
T  25561414 ttttcttcaaaatataaaaccatcgtcattt-ggggaactaaaaaattatattggaggagggttttggg-ggtttgggagagtttatatgaattcttcaa 25561317  T
Q  261 atttaatctatgtt 274  Q
    ||||||| ||||||    
T  25561316 atttaatatatgtt 25561303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 273
Target Start/End: Original strand, 33643611 - 33643728
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||||||||||||||| || | |||||| |||| | ||| || ||||||| |||| | ||||||||||||| | |||| ||||||||| || ||||     
T  33643611 ttcatttttcttcataatacaatattctccttatttggaggatctcaaaagttatattggcggagggttttgggaagttttagagggtttacataaattc 33643710  T
Q  256 atcaaatttaatctatgt 273  Q
     ||||||||||| |||||    
T  33643711 ttcaaatttaatttatgt 33643728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 275
Target Start/End: Original strand, 37955104 - 37955275
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    ||||||||| |||||| | |||||| |||||  | |||| |||||||  || |||||||||||||||| |||| |||||| ||||    ||| |||||      
T  37955104 gagcaagtgaaagaaatataggacaacgggaggggagggttttggagtgttaatttttcttcataatacaaaattctccttatttgaaagaaataaaaca 37955203  T
Q  207 ttgtattagaggagg---gttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||||| ||||| |   |||||||| ||||||||||| ||||||||||||  | |||||||||| ||||||    
T  37955204 ttgtattcgaggaagaaggttttgggaaattttggaggatttatatgaattctttaaatttaatcgatgttg 37955275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 42333626 - 42333694
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||| |||||| |||||||    
T  42333626 atttttcttcataatacaaaaccctcctcattta-gggaactaaagagttgtattggaggagagttttgg 42333694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 50586972 - 50587060
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcattt 191  Q
    ||||||||||||||||||||| ||||||||| | ||  || ||||||||| || ||||||||||||||||||| ||||  ||||||||||    
T  50586972 ggaaggagcaagtggaagaaatagaggacattgagaggga-gggctttggggggttcatttttcttcataatacaaaatcctcctcattt 50587060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 896568 - 896476
Alignment:
Q  186 tcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| |||||||| |||| |||||||   |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  896568 tcatttgggggaactcaaaaattgtattgtgggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 42162210 - 42162034
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| || |    |||| |||||||| |   |||||  |||||||| ||||  | |||||||| || |||||     
T  42162210 ggaaggagcaagtggaagaaatagatgacattggaaggagagggttttggaggttaattttttactcataataaaaaatccccctcatttgggagaactc 42162111  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||  |||| || ||||||| |||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  42162110 aaatattgtgttggaggaggattttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 42162034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 47742456 - 47742580
Alignment:
Q  103 gaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatata-aaactctcctcatttaggggaacta 201  Q
    ||||||| |||||||||||| ||||||||| | ||  | |||||||||| || || |||||| ||| ||||| | |||| |||||||||  ||| |||||    
T  47742456 gaaggagtaagtggaagaaatagaggacattgagaagggagggctttggggggttaatttttgttcctaatacataaaccctcctcattcggggaaacta 47742555  T
Q  202 aaaagttgtattagaggagggtttt 226  Q
    |||||||||||| |||||| |||||    
T  47742556 aaaagttgtattggaggagagtttt 47742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 18937303 - 18937425
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg-ggcaattttggagggtttatatgaatt 254  Q
    ||||||||||||||| |||||||| ||||||||  || | ||||| |||| ||||||| ||||||| |||||  | ||||||||| | |||  || ||||    
T  18937303 ttcatttttcttcattatataaaattctcctcacata-gagaactcaaaaattgtattggaggaggattttgatgaaattttggaagtttttaataaatt 18937401  T
Q  255 aatcaaatttaatctatgttgtta 278  Q
     |||||||||||||||||||||||    
T  18937402 catcaaatttaatctatgttgtta 18937425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 36385275 - 36385439
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| ||||||||| | || |  |||| ||||| ||||| ||| ||||||| ||||||||||||||||||| || | |||||||| | ||||    
T  36385275 aagtggaagaaatagaggacattgagagaagagggttttgg-ggatttattcttcttca-aatataaaactctcctcatctacgagaactaaata-ttgt 36385371  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| ||||||| ||||| |  ||||   || |||||||||||||  | ||||||||| ||||||||||    
T  36385372 attggaggaggattttgagggatttgaaagagtttatatgaattctttaaatttaatttatgttgtta 36385439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 39887024 - 39886905
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttag-gggaactaaaaagttgtattagaggagg-gttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||||||  |||| |||||||||| | |||||||||||| ||||||| ||  |   ||||||||   |||||||| |||||||||||||  ||    
T  39887024 ttttcttcataatactaaaccctcctcatttggtgggaactaaaaaattgtattggaaaaaaagttttgggggtttttggagagtttatatgaattcttc 39886925  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||    
T  39886924 aaatttaatctatgttgtta 39886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 41428093 - 41427975
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    |||||||||||||||  || | ||||||||||| |||||||| |||| || |||| ||||||| |||||||  |||||||| ||||||| | ||||  ||    
T  41428093 atttttcttcataatgaaagaatctcctcattt-ggggaactcaaaaattatattggaggaggattttgggggattttggaaggtttatgtaaattcttc 41427995  T
Q  259 aaatttaatctatgttgtta 278  Q
    ||||||| ||||| ||||||    
T  41427994 aaatttattctatattgtta 41427975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 17688262 - 17688439
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttct---tcataatataaaa-ctctcctcatttagggga 197  Q
    ||||||||||||||||||||| |||  |||| ||||    ||||||||||||| || |||||| |   |||||||| |||| ||| |||||||| |||||    
T  17688262 ggaaggagcaagtggaagaaatagaaaacattgggaggagagggctttggagg-ttaattttttttactcataataaaaaatctc-cctcatttggggga 17688359  T
Q  198 actaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||| |||| ||||||| | |||| ||||||||   || |||||||||||||||||||  ||||||| ||| ||||||||||    
T  17688360 actcaaaaattgtattgggggagagttttggg-ggttatggagggtttatatgaatttttcaaattcaatatatgttgtta 17688439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 27255133 - 27255259
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||||| |  |||| || ||||||||||  | || | |||||||||||||| ||||| ||||||||||   |||||||    
T  27255133 ggaatgagcaagtggaagaaatagaggaaaatgggagaggagggctttgggaggttaacttttcttcataatacaaaaccctcctcatttgaaggaacta 27255232  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    ||||  |||||  | ||||||||||||    
T  27255233 aaaaaatgtatcgggggagggttttgg 27255259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 34154445 - 34154359
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||||||||| || || | |||||||||||||| |||||  ||||||||| | ||||||||||| ||||||| |||| |||||||||    
T  34154445 agggctttggggggttaacttttcttcataatacaaaaccttcctcatttggaggaactaaaaaattgtattggaggggggttttgg 34154359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 38794894 - 38795071
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||| ||| ||| || || ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  38794894 ggaaggagcaagtggaaaaaatagaagatattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactt 38794993  T
Q  202 aaaagttgtattagaggagggttttggg-caattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     ||| || |||| | |||||||||||||    ||||||||||||||||||||||  |||| || ||||||||||||||    
T  38794994 caaaattttattgggggagggttttgggaggtttttggagggtttatatgaatttttcaatttcaatctatgttgtta 38795071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 39508777 - 39508870
Alignment:
Q  185 ctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| |||||| |||||| ||||||| | |||||||||| ||   |||||||| |||||||||||||  ||||||| ||||||| ||||||    
T  39508777 ctcatttgggggaattaaaaaattgtattgggggagggttttagggggttttggagagtttatatgaatttttcaaattcaatctattttgtta 39508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 2926091 - 2925916
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||| ||| ||| ||||| ||||    ||||||||||||| |   |||||  | |||||| ||||  | |||||||| ||||||||     
T  2926091 ggaaggagcaagtggaaaaaatagaagacattgggaggagagggctttggaggttaattttttacttataataaaaaatccccctcatttgggggaactc 2925992  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | | |  ||||| ||   || |||||||||||||||||||  ||||||||||||||||||||||    
T  2925991 aaaaattgtattggggaaatgttttagggg-ttatggagggtttatatgaatttttcaaatttaatctatgttgtta 2925916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 263
Target Start/End: Original strand, 11017523 - 11017682
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcat-ttttcttcataatataaaactctc-ctcatttaggggaac 199  Q
    ||||||||||||||||||||| | | ||||| | || | |||||||||||||| || || ||||  |||||||| |||| || | ||||||| |||||||    
T  11017523 ggaaggagcaagtggaagaaatatatgacattgagagaaaagggctttggagg-ttaatattttactcataata-aaaattccctctcattttggggaac 11017620  T
Q  200 taaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatt 263  Q
    | |||| ||||||||| |||||||||||||   || || ||||||||||||||||  |||||||    
T  11017621 tcaaaaattgtattaggggagggttttggg--gttatgaagggtttatatgaatttttcaaatt 11017682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 33579219 - 33579282
Alignment:
Q  162 tttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    |||||| |||||| ||||| |||||||||| |||||||| |||||||||||| ||||||||||||    
T  33579219 tttctttataatacaaaaccctcctcattt-ggggaactcaaaagttgtattggaggagggtttt 33579282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 47206515 - 47206405
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||| ||||  | |||||||| |||||||| |||| ||||||| | ||| | |||||||   || |||||||||||||||||||  ||||||| ||    
T  47206515 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggaagattttggggg-ttatggagggtttatatgaatttttcaaattcaa 47206417  T
Q  267 tctatgttgtta 278  Q
    ||||||||||||    
T  47206416 tctatgttgtta 47206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 4204876 - 4204763
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| || ||||||| ||||||||||||| ||| |||  || || ||||| ||   |||||||||||||||||||||   ||||    
T  4204876 ttttcttcataatacaaaac-ctactcatttgggggaactaaaaaattgcattgaagcagagtttttgggggttttggagggtttatatgaatgcttcaa 4204778  T
Q  261 atttaatctatgttg 275  Q
    |||| ||| ||||||    
T  4204777 attttatcaatgttg 4204763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 7963980 - 7964074
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| | |||||| |||| ||||||| | |||||||||||||   || || || |||||||||||||  ||||||| ||||||||||||||    
T  7963980 cctcatttggaggaactcaaaaattgtattgggggagggttttggggggttatgaagcgtttatatgaatttttcaaattcaatctatgttgtta 7964074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 14153118 - 14153211
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||| |||| |||| ||||||| | | ||||||||||  | || |||||||||||||| ||||  ||||||| ||||||||||||||    
T  14153118 cctcatttaggg-aactcaaaaattgtattggggtagggttttggagagttatggagggtttatattaatttttcaaattcaatctatgttgtta 14153211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 42488702 - 42488608
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||  | ||||||||||| |   || | |||||||||||||||||  ||||||| ||||||||||||||    
T  42488702 cctcatttgggggaactcaaaaattgtatcgggggagggttttgtggggttattgagggtttatatgaatttttcaaattcaatctatgttgtta 42488608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 50247559 - 50247689
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattt-tggag 240  Q
    ||||||||||||| |   |||||  |||||||| ||||  ||||||||||| ||||||| |||  ||||||| | ||||||||| |||  | || |||||    
T  50247559 agggctttggaggttaattttttactcataataaaaaatcctcctcatttatgggaactcaaagattgtattgggggagggtttcgggggagttatggag 50247658  T
Q  241 ggtttatatgaattaatcaaatttaatctat 271  Q
    ||||||||||||||  ||||||| |||||||    
T  50247659 ggtttatatgaatttttcaaattcaatctat 50247689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 51303275 - 51303181
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||| |||||| ||||||  |||||||||| | |||||| |||| ||| ||| ||||||||||||| |   ||||||||| ||||||||||||    
T  51303275 tttttcatcataacataaaatcctcctcatttggtggaactcaaaaattgcatttgaggagggttttgaggggttttggaggatttatatgaatt 51303181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 10618779 - 10618855
Alignment:
Q  143 gggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggag 220  Q
    ||||||||| |||||  |||||||||| |||||||||||||||||||  | |||||||||||| ||||| | ||||||    
T  10618779 gggctttgggggatttgtttttcttcaaaatataaaactctcctcatgga-gggaactaaaaaattgtaatggaggag 10618855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 5970587 - 5970464
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| |||| ||||||| |||| ||||  |||  | |||||||||| || || |||||||||||||||||| ||| ||| |  ||| | |||||||    
T  5970587 ggaaggagtaagttgaagaaatagagtacattaggaggggagggctttggggg-ttaatttttcttcataatatagaaccctcattgtttggtggaacta 5970489  T
Q  202 aaaagttgtattagaggagggtttt 226  Q
    |||||||||||| || ||| |||||    
T  5970488 aaaagttgtattggatgagagtttt 5970464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 35619604 - 35619536
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||| |||||||||||||  |||| |  |||||||||||| ||||||| || ||||||||||    
T  35619604 atttttcttcaaaatataaaactctaatcatctgagggaactaaaaaattgtattggatgagggttttg 35619536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 38795447 - 38795387
Alignment:
Q  218 gagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||   ||||||| ||||||||||||||  ||||||||||||| ||||||||    
T  38795447 gagggttttggggggttttggaaggtttatatgaattcttcaaatttaatctgtgttgtta 38795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 40243354 - 40243410
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagag 217  Q
    |||||||||||||| ||||| || ||||||| || ||||||||||||| ||||||||    
T  40243354 ttttcttcataatacaaaacccttctcattttggagaactaaaaagttatattagag 40243410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 51246718 - 51246595
Alignment:
Q  104 aaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctc-ctcatttaggggaactaa 202  Q
    |||||||||||| |||||| ||| ||||| ||||   ||||||||| |||| |   |||||  |||||||| |||| |||| ||||||| |||||||| |    
T  51246718 aaggagcaagtgaaagaaatagaagacattgggaggaaagggctttagaggttaattttttactcataataaaaaa-tctctctcatttgggggaactca 51246620  T
Q  203 aaagttgtattagaggagggttttg 227  Q
    ||| ||||||| |||||||||||||    
T  51246619 aaaattgtattggaggagggttttg 51246595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 8156413 - 8156318
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattt-tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||| | |||| ||||||||    || |||||||||||||| ||||  ||||||| ||||||||||||||    
T  8156413 cctcatttgggggaacttaaaaattgtattgggggagagttttgggggggttatggagggtttatatcaatttttcaaattcaatctatgttgtta 8156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 280
Target Start/End: Original strand, 36325774 - 36325817
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgttaaa 280  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||    
T  36325774 ggagggtttatatgaattcttcaaattcaatctatgttgttaaa 36325817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 278
Target Start/End: Original strand, 50084118 - 50084224
Alignment:
Q  171 aatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatcta 270  Q
    |||||||||| ||| |||||| ||||||||||||| |||||||  || || |||||||| |||||  |||| ||||||| ||||  | ||||||||| ||    
T  50084118 aatataaaaccctcgtcattt-ggggaactaaaaaattgtattttagtagagttttggggaatttgagaggatttatatcaattctttaaatttaatata 50084216  T
Q  271 tgttgtta 278  Q
    | ||||||    
T  50084217 tattgtta 50084224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 1278451 - 1278549
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||||||||||| |||| ||||  | ||||||||  |||  || ||||   ||||| |||||||||||||||   ||||||||||||||||||||||    
T  1278451 ttcatttttcttcaaaatacaaaatccgcctcatttgagggctctcaaaaaccgtattggaggagggttttggggggttttggagggtttatatgaatt 1278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 12293774 - 12293912
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattt-tggag 240  Q
    |||||| |||||| |  ||||||  |||||||| ||||  | |||||||| |||||||| |||| ||||||| | |||||||||||||    || |||||    
T  12293774 agggctatggaggttaaatttttactcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttgggggggttatggag 12293873  T
Q  241 ggtttatatgaa-ttaatcaaatttaatctatgttgtta 278  Q
    |||||||||||| ||  ||||||| ||| ||||||||||    
T  12293874 ggtttatatgaattttttcaaattcaatatatgttgtta 12293912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 13061471 - 13061378
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||| || |||| ||||||| | |||||||||| ||   || |||| ||||| ||||||||  ||||||| ||||||||||||||    
T  13061471 cctcatttaggggatctcaaaaattgtattgggggagggtttttgggg-ttatggatggtttgtatgaatttttcaaattcaatctatgttgtta 13061378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 32299160 - 32299202
Alignment:
Q  236 tggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  32299160 tggagggtttatatgaatttttcaaattcaatctatgttgtta 32299202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 50226023 - 50226130
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||| |||| || ||||||| |  |||||||||| ||||||| |||||| |          |||| |||||||||||||||||  || |    
T  50226023 ttttcttcataatattaaacccttctcatttggaagaactaaaaaattgtattggaggagcg----------tttttgagggtttatatgaattcttcta 50226112  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  50226113 atttaatctatgttgtta 50226130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 50587095 - 50587136
Alignment:
Q  239 agggtttatatgaattaatcaaatttaatctatgttgttaaa 280  Q
    ||||||||||||||||  |||||||||| |||||||||||||    
T  50587095 agggtttatatgaattcttcaaatttaaactatgttgttaaa 50587136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 69717 - 69824
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||  |||| |||||| ||| | ||||||||||| |||||||   |||  |||||||   |||||| ||||||||||||||||   |||    
T  69717 ttttcttcataatactaaaccctcctcgttt-gaggaactaaaaaattgtattgatggaaagttttggaggattttgaagggtttatatgaattctccaa 69815  T
Q  261 atttaatct 269  Q
    |||||||||    
T  69816 atttaatct 69824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 6015491 - 6015531
Alignment:
Q  238 gagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  6015491 gagggtttatatgaattcttcaaatttaatatatgttgtta 6015531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 23412056 - 23412000
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtat 212  Q
    ||||||||||||||||||  ||||  |||||||||| | ||||||||||| ||||||    
T  23412056 ttcatttttcttcataattcaaaatcctcctcatttggaggaactaaaaaattgtat 23412000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 26757312 - 26757140
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||| ||||||||| ||| || || ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||| ||||     
T  26757312 ggaaggagcaaatggaagaaatagaagatattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttggggtaactc 26757213  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||| ||||||| | ||||| |||||||   || |||||||||||||  || |  ||||||| ||||||||||    
T  26757212 aaaaattgtattgggggaggtttttggggggttatggagggtttatactaagttttcaaattcaatctatgtt 26757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 32287597 - 32287677
Alignment:
Q  195 ggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||||||||| ||||||| || |||||||||| |   |||||||| |||||||| | ||  ||||||||||| |||||||    
T  32287597 ggaactaaaaaattgtattggatgagggttttgaggggttttggagagtttatatcatttcttcaaatttaatatatgttg 32287677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 34750105 - 34750037
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||  ||||||||||||| |||| |||| |||||||| |||| ||||||| | ||||| |||||    
T  34750105 atttttctctataatataaaactatccttatttgggggaactcaaaaattgtattggtggaggattttg 34750037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 43529971 - 43530022
Alignment:
Q  177 aaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||| | |||||||| || |||||||||||||||||||||||| |||||    
T  43529971 aaactctctttatttaggg-aattaaaaagttgtattagaggagggtgttggg 43530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 50097609 - 50097676
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    ||||||||||| ||||||||||  |||| |||| | ||||||||||||||||||| || |||| |||||    
T  50097609 atttttcttcaaaatataaaaccatccttattt-gaggaactaaaaagttgtattggatgaggtttttg 50097676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 278
Target Start/End: Complemental strand, 346 - 177
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    ||||||||||||||| |||||| |  |||| || || ||||||| || || | |||||||||||||| ||||| ||||| |||| | ||||||||||| |    
T  346 agcaagtggaagaaatagaggaaaatgggagaggagagctttggggg-ttaacttttcttcataatacaaaaccctccttatttggaggaactaaaaaat 248  T
Q  208 tgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| ||||||||||||| |   |||||||||||| ||| |||||  ||||||||||||||||||||||    
T  247 tgtattggaggagggttttgcggggttttggagggttaataagaattcttcaaatttaatctatgttgtta 177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 2179 - 2004
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||     
T  2179 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactg 2081  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| ||||| || |||||| | |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  2080 aaaaattgtattggaggaaggatttggggagttttggagggttaataagaattcttcaaatttaatttatgttgtta 2004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 278
Target Start/End: Original strand, 26312 - 26480
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| ||  | | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  26312 aagtggaagaaatagaggaaaatgggagaggagggctttggggggataacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 26411  T
Q  211 a-ttagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    | || |||||||||||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  26412 atttggaggagggttttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 26480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 29169 - 29344
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| |||||||||||| ||| || | |||||||||||||| ||||| ||| |||||| | |||||||    
T  29169 ggaatgagcaagtggaagaaatagaagaaaatgggagagaagggctttg-agggttaacttttcttcataatacaaaaccctcatcatttggaggaacta 29267  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| ||||| || ||||||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  29268 aaaaattgtattggaggaaggatttggggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 29344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 1029217 - 1029393
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| || |    |||||||||||||||   |||||  |||||||| |||| |   ||||||| |||||| ||    
T  1029217 ggaaggagcaagtggaagaaatagaagacattggaaggagagggctttggaggataattttttactcataataaaaaatttctctcatttgggggaagta 1029316  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||||| |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  1029317 aaaaattgtattaggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 1029393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 32221986 - 32222099
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||| ||||||| ||||||||||||||| | ||||||||||| ||||||| |||||| ||||| ||  |||||||||||||||||||||||  ||||    
T  32221986 ttttctttataatatcaaactctcctcatttggaggaactaaaaaattgtattggaggagagttttagg-gattttggagggtttatatgaattcttcaa 32222084  T
Q  261 atttaatctatgttg 275  Q
    |||||| ||||||||    
T  32222085 atttaaactatgttg 32222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 1567205 - 1567381
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || || ||||||| || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  1567205 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagagctttggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 1567304  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| || ||||| ||| ||   |||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  1567305 aaaaattgtattggatgagggattttgggggttttggagggttaataagaattcttcaaatttaatttatgttgtta 1567381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 4910072 - 4909896
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctc-ctcatttaggggaact 200  Q
    ||||||||||||||||||||||||| ||||| ||||  | || |||||||||| |   |||||  |||||||| |||| |||| ||||||| | ||||||    
T  4910072 ggaaggagcaagtggaagaaacagaagacattgggaggggagagctttggaggttaattttttactcataataaaaaa-tctctctcatttggaggaact 4909974  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || |||||||||||||| ||||  ||||||| ||||||||||||||    
T  4909973 taaaaattgtattgggggagggttttggggggttgtggagggtttatatcaatttttcaaattcaatctatgttgtta 4909896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 12779497 - 12779613
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||| || || ||||| || || |||| ||||||||||||||||||||| |||||||||||| ||  ||||||||||||| ||| |||||  ||||    
T  12779497 ttttcttcgtactacaaaacccttcttatttgggggaactaaaaagttgtattggaggagggtttt-ggagattttggagggttaataagaattcttcaa 12779595  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  12779596 atttaatctatgttgtta 12779613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 33590425 - 33590314
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| |||||||||| ||||| ||||||| ||||||| || ||||||||||||   |||||||||||| |||||||||  ||||    
T  33590425 ttttcttcataatacaaaaccctcctcattt-ggggagctaaaaaattgtattggatgagggttttggggg-ttttggagggttaatatgaattcttcaa 33590328  T
Q  261 atttaatctatgtt 274  Q
    ||||||||||||||    
T  33590327 atttaatctatgtt 33590314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 32719523 - 32719407
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  32719523 aagtggaagaaatagaggaaaatgggaaaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 32719425  T
Q  211 attagaggagggttttgg 228  Q
    ||| ||||||||||||||    
T  32719424 attggaggagggttttgg 32719407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 26713787 - 26713953
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataat-ataaaactctcctcatttaggggaact 200  Q
    ||||||||||||||||||||| |||| |||| ||||  | |||||||||  || || |||||||||||| || | ||||  |||||||||| ||||||||    
T  26713787 ggaaggagcaagtggaagaaatagagtacattgggaggggagggctttgaggggttaatttttcttcatgataagaaaatcctcctcattt-ggggaact 26713885  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| ||||||||          ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  26713886 caaaaattgtattggaggaggg----------ttttggagggtttatatgaattcttcaaatttattctatgttgtta 26713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 24734806 - 24734980
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  24734806 ggaacgagcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 24734905  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||  ||||||| | |||||||||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  24734906 aaa--ttgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 24734980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 26481284 - 26481112
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcc-tcatttaggggaact 200  Q
    ||||| ||||||||||||||| ||| ||||| ||     |||||||||||||| |   |||||  |||||||| |||| || || |||||||||||| ||    
T  26481284 ggaagtagcaagtggaagaaatagaagacattgg-----aagggctttggaggttaattttttactcataataaaaaaatccccctcatttaggggagct 26481190  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | ||||| ||||||| | || |||||||||||||||||||  ||||||| |||||| |||||||    
T  26481189 caaaaattgtattgggggaggattttgggaagttatggagggtttatatgaatttttcaaattcaatctacgttgtta 26481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 23095245 - 23095109
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||||||| ||||||  | |||||||||||||   || |||||     
T  23095245 agggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactaaaaaattgtatggggggagggttttggggggttatggaga 23095146  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||| ||||||||||||||    
T  23095145 gtttatatgaatttttcaaattcaatctatgttgtta 23095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 29241990 - 29241818
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||| ||||||||| ||| ||||| ||||    |||||||||||||||   |||||  |||||||| ||||  | |||||||| ||| ||||     
T  29241990 ggaaggagcaaatggaagaaatagaagacattgggaggagagggctttggaggataattttttactcataataaaaaatccccctcatttggggtaactc 29241891  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||| ||||||| | |||||||||| ||   || ||||||||||||| |||||  ||||||| ||||||||||    
T  29241890 aaaaattgtattgggggagggttttagggggttatggagggtttatacgaatttttcaaattcaatctatgtt 29241818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 26574487 - 26574376
Alignment:
Q  167 tcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||| ||||  | |||||||| |||||||| |||| ||||||| | |||||||||||||   || |||| ||||||||||||||  ||||||| ||    
T  26574487 tcataataaaaaatccccctcatttgggggaactcaaaaattgtattgggggagggttttggggggttatggatggtttatatgaatttttcaaattcaa 26574388  T
Q  267 tctatgttgtta 278  Q
    ||||||||||||    
T  26574387 tctatgttgtta 26574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 5825339 - 5825432
Alignment:
Q  184 cctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||||||| |||| ||||||| | |||||||||||||  ||| |||||||||||||||||||  | ||||| ||||||||||||||    
T  5825339 cctcattt-ggggaactcaaaatttgtattgggggagggttttgggggattatggagggtttatatgaatttttgaaattcaatctatgttgtta 5825432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 15615646 - 15615763
Alignment:
Q  157 tcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaa 256  Q
    ||||||||||||| |||| |||| |||| ||| || ||  |||| |||| ||||||| ||| ||||||||  |  |||||||||||||||||||||||      
T  15615646 tcatttttcttcacaatacaaaaatctcatcacttgggaaaactcaaaaattgtattggagaagggttttaagggattttggagggtttatatgaattct 15615745  T
Q  257 tcaaatttaatctatgtt 274  Q
    ||||||||||||| ||||    
T  15615746 tcaaatttaatctttgtt 15615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 24875031 - 24874920
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||||||||||  |||| | |||||||| ||||||||||||  ||||||| |||||||||||||||   ||||||||||||||||| ||||  | ||    
T  24875031 ttttcttcataatactaaaccc-cctcattt-ggggaactaaaacattgtattggaggagggttttgggaggttttggagggtttatataaattctttaa 24874934  T
Q  261 atttaatctatgtt 274  Q
    ||||||| ||||||    
T  24874933 atttaatatatgtt 24874920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 280
Target Start/End: Complemental strand, 27793720 - 27793586
Alignment:
Q  145 gctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtt 244  Q
    |||||||||| || ||||||||||| |||||||||| |||| | |||| || ||||||||  ||| |||  ||||| |||||||| | ||| ||| ||||    
T  27793720 gctttggagggtttatttttcttcaaaatataaaaccctccccgttta-ggaaactaaaatattggattgaaggagagttttggggagtttgggaaggtt 27793622  T
Q  245 tatatgaattaatcaaatttaatctatgttgttaaa 280  Q
    | ||||||||  |||||| ||| |||||||||||||    
T  27793621 tgtatgaatttttcaaatataacctatgttgttaaa 27793586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 4089496 - 4089380
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| ||||||||||||||||||||| | |||||||| || ||||||| ||| ||| |||||||   ||| | || ||||||| || ||  ||    
T  4089496 atttttcttcaaaatataaaactctcctcattt-gaggaactaagaaattgtattggagaaggattttgggggctttggaagagtttatacgatttcttc 4089398  T
Q  259 aaatttaatctatgttgt 276  Q
    ||||||||| ||||||||    
T  4089397 aaatttaatatatgttgt 4089380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 22788615 - 22788501
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    ||||||| |||||| |||||||| ||||||| | ||||||||||| ||||||| ||||||||||||  |   ||||||||||||||| ||||||| || |    
T  22788615 ttttcttgataatacaaaactcttctcattt-gaggaactaaaaaattgtattggaggagggtttt-agaggttttggagggtttatgtgaattattc-a 22788519  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| | ||||||||    
T  22788518 atttaatgtgtgttgtta 22788501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 31345436 - 31345352
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| |||||||   ||||||||||||| | || ||||| |||||||||||||  ||||||||||||||||||||||    
T  31345436 ggggaactcaaaaattgtattgagggagggttttgggga-ttatggagagtttatatgaatttttcaaatttaatctatgttgtta 31345352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 2502467 - 2502347
Alignment:
Q  159 atttttcttcataatataaaactctcctcattt-aggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaat 257  Q
    ||||||||| |||||||||||||||| ||||||  || |||||||||| ||||||| || |||| ||||| |   |||  || ||||||||||||||  |    
T  2502467 atttttctttataatataaaactctcttcatttgtggagaactaaaaaattgtattggatgaggattttgtggggtttgagacggtttatatgaattctt 2502368  T
Q  258 caaatttaatctatgttgtta 278  Q
    |||||||||| ||| ||||||    
T  2502367 caaatttaatatatattgtta 2502347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 20820647 - 20820563
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    |||||||||| || || | ||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||| || ||| |||||    
T  20820647 agggctttggggggttaacttttcttcataatactaaactctcctcgtttgggggaactaaaaaattgtattggatgagagtttt 20820563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 4464927 - 4464992
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    ||||||||||| |||||| |||  ||||||||| ||||||||||||| ||||||| |||||||||||    
T  4464927 atttttcttcaaaatatacaaccttcctcattt-ggggaactaaaaaattgtattggaggagggttt 4464992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 11180315 - 11180190
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||| ||||||| |||||| |  |||| || |||||||||| || || | |||||| ||||||| ||||| |||||||||| | |||||||    
T  11180315 ggaatgagcaagtagaagaaatagaggaaaatggga-aggagggctttggggggttaacttttctccataatacaaaaccctcctcatttggaggaacta 11180217  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    || | ||||||| |  |||||||||||    
T  11180216 aagaattgtattggtagagggttttgg 11180190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 13380518 - 13380591
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcattt-aggggaactaaaaagttgtattagaggagggttttgg 228  Q
    ||||||||||||||||||||||||   |||||||||  |||||||| |||| ||||||| || |||||||||||    
T  13380518 ttcatttttcttcataatataaaatcatcctcatttggggggaactcaaaaattgtattggaagagggttttgg 13380591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 24379615 - 24379684
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttt 225  Q
    |||||||||||||| |||| ||||| |||||||||||| | |||| |||| |||||||  ||||||||||    
T  24379615 ttcatttttcttcaaaatacaaaaccctcctcatttagagaaactcaaaaattgtattgaaggagggttt 24379684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 28551983 - 28551919
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt 226  Q
    |||||||||||||| |||||||||||||||| | | ||||| ||| ||||||| ||||||||||||    
T  28551983 ttttcttcataatacaaaactctcctcatttggagaaactataaatttgtatt-gaggagggtttt 28551919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 33677004 - 33677113
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaa-aagttgtattagaggagggttttgggcaattttggagggtttatatgaattaat 257  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| |||||| ||| ||  |||||||| ||   |||  ||| |||||||||||||  |    
T  33677004 atttttcttcaaaatataaaactctcctcattttagggaactaaacaagttgaattggactagggtttttgggggtttgagagagtttatatgaattctt 33677103  T
Q  258 caaatttaat 267  Q
     |||||||||    
T  33677104 taaatttaat 33677113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 33212313 - 33212380
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    |||| ||||||||||| || ||||| ||||||| ||||||||||||||||||||| || || |||||||    
T  33212313 atttgtcttcataatacaacactctgctcattt-ggggaactaaaaagttgtattggatgacggttttg 33212380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 33755095 - 33755139
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||    
T  33755095 tttggggggtttatatgaattattcaaaattaatctatgttgtta 33755139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 33184194 - 33184248
Alignment:
Q  174 ataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    ||||||| |||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  33184194 ataaaaccctcctcattt-gaggaactaaaaaattgtattagaagagggttttggg 33184248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 17443967 - 17444021
Alignment:
Q  200 taaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||| |||||||||||||||||||||||  |||| |||  |||||||||||||    
T  17443967 taaaaaattgtattagaggagggttttgggagatttgggaaagtttatatgaatt 17444021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 25073346 - 25073304
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||| |||||||||| |||||||||| |||||||||    
T  25073346 atttttcttcaaaatataaaaccctcctcattttggggaacta 25073304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 19477311 - 19477356
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| | ||||||||||||  ||||||||||||||||||||||    
T  19477311 ttttggaagatttatatgaattcttcaaatttaatctatgttgtta 19477356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 25072557 - 25072516
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||||||||||||||| |||||  ||||||||||||||||||    
T  25072557 ttttggagggtttatacgaattcttcaaatttaatctatgtt 25072516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 34914666 - 34914727
Alignment:
Q  217 ggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||   || |||||||||||||||||||  ||||||| ||| ||||||||||    
T  34914666 ggagggttttgggaggttatggagggtttatatgaatttttcaaattcaatttatgttgtta 34914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 6688117 - 6688066
Alignment:
Q  177 aaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||||| |||||||| ||||||||| ||||||| |||||| ||||||||    
T  6688117 aaactctccttatttaggg-aactaaaaaattgtattggaggagagttttggg 6688066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 22817440 - 22817333
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||| |||||||||  ||||| |||| ||||||||||||| |||||||  | ||||||||| ||   |||  ||| ||||||||| |||  ||    
T  22817440 atttttcttcaaaatataaaatcctccttattttggggaactaaaaa-ttgtattgaaagagggtttttgggggtttaagagtgtttatatgtatttttc 22817342  T
Q  259 aaatttaat 267  Q
    |||||||||    
T  22817341 aaatttaat 22817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 26289607 - 26289651
Alignment:
Q  234 tttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||| ||||||||||||  ||||||||||||||||||||||    
T  26289607 tttgaaggatttatatgaattcttcaaatttaatctatgttgtta 26289651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 35683630 - 35683454
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| ||| || |  |||| || ||||||| || || || | |||||||||||||| ||||| |||||||||| | |||||||    
T  35683630 ggaatgagcaagtggaagaaatagaagaaaatgggagaggagggcttcggggggttaacttttcttcataatacaaaaccctcctcatttggaggaacta 35683531  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |||| | | ||||||  ||||||||||||| ||| |||||  ||||||||||| ||||||||||    
T  35683530 aaaaattgtattggaggtgagatttgggggattttggagggttaataagaattcttcaaatttaatttatgttgtta 35683454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 275
Target Start/End: Original strand, 39649495 - 39649668
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| | | || |  |||| || |||||||||| || || | |||||||||| ||| ||||| |||||||||| | |||||||    
T  39649495 ggaatgagcaagtggaagaaataaatgaaaatgggagaggagggctttggggggttaacttttcttcatgatacaaaaccctcctcatttggaggaacta 39649594  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    |||| ||||||| ||||||| |||||||   |||||||||||| ||| |||||  ||||| |||||||||||||    
T  39649595 aaaaattgtattggaggaggattttggggggttttggagggttaataagaatttttcaaaattaatctatgttg 39649668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 15974269 - 15974440
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    |||||||||||||||| |||| | |  ||||  ||| ||||||||||| || | ||||||||||||||  | |||||||||||||  | ||||||||||     
T  15974269 gagcaagtggaagaaatagagaaaaatgggagggaaaggctttggagggttaacttttcttcataatactatactctcctcatttgagagaactaaaaaa 15974368  T
Q  207 ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||  | |||||| ||||||||   |||||||||||||||| |||||  | ||||||||||||||||||||    
T  15974369 ttgttgtggaggagagttttgggggtttttggagggtttatacgaattctttaaatttaatctatgttgtta 15974440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 6491149 - 6491284
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || ||||||||||||||||||| ||||   ||||||||| |||||||| |||| ||||||| ||||| | |||||||   ||| |||||    
T  6491149 agggctttggggg-ttcatttttcttcataatacaaaatcttcctcatttgggggaactcaaaaattgtattggaggaagattttggggtgtttcggagg 6491247  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||||||  ||||||||||    
T  6491248 gtttatatgaattcttcaaatttaacttatgttgtta 6491284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 6373123 - 6373237
Alignment:
Q  163 ttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaat 262  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| ||||||| |||||  ||||||||   ||| ||||||||||||||||||  | ||||    
T  6373123 ttcttcaaaatataaaaccctcctcattt-ggggaactaaaaaattgtattcgaggaaagttttggggggtttgggagggtttatatgaattttttaaat 6373221  T
Q  263 ttaatctatgttgtta 278  Q
    ||||| ||||||||||    
T  6373222 ttaatatatgttgtta 6373237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 13569346 - 13569463
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| |||| | ||||||||| | ||||||| ||| || |||| ||||||||||||||| | ||||||||| || ||| |||||  ||||    
T  13569346 ttttcttcataatacaaaattttcctcatttggaggaactacaaaattatattggaggagggttttggggagttttggaggattaataagaatttttcaa 13569445  T
Q  261 atttaatctatgttgtta 278  Q
    |||||||||| |||||||    
T  13569446 atttaatctaggttgtta 13569463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 38568484 - 38568358
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || || | ||||||||||||||  |||| |||||||||| ||||||||||||| || |||| |||||||||||||||          ||    
T  38568484 agggctttggggggttaacttttcttcataatactaaaccctcctcatttgggggaactaaaaaattatattggaggagggttttggg----------gg 38568395  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||||||||||||||||||    
T  38568394 gtttatatgaattcttcaaatttaatctatgttgtta 38568358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 27480327 - 27480153
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||| ||||||||||||||| ||| ||||| ||||    ||||||||||||| || |||||| | | ||||| ||||  ||||||||||  |||||||     
T  27480327 ggaagaagcaagtggaagaaatagaagacattgggaggagagggctttggagg-ttaattttt-tacttaataaaaaatcctcctcatttgagggaactc 27480230  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | |||||||||| ||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  27480229 aaaaattgtattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 27480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 10437910 - 10438036
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| |||||||||||||||| |||| | |  ||||  | ||| |||||| || || | ||||||| |||||| ||||  |||||||||||| |||||||    
T  10437910 ggaatgagcaagtggaagaaatagagaaaaatgggaggggaggtctttggggggttaacttttctttataatacaaaatcctcctcatttagaggaacta 10438009  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
    |||||||||||| ||||||||||||||    
T  10438010 aaaagttgtattggaggagggttttgg 10438036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 5772871 - 5772751
Alignment:
Q  107 gagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaag 206  Q
    |||||||||||||||| ||| || |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | |||| ||||||     
T  5772871 gagcaagtggaagaaatagaagaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaattaaaaaa 5772773  T
Q  207 ttgtattagaggagggttttgg 228  Q
    ||||||| ||||||||||||||    
T  5772772 ttgtattggaggagggttttgg 5772751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 273
Target Start/End: Original strand, 29022592 - 29022712
Alignment:
Q  150 ggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg-gtttata 248  Q
    |||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||| |||||| || |||||  |||| ||||| |    
T  29022592 ggaggatt-atttttcttcaaaatataaaactctcctcattta-aggaactaaaaaattgtattggaggacggtttttgggaattt--gaggagtttaaa 29022687  T
Q  249 tgaattaatcaaatttaatctatgt 273  Q
    ||||||  ||||||||||| |||||    
T  29022688 tgaattcttcaaatttaatatatgt 29022712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 263
Target Start/End: Original strand, 35700984 - 35701145
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||||||||| |||||| ||| ||||| ||||    ||||||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  35700984 ggaaggagcaagtgaaagaaatagaagacattgggaggagagggctttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 35701083  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatt 263  Q
    |||| ||||||| | |||||||||||||   || |||||||||||||||||||  |||||||    
T  35701084 aaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatt 35701145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 37508508 - 37508371
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggtttt-gggcaattttggag 240  Q
    ||||||||||||| |   ||||| ||||||||| |||| || |||||||| | |||||| |||| ||||||| | |||||||||| |||   || |||||    
T  37508508 agggctttggaggttaattttttattcataataaaaaattcccctcatttggaggaactcaaaaattgtattgggggagggtttttggggggttatggag 37508409  T
Q  241 ggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||  ||||||| ||||||||||||||    
T  37508408 ggtttatatgaatttttcaaattcaatctatgttgtta 37508371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 3938230 - 3938123
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||  |||||||||| || ||||||| ||||||||||||| ||||||| ||| ||| ||||||| | ||| |||| |||||||||||||  ||    
T  3938230 atttttcttcgaaatataaaaccctgctcattttggggaactaaaaaattgtattggagtaggattttggg-agtttgggagagtttatatgaattcttc 3938132  T
Q  259 aaatttaat 267  Q
    |||||||||    
T  3938131 aaatttaat 3938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 10955806 - 10955674
Alignment:
Q  143 gggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggaggg 242  Q
    ||||||||| || || | ||||| |||||||| ||||| |||||||||| ||||||||||||  ||||||| ||||||| ||||| |   |||| ||| |    
T  10955806 gggctttggggggttaacttttcatcataatacaaaaccctcctcatttgggggaactaaaagattgtattggaggaggattttgaggggttttagagag 10955707  T
Q  243 tttatatgaattaatcaaatttaatctatgttg 275  Q
    || |||| ||||  |||||||||||||||||||    
T  10955706 ttaatatcaattcttcaaatttaatctatgttg 10955674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 278
Target Start/End: Original strand, 17092902 - 17092997
Alignment:
Q  183 tcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||| ||| |||| |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  17092902 tcctcatttggggaaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 17092997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 10842978 - 10843095
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| |  |||| || |||||||||| || || | |||||||||||||| ||||| |||||||||| | ||||||||||| ||||    
T  10842978 aagtggaagaaatagaggaaaatgggagaggagggctttggggg-ttaacttttcttcataatacaaaaccctcctcatttggaggaactaaaaaattgt 10843076  T
Q  211 attagaggagggttttggg 229  Q
    |||  |||| |||||||||    
T  10843077 attgaaggacggttttggg 10843095  T

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Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 1658101 - 1658273
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||| ||||||||| |   |||||  |||||||| ||||  ||| |||||| |||||| |     
T  1658101 ggaaggagcaagtggaagaaatagaagacattgggaggagaggactttggaggttaattttttagtcataataaaaaatcctcttcatttgggggaattc 1658200  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||| ||||||| | ||||| |||| ||   || |||||||||||||||||||  ||||||| ||||||||||    
T  1658201 aaaaattgtattgggggaggatttttggaggttatggagggtttatatgaatttttcaaattcaatctatgtt 1658273  T

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Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 26149527 - 26149703
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||| ||||||||||||| ||| ||||| ||||    ||||||||||||| |   |||||  || ||||| |||| || | |||||| ||||||||     
T  26149527 ggaaggatcaagtggaagaaatagaagacattgggaggagagggctttggaggttaattttttactcgtaataaaaaagtcccatcatttgggggaactc 26149626  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| |  |||||||||| |   || |||||| ||||||||||||  ||||||| ||||||||||||||    
T  26149627 aaaaattgtattgggagagggttttgaggggttatggaggatttatatgaatttttcaaattcaatctatgttgtta 26149703  T

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Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 35708909 - 35708743
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| ||||||||||||  |||||||| || |  || ||||||||| || ||  |||||||||| | |||||||  ||||||||||  ||||||||    
T  35708909 ggaaggagtaagtggaagaaattgaggacattggaag-gaggggctttggggggttagtttttcttcaaagtataaaatcctcctcatttgagggaacta 35708811  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||| | |||||||||||||         ||| ||||||||||||||  ||||||||||| ||||||||||    
T  35708810 aaaaattgtactggaggagggttttg---------ggaaggtttatatgaattcttcaaatttaatatatgttgtta 35708743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 38928859 - 38928683
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| || |    ||| ||||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  38928859 ggaaggagcaagtggaagaaatagaagacattggaatgagaggactttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 38928760  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| |||||||   |||||||||||||   || ||||| |||||||||||||  ||||||  ||||||||||||||    
T  38928759 aaaaattgtattgcgggagggttttggggggttatggagtgtttatatgaatttttcaaatccaatctatgttgtta 38928683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 274
Target Start/End: Original strand, 39428868 - 39429037
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||| ||| |||||||||||| ||| ||||||| || | | ||||||| | || || |||| |||||| |||||||||   ||||||||| | |||||||    
T  39428868 ggaaagagtaagtggaagaaatagatgacatcgagaga-atgggctttagcggctt-atttatcttcaaaatataaaatcttcctcattt-gaggaacta 39428964  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||| |||||||||||||||||||||||   |||  ||  |||||||||||||  ||||||||||| ||||||    
T  39428965 aaaaattgtattagaggagggttttgggtggtttgagaaagtttatatgaattcttcaaatttaatatatgtt 39429037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 41694901 - 41695077
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| || |    || | |||||||| |   |||||  |||||||| ||||  | |||||||| ||||||||     
T  41694901 ggaaggagcaagtggaagaaatagaagacattggaaggagagagttttggaggttaattttttactcataataaaaaatccccctcatttgggggaactc 41695000  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||||||||| |  ||| |||| |||||| |||||||  ||||||| ||||||||||||||    
T  41695001 aaaaattgtattgggggagggttttgagggattatggatggtttaaatgaatttttcaaattcaatctatgttgtta 41695077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 19389920 - 19389809
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatta 255  Q
    ||||||| ||||||||||| ||||  |||||||||| ||||||||||||| ||||||| |||||||          ||||||||||||||| |||||||     
T  19389920 ttcatttatcttcataatacaaaatcctcctcattt-ggggaactaaaaaattgtattggaggagg----------attttggagggtttacatgaattc 19389832  T
Q  256 atcaaatttaatctatgttgtta 278  Q
     ||||||||||||||||| ||||    
T  19389831 ttcaaatttaatctatgtagtta 19389809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 1935174 - 1935088
Alignment:
Q  193 ggggaacta-aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||| |||| ||||||| |||||||| ||||||   ||||||||||||||| ||||||  ||||||||||| ||||||||||    
T  1935174 ggggaactacaaaaattgtattggaggagggctttggggggttttggagggtttatgtgaattcttcaaatttaatatatgttgtta 1935088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 5836866 - 5836923
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtatt 213  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||| |||| |||||||    
T  5836866 ttcatttttcttcataatacaaaactcttctcatttgggggaacttaaaaattgtatt 5836923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 14570157 - 14570031
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    ||||||||||||| || | ||||||| ||||||  |||| |||||||||| || |||||||||| || |||| ||| ||||          |||||||||    
T  14570157 agggctttggagggttaacttttctttataatactaaaccctcctcatttgggagaactaaaaaattatattggagtaggg----------ttttggagg 14570068  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  |||||||||||||| |||||||    
T  14570067 gtttatatgaattcttcaaatttaatctaagttgtta 14570031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 43497010 - 43496895
Alignment:
Q  108 agcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagt 207  Q
    |||||||| |||||| | |||| |  |||| || |||||||||| || || ||||||||| |||||| |||||||| ||||||| |||||||| |||| |    
T  43497010 agcaagtgaaagaaataaaggaaaatgggagaggagggctttggggg-ttaatttttcttaataatacaaaactctgctcattt-ggggaacttaaaaat 43496913  T
Q  208 tgtattagaggagggttt 225  Q
    |||||| |||||||||||    
T  43496912 tgtattggaggagggttt 43496895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 275
Target Start/End: Complemental strand, 3676604 - 3676499
Alignment:
Q  160 tttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatca 259  Q
    ||||| || |||||| ||||||||| | ||||||||||| |||||| ||||||| |||||||          |||||| ||||||||||||||||  |||    
T  3676604 tttttttttataatacaaaactctctttatttaggggaaataaaaaattgtattggaggagg----------attttgaagggtttatatgaattcttca 3676515  T
Q  260 aatttaatctatgttg 275  Q
    ||||||||||||||||    
T  3676514 aatttaatctatgttg 3676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 3925891 - 3925812
Alignment:
Q  148 ttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||| ||||| |||||||||||| ||||| || ||||||||||| ||||||||||||| ||||||| || ||| |||||||    
T  3925891 ttgggggattaatttttcttcatgatatagaattctcctcattt-ggggaactaaaaaattgtattggatgagagttttgg 3925812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 10295407 - 10295583
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||||| ||||    | ||||||||||| |   |||||  |||||||| ||||  | | || ||| |||||| |     
T  10295407 ggaaggagcaagtggaagaaatagaagacattgggaggagatggctttggaggttaattttttactcataataaaaaatccccgtcttttgggggaattc 10295506  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | | ||| |||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  10295507 aaaaattgtattggggaaggattttgggaggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 10295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 274
Target Start/End: Complemental strand, 3081477 - 3081317
Alignment:
Q  111 aagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgt 210  Q
    |||||||||||| |||||| || ||||  |||||||||||| || || |||||||||||  ||||||||| ||||||||||    |||||||||| || |    
T  3081477 aagtggaagaaatagaggatattgggag-gaagggctttgggggctt-atttttcttcaatatataaaaccctcctcatttgatagaactaaaaaattat 3081380  T
Q  211 attagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    ||| || ||| ||||||||   |||  |||||||||||||||||  | ||||||||| ||||||    
T  3081379 attggatgagagttttggg-ggtttgagagggtttatatgaattctttaaatttaatatatgtt 3081317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 41923211 - 41923258
Alignment:
Q  231 aattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  41923211 aattttgaagggtttatatgaattcttcaaatttaatctatgttgtta 41923258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 9684884 - 9684811
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||| |||||||||||||| ||||| |||||||||| |||||| |||||| ||| |||  |||| |||||||||    
T  9684884 ttcaattttcttcataatacaaaaccctcctcatttgggggaattaaaaaattgcattgaaggaaggttttggg 9684811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 2020905 - 2021080
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||  ||||| ||||    || |||||||||| |   |||||  |||||||| ||||  | |||| ||| | ||||||     
T  2020905 ggaaggagcaagtggaagaaatagtagacattgggaggagagagctttggaggttaattttttactcataataaaaaatccccctc-tttggaggaactc 2021003  T
Q  202 aaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||| ||||||| | ||||||||||| |   || |||||||||||||||||||  | ||||| ||||||||||||||    
T  2021004 aaaaattgtattgggggagggttttgaggggttatggagggtttatatgaattttttaaattcaatctatgttgtta 2021080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 6632630 - 6632734
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatc 258  Q
    ||||||||||  |||||||||  ||| |||||| || |||||||||| || |||| ||||||   |||||| | |||  |||||||||||||||||| ||    
T  6632630 atttttcttccaaatataaaatcctcatcattttggagaactaaaaatttatattggaggagaaatttggggagtttgagagggtttatatgaattattc 6632729  T
Q  259 aaatt 263  Q
    |||||    
T  6632730 aaatt 6632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 12229561 - 12229493
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttggg 229  Q
    |||||||||||||  ||||  | ||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  12229561 ttttcttcataattcaaaatccccctgatttgggggaactacaaaattgtattagaggagggttttggg 12229493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 39011829 - 39011932
Alignment:
Q  175 taaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    |||||||||||||||||  | |||||||||| |||||||   |||||||||| || | ||| ||| | ||||||||||||  | ||||||||| |||||     
T  39011829 taaaactctcctcatttgagagaactaaaaaattgtattgatggagggtttttgggagtttgggaagatttatatgaattcttaaaatttaatatatgta 39011928  T
Q  275 gtta 278  Q
    ||||    
T  39011929 gtta 39011932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 17668161 - 17668115
Alignment:
Q  232 attttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||| |||||||  ||||||||||||||||| ||||    
T  17668161 attttggagggtttacatgaattcttcaaatttaatctatgtagtta 17668115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 21916450 - 21916344
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    |||||||| || ||||||||| ||| ||||  ||||  | ||| |||||  || || |||||||||||| ||| ||||| ||||| |||| |||||||||    
T  21916450 ggaaggagtaattggaagaaatagatgacactgggaggggaggactttgaggggttaatttttcttcatgatacaaaaccctccttatttgggggaacta 21916351  T
Q  202 aaaagtt 208  Q
    |||||||    
T  21916350 aaaagtt 21916344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 18675749 - 18675708
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgtt 274  Q
    ||||||||||||||||||||||  || |||||||||||||||    
T  18675749 ttttggagggtttatatgaattcttcgaatttaatctatgtt 18675708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 37909046 - 37909091
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||||||  ||||||| ||||||| ||||||    
T  37909046 ttttggagggtttatatgaattcttcaaattcaatctatattgtta 37909091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 39027723 - 39027839
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||  ||||| |||| |||| |||||| ||| ||||||||| || ||||| |||||  ||||||| | ||||| | ||||||||| |||   | ||    
T  39027723 ttttcttggtaatacaaaaatctcttcattttgggaaactaaaaaattatattaaaggagaattttggg-agttttgaatggtttatataaatcttttaa 39027821  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||||||||||    
T  39027822 atttaatctatgttgtta 39027839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 43496903 - 43496862
Alignment:
Q  237 ggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||||||||||||||  ||||||||||| ||||||||||    
T  43496903 ggagggtttatatgaattcttcaaatttaatttatgttgtta 43496862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 1978030 - 1977963
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg 227  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||| |||| ||| | | |||||||||||||    
T  1978030 atttttcttcgtaatacaaaaccctcctgatttaggggaactcaaaa-ttgcaatggaggagggttttg 1977963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 8944035 - 8944145
Alignment:
Q  166 ttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaattta 265  Q
    |||||||||  ||||  ||||||||| | ||||||||||| ||||||  || ||||||||| ||   ||||||| ||| ||||||||||  |||||||||    
T  8944035 ttcataatactaaaccttcctcatttggaggaactaaaaa-ttgtatcggatgagggtttttgggg-ttttggaaggtgtatatgaattcttcaaattta 8944132  T
Q  266 atctatgttgtta 278  Q
    || ||||||||||    
T  8944133 atatatgttgtta 8944145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 19338690 - 19338579
Alignment:
Q  143 gggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttg-ggcaattttggagg 241  Q
    ||||||||| ||||| ||||||||||| |||||||||| ||  |  |||  |||||||||||| |||||||  |||||| ||||| ||   ||| |||||    
T  19338690 gggctttgggggatt-atttttcttcaaaatataaaacccttatggtttgagggaactaaaaaattgtattgaaggaggattttgagggggtttaggagg 19338592  T
Q  242 gtttatatgaatt 254  Q
    |||||||||||||    
T  19338591 gtttatatgaatt 19338579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 29709501 - 29709573
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgg 228  Q
    |||| |||||| ||||||| |||| |||||||||||   ||||||||||| ||||||  ||||||| ||||||    
T  29709501 ttcacttttctccataatacaaaattctcctcatttgaaggaactaaaaaattgtatcggaggaggattttgg 29709573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 93604 - 93487
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| ||||||| |||||||||||||||   |||| ||||||| ||| ||||   ||||    
T  93604 ttttcttcataatacaaaactctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttttcgagggttaataagaatgcttcaa 93505  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||| ||||||||||    
T  93504 atttaatttatgttgtta 93487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 54; Significance: 5e-22; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 6855 - 6738
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||  ||||||| |||||||||||||||   ||| | |||||| |||||||||  ||||    
T  6855 ttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaa 6756  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||| ||||||    
T  6755 atttaatctatcttgtta 6738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 7838 - 7721
Alignment:
Q  161 ttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaa 260  Q
    |||||||||||||| ||||| |||||||||| | ||||||||||  ||||||| |||||||||||||||   ||| | |||||| |||||||||  ||||    
T  7838 ttttcttcataatacaaaaccctcctcatttggaggaactaaaacattgtattggaggagggttttggggggtttcgaagggttaatatgaattcttcaa 7739  T
Q  261 atttaatctatgttgtta 278  Q
    ||||||||||| ||||||    
T  7738 atttaatctatcttgtta 7721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 801 - 672
Alignment:
Q  148 ttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttat 247  Q
    ||||||| || | |||||||||||||| ||||| |||||||||| | ||||||||||  |||| || ||||| ||||||| |   ||| | |||||| ||    
T  801 ttggagggttaacttttcttcataatacaaaaccctcctcattt-gaggaactaaaacattgtcttggaggatggttttgtggggtttcgaagggttaat 703  T
Q  248 atgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||  ||||||||||||||| ||||||    
T  702 atgaattcttcaaatttaatctatcttgtta 672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 3678 - 3549
Alignment:
Q  148 ttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttat 247  Q
    ||||||| || | |||||||||||||| ||||| |||||||||| | ||||||||||  |||| || ||||| ||||||| |   ||| | |||||| ||    
T  3678 ttggagggttaacttttcttcataatacaaaaccctcctcattt-gaggaactaaaacattgtcttggaggatggttttgtggggtttcgaagggttaat 3580  T
Q  248 atgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||  ||||||||||||||| ||||||    
T  3579 atgaattcttcaaatttaatctatcttgtta 3549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 278
Target Start/End: Complemental strand, 35611 - 35436
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacaga-agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaact 200  Q
    |||||||||||||| |||||| ||| ||||| |||| ||| || |||||||||| |   |||||  |||||||| |||| || |||||||| ||||||||    
T  35611 ggaaggagcaagtgaaagaaatagaagacattggga-agagagagctttggaggttaattttttactcataataaaaaattcccctcattt-ggggaact 35514  T
Q  201 aaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
     |||| ||||||| | |||||||||||||   || |||||||||||||||||||  ||||||| ||||||||||||||    
T  35513 caaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgtta 35436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 15899 - 15987
Alignment:
Q  159 atttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttata 248  Q
    |||||||||||||||  |||| ||||||||||| |||||| | |||| ||||||| |||||||||||||||  |||||||| ||||||||    
T  15899 atttttcttcataatgaaaaaatctcctcattt-ggggaatttaaaaattgtattggaggagggttttgggggattttggaaggtttata 15987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 37135 - 37221
Alignment:
Q  193 ggggaactaaaaag-ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  |||||||  | |||||||||| |  |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  37135 ggggaactaaaaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaatatatgttgtta 37221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 30458 - 30542
Alignment:
Q  182 ctcctcatttaggggaactaaaaag-ttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaa 266  Q
    |||||||||| |||||||||||||  |||||||  | |||||||||| |  |||||||||||||||||||||||  ||||||||||    
T  30458 ctcctcattt-ggggaactaaaaaaattgtattgaatgagggttttgagagattttggagggtttatatgaattcttcaaatttaa 30542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 267
Target Start/End: Complemental strand, 9471 - 9397
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaat 267  Q
    ||||||||||||| ||||| | |||||||||||||||   |||  |||||||||||||||||  |||||||||||    
T  9471 ggggaactaaaaaattgtactggaggagggttttgggggctttgagagggtttatatgaattcttcaaatttaat 9397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 82720 - 82846
Alignment:
Q  102 ggaaggagcaagtggaagaaacagaggacatcgggacagaagggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaacta 201  Q
    ||||||||||||||||||||| ||| ||| | | || | ||||||||| | || || |||||||||||||||| ||||  ||||| ||||  |||||||     
T  82720 ggaaggagcaagtggaagaaatagatgactttgagagaaaagggctttcgggggtttatttttcttcataatacaaaatcctcctaatttgagggaactc 82819  T
Q  202 aaaagttgtattagaggagggttttgg 228  Q
     ||| ||||||| ||||| | ||||||    
T  82820 caaaattgtattggaggatgattttgg 82846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 12285 - 12240
Alignment:
Q  233 ttttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||    
T  12285 ttttggatggtttatatgaattcttcaaatttaatctatgttgtta 12240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 90992 - 90866
Alignment:
Q  142 agggctttggaggattcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagg 241  Q
    |||||||||| || || | ||||||||||| || ||||| |||||||||  ||  || |||||| ||||||| ||||||||||          ||||| |    
T  90992 agggctttggggggttaacttttcttcatattacaaaaccctcctcattggggataattaaaaaattgtattggaggagggtt----------ttggatg 90903  T
Q  242 gtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||||||||  ||||||||||||||||||||||    
T  90902 gtttatatgaattcttcaaatttaatctatgttgtta 90866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 1595 - 1678
Alignment:
Q  195 ggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||| |||| ||||||| | |||||||||||||   || | |||||||||||||||||  ||||||  ||||||||||||||    
T  1595 ggaactcaaaaattgtattgggggagggttttggggggttatagagggtttatatgaatttttcaaatccaatctatgttgtta 1678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 4128 - 4226
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||||||||||| |||| ||||  | ||||||||  |||  || ||||   ||||| |||||||||||||||   ||||||||||||||||||||||    
T  4128 ttcatttttcttcaaaatacaaaatccgcctcatttgagggctctcaaaaaccgtattggaggagggttttggggggttttggagggtttatatgaatt 4226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 4459 - 4557
Alignment:
Q  156 ttcatttttcttcataatataaaactctcctcatttaggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaatt 254  Q
    |||||||||||||| |||| ||||  | ||||||||  |||  || ||||   ||||| |||||||||||||||   ||||||||||||||||||||||    
T  4459 ttcatttttcttcaaaatacaaaatccgcctcatttgagggctctcaaaaaccgtattggaggagggttttggggggttttggagggtttatatgaatt 4557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 155 - 240
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| ||||||| | ||||||||||| |   || |||||||||||||| ||||  ||||||  ||||||||||||||    
T  155 ggggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaatccaatctatgttgtta 240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 2438 - 2353
Alignment:
Q  193 ggggaactaaaaagttgtattagaggagggttttgggcaattttggagggtttatatgaattaatcaaatttaatctatgttgtta 278  Q
    |||||||| |||| ||||||| | ||||||||||| |   || |||||||||||||| ||||  ||||||  ||||||||||||||    
T  2438 ggggaactcaaaaattgtattgggggagggttttgaggggttatggagggtttatataaatttttcaaatccaatctatgttgtta 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 7128 - 7168
Alignment:
Q  235 ttggagggtttatatgaattaatcaaatttaatctatgttg 275  Q
    ||||||||||||||||||||  | |||||||||||||||||    
T  7128 ttggagggtttatatgaattttttaaatttaatctatgttg 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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