View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7562_low_6 (Length: 281)
Name: NF7562_low_6
Description: NF7562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7562_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 6258413 - 6258179
Alignment:
| Q |
18 |
agtaattgaattattttcaccactgttattaactgtcatgttccattttccacctcttcttccaactccaacaaccttagtaactgagtttggaacatgg |
117 |
Q |
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| T |
6258413 |
agtaattgaattattttcaccattgttattaactgtcatgttccattttccacctcttcttccaactccaacaaccttagtaactgaatttggaacatag |
6258314 |
T |
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| Q |
118 |
attcttctatgtgacaaagaagtcaaaggtgaagctgagttcaatattagcacttgtgtgctgctactagaactacacaccataaacattttatgctcca |
217 |
Q |
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| T |
6258313 |
attcttctatgtgacaaagaagtcaaaggtgaagctgagttcaatattagcacttgtgtgctgctactagaactacacaccataaacattttatgctcca |
6258214 |
T |
|
| Q |
218 |
attcacccactaccacatagactcttcaaacttaa |
252 |
Q |
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| T |
6258213 |
cttcacccaccaccacatagactcttcaaacttaa |
6258179 |
T |
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