View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7559_low_28 (Length: 239)
Name: NF7559_low_28
Description: NF7559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7559_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 45758901 - 45759122
Alignment:
| Q |
1 |
aaaaacaatttccactctgcaatattcaaagatgatcccaagttcacaacctcaataacaatctaataaatctaacaataaaaactaacaacgaggtatt |
100 |
Q |
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| T |
45758901 |
aaaaacaatttccaccctgcaatattcaaagatgatcccaagttcacaacctcaataacatt-taataaatctaacaaaaaaaactaacaacgaggtatt |
45758999 |
T |
|
| Q |
101 |
aacaaggtgaaaaaagtagatgaaccattatgagataccaactgattatgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaa |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45759000 |
aacaaggggaaaaaagtagatgaaccattatgagataccaactgattatgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaa |
45759099 |
T |
|
| Q |
201 |
tacacagtccatagtacaaaatt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
45759100 |
tacacagtccatagtacaaaatt |
45759122 |
T |
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