View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7561_high_4 (Length: 348)

Name: NF7561_high_4
Description: NF7561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7561_high_4
NF7561_high_4
[»] chr7 (78 HSPs)
chr7 (13-198)||(14805781-14805965)
chr7 (13-198)||(15252775-15252959)
chr7 (13-198)||(18102440-18102625)
chr7 (25-198)||(25737692-25737864)
chr7 (13-198)||(46760322-46760507)
chr7 (13-198)||(35923163-35923347)
chr7 (13-198)||(45485864-45486050)
chr7 (13-190)||(19912842-19913017)
chr7 (13-140)||(12633110-12633237)
chr7 (99-198)||(25944572-25944671)
chr7 (13-132)||(16562659-16562778)
chr7 (13-132)||(16602884-16603003)
chr7 (99-198)||(6191041-6191140)
chr7 (99-198)||(20123745-20123844)
chr7 (99-198)||(4910698-4910797)
chr7 (99-195)||(22632085-22632181)
chr7 (99-195)||(47779600-47779696)
chr7 (13-79)||(25944456-25944522)
chr7 (99-198)||(47557666-47557765)
chr7 (25-87)||(47557922-47557984)
chr7 (13-76)||(47778652-47778715)
chr7 (99-198)||(9158086-9158184)
chr7 (99-194)||(44682874-44682968)
chr7 (25-76)||(4910850-4910901)
chr7 (13-76)||(9157970-9158033)
chr7 (99-195)||(14574560-14574656)
chr7 (13-76)||(22631967-22632030)
chr7 (13-76)||(44600341-44600404)
chr7 (33-87)||(39174181-39174235)
chr7 (99-193)||(15995715-15995809)
chr7 (15-76)||(18800919-18800980)
chr7 (15-76)||(30082261-30082322)
chr7 (13-77)||(20123896-20123960)
chr7 (99-198)||(2610633-2610732)
chr7 (99-146)||(11780014-11780061)
chr7 (13-76)||(36576313-36576376)
chr7 (13-76)||(41815849-41815912)
chr7 (13-76)||(43108062-43108125)
chr7 (13-63)||(6190925-6190975)
chr7 (100-194)||(27810804-27810898)
chr7 (13-76)||(9818375-9818439)
chr7 (13-76)||(10720300-10720364)
chr7 (162-198)||(12632409-12632445)
chr7 (33-77)||(24151776-24151820)
chr7 (25-77)||(35069051-35069103)
chr7 (13-76)||(3157331-3157394)
chr7 (99-195)||(16917468-16917563)
chr7 (13-76)||(19933211-19933274)
chr7 (13-76)||(19964350-19964413)
chr7 (13-76)||(34808114-34808177)
chr7 (13-76)||(35181087-35181150)
chr7 (13-76)||(41890416-41890479)
chr7 (13-76)||(42617566-42617629)
chr7 (13-76)||(45598799-45598862)
chr7 (99-137)||(35068961-35068999)
chr7 (25-74)||(37767214-37767263)
chr7 (25-74)||(38260226-38260275)
chr7 (35-76)||(39337444-39337485)
chr7 (100-147)||(4068972-4069020)
chr7 (15-63)||(22624025-22624073)
chr7 (13-76)||(23106347-23106411)
chr7 (158-198)||(35068914-35068954)
chr7 (98-194)||(4237784-4237880)
chr7 (13-76)||(32491262-32491325)
chr7 (37-76)||(39348708-39348747)
chr7 (13-76)||(47383301-47383364)
chr7 (25-63)||(31280630-31280668)
chr7 (39-77)||(44682778-44682816)
chr7 (157-198)||(4069057-4069098)
chr7 (32-81)||(18206459-18206508)
chr7 (157-198)||(31549968-31550009)
chr7 (13-66)||(40560277-40560330)
chr7 (157-194)||(48413772-48413809)
chr7 (108-136)||(21654207-21654235)
chr7 (158-198)||(24151647-24151687)
chr7 (25-69)||(31550103-31550147)
chr7 (170-198)||(31769027-31769055)
chr7 (108-136)||(41890328-41890356)
[»] chr5 (79 HSPs)
chr5 (13-198)||(11261950-11262134)
chr5 (28-198)||(6686309-6686479)
chr5 (13-198)||(37562828-37563012)
chr5 (13-198)||(43590028-43590213)
chr5 (13-198)||(37522655-37522840)
chr5 (99-198)||(20644010-20644109)
chr5 (99-198)||(32110998-32111097)
chr5 (15-130)||(842698-842813)
chr5 (99-194)||(42273645-42273738)
chr5 (99-198)||(32017700-32017798)
chr5 (99-198)||(38130182-38130281)
chr5 (99-198)||(38280843-38280942)
chr5 (13-77)||(12730204-12730268)
chr5 (101-198)||(20039100-20039197)
chr5 (13-77)||(42273529-42273593)
chr5 (99-195)||(9957488-9957581)
chr5 (13-76)||(25840743-25840806)
chr5 (13-79)||(20643894-20643960)
chr5 (99-198)||(34425327-34425425)
chr5 (13-77)||(8225343-8225407)
chr5 (13-77)||(12793024-12793088)
chr5 (99-195)||(4463356-4463452)
chr5 (13-76)||(39505450-39505513)
chr5 (25-79)||(9957631-9957685)
chr5 (100-195)||(19413138-19413233)
chr5 (99-195)||(25840860-25840956)
chr5 (99-193)||(17351384-17351478)
chr5 (99-198)||(8225459-8225557)
chr5 (13-77)||(20038982-20039046)
chr5 (99-193)||(39505304-39505397)
chr5 (14-77)||(34425212-34425274)
chr5 (13-76)||(35462916-35462979)
chr5 (99-141)||(12730103-12730145)
chr5 (103-198)||(43454389-43454484)
chr5 (13-76)||(16286281-16286344)
chr5 (13-76)||(32433554-32433616)
chr5 (25-79)||(7071130-7071184)
chr5 (104-195)||(42104317-42104408)
chr5 (100-141)||(104345-104386)
chr5 (99-136)||(12792929-12792966)
chr5 (25-77)||(17351272-17351325)
chr5 (109-198)||(10153994-10154083)
chr5 (109-198)||(12912360-12912449)
chr5 (25-77)||(16153543-16153595)
chr5 (32-76)||(25962650-25962694)
chr5 (34-77)||(104437-104480)
chr5 (13-76)||(8146211-8146274)
chr5 (13-76)||(20914757-20914820)
chr5 (13-76)||(42364937-42365000)
chr5 (99-149)||(5984230-5984280)
chr5 (15-77)||(28906970-28907031)
chr5 (15-77)||(28943365-28943426)
chr5 (16-76)||(2002320-2002381)
chr5 (15-76)||(24439472-24439533)
chr5 (13-77)||(32017585-32017649)
chr5 (32-77)||(32110901-32110946)
chr5 (158-198)||(5369097-5369137)
chr5 (32-76)||(38130334-38130378)
chr5 (13-56)||(4463224-4463267)
chr5 (99-138)||(7071234-7071273)
chr5 (25-76)||(8143844-8143895)
chr5 (13-76)||(13146627-13146690)
chr5 (13-76)||(30086746-30086809)
chr5 (13-76)||(31690818-31690881)
chr5 (27-74)||(32079418-32079465)
chr5 (13-63)||(5081844-5081894)
chr5 (99-133)||(23233395-23233429)
chr5 (157-198)||(104280-104321)
chr5 (40-77)||(6391795-6391832)
chr5 (157-198)||(12729941-12729981)
chr5 (157-198)||(12792843-12792883)
chr5 (36-77)||(38280748-38280789)
chr5 (33-77)||(1144694-1144738)
chr5 (99-139)||(1238522-1238562)
chr5 (158-190)||(5984182-5984214)
chr5 (33-77)||(8959559-8959603)
chr5 (170-198)||(8959707-8959735)
chr5 (108-136)||(17825326-17825354)
chr5 (33-77)||(29307387-29307431)
[»] chr4 (85 HSPs)
chr4 (13-198)||(14332668-14332853)
chr4 (13-198)||(47867788-47867972)
chr4 (13-198)||(2229155-2229340)
chr4 (13-198)||(20281502-20281684)
chr4 (13-198)||(56318129-56318313)
chr4 (13-198)||(26916235-26916418)
chr4 (13-198)||(41414670-41414851)
chr4 (25-198)||(28669060-28669231)
chr4 (99-198)||(29203500-29203599)
chr4 (13-198)||(7654535-7654710)
chr4 (99-198)||(4058709-4058808)
chr4 (99-198)||(20716174-20716273)
chr4 (99-198)||(10069691-10069790)
chr4 (99-198)||(17794600-17794699)
chr4 (99-198)||(55580663-55580763)
chr4 (99-198)||(5483337-5483436)
chr4 (13-77)||(17186992-17187056)
chr4 (99-194)||(39078151-39078246)
chr4 (99-193)||(35310806-35310900)
chr4 (15-76)||(35529551-35529612)
chr4 (99-193)||(35529666-35529760)
chr4 (13-77)||(39078035-39078099)
chr4 (99-188)||(52535654-52535743)
chr4 (13-76)||(16605046-16605109)
chr4 (13-76)||(42915407-42915470)
chr4 (99-193)||(1585411-1585505)
chr4 (105-194)||(24940365-24940454)
chr4 (99-195)||(48793690-48793784)
chr4 (13-76)||(32012491-32012554)
chr4 (13-76)||(48793837-48793900)
chr4 (13-75)||(55580544-55580607)
chr4 (99-193)||(42915523-42915618)
chr4 (15-76)||(30012117-30012178)
chr4 (15-76)||(47516383-47516444)
chr4 (121-198)||(16604905-16604982)
chr4 (13-76)||(29180576-29180639)
chr4 (13-76)||(35310954-35311017)
chr4 (13-76)||(50768338-50768401)
chr4 (99-193)||(25297286-25297380)
chr4 (13-77)||(4058592-4058656)
chr4 (17-76)||(12002846-12002905)
chr4 (13-76)||(55937867-55937930)
chr4 (15-77)||(8013280-8013341)
chr4 (42-79)||(29203414-29203451)
chr4 (13-77)||(10069575-10069638)
chr4 (15-63)||(46070726-46070774)
chr4 (13-65)||(52535809-52535861)
chr4 (99-190)||(8683373-8683462)
chr4 (13-76)||(30776648-30776711)
chr4 (13-76)||(30777380-30777443)
chr4 (13-76)||(39970153-39970216)
chr4 (99-187)||(50080521-50080609)
chr4 (23-77)||(28318608-28318662)
chr4 (15-77)||(37911784-37911845)
chr4 (15-77)||(53848366-53848428)
chr4 (15-76)||(5222462-5222523)
chr4 (157-198)||(17186854-17186895)
chr4 (99-140)||(32280104-32280145)
chr4 (109-198)||(46070581-46070668)
chr4 (158-198)||(5841838-5841878)
chr4 (99-135)||(14583723-14583759)
chr4 (32-76)||(38940781-38940825)
chr4 (13-76)||(49901919-49901983)
chr4 (17-76)||(19351721-19351780)
chr4 (13-76)||(29899608-29899671)
chr4 (13-76)||(37788344-37788407)
chr4 (13-76)||(52712956-52713019)
chr4 (39-77)||(4512954-4512992)
chr4 (157-195)||(17799196-17799234)
chr4 (13-63)||(24521191-24521241)
chr4 (100-195)||(50145731-50145826)
chr4 (99-140)||(21722783-21722824)
chr4 (169-198)||(23978174-23978203)
chr4 (169-198)||(28318476-28318505)
chr4 (169-198)||(49080321-49080350)
chr4 (48-76)||(8683515-8683543)
chr4 (157-193)||(12002704-12002740)
chr4 (25-77)||(29511355-29511406)
chr4 (170-198)||(29511490-29511518)
chr4 (158-198)||(47516250-47516290)
chr4 (13-65)||(47806791-47806843)
chr4 (33-77)||(49080172-49080216)
chr4 (25-69)||(50080678-50080722)
chr4 (25-77)||(50145646-50145697)
chr4 (36-76)||(53677643-53677683)
[»] chr1 (119 HSPs)
chr1 (13-198)||(32624071-32624256)
chr1 (13-198)||(12449033-12449217)
chr1 (25-198)||(39555652-39555824)
chr1 (13-192)||(24190382-24190558)
chr1 (25-198)||(2125960-2126133)
chr1 (13-198)||(43667369-43667550)
chr1 (13-198)||(35691302-35691488)
chr1 (25-198)||(42965881-42966051)
chr1 (99-198)||(15959706-15959805)
chr1 (99-194)||(6785452-6785547)
chr1 (13-194)||(32983241-32983420)
chr1 (99-198)||(47600105-47600204)
chr1 (47-195)||(28120824-28120970)
chr1 (99-198)||(45226134-45226233)
chr1 (99-192)||(33369549-33369640)
chr1 (99-194)||(6786834-6786929)
chr1 (99-194)||(40718674-40718769)
chr1 (13-77)||(6786717-6786781)
chr1 (99-196)||(7468031-7468128)
chr1 (99-198)||(28016812-28016909)
chr1 (13-79)||(15959855-15959921)
chr1 (99-198)||(47014557-47014655)
chr1 (13-77)||(6787208-6787272)
chr1 (102-195)||(16854139-16854232)
chr1 (107-198)||(13136619-13136708)
chr1 (13-76)||(44149050-44149113)
chr1 (99-198)||(1820411-1820509)
chr1 (99-198)||(2246080-2246179)
chr1 (99-194)||(39932642-39932737)
chr1 (99-198)||(3875083-3875186)
chr1 (13-77)||(7468170-7468235)
chr1 (99-195)||(3076291-3076387)
chr1 (99-195)||(24728696-24728792)
chr1 (12-74)||(46542860-46542923)
chr1 (99-198)||(46542980-46543077)
chr1 (99-198)||(6787056-6787154)
chr1 (100-195)||(10558825-10558920)
chr1 (32-77)||(28016961-28017006)
chr1 (13-77)||(4672779-4672843)
chr1 (99-198)||(50369954-50370056)
chr1 (99-187)||(23392243-23392330)
chr1 (13-76)||(29488644-29488707)
chr1 (99-198)||(33431557-33431654)
chr1 (99-195)||(37735452-37735548)
chr1 (13-63)||(16854015-16854065)
chr1 (99-198)||(46818568-46818667)
chr1 (13-77)||(6785335-6785400)
chr1 (109-198)||(5858437-5858526)
chr1 (13-77)||(11240925-11240989)
chr1 (13-77)||(47600257-47600321)
chr1 (15-77)||(5858569-5858632)
chr1 (13-76)||(9127939-9128002)
chr1 (13-76)||(26907290-26907353)
chr1 (14-77)||(33369434-33369497)
chr1 (13-76)||(38942642-38942705)
chr1 (13-76)||(40935814-40935877)
chr1 (13-76)||(40960675-40960738)
chr1 (13-76)||(44875075-44875138)
chr1 (13-76)||(46949217-46949280)
chr1 (14-77)||(47026375-47026438)
chr1 (99-198)||(47302972-47303071)
chr1 (13-76)||(49924315-49924378)
chr1 (115-198)||(7876008-7876091)
chr1 (99-137)||(25391680-25391718)
chr1 (15-77)||(41063642-41063704)
chr1 (99-198)||(43765290-43765389)
chr1 (99-193)||(3861766-3861858)
chr1 (157-198)||(11241081-11241122)
chr1 (99-195)||(44148905-44148997)
chr1 (25-77)||(298884-298936)
chr1 (25-77)||(1820307-1820359)
chr1 (99-139)||(50012587-50012627)
chr1 (13-76)||(15285700-15285763)
chr1 (13-76)||(23874028-23874091)
chr1 (13-76)||(25990645-25990707)
chr1 (13-76)||(40219953-40220016)
chr1 (13-76)||(45358077-45358140)
chr1 (13-56)||(50665137-50665180)
chr1 (19-77)||(5950344-5950402)
chr1 (15-77)||(7397608-7397670)
chr1 (99-137)||(11241039-11241077)
chr1 (15-77)||(16661417-16661478)
chr1 (157-195)||(32318629-32318667)
chr1 (99-149)||(50665259-50665309)
chr1 (158-198)||(5950494-5950534)
chr1 (109-198)||(7397712-7397801)
chr1 (158-198)||(16688191-16688231)
chr1 (36-76)||(35189119-35189159)
chr1 (25-77)||(50369860-50369912)
chr1 (163-195)||(52984993-52985025)
chr1 (13-76)||(3076176-3076238)
chr1 (163-198)||(8889763-8889798)
chr1 (13-76)||(18852119-18852182)
chr1 (14-61)||(24728860-24728907)
chr1 (13-76)||(26479635-26479698)
chr1 (13-76)||(28916716-28916779)
chr1 (13-76)||(39026447-39026509)
chr1 (25-64)||(45840259-45840298)
chr1 (99-137)||(1034854-1034892)
chr1 (32-74)||(33431459-33431501)
chr1 (33-75)||(43765204-43765245)
chr1 (33-63)||(44056513-44056543)
chr1 (13-63)||(47014723-47014773)
chr1 (121-195)||(298738-298812)
chr1 (169-198)||(13351746-13351775)
chr1 (32-77)||(35366401-35366446)
chr1 (15-64)||(44512602-44512651)
chr1 (41-77)||(3875240-3875276)
chr1 (32-76)||(4529102-4529146)
chr1 (13-69)||(13136774-13136830)
chr1 (170-198)||(15912265-15912293)
chr1 (15-63)||(16688058-16688105)
chr1 (32-76)||(18036460-18036503)
chr1 (158-198)||(35366269-35366309)
chr1 (33-77)||(37538728-37538772)
chr1 (158-198)||(37538864-37538904)
chr1 (109-149)||(43359696-43359736)
chr1 (25-77)||(46804729-46804781)
chr1 (32-76)||(51339097-51339141)
[»] chr6 (28 HSPs)
chr6 (13-198)||(3095785-3095971)
chr6 (13-198)||(21542329-21542513)
chr6 (13-198)||(35129120-35129305)
chr6 (13-198)||(11082311-11082495)
chr6 (13-198)||(34177707-34177891)
chr6 (99-195)||(7274944-7275040)
chr6 (99-198)||(12461495-12461594)
chr6 (99-198)||(30794258-30794357)
chr6 (13-76)||(7275095-7275158)
chr6 (25-77)||(1130428-1130480)
chr6 (13-76)||(10227808-10227871)
chr6 (33-76)||(30949051-30949094)
chr6 (15-74)||(32882882-32882941)
chr6 (99-177)||(9428766-9428844)
chr6 (99-136)||(31107187-31107224)
chr6 (32-72)||(17598208-17598248)
chr6 (36-76)||(17722007-17722047)
chr6 (163-198)||(5300666-5300701)
chr6 (15-62)||(5300805-5300852)
chr6 (13-76)||(12278602-12278665)
chr6 (13-76)||(30766342-30766405)
chr6 (13-76)||(31887320-31887383)
chr6 (15-77)||(4987842-4987904)
chr6 (99-190)||(17751818-17751909)
chr6 (169-198)||(16013498-16013527)
chr6 (169-198)||(16524443-16524472)
chr6 (36-76)||(374018-374058)
chr6 (25-77)||(3888336-3888388)
[»] chr2 (71 HSPs)
chr2 (13-198)||(41528168-41528351)
chr2 (13-198)||(6110264-6110450)
chr2 (13-192)||(35517033-35517212)
chr2 (25-198)||(28599213-28599386)
chr2 (13-198)||(3201246-3201421)
chr2 (33-198)||(45085188-45085352)
chr2 (99-198)||(45660361-45660460)
chr2 (99-198)||(19264095-19264195)
chr2 (99-198)||(28858305-28858404)
chr2 (99-198)||(33198696-33198795)
chr2 (13-79)||(19263979-19264045)
chr2 (99-195)||(29524109-29524205)
chr2 (99-195)||(40584466-40584562)
chr2 (99-198)||(11617020-11617119)
chr2 (13-77)||(33198851-33198915)
chr2 (99-198)||(14873958-14874058)
chr2 (99-195)||(25572042-25572137)
chr2 (13-77)||(5280697-5280761)
chr2 (102-195)||(8701601-8701694)
chr2 (99-198)||(6765998-6766098)
chr2 (13-76)||(29524258-29524321)
chr2 (99-198)||(24204594-24204693)
chr2 (99-198)||(33677479-33677578)
chr2 (303-348)||(11319768-11319813)
chr2 (15-76)||(18834109-18834170)
chr2 (13-77)||(45660241-45660306)
chr2 (99-192)||(5963197-5963290)
chr2 (13-76)||(25571923-25571987)
chr2 (13-77)||(28858189-28858253)
chr2 (25-77)||(38070907-38070959)
chr2 (13-76)||(21539653-21539716)
chr2 (13-76)||(33635232-33635295)
chr2 (99-198)||(12938238-12938337)
chr2 (99-195)||(9864787-9864881)
chr2 (13-76)||(40808930-40808994)
chr2 (13-76)||(792553-792616)
chr2 (13-76)||(8701481-8701544)
chr2 (13-76)||(18454945-18455008)
chr2 (13-76)||(29514216-29514279)
chr2 (99-141)||(7645352-7645394)
chr2 (99-149)||(30421296-30421346)
chr2 (13-76)||(28492416-28492479)
chr2 (13-76)||(38549840-38549903)
chr2 (99-146)||(39696916-39696963)
chr2 (15-77)||(9709416-9709477)
chr2 (25-63)||(14873852-14873890)
chr2 (15-65)||(15068644-15068694)
chr2 (15-77)||(26998219-26998280)
chr2 (99-141)||(30830718-30830760)
chr2 (99-137)||(44454987-44455025)
chr2 (13-65)||(4033883-4033935)
chr2 (36-76)||(14565571-14565611)
chr2 (25-77)||(32273582-32273634)
chr2 (13-76)||(4091906-4091969)
chr2 (13-76)||(8784291-8784354)
chr2 (13-76)||(10979088-10979150)
chr2 (32-79)||(20380041-20380088)
chr2 (13-76)||(29514672-29514734)
chr2 (25-76)||(35022788-35022839)
chr2 (13-63)||(10478071-10478121)
chr2 (35-77)||(11616925-11616967)
chr2 (15-77)||(32010003-32010065)
chr2 (169-198)||(26998383-26998412)
chr2 (165-198)||(35022961-35022994)
chr2 (157-198)||(35115869-35115910)
chr2 (170-198)||(16494991-16495019)
chr2 (36-76)||(28424193-28424233)
chr2 (17-77)||(30752029-30752089)
chr2 (36-76)||(35832331-35832371)
chr2 (159-195)||(40808787-40808823)
chr2 (170-198)||(43415468-43415496)
[»] scaffold0300 (1 HSPs)
scaffold0300 (13-198)||(639-823)
[»] chr8 (83 HSPs)
chr8 (13-198)||(7022470-7022655)
chr8 (13-198)||(7858437-7858621)
chr8 (13-193)||(41086458-41086637)
chr8 (99-198)||(34890241-34890340)
chr8 (25-198)||(26483454-26483625)
chr8 (99-198)||(36190766-36190865)
chr8 (13-198)||(15957978-15958166)
chr8 (99-191)||(8107692-8107783)
chr8 (99-198)||(13143758-13143857)
chr8 (99-198)||(31734109-31734208)
chr8 (99-198)||(28348605-28348703)
chr8 (99-194)||(7499720-7499816)
chr8 (99-198)||(8711870-8711970)
chr8 (99-187)||(24892832-24892920)
chr8 (99-198)||(34158358-34158457)
chr8 (13-79)||(34890390-34890456)
chr8 (99-198)||(43216414-43216513)
chr8 (104-196)||(3642039-3642130)
chr8 (99-198)||(35456091-35456190)
chr8 (13-77)||(24892716-24892780)
chr8 (13-77)||(35525476-35525540)
chr8 (25-76)||(4047113-4047164)
chr8 (13-76)||(36537957-36538020)
chr8 (99-190)||(4046969-4047060)
chr8 (113-196)||(30575904-30575987)
chr8 (99-195)||(2052830-2052924)
chr8 (25-77)||(13143654-13143706)
chr8 (25-77)||(13144179-13144231)
chr8 (25-77)||(36190661-36190713)
chr8 (13-76)||(11043956-11044019)
chr8 (13-76)||(24612679-24612742)
chr8 (99-195)||(29920338-29920434)
chr8 (15-77)||(5217291-5217353)
chr8 (99-141)||(8709908-8709950)
chr8 (25-87)||(20051499-20051560)
chr8 (33-77)||(30576045-30576089)
chr8 (13-76)||(3099851-3099914)
chr8 (99-195)||(16879462-16879558)
chr8 (13-76)||(25321785-25321848)
chr8 (13-76)||(27621029-27621092)
chr8 (13-76)||(35259956-35260019)
chr8 (99-141)||(13144085-13144127)
chr8 (15-77)||(17713122-17713184)
chr8 (121-196)||(35525603-35525678)
chr8 (13-63)||(43216587-43216637)
chr8 (32-77)||(8673298-8673343)
chr8 (32-77)||(29920489-29920534)
chr8 (32-79)||(8107834-8107882)
chr8 (33-77)||(38072114-38072158)
chr8 (13-76)||(41809022-41809086)
chr8 (13-76)||(27752485-27752548)
chr8 (34-77)||(28348511-28348553)
chr8 (13-76)||(33851222-33851285)
chr8 (33-75)||(41362846-41362888)
chr8 (14-76)||(44052520-44052582)
chr8 (19-72)||(2238785-2238838)
chr8 (157-198)||(13144013-13144054)
chr8 (99-173)||(15824723-15824797)
chr8 (15-76)||(24510883-24510944)
chr8 (15-60)||(41426190-41426235)
chr8 (13-77)||(8711754-8711818)
chr8 (25-77)||(17314739-17314791)
chr8 (158-198)||(17713276-17713316)
chr8 (158-198)||(26954459-26954499)
chr8 (36-76)||(37597992-37598032)
chr8 (13-76)||(31133783-31133846)
chr8 (13-76)||(32678708-32678771)
chr8 (35-77)||(33563728-33563770)
chr8 (13-63)||(40487885-40487935)
chr8 (99-149)||(41755920-41755970)
chr8 (169-198)||(8745647-8745676)
chr8 (157-198)||(16358178-16358219)
chr8 (169-198)||(17336806-17336835)
chr8 (169-198)||(25195113-25195142)
chr8 (32-77)||(26954591-26954636)
chr8 (25-77)||(31734003-31734056)
chr8 (169-198)||(41362374-41362403)
chr8 (158-198)||(2628231-2628271)
chr8 (13-72)||(7499602-7499662)
chr8 (32-76)||(16635357-16635401)
chr8 (32-76)||(16635493-16635537)
chr8 (25-77)||(34158509-34158561)
chr8 (36-76)||(35344288-35344328)
[»] chr3 (119 HSPs)
chr3 (25-198)||(23311618-23311790)
chr3 (25-198)||(11054337-11054505)
chr3 (13-198)||(37042442-37042626)
chr3 (13-198)||(36546457-36546641)
chr3 (13-198)||(36561674-36561858)
chr3 (13-198)||(30189485-30189670)
chr3 (13-198)||(47864104-47864290)
chr3 (99-198)||(14752233-14752332)
chr3 (103-198)||(579163-579258)
chr3 (99-198)||(6438083-6438182)
chr3 (99-194)||(28875406-28875501)
chr3 (99-198)||(50651062-50651161)
chr3 (99-198)||(54464920-54465019)
chr3 (99-196)||(6075081-6075178)
chr3 (13-138)||(23910580-23910705)
chr3 (13-79)||(14752382-14752448)
chr3 (99-194)||(7866512-7866607)
chr3 (99-198)||(35963152-35963251)
chr3 (104-194)||(34722634-34722724)
chr3 (99-198)||(46711683-46711781)
chr3 (99-194)||(32619859-32619954)
chr3 (99-198)||(8703109-8703206)
chr3 (99-198)||(9054996-9055093)
chr3 (99-198)||(37074958-37075059)
chr3 (99-195)||(2927289-2927385)
chr3 (99-195)||(3972275-3972371)
chr3 (99-195)||(3997507-3997603)
chr3 (99-195)||(47866941-47867036)
chr3 (99-193)||(6752670-6752764)
chr3 (100-198)||(20847293-20847391)
chr3 (99-193)||(26208014-26208108)
chr3 (13-74)||(33974738-33974799)
chr3 (99-198)||(53270233-53270334)
chr3 (25-77)||(7866659-7866711)
chr3 (13-149)||(48802554-48802696)
chr3 (13-76)||(2927172-2927235)
chr3 (99-187)||(46557237-46557325)
chr3 (15-77)||(21214140-21214202)
chr3 (15-77)||(22479211-22479273)
chr3 (13-79)||(28875290-28875356)
chr3 (15-77)||(38401279-38401341)
chr3 (13-79)||(54465065-54465130)
chr3 (13-77)||(6074965-6075030)
chr3 (13-74)||(35963033-35963094)
chr3 (32-77)||(37074861-37074906)
chr3 (109-198)||(34194892-34194981)
chr3 (99-188)||(38674870-38674959)
chr3 (13-76)||(21654141-21654204)
chr3 (13-76)||(37324248-37324311)
chr3 (13-76)||(45347828-45347891)
chr3 (13-77)||(6437962-6438028)
chr3 (99-198)||(19464075-19464174)
chr3 (15-77)||(22456165-22456227)
chr3 (15-77)||(23209437-23209499)
chr3 (99-194)||(26725020-26725115)
chr3 (99-149)||(33974633-33974683)
chr3 (157-198)||(23910538-23910579)
chr3 (157-198)||(29235245-29235286)
chr3 (15-76)||(36189167-36189227)
chr3 (109-198)||(8097043-8097132)
chr3 (99-139)||(41476413-41476453)
chr3 (13-76)||(1335007-1335070)
chr3 (33-76)||(16739315-16739358)
chr3 (25-76)||(19463970-19464021)
chr3 (13-76)||(23513464-23513527)
chr3 (13-76)||(26641272-26641335)
chr3 (13-76)||(28793058-28793121)
chr3 (13-76)||(31126109-31126172)
chr3 (104-139)||(34722564-34722599)
chr3 (14-77)||(41476505-41476566)
chr3 (13-76)||(51426514-51426577)
chr3 (99-149)||(9264008-9264058)
chr3 (13-63)||(26207718-26207768)
chr3 (13-63)||(34022518-34022568)
chr3 (99-141)||(50730109-50730151)
chr3 (99-141)||(50782703-50782745)
chr3 (15-65)||(54725772-54725822)
chr3 (32-77)||(2994575-2994620)
chr3 (32-77)||(46711835-46711880)
chr3 (32-77)||(50651213-50651258)
chr3 (13-77)||(579325-579389)
chr3 (33-77)||(6752571-6752615)
chr3 (109-198)||(7886642-7886731)
chr3 (25-77)||(8764837-8764889)
chr3 (158-194)||(9264610-9264646)
chr3 (158-198)||(16033012-16033052)
chr3 (25-77)||(31836849-31836900)
chr3 (32-76)||(45781313-45781357)
chr3 (158-198)||(46918238-46918278)
chr3 (25-77)||(49583874-49583926)
chr3 (13-77)||(51311556-51311619)
chr3 (37-76)||(3972174-3972213)
chr3 (37-76)||(3997665-3997704)
chr3 (101-140)||(8769644-8769683)
chr3 (15-77)||(34194786-34194849)
chr3 (13-76)||(43575855-43575918)
chr3 (25-76)||(46557379-46557430)
chr3 (13-76)||(46580433-46580496)
chr3 (13-76)||(46819946-46820009)
chr3 (163-198)||(54725635-54725670)
chr3 (13-76)||(55400635-55400698)
chr3 (15-77)||(10114811-10114872)
chr3 (25-63)||(30454896-30454934)
chr3 (15-77)||(32070146-32070207)
chr3 (99-141)||(36509540-36509582)
chr3 (99-141)||(41936271-41936313)
chr3 (15-77)||(47444133-47444195)
chr3 (101-138)||(8764746-8764783)
chr3 (169-198)||(10014333-10014362)
chr3 (169-198)||(10114975-10115004)
chr3 (32-77)||(10251927-10251972)
chr3 (169-198)||(10252075-10252104)
chr3 (25-78)||(26725167-26725220)
chr3 (158-195)||(31292664-31292701)
chr3 (13-66)||(32322409-32322462)
chr3 (25-77)||(8769738-8769789)
chr3 (36-76)||(13541197-13541237)
chr3 (36-76)||(49067033-49067073)
chr3 (108-136)||(51426621-51426649)
[»] scaffold0045 (1 HSPs)
scaffold0045 (25-198)||(77880-78052)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-198)||(154772-154956)
[»] scaffold0774 (1 HSPs)
scaffold0774 (13-198)||(3494-3674)
[»] scaffold0442 (1 HSPs)
scaffold0442 (36-198)||(9979-10140)
[»] scaffold0009 (2 HSPs)
scaffold0009 (99-192)||(157790-157883)
scaffold0009 (13-76)||(157673-157737)
[»] scaffold0062 (1 HSPs)
scaffold0062 (99-186)||(44849-44936)
[»] scaffold0132 (4 HSPs)
scaffold0132 (17-77)||(896-956)
scaffold0132 (17-77)||(8856-8916)
scaffold0132 (99-198)||(1008-1107)
scaffold0132 (99-198)||(8968-9067)
[»] scaffold0012 (1 HSPs)
scaffold0012 (99-195)||(160246-160342)
[»] scaffold0111 (1 HSPs)
scaffold0111 (99-198)||(40175-40274)
[»] scaffold0495 (1 HSPs)
scaffold0495 (13-76)||(4527-4590)
[»] scaffold0005 (1 HSPs)
scaffold0005 (99-135)||(233616-233652)
[»] scaffold0565 (1 HSPs)
scaffold0565 (15-77)||(6071-6132)
[»] scaffold0330 (1 HSPs)
scaffold0330 (15-77)||(3069-3131)
[»] scaffold1786 (1 HSPs)
scaffold1786 (99-140)||(860-900)
[»] scaffold1157 (1 HSPs)
scaffold1157 (25-74)||(2060-2108)


Alignment Details
Target: chr7 (Bit Score: 122; Significance: 2e-62; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 14805781 - 14805965
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||    
T  14805781 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagattttttttt-gttattctcataaaa 14805879  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  14805880 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 14805965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 15252775 - 15252959
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||    
T  15252775 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagattttttttt-gttattctcataaaa 15252873  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  15252874 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15252959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 18102440 - 18102625
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           ||||||||||||||    
T  18102440 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgtttattctcataaaa 18102539  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||| || |||||||       |||||||||| |||||||||||||||||||||||||||||||    
T  18102540 ttaaatgcaaattacattcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 18102625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 25737864 - 25737692
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||          |||||||||||||||||||||||||||    
T  25737864 aaaaacacattttctttgtcccaaaatataagcaaaaaaaaaaaacttttatcttttccaagattttttttt-gttattctcataaaattaaatgcaaat 25737766  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  25737765 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 25737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 46760507 - 46760322
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |          |||||||||||||||    
T  46760507 aatataaacaaaaaaaacatattttctttgtcccaaaatataagtaaaaaagacaaacttttatttttttcaatattttttttttgttattctcataaaa 46760408  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  46760407 ttaaatgcaaattacattcaatattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 46760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 35923163 - 35923347
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||| |          |||||||||||||||    
T  35923163 aatataagcaaaaaaaacacattttctttgtcccaaaatataataaaaaaagataaacttttatctttttcaatattttttttt-gttattctcataaaa 35923261  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  35923262 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 35923347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 45485864 - 45486050
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnn-gttattctcataaa 111  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||             ||||||||||||||    
T  45485864 aatataagcaaaaataacacattttctttgtccaaaaatataagcaaaaaagacaaaattttatcttttccaatttttttttttttgttattctcataaa 45485963  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||    
T  45485964 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 45486050  T

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Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 19913017 - 19912842
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| || |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||          ||||||||||| |||    
T  19913017 aatataagcaa-aataacacattttctttatcccaaaatataaataaaaaagacaaacttttatcttttccaagattttttttt-gttattctcatgaaa 19912920  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacat 190  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||    
T  19912919 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacat 19912842  T

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Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 12633237 - 12633110
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||           |||||||||||||    
T  12633237 aatataagcaaaaaaaaacacattttttttgtcccaaaatataatcaaaatagacaaacttttatcttttccaagattttttttgt-ttattctcataaa 12633139  T
Q  112 attaaatgcaaattacattcaattttctc 140  Q
    |||||||||||||||||||||||||||||    
T  12633138 attaaatgcaaattacattcaattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 25944572 - 25944671
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |       |||||||||| |||||||||||||||||||||||||||||||    
T  25944572 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 25944671  T

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Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 16562659 - 16562778
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||    
T  16562659 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaa 16562758  T
Q  113 ttaaatgcaaattacattca 132  Q
    ||||||||||||||| ||||    
T  16562759 ttaaatgcaaattactttca 16562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 16603003 - 16602884
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||            |||||||||||||||    
T  16603003 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaatttttatcttttccaattttttttttttgttattctcataaaa 16602904  T
Q  113 ttaaatgcaaattacattca 132  Q
    ||||||||||||||| ||||    
T  16602903 ttaaatgcaaattactttca 16602884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 6191041 - 6191140
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6191041 ttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 20123844 - 20123745
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||       ||||| ||||||||||||||||||||||||||||||| ||||    
T  20123844 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctat 20123745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 4910797 - 4910698
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||||       ||||| |||||||||||||||||| |||||||||||||||||    
T  4910797 ttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctat 4910698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 22632085 - 22632181
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| ||       ||||||||||| |||||||||||||||||||||||||||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcc 22632181  T

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Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 47779600 - 47779696
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| |       |||||||| | ||||||||||||||||||||||||||||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcc 47779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 25944456 - 25944522
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25944456 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 25944522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 47557765 - 47557666
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||||||       |||||  |||||||||||||||||||||||||||||||||||    
T  47557765 ttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcctat 47557666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 47557984 - 47557922
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaaga 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  47557984 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatgtttttcaaga 47557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 47778652 - 47778715
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  47778652 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttat 47778715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 9158086 - 9158184
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||| ||||||||||||||||||||||||||| ||| | | |||||||       |||||||||| ||||| |||||||||||||||||||||||||    
T  9158086 ttattcttataaaattaaatgcaaattacattcaaatttttttctctttcatttttt-cataaccaatggccaaagaaaattgtttttacatcttcctat 9158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 44682874 - 44682968
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||| ||||||| |||||||||||| ||||||||| | |||||||       |||||||||||| |||||||||||||||||||||||||    
T  44682874 ttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttctc-cataaccaatagtcaatgaaaattgtttttacatcttc 44682968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 4910901 - 4910850
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  4910901 aaaaacacattttctttgtcccaaaatataagcaaaaagaacaaacttttat 4910850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9157970 - 9158033
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||| ||||||||||||||||||||    
T  9157970 aatataagcaaaaaaaacttattttctttatcccaaaatataatcaaaaaagacaaacttttat 9158033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 14574560 - 14574656
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| ||       |||||||||||| ||||| ||||| ||||||||||||||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcc 14574656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 22631967 - 22632030
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| |||||||||||| | |||||||||||||||| |||||||||||||    
T  22631967 aatataagcaaaaaaaactcattttctttgttctaaaatataagcaaaaaggacaaacttttat 22632030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 44600341 - 44600404
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  44600341 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 44600404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 39174181 - 39174235
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaaga 87  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  39174181 attttctttgttccaaaatataagtaaaaaagacaaacttttatctttttcaaga 39174235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 15995715 - 15995809
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||||||||||||||||||||| | ||||||||| || |||| ||       ||||||||||| |||||| ||||| ||||||||||||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctt 15995809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 18800980 - 18800919
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| || |||| | |||||||||||||||||||||||||||||||||||| ||||||||    
T  18800980 tataagaaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacatacttttat 18800919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 30082261 - 30082322
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||||||||| || ||||||    
T  30082261 tataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagaccaatttttat 30082322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 20123960 - 20123896
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||||  ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  20123960 aatataagcaaaaaaaacttattttatttgtcccaaaatataatcaaaaaagacaaacgtttatc 20123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 2610732 - 2610633
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctt-tctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    |||||||||| ||||||| |||||||||||||||||||| |||| |||| ||       |||||||||||||||| ||||| |||||||||||||| |||    
T  2610732 ttattctcatgaaattaagtgcaaattacattcaatttt-tcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttcta 2610634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 11780014 - 11780061
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctt 146  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  11780014 ttattctcataaaattaaatgcaaattacatcaaattttctctttctt 11780061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 36576313 - 36576376
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||| | ||||||||||||| ||||||||||| |||||||||||||||||||    
T  36576313 aatataaggaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttat 36576376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41815912 - 41815849
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  41815912 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 41815849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 43108125 - 43108062
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  43108125 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 43108062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 6190925 - 6190975
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  6190925 aatataagcaaaaaaaactcattttctttgtcccaaaatataagaaaaaaa 6190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 27810898 - 27810804
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||| ||        |||| ||||| ||||| ||||||||||||||||||||    
T  27810898 tattctcatgaaattaaatgcaaattacattcaattttccatctcttccattttctatataatcaataaccaataaaaattgtttttacatcttc 27810804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9818375 - 9818439
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||| | |||||||||| || ||||||||||||||||||||| |||||||||    
T  9818375 aatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttat 9818439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 10720300 - 10720364
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||| | |||||||||| || ||||||||||||||||||||| |||||||||    
T  10720300 aatataagcaaaaaaaatctcattttctttttctcaaaatataagcaaaaaagaccaacttttat 10720364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 12632445 - 12632409
Alignment:
Q  162 ccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||    
T  12632445 ccaatagccaatgaaaattgtttttacatcttcctat 12632409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 24151820 - 24151776
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  24151820 attttctttgtcccaaattataagcaaaaaagaccaacttttatc 24151776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 35069103 - 35069051
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  35069103 aaaaaaacattttttttgtcccaaaatataagtaaaaatgacaaacttttatc 35069051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 3157331 - 3157394
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||||||| ||||| ||||||||||||||||||||| |||||||||    
T  3157331 aatataagcaaaaaaatttcattttccttgtctcaaaatataagcaaaaaagactaacttttat 3157394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 16917468 - 16917563
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| | || |        ||||||||||||  |||||||||||||||||||||||||    
T  16917468 ttattttcattaaattaaatgcaaattactttcaattttctctat-ttcccattttcacataaccaatagttaatgaaaattgtttttacatcttcc 16917563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 19933274 - 19933211
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   |||||||||| || |||||||||||||||||||| ||||||||||    
T  19933274 aatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttat 19933211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 19964413 - 19964350
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   |||||||||| || |||||||||||||||||||| ||||||||||    
T  19964413 aatataagcaaaaaaatttcattttctttatctcaaaatataagcaaaaaagataaacttttat 19964350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 34808114 - 34808177
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| |||||||||  |||||||||||||||||||| |||||||||    
T  34808114 aatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttat 34808177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 35181087 - 35181150
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| || |||||||||||||||||| |||||||||    
T  35181087 aatataagcaaaaaaatctcatattctttgtctcagaatataagcaaaaaagaccaacttttat 35181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41890479 - 41890416
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  41890479 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttat 41890416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 42617566 - 42617629
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| |||||| || |||||||||||||||||||||||||| ||||    
T  42617566 aatataagcaaaaaaatctcatattctttttctcaaaatataagcaaaaaagacaaactcttat 42617629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 45598799 - 45598862
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  45598799 aatataagcaaaaaaatctcatgttctttgtctcaaaatataagcaaaaaagactaatttttat 45598862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 35068999 - 35068961
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatttt 137  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35068999 ttattctcataatattaaatgcaaattacattcaatttt 35068961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 37767263 - 37767214
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    |||||| |||||||||||||| ||| |||||| |||||||||||||||||    
T  37767263 aaaaacccattttctttgtcctaaattataagtaaaaaagacaaactttt 37767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 38260226 - 38260275
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    |||||| |||||||||||||||||| |||||| |||||| ||||||||||    
T  38260226 aaaaactcattttctttgtcccaaattataagtaaaaaatacaaactttt 38260275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 39337444 - 39337485
Alignment:
Q  35 tttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  39337444 tttctttgtcccaaaatataagcaaaaaataccaacttttat 39337485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 4068972 - 4069020
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaa-ttttctctttcttt 147  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4068972 tattctcatgaaattaaatacaaattacattcaatttttctctttcttt 4069020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 22624073 - 22624025
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||  |||||| |||||||||||||||||| |||||||||||||    
T  22624073 tataagcataaaaaactcattttctttgtcccaaattataagcaaaaaa 22624025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 23106347 - 23106411
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagc-aaaaaagacaaacttttat 76  Q
    ||||||||||| |||| ||||| || |||||| |||||||||||| ||||||||| |||||||||    
T  23106347 aatataagcaaaaaaatcacatattatttgtctcaaaatataagcaaaaaaagactaacttttat 23106411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 35068954 - 35068914
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  35068954 ataaccaatagctaattaaaattgtttttacatcttcctat 35068914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 4237880 - 4237784
Alignment:
Q  98 gttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||| |||||||||||||||||||| |||||||| | | | |||| ||       | ||| ||||||||||| |||||| |||||||||||||    
T  4237880 gttattctaataaaattaaatgcaaattatattcaattatatttctcttccattttcttcctaatcaatagccaattaaaattatttttacatcttc 4237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 32491325 - 32491262
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| |  ||||||||||||  ||||||||||||||||| || |||||||||    
T  32491325 aatataagcaaaaaaatcttattttctttgtctgaaaatataagcaaaaaaaaccaacttttat 32491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 39348708 - 39348747
Alignment:
Q  37 tctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  39348708 tctttgtaccaaaatataagcaaaaaagaccaacttttat 39348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 47383301 - 47383364
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   || |||||||||| |||||||||||||||||| || |||||||||    
T  47383301 aatataagcaaaaaaatatcactttctttgtctcaaaatataagcaaaaaataccaacttttat 47383364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 31280668 - 31280630
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  31280668 aaaaacacactttctttgtcccaaaatataagtaaaaaa 31280630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 44682778 - 44682816
Alignment:
Q  39 tttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  44682778 tttgttccaaaatgtaagcaaaaaagacaaacttttatc 44682816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 4069057 - 4069098
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||| |||||||||||| |||||||||||| ||||    
T  4069057 cataaccaataaccaatgaaaattctttttacatctttctat 4069098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 18206508 - 18206459
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttt 81  Q
    ||||||||||||| |||||||||||||||||| || | ||||||| ||||    
T  18206508 cattttctttgtctcaaaatataagcaaaaaaaaccatcttttatgtttt 18206459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 31550009 - 31549968
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| | |||||||| ||||||||||||||||||||    
T  31550009 cataaccaattgtcaatgaaagttgtttttacatcttcctat 31549968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 40560277 - 40560330
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagac 66  Q
    ||||||||||| |||| |  |||||||||||| |||||||||| ||||||||||    
T  40560277 aatataagcaaaaaaatcttattttctttgtctcaaaatataatcaaaaaagac 40560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 48413772 - 48413809
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  48413772 cataaccaatagtcaatgaaaattgtttttgcatcttc 48413809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 21654235 - 21654207
Alignment:
Q  108 taaaattaaatgcaaattacattcaattt 136  Q
    |||||||||||||||||||||||||||||    
T  21654235 taaaattaaatgcaaattacattcaattt 21654207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 24151687 - 24151647
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||  || ||||||||||||||||||||||||||    
T  24151687 ataaccaataatcagtgaaaattgtttttacatcttcctat 24151647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 31550147 - 31550103
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaa 69  Q
    |||||| || ||||||||||||||||| |||| ||||||||||||    
T  31550147 aaaaactcaatttctttgtcccaaaatgtaagtaaaaaagacaaa 31550103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 31769055 - 31769027
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  31769055 caatgaaaattgtttttacatcttcctat 31769027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 41890356 - 41890328
Alignment:
Q  108 taaaattaaatgcaaattacattcaattt 136  Q
    |||||||||||||||||||||||||||||    
T  41890356 taaaattaaatgcaaattacattcaattt 41890328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 9e-61; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 11262134 - 11261950
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||           ||||||||||||||    
T  11262134 aatataagcaaaaaaaacacattttctttgtcccaaaatataagtaaaaaagacaaacttttatcttttccaagattttttttgt-ttattctcataaaa 11262036  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  11262035 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 11261950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 6686309 - 6686479
Alignment:
Q  28 aacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaattac 127  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||          ||||||||||||||||||||||||||||||    
T  6686309 aacacattttctttgtcccaaaatataaacaaaaaagataaacttttatcttttccaagattttttttttgttattctcataaaattaaatgcaaattac 6686408  T
Q  128 attcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6686409 attcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 6686479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 37563012 - 37562828
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||           ||||||||||||||    
T  37563012 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgt-ttattctcataaaa 37562914  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||| |||||||       ||||| ||||||| ||||||||||||||||||||||||||||    
T  37562913 ttaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctat 37562828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 43590213 - 43590028
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||          ||||||||||||||    
T  43590213 aatataagcaaaaaaaaacacattttctttgtaccaaaatataagcaaaaaatacaaacttttatctttttcaagattttttttt-gttattctcataaa 43590115  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||    
T  43590114 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 43590028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 37522840 - 37522655
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcat-aaa 111  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||            ||||||||| |||    
T  37522840 aatataagcaaaaaaaacacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgt-ctattctcataaaa 37522742  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||| |||||||       ||||| ||||||||||||||||||||||||||||||||||||    
T  37522741 attaaatgcaaattacattcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctat 37522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 20644010 - 20644109
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  20644010 ttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20644109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 32110998 - 32111097
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||       |||||||||||| |||||||||||||||||||||||||||||    
T  32110998 ttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcctat 32111097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 842813 - 842698
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaaga-nnnnnnnnnngttattctcataaaat 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||            |||||||||||||||    
T  842813 tataagcaa-aaaaacacattttctttgtcccaaaatataagcaaaaaagataaacttttatcttttccaagatttttttttttattattctcataaaat 842715  T
Q  114 taaatgcaaattacatt 130  Q
    |||||||||||||||||    
T  842714 taaatgcaaattacatt 842698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 42273645 - 42273738
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||       ||||||||||||||||||||||||||||||||||||||    
T  42273645 ttattctcataaaattaaatgcaaattgcattcaattttctc--tctttcattttctccataaccaatagccaatgaaaattgtttttacatcttc 42273738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 32017700 - 32017798
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||        |||||||||||| |||||||||||||||||||||||||||||    
T  32017700 ttattctcataaaattaaatgcaaattacattcaactttctctctctttc-gtttttccataaccaatagacaatgaaaattgtttttacatcttcctat 32017798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 38130281 - 38130182
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||       |||||||||||||||||||||||| ||||||||| |||||||    
T  38130281 ttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctat 38130182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 38280843 - 38280942
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||       ||||| ||||| |||||||||||||||||||||| |||||||    
T  38280843 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctat 38280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 12730268 - 12730204
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  12730268 aatataagcaagaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 12730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 20039100 - 20039197
Alignment:
Q  101 attctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||       ||||||||||||||||| ||||||| ||||||||||||||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctat 20039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 42273529 - 42273593
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42273529 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 42273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 9957581 - 9957488
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||       |||||||||||||||||||||||||||||||||||||||    
T  9957581 ttattctcataaaattaaatgcaaattacattcaactttctct--ctttcatttttt-cataaccaatagccaatgaaaattgtttttacatcttcc 9957488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25840743 - 25840806
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25840743 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaatgacaaacttttat 25840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 20643894 - 20643960
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  20643894 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatctt 20643960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 34425327 - 34425425
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| |       ||||| |||||||||||||||||||||||||||| |||||||    
T  34425327 ttattctcataaaattaaatgcaaattatattcaattttctctctctttta-tttttccataatcaatagccaatgaaaattgtttttacatattcctat 34425425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 8225343 - 8225407
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8225343 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 8225407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 12793088 - 12793024
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  12793088 aatataagcaagaaaaactcattttctttgttccaaaatataagcaaaaaatacaaacttttatc 12793024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 4463356 - 4463452
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||| |||||||       ||||||||||||||| |||||||||||||||||||||||    
T  4463356 ttatactcatgaaattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcc 4463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39505513 - 39505450
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  39505513 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 39505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 9957685 - 9957631
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9957685 aaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 9957631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 19413138 - 19413233
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||| ||||||||||||||||||||| ||||||| || ||||| |       |||||||||| ||||||||||||||||||||||||||||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcc 19413233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 25840860 - 25840956
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |       ||||| |||| | ||||||||||||||||||||||||||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcc 25840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 17351384 - 17351478
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| |||||||||| ||||||||||||||||||||| | | |||       ||||| ||||||||||| |||||||||||||||||||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctt 17351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 8225459 - 8225557
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaa-attgtttttacatcttccta 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||       |||||||||||||||||||||  || ||||||||| ||||||    
T  8225459 ttattctcataaaattaaatgcaaattacgttcaattttctc--tctttcattttttccataaccaatagccaatgaaattttttttttacattttccta 8225556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 20038982 - 20039046
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| |||||| ||||||||| ||||||||||||| |||||||||||||||    
T  20038982 aatataagcaaaaaaaactcattttttttgtcccacaatataagcaaaacagacaaacttttatc 20039046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 39505397 - 39505304
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |       |||||| ||| ||||||||||||||||||||||||||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctctttta-tttttccataacgaattgccaatgaaaattgtttttacatctt 39505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 34425212 - 34425274
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  34425212 atataagcaa-aaacactcattttctttgtcctaaaatataagcaaaaaagacaaacttttatc 34425274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 35462979 - 35462916
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  35462979 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 35462916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 12730145 - 12730103
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12730145 ttattctcataaaattaaatgcaaattacattcaattttctct 12730103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 43454484 - 43454389
Alignment:
Q  103 tctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||| |       | ||||||||||  |||||||||||||||||||| |||||||    
T  43454484 tctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctat 43454389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 16286344 - 16286281
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||  ||| | ||||||||||||| ||||||||||| |||||||||||||||||||    
T  16286344 aatataagcaaacaaatctcattttctttgtctcaaaatataagtaaaaaagacaaacttttat 16286281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 32433554 - 32433616
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||||| ||||||    
T  32433554 aatataagcaa-aaaaactcatattctttgtctcaaaatataagcaaaaaagacaaatttttat 32433616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 7071130 - 7071184
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    |||||| || ||||||||| ||||||||||||| |||||||||||||||||||||    
T  7071130 aaaaactcactttctttgtaccaaaatataagcgaaaaagacaaacttttatctt 7071184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 42104408 - 42104317
Alignment:
Q  104 ctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||| |||||||||||||| ||||||||||||| ||  |||| ||       |||||  ||||||||||||||||||||||||||||||||    
T  42104408 ctcatgaaattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcc 42104317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 104386 - 104345
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctct 104345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 12792966 - 12792929
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattt 136  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12792966 ttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 17351272 - 17351325
Alignment:
Q  25 aaaaacacattttctttgtcccaaaata-taagcaaaaaagacaaacttttatc 77  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  17351272 aaaaactcattttctttgtcccaaaattgtaagcaaaaaagacaaacttttatc 17351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 10154083 - 10153994
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||||||| || | |||||||        || ||||||| ||||||||||||||||||||||||||||||    
T  10154083 aaaattaaatgcaaagtgcattcaatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctat 10153994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 12912449 - 12912360
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||| ||||| |||| |||||||        | |||||||| ||||||||||||||||||||||||||||||    
T  12912449 aaaattaaatgcaaagtgcatttaatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctat 12912360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 16153595 - 16153543
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||| |||||||||||  ||||||||||||||||||||||||||    
T  16153595 aaaaactcattttgtttgtcccaaatgataagcaaaaaagacaaacttttatc 16153543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 25962694 - 25962650
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  25962694 cattttctttgtctcaaaatataagcaaaaaatacaaacttttat 25962650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 104480 - 104437
Alignment:
Q  34 ttttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  104480 ttttctctgtcccaaaatataagtaaaaaagacaaacttttatc 104437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 8146274 - 8146211
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| |||||||||  |||||||||||||||||||| |||||||||    
T  8146274 aatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttat 8146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 20914757 - 20914820
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||  |||||||||||||  ||||||||||||||||| || |||||||||    
T  20914757 aatataagcaaaaaaaattcattttctttgtcttaaaatataagcaaaaaataccaacttttat 20914820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 42364937 - 42365000
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| | || | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  42364937 aatataagcaaaagaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 42365000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 5984280 - 5984230
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| |||||||    
T  5984280 ttattctcataaaattaaatgtaaattacattaaatattctctctctttca 5984230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 28906970 - 28907031
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||| ||||||| |||||||||||||||| |||| |||||    
T  28906970 tataagcaa-aaaaactcattttctttatcccaaattataagcaaaaaagaccaactgttatc 28907031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 28943365 - 28943426
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||| ||||||| |||||||||||||||| |||| |||||    
T  28943365 tataagcaa-aaaaactcattttctttatcccaaattataagcaaaaaagaccaactgttatc 28943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 2002381 - 2002320
Alignment:
Q  16 ataagcaagaaaaacacattttctttgtcccaaaatataagcaa-aaaagacaaacttttat 76  Q
    |||||||| |||| | || ||||||||||||||||||||||||| |||| ||||||||||||    
T  2002381 ataagcaaaaaaatctcactttctttgtcccaaaatataagcaaaaaaatacaaacttttat 2002320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 24439472 - 24439533
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||   ||||||||||||| ||||||||||||||||||||  |||||||||    
T  24439472 tataagcaaaaaaatttcattttctttgtcgcaaaatataagcaaaaaagatcaacttttat 24439533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 32017585 - 32017649
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  32017585 aatataagcaaaaaaaaactcatttt-tttgtcccaaaatacaagcaaaaacgacaaacttttatc 32017649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 32110901 - 32110946
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||||    
T  32110901 cattttctttatcctaaaatataagcaaaaaagacaaacatttatc 32110946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 5369137 - 5369097
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  5369137 ataaccaacaaccaatgaaaattgtttttacatcttcctat 5369097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 38130378 - 38130334
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||    
T  38130378 cattttctttgtcccaaaatataagtaaaaaagataaatttttat 38130334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4463224 - 4463267
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataag 56  Q
    ||||||||||| || ||| |||||||||||||||||||||||||    
T  4463224 aatataagcaaaaagaactcattttctttgtcccaaaatataag 4463267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 7071234 - 7071273
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttc 138  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttc 7071273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 8143844 - 8143895
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||| |||||||| ||||||||| |||||||||||||||||  |||||||||    
T  8143844 aaaatcacattttttttgtcccataatataagcaaaaaagatcaacttttat 8143895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 13146627 - 13146690
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||  |||||||||| |||||||||| |||||||||    
T  13146627 aatataagcaaaaaaatctcatattctttgtatcaaaatataaacaaaaaagaccaacttttat 13146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 30086809 - 30086746
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | | | ||||||||| ||||||||||| ||||||||| |||||||||    
T  30086809 aatataagcaaaaaaatctcgtattctttgtctcaaaatataagtaaaaaagaccaacttttat 30086746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 31690881 - 31690818
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| || |||||| |||||||||| |||||||||| |||||||||    
T  31690881 aatataagcaaaaaaatctcatattttttgtctcaaaatataaacaaaaaagaccaacttttat 31690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 32079418 - 32079465
Alignment:
Q  27 aaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    |||| |||||||||||| ||||| ||||||||||||||| ||||||||    
T  32079418 aaactcattttctttgttccaaattataagcaaaaaagataaactttt 32079465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 5081844 - 5081894
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| ||||   |||||| |||||||||||||||||||||||||    
T  5081844 aatataagcaaaaaaaggccattttttttgtcccaaaatataagcaaaaaa 5081894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 23233395 - 23233429
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaa 133  Q
    |||||||||||||| ||||||||||||||||||||    
T  23233395 ttattctcataaaaataaatgcaaattacattcaa 23233429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 104321 - 104280
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  104321 cataactaatagctaatgaaaattgtttttacatctttctat 104280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 6391795 - 6391832
Alignment:
Q  40 ttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  6391795 ttgtcccaaattataagcaaaaaagactaacttttatc 6391832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 12729981 - 12729941
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  12729981 cataaccaatagccaatgaaaattgtctttac-tcttcctat 12729941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 12792883 - 12792843
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  12792883 cataaccaatagccaatgaaaattgtctttac-tcttcctat 12792843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 38280748 - 38280789
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| ||||||||||  ||||||||||||||||||||    
T  38280748 ttctttgtctcaaaatataaataaaaaagacaaacttttatc 38280789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 1144738 - 1144694
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  1144738 attttttttgtcctaaattataagcaaaaaagaccaacttttatc 1144694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 1238522 - 1238562
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttct 139  Q
    ||||||| |||||||||||  ||||||||||||||||||||    
T  1238522 ttattcttataaaattaaaaacaaattacattcaattttct 1238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 5984214 - 5984182
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacat 190  Q
    ||||||||||| |||||||||||||||||||||    
T  5984214 ataaccaatagtcaatgaaaattgtttttacat 5984182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 8959559 - 8959603
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  8959559 attttctttatcctaaattataagcaaaaaagaccaacttttatc 8959603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 8959707 - 8959735
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  8959707 caatgaaaattgtttttacatcttcctat 8959735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 136
Target Start/End: Complemental strand, 17825354 - 17825326
Alignment:
Q  108 taaaattaaatgcaaattacattcaattt 136  Q
    |||||||||||||||||||||||||||||    
T  17825354 taaaattaaatgcaaattacattcaattt 17825326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 29307431 - 29307387
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||  |||| |||||||||||||||| ||||||||||    
T  29307431 attttctttgtttcaaattataagcaaaaaagactaacttttatc 29307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 9e-61; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 14332668 - 14332853
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  14332668 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaa 14332767  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||| |||||| ||||||||||||||||||||||||    
T  14332768 ttaaatgcaaattacattcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctat 14332853  T

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Target: chr4; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 47867788 - 47867972
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||          |||||||||||||||    
T  47867788 aatataagcaaaaaaaatacattttctttgtcccaaaatataagcaaaaaagaaaaacttttatctttttcaagattttttttt-gttattctcataaaa 47867886  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  47867887 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 47867972  T

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Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 2229155 - 2229340
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |          |||||||||||||     
T  2229155 aatataagcaaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaatattttttttt-gttattctcataat 2229253  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||| |||||||||       ||||||||||||||||| ||||||||||||||||||||||||    
T  2229254 attaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 2229340  T

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Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 20281502 - 20281684
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||           ||||||||||||||    
T  20281502 aatataagaaaaaaaaacacattttctttgttccaaaatataagcaaaaaagaca--cttttatcttttccaagattttttttgt-ttattctcataaaa 20281598  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  20281599 ttaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 20281684  T

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Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 56318313 - 56318129
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |           ||||| ||||||||    
T  56318313 aatataagcaaaaaaaacacatttt-tttgtcccaaaatataagcaaaaaagacatacttttatcttttccaatatttttttttgtttattatcataaaa 56318215  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||| ||||||||||||||||||||| |||||||       ||||||||||||| ||||||||||||||||||||||||||||    
T  56318214 ttaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcctat 56318129  T

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Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 26916235 - 26916418
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||           ||||||||||||||    
T  26916235 aatataagcaa-aaaaacacattttctttgtctcaaaatataagcaaaaaagataaacttttatccttttcaagattttttttgt-ttattctcataaaa 26916332  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||| | |||||||||       ||||||||||||||||| ||||||||||||||||||||||||    
T  26916333 ttaaatgcaaattacattcaattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 26916418  T

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Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 41414851 - 41414670
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||           ||||||| ||||||    
T  41414851 aatataagcaaaaaaaa-acattttctttgtcccaaaatataagtaaaaaagacaaacttttatctttttcaagatttttttgt--ttattcttataaaa 41414755  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||| ||| |||||||       ||||| ||||||||||| ||||||||||||||||||||||||    
T  41414754 ttaaatgcaaattacattcaattttttctctctttca-ttttttcataatcaatagccaataaaaattgtttttacatcttcctat 41414670  T

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Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 28669231 - 28669060
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||           |||||||||||||||||||| |||||    
T  28669231 aaaaacacattttctttgtcccaaaatataagcaaaaaggacaaatttttatctttttcaagattttttttgt-ttattctcataaaattaaatacaaat 28669133  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||| |||||||       |||||| |||| |||||||||||||||||||||| |||||||    
T  28669132 tacattcaattttctctctctttca-ttttttcataactaataaccaatgaaaattgtttttacattttcctat 28669060  T

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Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 29203500 - 29203599
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  29203500 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 29203599  T

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Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 7654535 - 7654710
Alignment:
Q  13 aatataagcaagaaaa-acacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||          ||||||||||||      
T  7654535 aatataagcaaaaaaaaacacattttctttatcctaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttttgttattctcata-- 7654632  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
             |||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||    
T  7654633 ---------aaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctat 7654710  T

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Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 4058709 - 4058808
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||       ||||||||||| ||||||||||||||||||||||||||||||    
T  4058709 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctat 4058808  T

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Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 20716174 - 20716273
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  20716174 ttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 20716273  T

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Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 10069691 - 10069790
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  10069691 ttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctat 10069790  T

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Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 17794699 - 17794600
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||       ||||| ||||||||||||||||||||||||||||||||||||    
T  17794699 ttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctat 17794600  T

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Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 55580663 - 55580763
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||    
T  55580663 ttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttccta 55580762  T
Q  198 t 198  Q
    |    
T  55580763 t 55580763  T

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Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 5483436 - 5483337
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||| ||       |||||||| |||||||||||||||||||||||||||||||||    
T  5483436 ttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctat 5483337  T

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Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 17187056 - 17186992
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17187056 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 17186992  T

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Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 39078151 - 39078246
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||        ||||| |||||||||||||||||||||||||||||||    
T  39078151 ttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc 39078246  T

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Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 35310900 - 35310806
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||| ||       |||||||||||||||||||||||||||||||||||||    
T  35310900 ttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctt 35310806  T

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Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 35529551 - 35529612
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35529551 tataagcaaaaaaaacgcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 35529612  T

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Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 35529666 - 35529760
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| |||||||       ||||||||||| |||||||||||||||||||||||||    
T  35529666 ttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctt 35529760  T

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Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 39078035 - 39078099
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  39078035 aatataagcaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 39078099  T

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Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 52535743 - 52535654
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttac 188  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||        ||||||||||||||||||||||| |||||||    
T  52535743 ttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

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Target: chr4; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 16605109 - 16605046
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16605109 aatataagctaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 16605046  T

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Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 42915407 - 42915470
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42915407 aatataagcaaaaaaaactaattttctttgtcccaaaatataagcaaaaaagacaaacttttat 42915470  T

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Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 1585505 - 1585411
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||| ||       ||||| ||||||||||| ||||||||||| |||||||    
T  1585505 ttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctt 1585411  T

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Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 24940365 - 24940454
Alignment:
Q  105 tcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||       ||||||||||| |||| |||||||||||||||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttc 24940454  T

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Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 48793784 - 48793690
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |       |||||||||| ||||||||||||||||||||||||||||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctct--cttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcc 48793690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 32012554 - 32012491
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||    
T  32012554 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttat 32012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 48793900 - 48793837
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  48793900 aatataagtaaaaaaaactcattttctttgtcccaaaatataagcataaaagacaaacttttat 48793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 55580544 - 55580607
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaactttta 75  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  55580544 aatataagcaaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaactttta 55580607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 42915523 - 42915618
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |        |||||||||| ||||||||||||||||||||||||||    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctt 42915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 30012178 - 30012117
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  30012178 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttat 30012117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 47516444 - 47516383
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47516444 tataagcaaaaaacacacattttctttgtcccaaattataagcaaaaaagaccaacttttat 47516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 16604982 - 16604905
Alignment:
Q  121 aaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| |||||||       |||||| |||||||||||||||||||||| ||||||||||||    
T  16604982 aaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctat 16604905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29180639 - 29180576
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||||||||||||||||||||||    
T  29180639 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagacaaacttttat 29180576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 35311017 - 35310954
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||| || |||||||||||||  ||||||||||||||||||||||||||||||    
T  35311017 aatataagcaaaaaatactcattttctttgtcttaaaatataagcaaaaaagacaaacttttat 35310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 50768338 - 50768401
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  50768338 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 50768401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 25297380 - 25297286
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| |||||||||| ||||||||||||||||||  | ||||  |       ||||| |||||||||||||||||||||||||||||||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatctt 25297286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 4058592 - 4058656
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| | | || || ||||||||||| |||||||||||||||||||||||||||||||    
T  4058592 aatataagcaaaatatactcactttctttgtcctaaaatataagcaaaaaagacaaacttttatc 4058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 12002905 - 12002846
Alignment:
Q  17 taagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||| |||||| || |||||||||||| |||| ||||||||||||||||||||||||    
T  12002905 taagcaaaaaaaactcactttctttgtccctaaatgtaagcaaaaaagacaaacttttat 12002846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 55937930 - 55937867
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | |||||||||||||  |||||||||||||||||||| |||||||||    
T  55937930 aatataagcaaaaaaatctcattttctttgtcttaaaatataagcaaaaaagaccaacttttat 55937867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 8013341 - 8013280
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  8013341 tataagcaa-aaaaactcattttctttgtcccaaattataagtaaaaaagaccaacttttatc 8013280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 29203414 - 29203451
Alignment:
Q  42 gtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29203414 gtcccaaaatataagcaaaaaagacaaacttttatctt 29203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 10069575 - 10069638
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| ||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||||    
T  10069575 aatataaacaaaaaaaacttatttt-tttgtcccaaaatataagcaaaaaagaaaaacttttatc 10069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 46070774 - 46070726
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||    
T  46070774 tataagcaaaaaaaacccattttctttgtcccaaattataagcaaaaaa 46070726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 52535861 - 52535809
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaaga 65  Q
    ||||||||||| |||||  ||||||| ||||||||||||||||||||||||||    
T  52535861 aatataagcaaaaaaaattcattttcattgtcccaaaatataagcaaaaaaga 52535809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 8683462 - 8683373
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacat 190  Q
    |||||||||| ||||||||| ||||||||||| |||||||||  ||||| |       |||||||||| ||||||||||||| |||||||||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctc--tcttttattttttccataaccaattgccaatgaaaattatttttacat 8683373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 30776711 - 30776648
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| || |||||| ||||||||||||||||||||| |||||||||    
T  30776711 aatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttat 30776648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 30777380 - 30777443
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| || |||||| ||||||||||||||||||||| |||||||||    
T  30777380 aatataagcaaaaaaatctcatattatttgtctcaaaatataagcaaaaaagaccaacttttat 30777443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39970216 - 39970153
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  39970216 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttat 39970153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 50080609 - 50080521
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttttta 187  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||| ||       ||||| ||||||||||| ||||||| |||||    
T  50080609 ttattcgcatgaaattaaatgcaaattacattcaattttcactctcttccattttatccataatcaatagccaataaaaattggtttta 50080521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 28318662 - 28318608
Alignment:
Q  23 agaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||| |||||||||||||||||| | ||||||||||| || ||||||||||    
T  28318662 agaaaaactcattttctttgtcccaaattgtaagcaaaaaaaactaacttttatc 28318608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 37911784 - 37911845
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||||||||| |||||| ||||||||| || |||||||    
T  37911784 tataagcaa-aaaaactcattttctttgtcccaaattataagtaaaaaagactaaattttatc 37911845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 53848366 - 53848428
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||| ||| |||||||||||||| |||||| ||||||||| ||||||||||    
T  53848366 tataagaaaaaaaaactcatcttctttgtcccaaattataagtaaaaaagaccaacttttatc 53848428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 5222523 - 5222462
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| || |||| | |||||||||||||| |||||||||| ||||||||| |||||||||    
T  5222523 tataagtaaaaaaatctcattttctttgtcctaaaatataagtaaaaaagaccaacttttat 5222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 17186895 - 17186854
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  17186895 cataaccaatagccaatgaaacttatttttacatcttcctat 17186854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 32280145 - 32280104
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctc 140  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  32280145 ttattctcatgaaactaaatgcaaattacattcaattttctc 32280104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 46070668 - 46070581
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||||||| ||||  ||||||        |||||||| | ||||||||||||||||||||||||||||||    
T  46070668 aaaattaaatgcaaagtgcattcaatttactct--ctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctat 46070581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 5841878 - 5841838
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  5841878 ataaccaataaccaatgaaaattatttttacatcttcctat 5841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 14583723 - 14583759
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatt 135  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaatt 14583759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 38940781 - 38940825
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||| |||||||||||||||||| || |||||||||    
T  38940781 cattttctttgtctcaaaatataagcaaaaaataccaacttttat 38940825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 49901919 - 49901983
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagc-aaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  49901919 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaaacaaacttttat 49901983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 19351721 - 19351780
Alignment:
Q  17 taagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||| |||||| ||  |||||| ||||||||| |||| |||||||||||||||||||    
T  19351721 taagcaaaaaaaactcaccttctttatcccaaaatgtaagaaaaaaagacaaacttttat 19351780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 29899608 - 29899671
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | |||||| |||||  ||| ||||||||||||||||| |||||||||    
T  29899608 aatataagcaaaaaaatctcattttgtttgtttcaacatataagcaaaaaagaccaacttttat 29899671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37788344 - 37788407
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   |||||||||| || ||||||||||| ||||||||| |||||||||    
T  37788344 aatataagcaaaaaaatatcattttctttatctcaaaatataagtaaaaaagaccaacttttat 37788407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 52712956 - 52713019
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||| ||||||||| || ||||||    
T  52712956 aatataagcaaaaaaatctcatattctttgtctcaaaatataagtaaaaaagaccaatttttat 52713019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 4512954 - 4512992
Alignment:
Q  39 tttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  4512954 tttgtcccaaattataagcaaaaaagaccaacttttatc 4512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 17799234 - 17799196
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  17799234 cataacaaataaccaatgaaaattgtttttacatcttcc 17799196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 24521191 - 24521241
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| ||||   |||||| |||||||||||||||||||||||||    
T  24521191 aatataagcaaaaaaagaccattttttttgtcccaaaatataagcaaaaaa 24521241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 50145731 - 50145826
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||| |||| ||||||||||  ||||||||| ||||||| || |||| ||       ||| | |||||||||||||||||||| ||||||||||||    
T  50145731 tattttcatgaaattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcc 50145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 21722824 - 21722783
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctc 140  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  21722824 ttattctcatgaaattaaatacaaattacatttaattttctc 21722783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 23978203 - 23978174
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  23978203 ccaatgaaaattgtttttacatcttcctat 23978174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 28318505 - 28318476
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  28318505 ccaatgaaaattgtttttacatcttcctat 28318476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 49080321 - 49080350
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  49080321 ccaatgaaaattgtttttacatcttcctat 49080350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 76
Target Start/End: Complemental strand, 8683543 - 8683515
Alignment:
Q  48 aaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||||||||||||||||||||    
T  8683543 aaatataagcaaaaaagacaaacttttat 8683515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 12002740 - 12002704
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatctt 193  Q
    |||||||||| |||||| |||||||||||||||||||    
T  12002740 cataaccaatggccaataaaaattgtttttacatctt 12002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 29511355 - 29511406
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||    
T  29511355 aaaaacatattttctttgttc-aaattataagcaaaaaatacaaacttttatc 29511406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 29511490 - 29511518
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  29511490 caatgaaaattgtttttacatcttcctat 29511518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 47516290 - 47516250
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| | |||||||||||||||||||| |||||||||    
T  47516290 ataaccaacaaccaatgaaaattgtttttacttcttcctat 47516250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 47806791 - 47806843
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaaga 65  Q
    |||||||| || |||||  ||| ||||||||| ||||||||||||||||||||    
T  47806791 aatataagtaaaaaaaattcatattctttgtctcaaaatataagcaaaaaaga 47806843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 49080172 - 49080216
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| ||||||||| |||||||||||||||  ||||||||||    
T  49080172 attttctctgtcccaaattataagcaaaaaagatcaacttttatc 49080216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 50080722 - 50080678
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaa 69  Q
    |||||| || ||||||| ||||||||| |||||||||||||||||    
T  50080722 aaaaactcactttctttatcccaaaatgtaagcaaaaaagacaaa 50080678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 50145646 - 50145697
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||| |||||||||||| |||||| | |||||||||||    
T  50145646 aaaaactcattttctttgttccaaaatataaggaaaaaa-aaaaacttttatc 50145697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 53677683 - 53677643
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||||||||||||||||| || |||||||||    
T  53677683 ttctttgtctcaaaatataagcaaaaaaaaccaacttttat 53677643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 9e-61; HSPs: 119)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 32624256 - 32624071
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  32624256 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaa 32624157  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||| |||||||       |||||||||| |||||||||||||||||||||||||||||||    
T  32624156 ttaaatgcaaattacattcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 32624071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 12449217 - 12449033
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  12449217 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgt-ttattctcataaaa 12449119  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||| ||||| |       |||||||||| |||||||||||||||||||||||||||||||    
T  12449118 ttaaatgcaaattacattcaattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 12449033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 39555824 - 39555652
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||    
T  39555824 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgt-ttattctcataaaattaaatgcaaat 39555726  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||| |||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  39555725 tacattcaatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 39555652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 24190382 - 24190558
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||||    
T  24190382 aatataagcaaaaaaaacacattttctttgtaccaaaatataag-aaaaaagacaaacttttatcttttccaagattttttttt-gttattctcataaaa 24190479  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatct 192  Q
    |||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  24190480 ttaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 24190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 2125960 - 2126133
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngtt-attctcataaaattaaatgcaaa 123  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  || |          ||| |||||||| ||||||||||||||    
T  2125960 aaaaacacattttctttgtcctaaaatataagtaaaaaagacaaacttttatcttttttaa-attttttttttgttcattctcattaaattaaatgcaaa 2126058  T
Q  124 ttacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  2126059 ttacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 2126133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 43667550 - 43667369
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||           ||||||||||||||    
T  43667550 aatataagaaaaaaaaacacattttctttgtctcaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttgt--ttattctcataaaa 43667453  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||| ||||||||||||||||||||  |||||||       |||||||||| ||||||||||||||||||||| |||||||||    
T  43667452 ttaaatgtaaattacattcaattttctc--tctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctat 43667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 35691302 - 35691488
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    |||||||| || ||||| ||||||||||||| |||||||||||| |||||| | ||| ||||||||||| |||||          |||||||||||||||    
T  35691302 aatataagtaaaaaaaatacattttctttgtaccaaaatataagtaaaaaaaataaatttttatctttttcaagattttttttttgttattctcataaaa 35691401  T
Q  113 ttaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||| |||||||||||||||||| |||||    
T  35691402 ttaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccctat 35691488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 42966051 - 42965881
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    ||||| ||||||| |||||||||||||| ||| ||||||||||||||||||| |||| |||||           ||||||| ||||||||||||||||||    
T  42966051 aaaaatacattttatttgtcccaaaatacaagtaaaaaagacaaacttttatttttttcaagatttttttgt--ttattcttataaaattaaatgcaaat 42965954  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  42965953 tacattcaattttctctctctttca-tttttccataaccaatagccaatgaaaattgtttttacatcttcctat 42965881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 15959805 - 15959706
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |       ||||||||||||||||||||||||||||||||||||||||||    
T  15959805 ttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 15959706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 6785452 - 6785547
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||    
T  6785452 ttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttc 6785547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 32983420 - 32983241
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||  |||  || ||| ||||||||||||||||||||||||||| |||||||||||  ||||           ||||||||||||||    
T  32983420 aatataagcaaaaaaagaacacattttttttcccaaaatataagcaaaaaagacaaatttttatcttttttaagaatttttttgt-ttattctcataaaa 32983322  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||| |||||||||||||| |||||||       |||||||||| |||||||||||||||||||||||||||    
T  32983321 ttaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttc 32983241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 47600204 - 47600105
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||       ||||| ||||||||||||||||||||||||||||||||||||    
T  47600204 ttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctat 47600105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 28120970 - 28120824
Alignment:
Q  47 aaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaattacattcaattttctctttctt 146  Q
    |||||||||| ||||||||||||||||||||||||| ||||           |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  28120970 aaaatataagtaaaaaagacaaacttttatcttttc-aagatttcttttgt-ttattcacataaaattaaatgcaaattacattcaattttctctctctt 28120873  T
Q  147 tcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||       ||||| |||||||||||||||||||||||||||||||||    
T  28120872 tcattttttccataatcaatagccaatgaaaattgtttttacatcttcc 28120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 45226134 - 45226233
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||       |||||||||||| ||||||||||||||||||| |||||||||    
T  45226134 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctat 45226233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 33369549 - 33369640
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatct 192  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||       ||||||||||||||||||||||||||||||||||||    
T  33369549 ttattctcataaaattaaatgcaaattacattcaattttctc--tctttcattttttccataaccaatagccaatgaaaattgtttttacatct 33369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 6786834 - 6786929
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||       |||||||||||||||||||||||||| |||||||||||    
T  6786834 ttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttc 6786929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 40718674 - 40718769
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||||| |||| ||||    
T  40718674 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttc 40718769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6786717 - 6786781
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6786717 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 6786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 7468128 - 7468031
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||       | ||| |||||||||||||||||||| |||||||||||||    
T  7468128 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttcct 7468031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 28016909 - 28016812
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||| |        |||||||||||||||||||||||||||||||||||||||||    
T  28016909 ttattctcataaaattaaatgcaagttacattcaattttctct--cttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctat 28016812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 15959921 - 15959855
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15959921 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaatttttatctt 15959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 47014655 - 47014557
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||       |||||||||||| ||||||||||||||||||||| |||||||    
T  47014655 ttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctat 47014557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 6787272 - 6787208
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  6787272 aatataagcaaaaaaaactcattttctttatcccaaaatataagcaaaaaagacaaacttttatc 6787208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 16854139 - 16854232
Alignment:
Q  102 ttctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||       ||||||||||||||||| ||||||||||||||| |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttcc 16854232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 13136708 - 13136619
Alignment:
Q  107 ataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||| ||||||||||||||  ||||||       |||||||||||||||||| |||||||||||||||||||||||    
T  13136708 ataaaattaaatgcaaattatattcaattttctct--ctttcattttttccataaccaatagccaatggaaattgtttttacatcttcctat 13136619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 44149113 - 44149050
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  44149113 aatataagcaaaaaaatctcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 44149050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 1820411 - 1820509
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||       ||||||||| ||| |||||| ||| |||||||||||||||||    
T  1820411 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcctat 1820509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 2246179 - 2246080
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||       || ||| ||||||||||||||||| ||||||||| |||||||    
T  2246179 ttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctat 2246080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 39932737 - 39932642
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| |       ||| ||||||||||||| ||||||||||||| ||||||    
T  39932737 ttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttc 39932642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 3875186 - 3875083
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataacca----atagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||       ||||||||    ||||||||| |||||||||||||||| |||    
T  3875186 ttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattc 3875087  T
Q  195 ctat 198  Q
    ||||    
T  3875086 ctat 3875083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 7468235 - 7468170
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  7468235 aatataagcaaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 7468170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 3076291 - 3076387
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| ||||||||||  |||| |       |||||||||| ||||||||||||| ||||||||||||||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcc 3076387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 24728792 - 24728696
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||| | ||||||||||||||||||||| |||||||||| ||||| |       ||||| |||| ||||||||||||||||||||||||||||    
T  24728792 ttattctcgtgaaattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcc 24728696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 46542860 - 46542923
Alignment:
Q  12 gaatataagcaagaaaaacacattttctttgtcccaaaatataagc-aaaaaagacaaactttt 74  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  46542860 gaatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaagacaaactttt 46542923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 46542980 - 46543077
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| |||| |||||||||  |||||||       || ||||||||||||||| ||||||||||| |||||||||||    
T  46542980 ttattctcataaaattaaatgcaaattgcatttaattttctc--tctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcctat 46543077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 6787154 - 6787056
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| |||||||       ||||||||||||||||| |||||| |||||||||||||||||    
T  6787154 ttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctat 6787056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 10558920 - 10558825
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||| |||||||||| |||||||||| |||||| ||| |||| ||       ||||| |||||||||||||||||||||||||||||||||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcc 10558825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 28017006 - 28016961
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28017006 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 28016961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 4672779 - 4672843
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||| |||||||    
T  4672779 aatacaagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagataaatttttatc 4672843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 50369954 - 50370056
Alignment:
Q  99 ttattctcataaaattaaatgcaaatta----cattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||||||||| |||||||    ||||||||||||||| |||||||       |||||||||||||||||  |||||||||||||||||||    
T  50369954 ttattctcataaaattaaatacaaattaattacattcaattttctctctctttcatttttt-cataaccaatagccaatagaaattgtttttacatcttc 50370052  T
Q  195 ctat 198  Q
    ||||    
T  50370053 ctat 50370056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 23392330 - 23392243
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttttta 187  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||| ||       |||||||||||| ||||||||||| ||||||    
T  23392330 ttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattattttta 23392243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 29488644 - 29488707
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  29488644 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 29488707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 33431557 - 33431654
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||  ||||||        ||||||||||||||||||||||||||||| |||| ||||||    
T  33431557 ttattctcataaaatgaaatacaaattacatttaattttctct--ctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctat 33431654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 37735548 - 37735452
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | || ||       ||||| ||||||||||| |||||||||||||| ||||||    
T  37735548 ttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcc 37735452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 16854015 - 16854065
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  16854015 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaa 16854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 46818667 - 46818568
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||| |||||||| |||| ||||||||   |||||       |||||| | |||||||||||||||||||||| ||||||||||    
T  46818667 ttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttcctat 46818568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6785335 - 6785400
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | ||||||||||||| |||||||||||||||||||| |||||||||||    
T  6785335 aatataagcaaaaaaaaactcattttctttgtcacaaaatataagcaaaaaagataaacttttatc 6785400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 5858526 - 5858437
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||||||| |||| | |||||        |||||||||||||||||||||||||||||| ||||||||||    
T  5858526 aaaattaaatgcaaagtgcattcaatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctat 5858437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 11240925 - 11240989
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||| || ||||||||||||||| |||||||||||||| |||| |||||||||    
T  11240925 aatataagcaaaaaaatcatattttctttgtcccagaatataagcaaaaaggacacacttttatc 11240989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 47600321 - 47600257
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| |||||||||||||| ||| |||||| |||||||||||| |||||||    
T  47600321 aatataagcaaaaaaaactcattttctttgtccgaaagtataagtaaaaaagacaaatttttatc 47600257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 5858632 - 5858569
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaa-aaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  5858632 tataagcaaaaaaaactcattttctttatcccaaattataagcaaaaaaagacaaacttttatc 5858569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 9127939 - 9128002
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  9127939 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 9128002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26907353 - 26907290
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  26907353 aatataagcaaaaaaatctcattttctttgtctcaaaatataagtaaaaaagaccaacttttat 26907290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 33369434 - 33369497
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| || |||||| |||||||||||||| | |||||||||||||||||||| ||||||||    
T  33369434 atataagtaaaaaaaactcattttctttgtcctagaatataagcaaaaaagacaagcttttatc 33369497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 38942705 - 38942642
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  38942705 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 38942642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 40935877 - 40935814
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  40935877 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 40935814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 40960738 - 40960675
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  40960738 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 40960675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 44875075 - 44875138
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  44875075 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 44875138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 46949217 - 46949280
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  46949217 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 46949280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 47026375 - 47026438
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||| |||||  |||||||||||| | |||||||||| ||||||||||||||||||||    
T  47026375 atataagcaaaaaaaattcattttctttgttctaaaatataagtaaaaaagacaaacttttatc 47026438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 47303071 - 47302972
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttct-ctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||| |||||       ||||| ||||||||||||||||||  |||||||||||||||    
T  47303071 ttattctcatgaaattaaatgcaaattacattcagttttctattttttttcattttctacataatcaatagccaatgaaaatt-attttacatcttccta 47302973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 49924315 - 49924378
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  49924315 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 49924378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 7876091 - 7876008
Alignment:
Q  115 aaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| ||||| |       |||||||||||| |||| |||||| |||||||||||| ||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctat 7876008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 25391680 - 25391718
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatttt 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25391680 ttattctcataaaattaaatgcaaattacattcaatttt 25391718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 41063642 - 41063704
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||| ||||||||||| |||||| ||||||||| ||||||||||    
T  41063642 tataagcaaaaaaaactcattttatttgtcccaaattataagaaaaaaagaccaacttttatc 41063704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 43765290 - 43765389
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||  |||||| |||||||||| |||||||||||| | |||| ||       |||||| |||| |||||||||| |||||||||||||||||||    
T  43765290 ttattctcacgaaattagatgcaaattaaattcaattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctat 43765389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 3861858 - 3861766
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    ||||||| |||||||||||||||||||| ||| |||||| |||  ||||||       ||||| |||||||||||||||||||||||||||||||    
T  3861858 ttattcttataaaattaaatgcaaattatatttaatttt-tctc-ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctt 3861766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 11241081 - 11241122
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  11241081 cataaccaatagccaatgaaaattggttttacatcttcctat 11241122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 44148997 - 44148905
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||  |       |||||||||| ||||||||||||||||||||||||||||    
T  44148997 ttattctcatgaaattaaatgcaaattacgtttaattttctct--ctt--attttttccataaccaattgccaatgaaaattgtttttacatcttcc 44148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 298936 - 298884
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  298936 aaaaactcattttctttgtctcaaaatgtaagcaaaaaagacaaagttttatc 298884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 1820307 - 1820359
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  1820307 aaaaactcattttctttatcctaaaatataagtaaaaaagacaaacttttatc 1820359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 50012587 - 50012627
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttct 139  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  50012587 ttattcttataaaattaaatgcaaattacattcaattttct 50012627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 15285700 - 15285763
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  15285700 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttat 15285763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 23874091 - 23874028
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  23874091 aatataagcaaaaaaatctcatattctttgtctcaaaatatacgcaaaaaagaccaacttttat 23874028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25990645 - 25990707
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  25990645 aatataagcaa-aaaaactcatattctttgtctcaaaatataagcaaaaaagaccaatttttat 25990707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40219953 - 40220016
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  40219953 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagactaatttttat 40220016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 45358140 - 45358077
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| |  |||||||||||| |||||||||||||||||| || |||||||||    
T  45358140 aatataagcaaaaaaatctaattttctttgtctcaaaatataagcaaaaaaaaccaacttttat 45358077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 50665137 - 50665180
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataag 56  Q
    ||||||||||| |||||| |||||||||||||||||||||||||    
T  50665137 aatataagcaaaaaaaactcattttctttgtcccaaaatataag 50665180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 5950344 - 5950402
Alignment:
Q  19 agcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||| |||||| |||||||||||||||| | || |||||||||||||||| |||||||    
T  5950344 agcaaaaaaaactcattttctttgtcccagattacaagcaaaaaagacaaatttttatc 5950402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 7397608 - 7397670
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||  |||||||||||||||||| |||||||||||||| | ||||||||||    
T  7397608 tataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagcctaacttttatc 7397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 11241039 - 11241077
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatttt 137  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  11241039 ttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 16661417 - 16661478
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||| ||||||| |||||||||||||||| |||| |||||    
T  16661417 tataagcaa-aaaaactcattttctttatcccaaattataagcaaaaaagaccaactgttatc 16661478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 32318667 - 32318629
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32318667 cataaccaataaccaatgaaaattgtttttacatcttcc 32318629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 50665259 - 50665309
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    |||||||||| ||||||| ||||||||||||| |||||||||| |||||||    
T  50665259 ttattctcatgaaattaattgcaaattacatttaattttctctctctttca 50665309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 5950494 - 5950534
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  5950494 ataaccaatgaccaatgaaaattgtttttacatcttcctat 5950534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 7397712 - 7397801
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||||||| |||||| |||||        |||| |||   ||||||||||||||||||||||||||||||    
T  7397712 aaaattaaatgcaaagtgcattcaatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctat 7397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 16688191 - 16688231
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  16688191 ataaccaacaaccaatgaaaattgtttttacatcttcctat 16688231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 35189119 - 35189159
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  35189119 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 35189159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 50369860 - 50369912
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| | |||||||||||| |||||||||||||||||||||  ||||||||    
T  50369860 aaaaactctttttctttgtcctaaaatataagcaaaaaagacatgcttttatc 50369912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 52984993 - 52985025
Alignment:
Q  163 caatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||||||||||||||||||||||||||    
T  52984993 caatagccaatgaaaattgtttttacatcttcc 52985025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 3076176 - 3076238
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||  ||||||||||||| |||||||||| | ||||| ||||||||||||    
T  3076176 aatataagcaa-aaaaattcattttctttgtctcaaaatataatccaaaaaaacaaacttttat 3076238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 8889798 - 8889763
Alignment:
Q  163 caatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8889798 caataaccaatgaaaattgtttttacatcttcctat 8889763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18852119 - 18852182
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||| |||||||  ||||||||    
T  18852119 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcataaaagacctacttttat 18852182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 24728907 - 24728860
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaa 61  Q
    |||||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  24728907 atataagcaaaaaaaactcattttctttgtctcaaaatataagaaaaa 24728860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 26479635 - 26479698
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||| ||||||| || |||||||||    
T  26479635 aatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaaaaccaacttttat 26479698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 28916779 - 28916716
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||| |||||| |||| | ||| || |||||| ||||||||||| |||||||||||||||||||    
T  28916779 aatacaagcaaaaaaatctcatattttttgtctcaaaatataagtaaaaaagacaaacttttat 28916716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 39026509 - 39026447
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   |||||| |||||| ||||||||||||||||||||| |||||||||    
T  39026509 aatataagcaaaaaaatttcatttt-tttgtctcaaaatataagcaaaaaagaccaacttttat 39026447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 45840298 - 45840259
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaag 64  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  45840298 aaaaactcattttctttgtcccaaattataagcaaaaaag 45840259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 1034854 - 1034892
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatttt 137  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  1034854 ttattctcatgaaattaaatgcgaattacattcaatttt 1034892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 33431459 - 33431501
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    |||||||||||| |||||||||||| |||||||||||| ||||    
T  33431459 cattttctttgttccaaaatataagtaaaaaagacaaaatttt 33431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 43765204 - 43765245
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaactttta 75  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  43765204 attttctttgtcccaaaatgtaagc-aaaaagacaaactttta 43765245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 44056543 - 44056513
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaa 63  Q
    |||||||||||||||||||||||||||||||    
T  44056543 attttctttgtcccaaaatataagcaaaaaa 44056513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 47014773 - 47014723
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||||| ||||||||||   |||||||||||||||||||    
T  47014773 aatataagcaaaaaaaactcattttctttactccaaaatataagcaaaaaa 47014723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 195
Target Start/End: Complemental strand, 298812 - 298738
Alignment:
Q  121 aaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||| ||       ||||| ||||||||||| |||||  ||||||||||||||    
T  298812 aaattacatttaattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcc 298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 13351746 - 13351775
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  13351746 ccaatgaaaattgtttttacatcttcctat 13351775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 35366446 - 35366401
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||| ||| |||||||||||||||  ||||||||||    
T  35366446 cattttctttgtccaaaattataagcaaaaaagatcaacttttatc 35366401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 44512651 - 44512602
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaag 64  Q
    ||||||||| |||||   ||||||||||||||||| ||||||||||||||    
T  44512651 tataagcaaaaaaaattaattttctttgtcccaaattataagcaaaaaag 44512602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 3875276 - 3875240
Alignment:
Q  41 tgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  3875276 tgtcccataatataagcaaaaaagacaaatttttatc 3875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 4529102 - 4529146
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| |||||| ||||||||||||||||||||  |||||||||    
T  4529102 cattttttttgtctcaaaatataagcaaaaaagatcaacttttat 4529146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 13136830 - 13136774
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaa 69  Q
    |||||||||||  ||| | | ||||||||||| ||||||||||||||||| ||||||    
T  13136830 aatataagcaaataaatctctttttctttgtcgcaaaatataagcaaaaaggacaaa 13136774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 15912265 - 15912293
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  15912265 caatgaaaattgtttttacatcttcctat 15912293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 16688058 - 16688105
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||| |||| || ||||||||||||||||| |||||||||||||    
T  16688058 tataagcaaaaaaacca-attttctttgtcccaaattataagcaaaaaa 16688105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 18036460 - 18036503
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  18036460 cattttctttgtctcaaaatataag-aaaaaagaccaacttttat 18036503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 35366309 - 35366269
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||| ||||||||||||||||||| ||||    
T  35366309 ataaccaataaccaattaaaattgtttttacatctttctat 35366269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 37538728 - 37538772
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||| ||||| |||||||||  ||||||||||    
T  37538728 attttctttgtcccaaattataaacaaaaaagatcaacttttatc 37538772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 37538864 - 37538904
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| | |||||||||||||| |||||||||||||||    
T  37538864 ataaccaacaaccaatgaaaattgtctttacatcttcctat 37538904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 43359696 - 43359736
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    ||||||||||||||| |||||||||||| |||| |||||||    
T  43359696 aaaattaaatgcaaagtacattcaatttgctctctctttca 43359736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 46804781 - 46804729
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||| ||||| || ||||||| ||| ||||||    
T  46804781 aaaaactcattttctttgtcccaaattataaacagaaaagactaacgtttatc 46804729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 51339141 - 51339097
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||| |||| |||||| ||||||||| |||||||||    
T  51339141 cattttctttgtcgcaaattataagtaaaaaagactaacttttat 51339097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 6e-59; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 3095971 - 3095785
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnn-gttattctcataaa 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  3095971 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaa 3095872  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||       ||||| ||||||||||||||||||||||||||||||||||||    
T  3095871 attaaatgcaaattacattcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 3095785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 21542329 - 21542513
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |          ||||||||||||| |    
T  21542329 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaata-tttttttttgttattctcataata 21542427  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| |||||||||       ||||||||||||||||| ||||||||||||||||||||||||    
T  21542428 ttaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctat 21542513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 35129305 - 35129120
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          ||||||||| |||||    
T  35129305 aatataagcaaaaaaaacacattttctttgtcccaaaatacaagcaaaaaagacaaacttttatcttttccaaga-tttttttttgttattctcgtaaaa 35129207  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttt-ttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||| |||||||||||||||| ||||||||||||||    
T  35129206 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctat 35129120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 11082495 - 11082311
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||          |||||||||||||||    
T  11082495 aatataagcaaaaaaaatacattttctttgtaccaaaatataagcaaaaac-acaaacttttatctttttcaagattttttttttgttattctcataaaa 11082397  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| |||||    
T  11082396 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 11082311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 34177891 - 34177707
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    |||||||| || ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||          |||||||||||||||    
T  34177891 aatataagtaaaaaaaacacattttctttgtaccaaaatataagtaaaaaacacaaacttttatcttttccaagattttttttt-gttattctcataaaa 34177793  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||||| |||||    
T  34177792 ttaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 34177707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 7275040 - 7274944
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcc 7274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 12461594 - 12461495
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||| |||||||||||||||||||| | ||||  |       ||||||||||||||||||||||||||||||||||||| ||||    
T  12461594 ttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctat 12461495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 30794357 - 30794258
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||  |       ||| |||||||||||||||||| |||||||||||||||||||    
T  30794357 ttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctat 30794258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 7275158 - 7275095
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| |||||| ||||||  ||||||||||||||||| ||||||||||||    
T  7275158 aatataagcaaaaaaaactcattttatttgtcttaaaatataagcaaaaaatacaaacttttat 7275095  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 1130428 - 1130480
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||| ||||||||||||| || ||||||||||    
T  1130428 aaaaactcattttctttgtcccaaattataagcaaaaaaaaccaacttttatc 1130480  T

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Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 10227808 - 10227871
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||  | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  10227808 aatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 10227871  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 30949051 - 30949094
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  30949051 attttctttgtctcaaaatataagcaaaaaagactaacttttat 30949094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 32882941 - 32882882
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    ||||||||| ||||   |||||||||||||| |||||||||||||||||||| |||||||    
T  32882941 tataagcaaaaaaatttcattttctttgtcctaaaatataagcaaaaaagaccaactttt 32882882  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 9428766 - 9428844
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaa 177  Q
    |||||||||||||||| ||||||||||| ||| |||||||||| ||||| |        ||||||||||||||||||||    
T  9428766 ttattctcataaaatttaatgcaaattatatttaattttctctctcttttattttttctataaccaatagccaatgaaa 9428844  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 31107187 - 31107224
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattt 136  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  31107187 ttattcttataaaattaaatgcaaattacattcaattt 31107224  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 17598208 - 17598248
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaactt 72  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  17598208 cattttttttgtcccaaaatataagcaaaaaagaccaactt 17598248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17722047 - 17722007
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  17722047 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 17722007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 5300701 - 5300666
Alignment:
Q  163 caatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5300701 caataaccaatgaaaattgtttttacatcttcctat 5300666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 5300852 - 5300805
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaa 62  Q
    ||||||||| |||||  |||||||||||||||||| ||||||||||||    
T  5300852 tataagcaaaaaaaattcattttctttgtcccaaattataagcaaaaa 5300805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 12278602 - 12278665
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||| ||||||||| ||||||||||||||||||||  |||||||||    
T  12278602 aatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagatcaacttttat 12278665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 30766342 - 30766405
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||||||||| |  |||||||||    
T  30766342 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaaaatcaacttttat 30766405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 31887383 - 31887320
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||||||||||||| |||| |||||||| ||||||| |||||||||    
T  31887383 aatataagcaaaaaaatatcattttctttgtctcaaattataagcataaaagaccaacttttat 31887320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 4987842 - 4987904
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || ||||||  ||||||||||||||||| |||||  ||||||||| ||||||||||    
T  4987842 tataagtaaaaaaaacctattttctttgtcccaaattataaataaaaaagactaacttttatc 4987904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 17751909 - 17751818
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacat 190  Q
    ||||||| || ||| |||||||||||||||||||||||| ||| |||| ||       ||||| |||||||||||||  | |||||||||||    
T  17751909 ttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacat 17751818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 16013527 - 16013498
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  16013527 ccaatgaaaattgtttttacatcttcctat 16013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 16524443 - 16524472
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  16524443 ccaatgaaaattgtttttacatcttcctat 16524472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 374018 - 374058
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| || ||||||||||||||||||||| |||||||||    
T  374018 ttctttatctcaaaatataagcaaaaaagaccaacttttat 374058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 3888336 - 3888388
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||| | | ||| |||||||||||||||| ||||||||||    
T  3888336 aaaaactcattttctttattctaaattataagcaaaaaagaccaacttttatc 3888388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 41528168 - 41528351
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||           ||||||||||||||    
T  41528168 aatataagcaa-aaaaacacattttgtttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgt-ttattctcataaaa 41528265  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  41528266 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 41528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 6110450 - 6110264
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  6110450 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgt-ttattctcataaaa 6110352  T
Q  113 ttaaatgcaaattacattcaattt--tctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||  ||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6110351 ttaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 6110264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 35517033 - 35517212
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||          |||||||||||||||    
T  35517033 aatataagcaaaaaaaacacattttcttcgtaccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttttgttattctcataaaa 35517132  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatct 192  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||    
T  35517133 ttaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatct 35517212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 28599386 - 28599213
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||           ||||||||||||||||||||||| ||    
T  28599386 aaaaacacattttctttgtcccaaaatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatat 28599287  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||    
T  28599286 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 28599213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 3201246 - 3201421
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||                 ||||||||||||||    
T  3201246 aatataagcaaaaaaaacacattttctttatcccaaaatataagcaaaaaagacaaactattatctttt----------tttttgtttattctcataaaa 3201335  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||| ||||    
T  3201336 ttaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctat 3201421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 198
Target Start/End: Original strand, 45085188 - 45085352
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaattacattca 132  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||           ||||||||||||||||||||||||||||||||||    
T  45085188 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttctaagattttttttgt-ttattctcataaaattaaatgcaaattacattca 45085286  T
Q  133 attttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||| |||||||       |||||||||| || ||||||||||||||||||||||||||||    
T  45085287 attttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctat 45085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 45660361 - 45660460
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  45660361 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 45660460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 19264095 - 19264195
Alignment:
Q  99 ttattctcataaaattaaatgcaaa-ttacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||| |       |||||||||||||||||||||||||||||||||||||||||    
T  19264095 ttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttccta 19264194  T
Q  198 t 198  Q
    |    
T  19264195 t 19264195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 28858305 - 28858404
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||| |||||||||||| ||||    
T  28858305 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctat 28858404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 33198795 - 33198696
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||       ||||||||||| ||||| ||||||||||||||||||||||||    
T  33198795 ttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctat 33198696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 19263979 - 19264045
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19263979 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 19264045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 29524205 - 29524109
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |       |||||||||| ||||||||||||||||||||||||||||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcc 29524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 40584562 - 40584466
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||       ||||||||| | |||||||||||||||||||||||||||    
T  40584562 ttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcc 40584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 11617020 - 11617119
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 33198915 - 33198851
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  33198915 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaaattttatc 33198851  T

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Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 14873958 - 14874058
Alignment:
Q  99 ttattctcataaaattaaa-tgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    ||||||||||| ||||||| ||||||||||||| |||||| ||| |||||||       |||||||||||||||||||||||| ||||||||||||||||    
T  14873958 ttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttccta 14874057  T
Q  198 t 198  Q
    |    
T  14874058 t 14874058  T

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Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 25572042 - 25572137
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||||||||||||||| |||||||||| |||| ||       ||||||||||| |||||||||||||||||||||||||||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttcca-tttttccataaccaatatccaatgaaaattgtttttacatcttcc 25572137  T

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Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 5280761 - 5280697
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| |||||||    
T  5280761 aatataagcaaaaaaaacttattttctttgtcccaaaatataagcaaaaaagacaaatttttatc 5280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 8701601 - 8701694
Alignment:
Q  102 ttctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||| ||||||||| |||||| |||| |||||||||| |||| ||       |||||||||||||||||||||||||||||||||||||||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcc 8701694  T

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Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 6766098 - 6765998
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||| ||        |||||||||||| |||| |||||||||||||||||||||||    
T  6766098 ttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttccta 6765999  T
Q  198 t 198  Q
    |    
T  6765998 t 6765998  T

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Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29524321 - 29524258
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  29524321 aatataagtaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttat 29524258  T

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Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 24204693 - 24204594
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| | |||||||| |||||| |||||||||||||| |||| ||       ||||||||||||||||||||||||| |||||||| |||||||    
T  24204693 ttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctat 24204594  T

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Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 33677479 - 33677578
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||||| ||| |||||||||||||| | ||||  |       |||||||||||| |||||||||||||||||||||||||||||    
T  33677479 ttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 33677578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 11319813 - 11319768
Alignment:
Q  303 tacattattaggaagaaatgaaaagaagaaaacacaaaagaatata 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  11319813 tacattattaggaagaaatgaaaagaagaaaacacaaaagaatata 11319768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 18834170 - 18834109
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  18834170 tataagcaaaaaaatcacattttctttgtcccaaaatataagcaaaaaagatcaacttttat 18834109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 45660241 - 45660306
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  45660241 aatataagcaaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaaacaaacttttatc 45660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 5963197 - 5963290
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatct 192  Q
    ||||||| || | |||||||||||||||||||||||||||||| |||| ||       ||||||||||||||||| |||||| |||||||||||    
T  5963197 ttattcttatgacattaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatct 5963290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25571923 - 25571987
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||||||||    
T  25571923 aatataagcaaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaaacaaacttttat 25571987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 28858189 - 28858253
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| || ||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  28858189 aatataagcaaaaataactcattttctttgtcctaaaatataagcaaaaaatacaaacttttatc 28858253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 38070907 - 38070959
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  38070907 aaaaactcattttctttgtcccaaattataagcaaaaaagacaaacttttatc 38070959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 21539653 - 21539716
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  21539653 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 21539716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 33635232 - 33635295
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  33635232 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 33635295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 12938238 - 12938337
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||||||||||||||||||||  ||| ||| ||||| |       ||||| |||||||||||||||||||||||||||  |||||||    
T  12938238 ttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcctat 12938337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 9864881 - 9864787
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| |||||||||||||||||||||||||||| ||  |||| ||       ||||| |||| ||||||||||||||||||||| ||||||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatc--tcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcc 9864787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 40808994 - 40808930
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||| ||||||    
T  40808994 aatataagcaaaaaaaaacttattttctttgtcccaaaatataagcaaaaaagacaaatttttat 40808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 792616 - 792553
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  792616 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 792553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 8701481 - 8701544
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||| |||||||||| ||  ||||||||| ||||||||||||||||||||    
T  8701481 aatataagcaaaaaaaactcattttctttatcttaaaatataaacaaaaaagacaaacttttat 8701544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18454945 - 18455008
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||||| |||||||||||||| ||||||||||||||||||| ||| ||||||    
T  18454945 aatataagaaaaaaaaactcattttctttgtcctaaaatataagcaaaaaagataaatttttat 18455008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29514279 - 29514216
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  29514279 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 29514216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 7645394 - 7645352
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  7645394 ttattctcatgaaattaaatgcaaattacattcaattttctct 7645352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 30421346 - 30421296
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  30421346 ttattcttataaaattaaatgtaaattacatttaattttctctttctttca 30421296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 28492416 - 28492479
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| |  ||||||||||||  |||||||||||||||||||| |||||||||    
T  28492416 aatataagcaaaaaaatcttattttctttgtcttaaaatataagcaaaaaagaccaacttttat 28492479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 38549903 - 38549840
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  38549903 aatataagtaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 38549840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 39696963 - 39696916
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctt 146  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||    
T  39696963 ttattctcacgaaattaaatgcaaattacatttaattttctctttctt 39696916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 9709416 - 9709477
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| ||||| ||||||||||||||||||| |||||  ||||||||| ||||||||||    
T  9709416 tataagcaaaaaaaa-acattttctttgtcccaaattataataaaaaaagactaacttttatc 9709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 14873852 - 14873890
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  14873852 aaaaactcattttctttgtcccaaaatataagcaaaaaa 14873890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 15068644 - 15068694
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaaga 65  Q
    ||||||||| |||||  ||||||||||||| ||||||||||||||||||||    
T  15068644 tataagcaaaaaaaattcattttctttgtctcaaaatataagcaaaaaaga 15068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 26998219 - 26998280
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||  |||||||||||||| ||| |||||||||||||||| ||||||||||    
T  26998219 tataagcaa-aaaaattcattttctttgtcctaaattataagcaaaaaagaccaacttttatc 26998280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 30830760 - 30830718
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||| |||||||||||||||||||| |||||||||||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctct 30830718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 44454987 - 44455025
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatttt 137  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttt 44455025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4033935 - 4033883
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaaga 65  Q
    ||||||||||| |||| |  |||||||||||| ||||||||||||||||||||    
T  4033935 aatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaaga 4033883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 14565611 - 14565571
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  14565611 ttctttgtctcaaaatataagcaaaaaagactaacttttat 14565571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 32273582 - 32273634
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || ||||||||||| ||| |||||||||||||||| ||||||||||    
T  32273582 aaaaactcaatttctttgtcctaaattataagcaaaaaagaccaacttttatc 32273634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4091906 - 4091969
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||| | ||||||||||||| |||||||||||||| ||| || |||||||||    
T  4091906 aatataagtaataaaatctcattttctttgtctcaaaatataagcaagaaaaaccaacttttat 4091969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 8784291 - 8784354
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||  | ||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  8784291 aatataagcaaaaaattctcatattctttgtctcaaaatataagtaaaaaagaccaacttttat 8784354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 10979088 - 10979150
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | |||||| |||||| |||||||| |||||||||||| |||||||||    
T  10979088 aatataagcaaaaaaatctcattttttttgtctcaaaatat-agcaaaaaagaccaacttttat 10979150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 20380041 - 20380088
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    |||||| |||| |||||| |||||||||||||||| ||||||||||||    
T  20380041 cattttgtttgacccaaattataagcaaaaaagaccaacttttatctt 20380088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 29514734 - 29514672
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  29514734 aatataagcaaaaaaatctcatattctttgtctcaaaatataag-aaaaaagaccaacttttat 29514672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 35022788 - 35022839
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| || ||||||||||| ||||| |||||||||||||||||| |||||    
T  35022788 aaaaactcactttctttgtcctaaaatgtaagcaaaaaagacaaacatttat 35022839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 10478071 - 10478121
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||| | |||||| |||||| ||||||||||||||||||    
T  10478071 aatataagcaaaaaaatctcattttttttgtctcaaaatataagcaaaaaa 10478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 11616925 - 11616967
Alignment:
Q  35 tttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||||||| |||||||| |||||||||||    
T  11616925 tttctttgtcctaaaatataagtaaaaaagataaacttttatc 11616967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32010003 - 32010065
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||  |||||||||||| ||||| |||||| ||||||||  ||||||||||    
T  32010003 tataagcaaaaaaaattcattttctttgttccaaattataagtaaaaaagatcaacttttatc 32010065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 26998383 - 26998412
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  26998383 ccaatgaaaattgtttttacatcttcctat 26998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 35022961 - 35022994
Alignment:
Q  165 atagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||||||||||||||||||||||    
T  35022961 atagcaaatgaaaattgtttttacatcttcctat 35022994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 35115910 - 35115869
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  35115910 cataaccaataacaaatgaaaattgtttttacatctttctat 35115869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 16495019 - 16494991
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  16495019 caatgaaaattgtttttacatcttcctat 16494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 28424193 - 28424233
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||||| |||||||||||||| |||||||||    
T  28424193 ttctttgtctcaaaatttaagcaaaaaagaccaacttttat 28424233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 30752029 - 30752089
Alignment:
Q  17 taagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| |||||| || ||||||| ||||||| ||||||||||| ||||||  |||||||    
T  30752029 taagcaaaaaaaactcactttctttatcccaaattataagcaaaatagacaagtttttatc 30752089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 35832331 - 35832371
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||||||||||||||||||||| | ||||||    
T  35832331 ttctttgtctcaaaatataagcaaaaaagacatatttttat 35832371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 40808823 - 40808787
Alignment:
Q  159 taaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||| || |||||||||||||||||||||||||    
T  40808823 taaccaattgctaatgaaaattgtttttacatcttcc 40808787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 198
Target Start/End: Original strand, 43415468 - 43415496
Alignment:
Q  170 caatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||    
T  43415468 caatgaaaattgtttttacatcttcctat 43415496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 823 - 639
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||          |||||||||||||||    
T  823 aatataagcaaaaaaaacacattttctttgtaccaaaatataagcaaaaaacacaaacttttatcttttccaagattttttttt-gttattctcataaaa 725  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||||||||| |||||    
T  724 ttaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 7022655 - 7022470
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||          ||||||||||||||    
T  7022655 aatataagcaaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttt-gttattctcataaa 7022557  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||| ||||||||||    
T  7022556 attaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctat 7022470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 7858437 - 7858621
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  7858437 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgt-ttattctcataaaa 7858535  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| ||||||||||||| |||||||       ||||| |||| | |||||||||||||||||||||||||||||    
T  7858536 ttaaatgcaaattactttcaattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctat 7858621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 41086637 - 41086458
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaa-aaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||           |||||||||||||    
T  41086637 aatataagcaa-aaaaacacattttctttgtcccaaaatataagcaaaaaaagacaaacttttatctttttcaagattttttttgt-ttattctcataaa 41086540  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    ||||||||||||||||||| |||||||||| | ||| |       ||| |||||||||||||||||||||||||||||||||    
T  41086539 attaaatgcaaattacattgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctt 41086458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 34890340 - 34890241
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  34890340 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 34890241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 26483454 - 26483625
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    ||||| ||||||||||||| |||||||||||| |||||| |||||||||||| |||| |||||          ||||||||| |||||||||||| ||||    
T  26483454 aaaaatacattttctttgtaccaaaatataag-aaaaaacacaaacttttatttttttcaagattttttttt-gttattctcgtaaaattaaatgtaaat 26483551  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |||||    
T  26483552 tacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctat 26483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 36190766 - 36190865
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |       ||||||||||||||||||||||||||||||||||||||||||    
T  36190766 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 36190865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 15958166 - 15957978
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngtt-attctcataaa 111  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||   |||          ||| |||||||||||    
T  15958166 aatataagaaaaaaaaacatattttctttgtcccaaaatataagcaaaaaatacaaatttttgtcttttttcagattttttttttgtttattctcataaa 15958067  T
Q  112 attaaatgcaaattacattcaattttctctttct--ttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||| |||  ||||       ||||||||||||| |||||||||||||||||| | |||||||    
T  15958066 attaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcctat 15957978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 8107783 - 8107692
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||    
T  8107783 ttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttatccataaccaatagccaatgaaaattgtttttacatc 8107692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 13143758 - 13143857
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||       || |||||| ||||||||||||||||||||||||||||||||    
T  13143758 ttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcctat 13143857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 31734109 - 31734208
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||       |||| |||||||||||||||||||||||||| ||||||||||    
T  31734109 ttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctat 31734208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 28348605 - 28348703
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||| ||||||||||||||| |||||||    
T  28348605 ttattctcataaaattaaatgcaaattacattcaattttctctctctttca-tttttccataaccaatagccaatggaaattgtttttacatattcctat 28348703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 7499720 - 7499816
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||    
T  7499720 ttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc 7499816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 8711870 - 8711970
Alignment:
Q  99 ttattctcataaaa-ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttccta 197  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| |       |||||||||||||||||||||||| ||||||||||||||||    
T  8711870 ttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttccta 8711969  T
Q  198 t 198  Q
    |    
T  8711970 t 8711970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 24892832 - 24892920
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttttta 187  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||       |||||||||||||||||||||||||||||||    
T  24892832 ttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgttttta 24892920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 34158457 - 34158358
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||         |||||||||||| |||||||||||||||||||||||||||||    
T  34158457 ttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctat 34158358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 34890456 - 34890390
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890456 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 34890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 43216513 - 43216414
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||       ||||||||||||  ||||||||||||||||||||||||||||    
T  43216513 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctat 43216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  104 ctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||       ||||||||||||||||| ||||||||||||||||||||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 35456190 - 35456091
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| |       |||||  |||||||||||||||||||||||||||||| ||||    
T  35456190 ttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctat 35456091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 24892716 - 24892780
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||| || |||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  24892716 aatataaggaaaaaaaactcattttctttgttccaaaatataagcaaaaaagacaaacttttatc 24892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 35525476 - 35525540
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35525476 aatataaggaaaaaaaactcattttctttgtcccaaaatataagtaaaaaagacaaacttttatc 35525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 4047164 - 4047113
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4047164 aaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttat 4047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 36537957 - 36538020
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||||    
T  36537957 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaacttttat 36538020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 4047060 - 4046969
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacat 190  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |       |||||||||| ||||||||||||| |||||||||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacat 4046969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 30575987 - 30575904
Alignment:
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    ||||||||||||||| || |||||||||| |||||||       |||||||||||||||||||||||||||||||||| |||||    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcct 30575904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 2052830 - 2052924
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||  |       | || ||||||||||||||||||||||||||||||||||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctc--tcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcc 2052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 13143654 - 13143706
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  13143654 aaaaactcattttctttgtcccaaaatataagcaaaaaagataaacttttatc 13143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 13144231 - 13144179
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13144231 aaaaactcattttctttgtctcaaaatataagcaaaaaagacaaacttttatc 13144179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 36190661 - 36190713
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  36190661 aaaaactcattttctttgtcccaaaatataagcaaaaaagacacacttttatc 36190713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 11043956 - 11044019
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  11043956 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 11044019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 24612742 - 24612679
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||| |||||||||    
T  24612742 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagaccaacttttat 24612679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 29920434 - 29920338
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||| | ||||||||||||||||| || ||||  |       ||||| |||||||||||||||||||||||||||||||||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcc 29920338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 5217291 - 5217353
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||| ||||| |||||||||||||||| ||||||||||    
T  5217291 tataagcaaaaaaaactcattttctttgtaccaaattataagcaaaaaagaccaacttttatc 5217353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 8709950 - 8709908
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctct 8709908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 20051499 - 20051560
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaaga 87  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||    
T  20051499 aaaaacacattttctttgtaccaaaatataag-aaaaacgacaaatttttatcttttccaaga 20051560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 30576089 - 30576045
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  30576089 attttctttgtcccaaaatataagcaaaaaagacaaatttttatc 30576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 3099851 - 3099914
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||  ||||||||||||||||||||||| |||||||    
T  3099851 aatataagcaaaaaaatctcattttctttgtttcaaaatataagcaaaaaagacaatcttttat 3099914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 16879558 - 16879462
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||| || ||||||||| |||| ||||||||||||||||| |||||||       ||||| |||||| |||| |||||||||||||||| ||||    
T  16879558 ttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcc 16879462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 25321848 - 25321785
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| |  |||||||||||| ||||||||||||||||||||| |||||||||    
T  25321848 aatataagcaaaaaaatcttattttctttgtctcaaaatataagcaaaaaagaccaacttttat 25321785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27621029 - 27621092
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||| |||||||||||||||||||||||||||    
T  27621029 aatataagcaaaaaaatctcatattctttgtctcaatatataagcaaaaaagacaaacttttat 27621092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 35259956 - 35260019
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  35259956 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 35260019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 13144127 - 13144085
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  13144127 ttattttcataaaattaaatgcaaattacattcaattttctct 13144085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 17713122 - 17713184
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  17713122 tataagtaaaaaaaactcattttctttgtcccaaattataagtaaaaaagaccaacttttatc 17713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 35525603 - 35525678
Alignment:
Q  121 aaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    |||||||||| |||||||||| ||||| |       |||||||||||| |||||||||||||||||||||||||||    
T  35525603 aaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcct 35525678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 43216637 - 43216587
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  43216637 aatataagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaa 43216587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 8673298 - 8673343
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  8673298 cattttctttgtcccaaattataagcaaaaaagaccaacttttatc 8673343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 29920534 - 29920489
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||    
T  29920534 cattttctttgtccctaaatataagcaaaaaacacaaacttttatc 29920489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 8107882 - 8107834
Alignment:
Q  32 cattttctttgtcccaaaatataagcaa-aaaagacaaacttttatctt 79  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8107882 cattttctttgtcccaaaatataagcaaaaaaagacaaatttttatctt 8107834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 38072114 - 38072158
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  38072114 attttctttgtcccaaattataagcaaaaaagaccaacttttatc 38072158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41809086 - 41809022
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||| |  ||||| |||||| |||||||||||||||||||||||||||||||    
T  41809086 aatataagcaaaaaaaaacttattttttttgtctcaaaatataagcaaaaaagacaaacttttat 41809022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27752485 - 27752548
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||||||||||||| |||||||||| |||||||||| |||||||||    
T  27752485 aatataagcaaaaaaatatcattttctttgtctcaaaatataaacaaaaaagaccaacttttat 27752548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 28348511 - 28348553
Alignment:
Q  34 ttttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  28348511 ttttctttgtcccaaaatataag-aaaaaagacaaacttttatc 28348553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 33851285 - 33851222
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||| | ||||||||||||||||||||  |||||||||    
T  33851285 aatataagcaaaaaaatctcattttctttgcctcaaaatataagcaaaaaagatcaacttttat 33851222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 41362888 - 41362846
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaactttta 75  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  41362888 attttctttgtcccaaattataagcaaaaaagaccaactttta 41362846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 44052520 - 44052582
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||| |||| | |||||||||| || |||||||||||||||||| || |||||||||    
T  44052520 atataagcaaaaaaatctcattttctttatctcaaaatataagcaaaaaaaaccaacttttat 44052582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 2238838 - 2238785
Alignment:
Q  19 agcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactt 72  Q
    ||||| |||| | |||||||||||||| |||||||||||||||||||| |||||    
T  2238838 agcaaaaaaatctcattttctttgtcctaaaatataagcaaaaaagaccaactt 2238785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 13144054 - 13144013
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  13144054 cataaccaataactaatgaaaattgtttttacatcttcctat 13144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 15824797 - 15824723
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaat 173  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||| ||       |||||||||||||||||    
T  15824797 ttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat 15824723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 24510944 - 24510883
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||| | |||||||||||||||||||||||||  |||||||| || ||||||    
T  24510944 tataagcaaaaaaatctcattttctttgtcccaaaatataagttaaaaagaccaatttttat 24510883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 41426190 - 41426235
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaa 60  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||    
T  41426190 tataagcaaaaaaatctcattttctttgtcccaaaatataagcaaa 41426235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 8711754 - 8711818
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| |||||  |||||| |||||| ||||||||||  |||||||||||| |||||||    
T  8711754 aatataagcaaaaaaaattcattttatttgtctcaaaatataaataaaaaagacaaatttttatc 8711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 17314739 - 17314791
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||| ||||| |||||||||||||||  ||||||||||    
T  17314739 aaaaactcattttctttgttccaaattataagcaaaaaagatcaacttttatc 17314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 17713276 - 17713316
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  17713276 ataaccaataaccaatgaaaattgtttttaaatcttcctat 17713316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 26954499 - 26954459
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||| | ||||||||||||||||||||||||||||||    
T  26954499 ataaccaacaaccaatgaaaattgtttttacatcttcctat 26954459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 37597992 - 37598032
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  37597992 ttctttgtctcaaaatataagcaaaaaagaccaacttttat 37598032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 31133846 - 31133783
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  31133846 aatataagcaaaaaaatttcatattctttgtctcaaaatataagaaaaaaagaccaacttttat 31133783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 32678771 - 32678708
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||||||||||||   ||||||||||||||||||| ||||||||||    
T  32678771 aatataagcaaaaaaatatcattttctttgttttaaaatataagcaaaaaagataaacttttat 32678708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 33563770 - 33563728
Alignment:
Q  35 tttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||| |||||||||||| || |||||||||||    
T  33563770 tttctttgtcccaaattataagcaaaaatgataaacttttatc 33563728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 40487935 - 40487885
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||| | ||||||||| ||| ||||||||||||||||||    
T  40487935 aatataagcaaaaaaatctcattttcttcgtctcaaaatataagcaaaaaa 40487885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 41755920 - 41755970
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    ||||| |||| |||||||||| ||||||||||||||||| ||| |||||||    
T  41755920 ttattatcatgaaattaaatgtaaattacattcaattttttctctctttca 41755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 8745647 - 8745676
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  8745647 ccaatgaaaattgtttttacatcttcctat 8745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 16358219 - 16358178
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| |||||| |||||||||||| ||||||||||||||||    
T  16358219 cataatcaatagtcaatgaaaattgattttacatcttcctat 16358178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 17336806 - 17336835
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  17336806 ccaatgaaaattgtttttacatcttcctat 17336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 25195142 - 25195113
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  25195142 ccaatgaaaattgtttttacatcttcctat 25195113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 26954636 - 26954591
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||||||| |||||| ||||||||| || |||||||    
T  26954636 cattttctttgtcccaaattataagtaaaaaagaccaaattttatc 26954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 31734003 - 31734056
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagc-aaaaaagacaaacttttatc 77  Q
    |||||| |||||| ||||||||||||||||| | |||||||| |||||||||||    
T  31734003 aaaaactcattttttttgtcccaaaatataaacaaaaaaagaaaaacttttatc 31734056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Complemental strand, 41362403 - 41362374
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  41362403 ccaatgaaaattgtttttacatcttcctat 41362374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 2628271 - 2628231
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||| ||||| |||||||||||| |||||||||||||||||    
T  2628271 ataagcaataaccaatgaaaattatttttacatcttcctat 2628231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 7499602 - 7499662
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaactt 72  Q
    ||||||||||| ||||| |  |||| |||| |||||||||||||| |||||||||||||||    
T  7499602 aatataagcaaaaaaaaactaatttcctttatcccaaaatataagtaaaaaagacaaactt 7499662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 16635357 - 16635401
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||||| |||||||||| || |||||| |||||||||    
T  16635357 cattttctttgtcctaaaatataagtaagaaagaccaacttttat 16635401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 16635493 - 16635537
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||||| |||||||||| || |||||| |||||||||    
T  16635493 cattttctttgtcctaaaatataagtaagaaagaccaacttttat 16635537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 34158561 - 34158509
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || ||| ||||| |||||||||||| |||||||| |||||||||||    
T  34158561 aaaaactcactttgtttgttccaaaatataagtaaaaaagataaacttttatc 34158509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 35344288 - 35344328
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  35344288 ttctttgtctcaaaatataagcaaaaaagaccaatttttat 35344328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 119)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 23311790 - 23311618
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||          |||||||||||||||||||||| | ||    
T  23311790 aaaaacacattttctttgtcccaaaatataagcaaaaaagtcaaacttttatctttttcaagattttttttt-gttattctcataaaattaaatgtatat 23311692  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  23311691 tacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 23311618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 25 - 198
Target Start/End: Complemental strand, 11054505 - 11054337
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||    
T  11054505 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaaga-tttttttttgttattctcataaaattaaatgcaaat 11054407  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||| ||         ||||||||||||||||||||||||||||||| ||||||||||    
T  11054406 tacattcaattttctctttcatt----ttttccataaccaatagccaatgaaaattgtttttaaatcttcctat 11054337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 37042626 - 37042442
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| | |||  ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||          |||||||||||||||    
T  37042626 aatataagcaaaagaaattcattttctttgtcccaaaatataaggaaaaaagacaaattttaatcttttccaagattttttttt-gttattctcataaaa 37042528  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||    
T  37042527 ttaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 37042442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 36546457 - 36546641
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||           ||||||||||||||    
T  36546457 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgt-ttattctcataaaa 36546555  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||| |||| ||||| |||||||        |||||||||||||||||||||||| ||||||||||||||||    
T  36546556 ttaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctat 36546641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 36561858 - 36561674
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||           ||||||||||||||    
T  36561858 aatataagcaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgt-ttattctcataaaa 36561760  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||| |||| ||||| |||||||        |||||||||||||||||||||||| ||||||||||||||||    
T  36561759 ttaaatgcaaattacattaaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctat 36561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 30189485 - 30189670
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||||||||||||||||||||||| |  |||||||| ||| |||||||||||| ||||          ||||||||| |||||    
T  30189485 aatataagcaa-aaaaacacattttctttgtcccaaaatattaataaaaaagataaatttttatcttttctaagattttttttttgttattctcgtaaaa 30189583  T
Q  113 ttaaatgcaaattacattcaattttctctttctttca-nnnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||| |||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  30189584 ttaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcctat 30189670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 47864104 - 47864290
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| || |||||||||||||||||||||||  ||||||||||||||| |||||||| |||||           |||||||||||||    
T  47864104 aatataagcaaaaaaaaacatattttctttgtcccaaaatataaataaaaaagacaaacttctatctttttcaagatttttttttgtttattctcataaa 47864203  T
Q  112 attaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||| ||| |||||||       ||||| |||||| |||||||||||||||||||||||||||||    
T  47864204 attaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctat 47864290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 14752332 - 14752233
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||| |||||||||||||||||||||||||||||    
T  14752332 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 14752233  T

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Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 103 - 198
Target Start/End: Complemental strand, 579258 - 579163
Alignment:
Q  103 tctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||       ||||||||||||||||||||||||||||||| ||||||||||    
T  579258 tctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctat 579163  T

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Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 6438083 - 6438182
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  6438083 ttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctat 6438182  T

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Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 28875406 - 28875501
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||    
T  28875406 ttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttc 28875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 50651161 - 50651062
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |       |||||||||||| |||||||||||||||||||||||||||||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 54465019 - 54464920
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||       |||||||||||||||| |||||||||||||||||||||||||    
T  54465019 ttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcctat 54464920  T

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Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 99 - 196
Target Start/End: Original strand, 6075081 - 6075178
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||| ||||||||||||||||||||| |||||||    
T  6075081 ttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcct 6075178  T

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Target: chr3; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 23910705 - 23910580
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaa 111  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||           ||||||||||| |    
T  23910705 aatataagcaaaaaaaaacacattttttttgtcccaaaatataagcaaaaaagacaaatttttatctttttcaagattttttttgt-ttattctcatata 23910607  T
Q  112 attaaatgcaaattacattcaattttc 138  Q
    |||||||||||||||||||||||||||    
T  23910606 attaaatgcaaattacattcaattttc 23910580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 14752448 - 14752382
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14752448 aatataagcaaaaaaaactcattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 14752382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 7866607 - 7866512
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||| |       |||||||||||| |||||||||||||||||||||||||    
T  7866607 ttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttc 7866512  T

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Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 35963152 - 35963251
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||||||       ||||||||||| ||||| |||||||||||| |||||||||||    
T  35963152 ttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctat 35963251  T

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Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 34722724 - 34722634
Alignment:
Q  104 ctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||||||||| |||||||||||||||||||||   |||||       ||||||||||||||||||||||||||||||||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttc 34722634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 46711781 - 46711683
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| |||||||||||||| |||||||||||||| ||||||| |||||||       |||||||||||||||||||| |||||||||||||||||||||    
T  46711781 ttattttcataaaattaaatacaaattacattcaaatttctctctctttcatttttt-cataaccaatagccaatgaatattgtttttacatcttcctat 46711683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 32619954 - 32619859
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |  ||       |||||||||||||||||||||||| |||||||||||||    
T  32619954 ttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttc 32619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 8703109 - 8703206
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||       ||||| |||||||||||| |||||||||||||||||||||||    
T  8703109 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 8703206  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 9054996 - 9055093
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||       ||||| |||||||||||| |||||||||||||||||||||||    
T  9054996 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca-tttttccataatcaatagccaatg-aaattgtttttacatcttcctat 9055093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 37074958 - 37075059
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattt--tctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    ||||||||||||||||||||||||||||||||||||||  || || | |||||        ||||||||||||||||||||||||| |||||||||||||    
T  37074958 ttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcct 37075057  T
Q  197 at 198  Q
    ||    
T  37075058 at 37075059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 2927289 - 2927385
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||  |       |||||||||||||||||||||||| ||||||||||||||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcc 2927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 3972275 - 3972371
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| ||       | ||||||||||| |||||||||||||||||||||||||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcc 3972371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 3997603 - 3997507
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    |||||||||| |||||||||||||||||||||||||||  ||| |||| ||       | ||||||||||| |||||||||||||||||||||||||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcc 3997507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 47867036 - 47866941
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||       ||||| ||||||||||||||||| |||||||||| ||||    
T  47867036 ttattctcataaa-ttaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacatattcc 47866941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 6752670 - 6752764
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||| |||| ||       ||||||||||||||||| |||||||||||||||||||    
T  6752670 ttattttcatgaaattaaatgcaaattacattcattttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctt 6752764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 20847391 - 20847293
Alignment:
Q  100 tattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||       ||||| ||||  ||||||||||||||||  ||||||||||||    
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctat 20847293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 26208014 - 26208108
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatctt 193  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||| ||       || ||  ||||||||||||||||||||||||||||||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatctt 26208108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 33974799 - 33974738
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  33974799 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagacaaactttt 33974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 53270233 - 53270334
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttc--tctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcct 196  Q
    |||||||||||||||||||| |||||||||||||||||||  ||| |||||||       |||||||||||| ||||||||||| ||||| |||||| ||    
T  53270233 ttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttct 53270332  T
Q  197 at 198  Q
    ||    
T  53270333 at 53270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 7866711 - 7866659
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  7866711 aaaaactcattttctttgtcccaaaatataaacaaaaaagacaaacttttatc 7866659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 48802696 - 48802554
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagca----aaaaagacaaacttttatcttttccaagannnnnnnnnng--ttattctc 106  Q
    ||||||| ||| |||||| || |||||||||||||||||||||| |    ||||| ||||||||||||||||| |||||             ||||||||    
T  48802696 aatataaacaaaaaaaacgcaatttctttgtcccaaaatataagaagaaaaaaaaaacaaacttttatctttttcaagatttttttttttgtttattctc 48802597  T
Q  107 ataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  48802596 ataaaagtaaatgcaaattacattcaattttctctctctttca 48802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2927172 - 2927235
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||| || |||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  2927172 aatataagtaaaaaaaactcattttctttgtcttaaaatataagcaaaaaagacaaacttttat 2927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttttta 187  Q
    |||||||||| |||||||||| |||||||||| |||||||||| |||||||       |||||| ||||||||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 21214140 - 21214202
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||  ||||||||||    
T  21214140 tataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatc 21214202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 22479273 - 22479211
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||  |||||||||||||||||| |||||||||||||||||||||||||||    
T  22479273 tataagtaaaaaaaattcattttctttgtcccaaattataagcaaaaaagacaaacttttatc 22479211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 28875290 - 28875356
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||||||| | |||||||||||||    
T  28875290 aatataagcaaaaaaagctcattttcattgtcccaaaatataagcaaaaaatataaacttttatctt 28875356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 38401279 - 38401341
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||  ||||||||||    
T  38401279 tataagcaaaaaaaactcattttctttgtcccaaattataagcaaaaaagatcaacttttatc 38401341  T

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Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 54465130 - 54465065
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctt 79  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  54465130 aatataagcaa-aaaaactcattttctttgtcctaaaatataagcaaaaaagataaatttttatctt 54465065  T

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Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6074965 - 6075030
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6074965 aatataagcaaaaaaaaactcattttcattgtcccaaaatataagcaaaaaagacaaacatttatc 6075030  T

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Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 35963033 - 35963094
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    ||||||||||| |||||| |||||||||||| |||||||||||||||||| |||| ||||||    
T  35963033 aatataagcaaaaaaaactcattttctttgtaccaaaatataagcaaaaatgacacactttt 35963094  T

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Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 37074861 - 37074906
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  37074861 cattttctttgtcccgaaatataagcaaaaaagacaaacttttatc 37074906  T

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Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 34194892 - 34194981
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||| ||| |||| |||||||        |||||||||| ||||||||||||||||||||||||||||||    
T  34194892 aaaattaaatgcaaagtgcattcagtttgctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctat 34194981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 38674870 - 38674959
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttac 188  Q
    ||||||| || ||||||||| ||||||| |||||||||||||| |||||||       ||||| |||||| |||||||||||||||||||    
T  38674870 ttattcttatgaaattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

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Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 21654141 - 21654204
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  21654141 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 21654204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 37324311 - 37324248
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| ||||| |||||||||  |||||||||||||||||||| |||||||||    
T  37324311 aatataagcaaaaaaatcacatattctttgtcttaaaatataagcaaaaaagaccaacttttat 37324248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 45347891 - 45347828
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||||||    
T  45347891 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45347828  T

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Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 6437962 - 6438028
Alignment:
Q  13 aatataagcaagaaaaa-cacattttctttgtcccaaaatataagc-aaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||| | |||||||||||||||||||||||||| |||||| |||||||||||||    
T  6437962 aatataagcaaaaaaaaactcattttctttgtcccaaaatataagcaaaaaaaaacaaacttttatc 6438028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 19464075 - 19464174
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||| |||||||       |||||||||||   ||||||||||||||||  ||||||||||    
T  19464075 ttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcctat 19464174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 22456227 - 22456165
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||| |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  22456227 tataagtaaaaaaaactcattttctttatcccaaattataagcaaaaaagaccaacttttatc 22456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 23209499 - 23209437
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||| |||||||||||||  ||| |||||||||||||||| ||||||||||    
T  23209499 tataagcaaaaaaaactcattttctttgtcttaaattataagcaaaaaagaccaacttttatc 23209437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 26725115 - 26725020
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    |||||||||| |||||| |||||||||||||||| |||| ||| ||||  |       ||||| ||||| ||||||||||||||||||||||||||    
T  26725115 ttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttc 26725020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 33974683 - 33974633
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    |||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  33974683 ttattctcataaaattaaatgcaaattacattaaattttctttctctttca 33974633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 23910579 - 23910538
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  23910579 cataaccaatagccaatgaaaattatttttacatcttcctat 23910538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 29235245 - 29235286
Alignment:
Q  157 cataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  29235245 cataaccaatagccaatgaaaattatttttacatcttcctat 29235286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 36189227 - 36189167
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||| | |||||||    
T  36189227 tataagcaaaaaaatcacattttctttgtcc-aaaatataagcaaaaaagaccatcttttat 36189167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 8097132 - 8097043
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||| | |||||||||| |||| |||||||        |||| ||||| |||||||||||| |||||||||||||||||    
T  8097132 aaaattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctat 8097043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 41476453 - 41476413
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttct 139  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  41476453 ttattctcataaaattaaatgcaaattagattcaattttct 41476413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 1335007 - 1335070
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| ||||||||||||||||||||| || ||||||    
T  1335007 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaagaccaatttttat 1335070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 16739358 - 16739315
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  16739358 attttctttgtctcaaaatataagcaaaaaagaccaacttttat 16739315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 19463970 - 19464021
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| |||||||||  |||||||||||||||| |||||||||||||||||    
T  19463970 aaaaactcattttcttcatcccaaaatataagcagaaaagacaaacttttat 19464021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 23513464 - 23513527
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||||||||| || |||||||||    
T  23513464 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaataccaacttttat 23513527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26641335 - 26641272
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||||||||||| || |||||||||    
T  26641335 aatataagcaaaaaaatctcatattctttgtctcaaaatataagcaaaaaacaccaacttttat 26641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 28793058 - 28793121
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||||   ||||| |||||| ||||||||||||||||||||| |||||||||    
T  28793058 aatataagcaaaaaaaatttattttatttgtctcaaaatataagcaaaaaagaccaacttttat 28793121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 31126109 - 31126172
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| ||||||||| |||||||||| |||||||||| |||||||||    
T  31126109 aatataagcaaaaaaatctcatattctttgtctcaaaatataaacaaaaaagaccaacttttat 31126172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 34722564 - 34722599
Alignment:
Q  104 ctcataaaattaaatgcaaattacattcaattttct 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722564 ctcataaaattaaatgcaaattacattcaattttct 34722599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 41476566 - 41476505
Alignment:
Q  14 atataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||| |||||| |||||| |||||||||||||||||  ||||||||||||||||||||    
T  41476566 atataagcaa-aaaaactcattttgtttgtcccaaaatataa-taaaaaagacaaacttttatc 41476505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 51426514 - 51426577
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||| |||||||||  |||||||||||||||||||| |||||||||    
T  51426514 aatataagcaaaaaaatctcatattctttgtcttaaaatataagcaaaaaagaccaacttttat 51426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 9264008 - 9264058
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttca 149  Q
    |||||||||||||||||||||||||||||||  |||||| ||| |||||||    
T  9264008 ttattctcataaaattaaatgcaaattacatctaattttatctctctttca 9264058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 26207718 - 26207768
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||||| |||||||||||||||||||| |||| ||||||    
T  26207718 aatataagcaaaaaaaactcattttctttgtcccaaaatgtaagaaaaaaa 26207768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 34022518 - 34022568
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||||||||||    
T  34022518 aatataagcaaaaaaatctcattttctttgtctcaaaatataagcaaaaaa 34022568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 50730109 - 50730151
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  50730109 ttattctcttaaaattaaatgtaaattacattcaattttctct 50730151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 50782745 - 50782703
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  50782745 ttattctcttaaaattaaatgtaaattacattcaattttctct 50782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 54725822 - 54725772
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaaga 65  Q
    ||||||||| |||||  |||||||||||||||||| |||||||||||||||    
T  54725822 tataagcaaaaaaaaatcattttctttgtcccaaattataagcaaaaaaga 54725772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 2994620 - 2994575
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||    
T  2994620 cattttctttgtcccaaattataagaaaaaatgacaaacttttatc 2994575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 46711880 - 46711835
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||||    
T  46711880 cattttctttgtctcaaaatataagcataaaaaacaaacttttatc 46711835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 50651258 - 50651213
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||    
T  50651258 cattttctttgttccaatatataagcaaaaaagataaacttttatc 50651213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 579389 - 579325
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||| |||||| |||||| ||||||  || || ||||||||||| ||||||||||||||||||||    
T  579389 aatacaagcaaaaaaaactcatttttattatctcaaaatataagtaaaaaagacaaacttttatc 579325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 6752571 - 6752615
Alignment:
Q  33 attttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||    
T  6752571 attttctttgtcctaaaatttaagtaaaaaagacaaacttttatc 6752615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 7886731 - 7886642
Alignment:
Q  109 aaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||| | |||||||||| |||| |||||||        ||||| |||| ||||||||||||||||||||||||| ||||    
T  7886731 aaaatcaaatgcaaagtgcattcaatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctat 7886642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 8764889 - 8764837
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || ||| |||||| |||||| |||||||||||||||||||||||||    
T  8764889 aaaaactcaatttttttgtcgcaaaatttaagcaaaaaagacaaacttttatc 8764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 9264610 - 9264646
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttc 194  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9264610 ataacgaatagccaatgaaaattgtttttacatcttc 9264646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 16033052 - 16033012
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  16033052 ataactaataaccaatgaaaattgtttttacatcttcctat 16033012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 31836849 - 31836900
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||| ||||||||||||| ||||||||||| |||||||||||||    
T  31836849 aaaaactcatttt-tttgtcccaaaatgtaagcaaaaaatacaaacttttatc 31836900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 45781313 - 45781357
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||    
T  45781313 cattttctttgtctcaaaatataagcaaaaaagatcaacttttat 45781357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 46918278 - 46918238
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  46918278 ataaccaataaccaatgaaaattgtttttagatcttcctat 46918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 49583874 - 49583926
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| |||||| | ||||||||| |||||||||||||||| ||||||||||    
T  49583874 aaaaactcattttttctgtcccaaattataagcaaaaaagaccaacttttatc 49583926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 51311556 - 51311619
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||| ||||||  |||||| |||||| |||||||||| |||||||||||| |||||||    
T  51311556 aatataagcaaaaaaaacttattttcattgtcc-aaaatataagtaaaaaagacaaatttttatc 51311619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 3972174 - 3972213
Alignment:
Q  37 tctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  3972174 tctttgtcccaaaatgtaagcaaaaaagataaacttttat 3972213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 3997704 - 3997665
Alignment:
Q  37 tctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  3997704 tctttgtcccaaaatgtaagcaaaaaagataaacttttat 3997665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 8769683 - 8769644
Alignment:
Q  101 attctcataaaattaaatgcaaattacattcaattttctc 140  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  8769683 attctcattaaattaaatgcaaattacgttcaattttctc 8769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 34194786 - 34194849
Alignment:
Q  15 tataagcaagaaaaa-cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| ||||| | || ||||||||||||| | |||||||||||||||| ||||||||||    
T  34194786 tataagcaaaaaaaagcccactttctttgtcccagattataagcaaaaaagaccaacttttatc 34194849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 43575855 - 43575918
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | | |||| |||||| ||||||||||||||||||||  |||||||||    
T  43575855 aatataagcaaaaaaatctctttttttttgtctcaaaatataagcaaaaaagatcaacttttat 43575918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 46557430 - 46557379
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    |||||| |||||||||||||  |||||||||| |||||||||||| ||||||    
T  46557430 aaaaactcattttctttgtcttaaaatataagtaaaaaagacaaatttttat 46557379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 46580433 - 46580496
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||| ||||||||| ||||||||||| ||||||||| |||||||||    
T  46580433 aatataagcaaaaaaatttcatattctttgtctcaaaatataagtaaaaaagaccaacttttat 46580496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 46819946 - 46820009
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| | ||||||||||||| ||||||||||  ||||||||  |||||||||    
T  46819946 aatataagcaaaaaaatctcattttctttgtctcaaaatataaataaaaaagatcaacttttat 46820009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 198
Target Start/End: Complemental strand, 54725670 - 54725635
Alignment:
Q  163 caatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||| ||||||||||||||||||||||||||||||    
T  54725670 caataaccaatgaaaattgtttttacatcttcctat 54725635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 55400635 - 55400698
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| ||||   ||| ||||||||| |||||||||||||||||||||  ||||||||    
T  55400635 aatataagcaaaaaaatttcatattctttgtctcaaaatataagcaaaaaagacttacttttat 55400698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 10114811 - 10114872
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||  ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  10114811 tataagcaaaaaaaattcattttctttgtctcaaattataagcaaaaaatac-aacttttatc 10114872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30454934 - 30454896
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaa 63  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  30454934 aaaaacccattttctttgtcccaaattataagcaaaaaa 30454896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32070146 - 32070207
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||| |||||||||| ||||||| ||||||| ||||||| |||||||||||    
T  32070146 tataagtaaaaaaaactcattttctttctcccaaattataagc-aaaaagataaacttttatc 32070207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 36509582 - 36509540
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||| |||||||||| ||||||||||| |||||||||    
T  36509582 ttattctcatcaaattaaatgtaaattacattcgattttctct 36509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 41936313 - 41936271
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctct 141  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  41936313 ttattctcatgaaactaaatgcaaattgcattcaattttctct 41936271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 47444195 - 47444133
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||   ||||||||||||||||| ||||||||||||| |  ||||||||||    
T  47444195 tataagcaaaaaaaatcaattttctttgtcccaaattataagcaaaaaatatcaacttttatc 47444133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 8764783 - 8764746
Alignment:
Q  101 attctcataaaattaaatgcaaattacattcaattttc 138  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8764783 attctcattaaattaaatgcaaattacgttcaattttc 8764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 10014333 - 10014362
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  10014333 ccaatgaaaattgtttttacatcttcctat 10014362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 10114975 - 10115004
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  10114975 ccaatgaaaattgtttttacatcttcctat 10115004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 10251927 - 10251972
Alignment:
Q  32 cattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||    
T  10251927 cattttctttgtctcaaattataagcaaaaaataccaacttttatc 10251972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 198
Target Start/End: Original strand, 10252075 - 10252104
Alignment:
Q  169 ccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||||    
T  10252075 ccaatgaaaattgtttttacatcttcctat 10252104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 26725220 - 26725167
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatct 78  Q
    |||||| ||||||  |||||| ||||| |||| |||||||||||||||||||||    
T  26725220 aaaaactcatttttgttgtcctaaaatgtaagtaaaaaagacaaacttttatct 26725167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 31292664 - 31292701
Alignment:
Q  158 ataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  31292664 ataacaaataaccaatgaaaattgtttttacatcttcc 31292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 32322462 - 32322409
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagac 66  Q
    |||||||||||  ||| | ||||||||||||| ||||||||||| |||||||||    
T  32322462 aatataagcaaataaatctcattttctttgtctcaaaatataagtaaaaaagac 32322409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 8769789 - 8769738
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    |||||| || |||||||||| |||||| |||| ||||||||||||||||||||    
T  8769789 aaaaactcaatttctttgtcgcaaaatgtaag-aaaaaagacaaacttttatc 8769738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 13541197 - 13541237
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||| ||||||||| |||||||||    
T  13541197 ttctttgtctcaaaatataagaaaaaaagaccaacttttat 13541237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 49067033 - 49067073
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  49067033 ttctttgtctcaaaatataagcaaaaaagatcaacttttat 49067073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 136
Target Start/End: Original strand, 51426621 - 51426649
Alignment:
Q  108 taaaattaaatgcaaattacattcaattt 136  Q
    |||||||||||||||||||||||||||||    
T  51426621 taaaattaaatgcaaattacattcaattt 51426649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 25 - 198
Target Start/End: Original strand, 77880 - 78052
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaat 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           ||||||||||||||||||||| ||||    
T  77880 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgt-ttattctcataaaattaaatgtaaat 77978  T
Q  125 tacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||| ||||||||||       |||||||||| |||||||||||||||||||||||||||||||    
T  77979 tacattcaattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctat 78052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 154772 - 154956
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||           ||||||||||||||    
T  154772 aatataagcaaaaaaaacatattttctttgtctcaaaatataagtaaaaaagataaacttttatctttttcaagatttttttttt-ttattctcataaaa 154870  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||||||||||| |||||||||| |||||||       |||||||||||||||||| |||||||||||||||||| ||||    
T  154871 ttaaatgcaaattacattaaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctat 154956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 3674 - 3494
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaa 112  Q
    ||||||||||| ||||||||   |||||||||||||||||||||||||||||| |||||||||||||||| ||||           ||||||||||| ||    
T  3674 aatataagcaa-aaaaacac---ttctttgtcccaaaatataagcaaaaaagataaacttttatcttttctaagattgttgttgt-ttattctcatacaa 3580  T
Q  113 ttaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||| |||||||||||||||||    
T  3579 ttaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 3494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 9979 - 10140
Alignment:
Q  36 ttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagannnnnnnnnngttattctcataaaattaaatgcaaattacattcaatt 135  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||           ||||||||||| |||||||||||||||||||||||||    
T  9979 ttctttgtcccaaaatataagtaaaaaaggcaaacttttatcttttctaagattttttttgt-ttattctcatacaattaaatgcaaattacattcaatt 10077  T
Q  136 ttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||| |||||||       |||||||||||| |||||||||||||||||||||||||||||    
T  10078 ttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctat 10140  T

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Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 157790 - 157883
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatct 192  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||||| |       |||||||||| |||||||||||||||||||||||||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatct 157883  T

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Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 157673 - 157737
Alignment:
Q  13 aatataagcaagaaaa-acacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  157673 aatataagcaaaaaaatacttattttctttgtcccaaaatataagcaaaaaagacaaacttttat 157737  T

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Target: scaffold0062 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 44936 - 44849
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgttttt 186  Q
    |||||||| ||||||||||||||||||||||| ||||||| || |||||||       ||||||||||||||||||||||||||||||    
T  44936 ttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttt 44849  T

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Target: scaffold0132 (Bit Score: 49; Significance: 6e-19; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 896 - 956
Alignment:
Q  17 taagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  896 taagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 956  T

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Target: scaffold0132; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 8856 - 8916
Alignment:
Q  17 taagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8856 taagcaaaaaaaattcattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 8916  T

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Target: scaffold0132; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 1008 - 1107
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||       |||||||||||  ||||||||| |||||||||||||| ||||    
T  1008 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 1107  T

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Target: scaffold0132; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 8968 - 9067
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||       |||||||||||  ||||||||| |||||||||||||| ||||    
T  8968 ttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctat 9067  T

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Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 160246 - 160342
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcc 195  Q
    ||||||| || |||||||||  |||||||||||||||||||||||||| ||       |||||||||||||||||||||| || |||||||||||||    
T  160246 ttattcttatgaaattaaatataaattacattcaattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcc 160342  T

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Target: scaffold0111 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 40175 - 40274
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcannnnnnncataaccaatagccaatgaaaattgtttttacatcttcctat 198  Q
    |||||||||| |||||||||||||||||||||||| ||||||| || | ||        |||||||||||||||||||||||||||||||| ||| ||||    
T  40175 ttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctat 40274  T

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Target: scaffold0495 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4527 - 4590
Alignment:
Q  13 aatataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttat 76  Q
    ||||||||||| |||  | ||| ||||||||| ||||||||||||||||||||| |||||||||    
T  4527 aatataagcaaaaaattctcatattctttgtctcaaaatataagcaaaaaagaccaacttttat 4590  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 233652 - 233616
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaatt 135  Q
    |||||||||| ||||||||||||||||||||||||||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaatt 233616  T

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Target: scaffold0565 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 6132 - 6071
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| ||||||  ||||||||||||||||  ||||||||||||| || ||||||||||    
T  6132 tataagcaaaaaaaacttattttctttgtcccaagttataagcaaaaaa-accaacttttatc 6071  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 3069 - 3131
Alignment:
Q  15 tataagcaagaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatc 77  Q
    ||||||||| |||||  |||||||||| ||| ||| |||||||||||||||  ||||||||||    
T  3069 tataagcaaaaaaaatccattttctttatcctaaattataagcaaaaaagatcaacttttatc 3131  T

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Target: scaffold1786 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 860 - 900
Alignment:
Q  99 ttattctcataaaattaaatgcaaattacattcaattttctc 140  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  860 ttattctcatgaaattaaatgcaaattacatt-aattttctc 900  T

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Target: scaffold1157 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 2108 - 2060
Alignment:
Q  25 aaaaacacattttctttgtcccaaaatataagcaaaaaagacaaactttt 74  Q
    |||||| |||||||| ||||||||| |||||||| |||||||||||||||    
T  2108 aaaaactcattttctatgtcccaaattataagca-aaaagacaaactttt 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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