View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7563_high_10 (Length: 252)
Name: NF7563_high_10
Description: NF7563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7563_high_10 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 23330672 - 23330906
Alignment:
| Q |
18 |
atacatgtgactgtgtaagctttgcgttgtgcaccgtcgaaggttgacccttaattctgcaatttctactaaatattataatttgttgtatacgttgttt |
117 |
Q |
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| T |
23330672 |
atacatgtgactgtgtaagctttgcgttgtgcaccgtcgaaggttgacccttaattctgcaatttctactaaatattataatttgttgtatacgttgttt |
23330771 |
T |
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| Q |
118 |
tgtgaccgacgagttctttgtcctcttagaatcacattataattagtataattgttatgatgtgtactttaataagtatagttcaattgatctatgtaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23330772 |
tgtgaccgacgagttctttgtcctcttagaatcacattataattagtataattgttatgatgtgtactttaataagtatagttcaattgatctatgtaat |
23330871 |
T |
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| Q |
218 |
tgatgattaagttagaatttaaaaatatcaagact |
252 |
Q |
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|||||||||||||||||||||||||||| |||||| |
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| T |
23330872 |
tgatgattaagttagaatttaaaaatatgaagact |
23330906 |
T |
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