View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7551_low_18 (Length: 297)

Name: NF7551_low_18
Description: NF7551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7551_low_18
NF7551_low_18
[»] chr8 (12 HSPs)
chr8 (1-278)||(40932931-40933215)
chr8 (241-272)||(7745-7776)
chr8 (241-272)||(40422161-40422192)
chr8 (241-272)||(41182055-41182086)
chr8 (241-272)||(41251124-41251155)
chr8 (241-271)||(22763755-22763785)
chr8 (243-272)||(20096023-20096052)
chr8 (239-272)||(26740070-26740103)
chr8 (243-272)||(29190511-29190540)
chr8 (241-273)||(27856900-27856932)
chr8 (236-272)||(31689891-31689927)
chr8 (241-273)||(41802162-41802194)
[»] chr1 (14 HSPs)
chr1 (235-275)||(12577361-12577401)
chr1 (243-275)||(34176119-34176151)
chr1 (241-272)||(5926873-5926904)
chr1 (241-272)||(8890561-8890592)
chr1 (241-272)||(19755757-19755788)
chr1 (241-272)||(46850010-46850041)
chr1 (241-272)||(49003227-49003258)
chr1 (241-275)||(10019567-10019601)
chr1 (241-275)||(30830325-30830359)
chr1 (241-275)||(33347417-33347451)
chr1 (241-274)||(6056729-6056762)
chr1 (241-274)||(24701619-24701652)
chr1 (243-272)||(35312172-35312201)
chr1 (241-278)||(46544925-46544962)
[»] chr4 (13 HSPs)
chr4 (241-275)||(35730663-35730697)
chr4 (241-274)||(8286933-8286966)
chr4 (241-274)||(37678198-37678231)
chr4 (241-272)||(489377-489408)
chr4 (241-272)||(515169-515200)
chr4 (241-272)||(8287285-8287316)
chr4 (241-272)||(27813207-27813238)
chr4 (241-272)||(37678042-37678073)
chr4 (241-272)||(54961432-54961463)
chr4 (242-272)||(47980687-47980717)
chr4 (241-278)||(13872070-13872107)
chr4 (235-272)||(22250085-22250122)
chr4 (242-275)||(48507570-48507603)
[»] chr2 (5 HSPs)
chr2 (241-275)||(5608788-5608822)
chr2 (241-272)||(20911131-20911162)
chr2 (241-272)||(22309432-22309463)
chr2 (241-275)||(32519504-32519538)
chr2 (235-272)||(22309783-22309820)
[»] chr6 (9 HSPs)
chr6 (242-275)||(7612704-7612737)
chr6 (235-275)||(3299554-3299594)
chr6 (241-272)||(7612549-7612580)
chr6 (241-272)||(16704661-16704692)
chr6 (241-275)||(26503703-26503737)
chr6 (235-272)||(13480203-13480240)
chr6 (239-272)||(26542972-26543005)
chr6 (243-272)||(32337567-32337596)
chr6 (243-271)||(31879461-31879489)
[»] scaffold0202 (1 HSPs)
scaffold0202 (243-275)||(14238-14270)
[»] chr7 (6 HSPs)
chr7 (236-272)||(12928391-12928427)
chr7 (233-272)||(5280265-5280304)
chr7 (241-272)||(27558007-27558038)
chr7 (241-272)||(27558204-27558235)
chr7 (241-271)||(47121631-47121661)
chr7 (243-275)||(5636374-5636406)
[»] chr3 (8 HSPs)
chr3 (240-272)||(33458270-33458302)
chr3 (243-278)||(21300479-21300514)
chr3 (243-274)||(24576291-24576322)
chr3 (241-272)||(35432407-35432438)
chr3 (241-272)||(35432510-35432541)
chr3 (235-272)||(1741382-1741419)
chr3 (241-278)||(51279232-51279269)
chr3 (243-272)||(55036672-55036701)
[»] scaffold0279 (2 HSPs)
scaffold0279 (241-272)||(10854-10885)
scaffold0279 (241-272)||(11051-11082)
[»] scaffold0206 (1 HSPs)
scaffold0206 (241-272)||(10326-10357)
[»] chr5 (10 HSPs)
chr5 (241-272)||(7015509-7015540)
chr5 (241-272)||(14745449-14745480)
chr5 (241-272)||(16118145-16118176)
chr5 (241-272)||(33735665-33735696)
chr5 (241-275)||(7015858-7015892)
chr5 (241-274)||(16118301-16118334)
chr5 (239-272)||(27753478-27753511)
chr5 (243-275)||(6421971-6422003)
chr5 (239-275)||(18934712-18934748)
chr5 (241-269)||(22533584-22533612)
[»] scaffold0233 (1 HSPs)
scaffold0233 (241-271)||(8593-8623)
[»] scaffold0321 (1 HSPs)
scaffold0321 (236-272)||(11014-11050)
[»] scaffold0022 (1 HSPs)
scaffold0022 (242-278)||(120352-120388)


Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 40932931 - 40933215
Alignment:
Q  1 aagtgcgtgatccctca-----tcaaaggagagcatagcctcctctctagcaatctgttaagccaaaattacatagtgaagagattagagaatatccatg 95  Q
    |||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40932931 aagtgcgtgatccctcaaccattcaaaggagagcatagcctcctctctagcaatctgttaagccaaaattacatagtgaagagattagagaatatccatg 40933030  T
Q  96 atttcttgatacttctacgaattgcatgaaaagagaggacctaaattaaaggacaaaacaagctacatnnnnnnntctaagttta-ggattttgatggtg 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||||| |||    
T  40933031 atttcttgatacttctacgaattgcatgaaaagagaggacctaaattaaaggacaaaacaagctacataaaaaaaactaagtttatggattttgattgtg 40933130  T
Q  195 gtaaatggtggttgtacc-ttgcttcataaaagacattaaattttaagcttaaataggtctttcgtccctgcaaatataagttat 278  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||   |||||||||||||| ||| |||||||||||||||||    
T  40933131 gtaaatggtggttgtacctttgcttcatagaagacattaaattttagatttaaataggtcttttgtctctgcaaatataagttat 40933215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 7776 - 7745
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  7776 gcttaaataggtctttcgtccctgcaaatata 7745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 40422161 - 40422192
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  40422161 gcttaaataggtctttcgtccctgcaaatata 40422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 41182086 - 41182055
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  41182086 gcttaaataggtctttcgtccctgcaaatata 41182055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 41251124 - 41251155
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  41251124 gcttaaataggtctttcgtccctgcaaatata 41251155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 271
Target Start/End: Complemental strand, 22763785 - 22763755
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatat 271  Q
    |||||||||||||||||||||||||||||||    
T  22763785 gcttaaataggtctttcgtccctgcaaatat 22763755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Original strand, 20096023 - 20096052
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||    
T  20096023 ttaaataggtctttcgtccctgcaaatata 20096052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 26740103 - 26740070
Alignment:
Q  239 aagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||| ||||||||||||||||||||||    
T  26740103 aagcttaaatatgtctttcgtccctgcaaatata 26740070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 29190540 - 29190511
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||    
T  29190540 ttaaataggtctttcgtccctgcaaatata 29190511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 27856932 - 27856900
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataa 273  Q
    ||||||||||||||||| |||||||||||||||    
T  27856932 gcttaaataggtctttcatccctgcaaatataa 27856900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 31689891 - 31689927
Alignment:
Q  236 tttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    |||| |||||||||||||||| |||||||||||||||    
T  31689891 tttaggcttaaataggtcttttgtccctgcaaatata 31689927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 273
Target Start/End: Complemental strand, 41802194 - 41802162
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataa 273  Q
    ||||||||||||||||||| |||||||||||||    
T  41802194 gcttaaataggtctttcgttcctgcaaatataa 41802162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 12577401 - 12577361
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  12577401 ttttaggcttaaataggtctttcgtccctgcaaatataagt 12577361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 34176119 - 34176151
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||||||||||||||||||||||||    
T  34176119 ttaaataggtctttcgtccctgcaaatataagt 34176151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 5926904 - 5926873
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  5926904 gcttaaataggtctttcgtccctgcaaatata 5926873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 8890592 - 8890561
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  8890592 gcttaaataggtctttcgtccctgcaaatata 8890561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 19755788 - 19755757
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  19755788 gcttaaataggtctttcgtccctgcaaatata 19755757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 46850041 - 46850010
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  46850041 gcttaaataggtctttcgtccctgcaaatata 46850010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 49003258 - 49003227
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  49003258 gcttaaataggtctttcgtccctgcaaatata 49003227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 10019567 - 10019601
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||| ||||||||||||||||||||||    
T  10019567 gcttaaataggtatttcgtccctgcaaatataagt 10019601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 30830325 - 30830359
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||| |||||||||||||||||||||||||    
T  30830325 gcttaaataagtctttcgtccctgcaaatataagt 30830359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 33347417 - 33347451
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||| |||||||||||||||||||||||||    
T  33347417 gcttaaatatgtctttcgtccctgcaaatataagt 33347451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 6056762 - 6056729
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||| ||||||||||||||||||||||||    
T  6056762 gcttaaatatgtctttcgtccctgcaaatataag 6056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 24701652 - 24701619
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||||||||||| ||||||||||||||||    
T  24701652 gcttaaataggtctttcatccctgcaaatataag 24701619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Original strand, 35312172 - 35312201
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||    
T  35312172 ttaaataggtctttcgtccctgcaaatata 35312201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 46544925 - 46544962
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagttat 278  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  46544925 gcttaaatagatctttcgtccctgcaaatatatgttat 46544962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 35730663 - 35730697
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||||||||||||||||||||||||||    
T  35730663 gcttaaataggtctttcgtccctgcaaatataagt 35730697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 8286933 - 8286966
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||||||||||||||||||||||||||||    
T  8286933 gcttaaataggtctttcgtccctgcaaatataag 8286966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 37678231 - 37678198
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||||||||||||||||||||||||||||    
T  37678231 gcttaaataggtctttcgtccctgcaaatataag 37678198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 489377 - 489408
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  489377 gcttaaataggtctttcgtccctgcaaatata 489408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 515169 - 515200
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  515169 gcttaaataggtctttcgtccctgcaaatata 515200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 8287316 - 8287285
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  8287316 gcttaaataggtctttcgtccctgcaaatata 8287285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 27813238 - 27813207
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  27813238 gcttaaataggtctttcgtccctgcaaatata 27813207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 37678042 - 37678073
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  37678042 gcttaaataggtctttcgtccctgcaaatata 37678073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 54961432 - 54961463
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  54961432 gcttaaataggtctttcgtccctgcaaatata 54961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 47980687 - 47980717
Alignment:
Q  242 cttaaataggtctttcgtccctgcaaatata 272  Q
    |||||||||||||||||||||||||||||||    
T  47980687 cttaaataggtctttcgtccctgcaaatata 47980717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 13872070 - 13872107
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagttat 278  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  13872070 gcttaaatatgtctttcgtccctgcaaatataggttat 13872107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 22250122 - 22250085
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  22250122 ttttaggcttaaatatgtctttcgtccctgcaaatata 22250085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 48507603 - 48507570
Alignment:
Q  242 cttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||| ||||||||||||||||||||||||    
T  48507603 cttaaatagatctttcgtccctgcaaatataagt 48507570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 275
Target Start/End: Original strand, 5608788 - 5608822
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||||||||||||||||||||||||||    
T  5608788 gcttaaataggtctttcgtccctgcaaatataagt 5608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 20911131 - 20911162
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  20911131 gcttaaataggtctttcgtccctgcaaatata 20911162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 22309432 - 22309463
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  22309432 gcttaaataggtctttcgtccctgcaaatata 22309463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 32519538 - 32519504
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||| |||||||||||||||||||||||||    
T  32519538 gcttaaatatgtctttcgtccctgcaaatataagt 32519504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 22309820 - 22309783
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  22309820 ttttaggcttaaataggtctttcttccctgcaaatata 22309783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 275
Target Start/End: Complemental strand, 7612737 - 7612704
Alignment:
Q  242 cttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||||||||||||||||||||||||||||    
T  7612737 cttaaataggtctttcgtccctgcaaatataagt 7612704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Original strand, 3299554 - 3299594
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  3299554 ttttaggcttaaataggtctttcgtctctgcaaatataagt 3299594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 7612549 - 7612580
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  7612549 gcttaaataggtctttcgtccctgcaaatata 7612580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 16704692 - 16704661
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  16704692 gcttaaataggtctttcgtccctgcaaatata 16704661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 26503737 - 26503703
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||| ||||||||||||||||||||||    
T  26503737 gcttaaataggtttttcgtccctgcaaatataagt 26503703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 13480203 - 13480240
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  13480203 ttttaggcttaaatatgtctttcgtccctgcaaatata 13480240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 26543005 - 26542972
Alignment:
Q  239 aagcttaaataggtctttcgtccctgcaaatata 272  Q
    |||||||| |||||||||||||||||||||||||    
T  26543005 aagcttaattaggtctttcgtccctgcaaatata 26542972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Original strand, 32337567 - 32337596
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||    
T  32337567 ttaaataggtctttcgtccctgcaaatata 32337596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 271
Target Start/End: Original strand, 31879461 - 31879489
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatat 271  Q
    |||||||||||||||||||||||||||||    
T  31879461 ttaaataggtctttcgtccctgcaaatat 31879489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 275
Target Start/End: Original strand, 14238 - 14270
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||||||||||||||||||||||||    
T  14238 ttaaataggtctttcgtccctgcaaatataagt 14270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 12928427 - 12928391
Alignment:
Q  236 tttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12928427 tttaagcttaaataggtcttttgtccctgcaaatata 12928391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 5280265 - 5280304
Alignment:
Q  233 aattttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  5280265 aattttaggcttaaataagtctttcgtccctgcaaatata 5280304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 27558038 - 27558007
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  27558038 gcttaaataggtctttcgtccctgcaaatata 27558007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 27558235 - 27558204
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  27558235 gcttaaataggtctttcgtccctgcaaatata 27558204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 271
Target Start/End: Complemental strand, 47121661 - 47121631
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatat 271  Q
    |||||||||||||||||||||||||||||||    
T  47121661 gcttaaataggtctttcgtccctgcaaatat 47121631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 5636406 - 5636374
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||||||||||||| |||||||||||||    
T  5636406 ttaaataggtctttcgtccttgcaaatataagt 5636374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 33458302 - 33458270
Alignment:
Q  240 agcttaaataggtctttcgtccctgcaaatata 272  Q
    |||||||||||||||||||||||||||||||||    
T  33458302 agcttaaataggtctttcgtccctgcaaatata 33458270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 278
Target Start/End: Complemental strand, 21300514 - 21300479
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataagttat 278  Q
    |||||||||||||||||||||||||||||| |||||    
T  21300514 ttaaataggtctttcgtccctgcaaatatatgttat 21300479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 274
Target Start/End: Original strand, 24576291 - 24576322
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||||||||||||||||||||||||||    
T  24576291 ttaaataggtctttcgtccctgcaaatataag 24576322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 35432407 - 35432438
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  35432407 gcttaaataggtctttcgtccctgcaaatata 35432438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 35432541 - 35432510
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  35432541 gcttaaataggtctttcgtccctgcaaatata 35432510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 1741382 - 1741419
Alignment:
Q  235 ttttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  1741382 ttttaggcttaaatatgtctttcgtccctgcaaatata 1741419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 51279232 - 51279269
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagttat 278  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  51279232 gcttaaatatgtctttcgtccctgcaaatataggttat 51279269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 272
Target Start/End: Original strand, 55036672 - 55036701
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||    
T  55036672 ttaaataggtctttcgtccctgcaaatata 55036701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 10854 - 10885
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  10854 gcttaaataggtctttcgtccctgcaaatata 10885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 11051 - 11082
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  11051 gcttaaataggtctttcgtccctgcaaatata 11082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 10326 - 10357
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  10326 gcttaaataggtctttcgtccctgcaaatata 10357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 7015509 - 7015540
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  7015509 gcttaaataggtctttcgtccctgcaaatata 7015540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 14745449 - 14745480
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  14745449 gcttaaataggtctttcgtccctgcaaatata 14745480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 16118145 - 16118176
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  16118145 gcttaaataggtctttcgtccctgcaaatata 16118176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 33735696 - 33735665
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatata 272  Q
    ||||||||||||||||||||||||||||||||    
T  33735696 gcttaaataggtctttcgtccctgcaaatata 33735665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 7015892 - 7015858
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||||||||||||||| |||||||||||||    
T  7015892 gcttaaataggtctttcgtccttgcaaatataagt 7015858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 16118334 - 16118301
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatataag 274  Q
    ||||||||||||||||| ||||||||||||||||    
T  16118334 gcttaaataggtctttcatccctgcaaatataag 16118301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 272
Target Start/End: Original strand, 27753478 - 27753511
Alignment:
Q  239 aagcttaaataggtctttcgtccctgcaaatata 272  Q
    |||||||| |||||||||||||||||||||||||    
T  27753478 aagcttaagtaggtctttcgtccctgcaaatata 27753511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 6422003 - 6421971
Alignment:
Q  243 ttaaataggtctttcgtccctgcaaatataagt 275  Q
    |||||||||||||||| ||||||||||||||||    
T  6422003 ttaaataggtctttcgcccctgcaaatataagt 6421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 18934712 - 18934748
Alignment:
Q  239 aagcttaaataggtctttcgtccctgcaaatataagt 275  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  18934712 aagcttaaatatgtctttcatccctgcaaatataagt 18934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 22533584 - 22533612
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaat 269  Q
    |||||||||||||||||||||||||||||    
T  22533584 gcttaaataggtctttcgtccctgcaaat 22533612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 271
Target Start/End: Complemental strand, 8623 - 8593
Alignment:
Q  241 gcttaaataggtctttcgtccctgcaaatat 271  Q
    |||||||||||||||||||||||||||||||    
T  8623 gcttaaataggtctttcgtccctgcaaatat 8593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 11050 - 11014
Alignment:
Q  236 tttaagcttaaataggtctttcgtccctgcaaatata 272  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  11050 tttaggcttaaatatgtctttcgtccctgcaaatata 11014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 120388 - 120352
Alignment:
Q  242 cttaaataggtctttcgtccctgcaaatataagttat 278  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  120388 cttaaatagatctttcgtccctgcaaatatatgttat 120352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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