View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7565_low_1 (Length: 651)

Name: NF7565_low_1
Description: NF7565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7565_low_1
NF7565_low_1
[»] chr6 (5 HSPs)
chr6 (18-364)||(24253901-24254247)
chr6 (363-560)||(24253678-24253875)
chr6 (556-637)||(24253564-24253645)
chr6 (556-637)||(22567425-22567506)
chr6 (492-559)||(22567540-22567607)
[»] chr7 (8 HSPs)
chr7 (23-198)||(19325618-19325798)
chr7 (28-115)||(12819673-12819760)
chr7 (28-95)||(19645433-19645500)
chr7 (363-429)||(19324417-19324483)
chr7 (238-333)||(19820162-19820257)
chr7 (217-276)||(19324851-19324910)
chr7 (26-73)||(20057832-20057879)
chr7 (58-104)||(22064379-22064425)
[»] chr3 (4 HSPs)
chr3 (203-327)||(20863638-20863762)
chr3 (363-429)||(20863362-20863428)
chr3 (28-76)||(25901042-25901090)
chr3 (29-76)||(25915060-25915107)
[»] chr5 (9 HSPs)
chr5 (28-154)||(29642609-29642735)
chr5 (28-150)||(29820890-29821012)
chr5 (28-109)||(29597298-29597378)
chr5 (28-141)||(29593913-29594027)
chr5 (236-342)||(29643464-29643570)
chr5 (236-342)||(29648683-29648789)
chr5 (28-90)||(29647930-29647992)
chr5 (236-297)||(29596546-29596607)
chr5 (33-141)||(28763595-28763702)
[»] chr4 (1 HSPs)
chr4 (23-84)||(53790816-53790877)
[»] chr2 (3 HSPs)
chr2 (556-635)||(11389862-11389941)
chr2 (556-635)||(11406523-11406602)
chr2 (33-73)||(21021047-21021087)
[»] chr8 (1 HSPs)
chr8 (28-95)||(27618720-27618787)
[»] chr1 (1 HSPs)
chr1 (28-94)||(15961475-15961541)


Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 18 - 364
Target Start/End: Complemental strand, 24254247 - 24253901
Alignment:
Q  18 ggaaattcgtcaaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatgcg 117  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24254247 ggaaattcttcaaggattacgttgaaagtttggcttcaatttgttgaaaataagtttctttatgatgatttacttgttctaatttgtttggattcatgcg 24254148  T
Q  118 tgttgttttgaaatctttgtcattccatagtaatagaatagattgcaagtatattttgctgttgacttattatattgttaagtaaatctatatattaatt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  24254147 tgttgttttgaaatctttgtcattccatagtaatagaatagattgcaagtatattttgttgttgacttattatattgttaagtgcatctatatattaatt 24254048  T
Q  218 tactatcatatggtttacccccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcagcaaaatttgcatcaataaaa 317  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24254047 tactatcatatggttttcccccaaagttttgttgattgataattccctatcaaactttgaattctttcagcaaatttcagcaagatttgcatcaataaaa 24253948  T
Q  318 cataacatggcttctatttccaaagtgatatagttttattggactag 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24253947 cataacatggcttctatttccaaagtgatatagttttattggactag 24253901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 363 - 560
Target Start/End: Complemental strand, 24253875 - 24253678
Alignment:
Q  363 agcagtaataatcaacaacaaaattaatcctaatcatgcatcaatataggactttgatgggaatacagtatgccgattgccatttcaactcgaccgttag 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  24253875 agcagtaataatcaacaacaaaattaatcctaatcatgcatcaatataggactttgatgggaataaagtatgctgattgccatttcaactcgaccgttag 24253776  T
Q  463 catatcgaattgttttgttatatgggatcattttcagatttcctaactcgcttaccttctttagactcataaggttcgcatttgctctggaatcacat 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  24253775 catatcgaattgttttgttatatgggatcattttcagatttcctaactcgcttgccttctttagactcataaggttcgcatttgctccggaatcacat 24253678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 24253645 - 24253564
Alignment:
Q  556 cacatggagtgtataccatccttcaccatcaaacttgacggttgcaggtacctcgaagttgatgcgacactcttcagtaagt 637  Q
    |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24253645 cacagggagtgtatagcatccttcaccatcaaacctgacggttgcaggtacctcgaagttgatgcgacactcttcagtaagt 24253564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 637
Target Start/End: Complemental strand, 22567506 - 22567425
Alignment:
Q  556 cacatggagtgtataccatccttcaccatcaaacttgacggttgcaggtacctcgaagttgatgcgacactcttcagtaagt 637  Q
    |||| ||||| |||| |||||||||||||  ||||||||||||| | | ||||||||||| ||| |||||||||||||||||    
T  22567506 cacaaggagtatataacatccttcaccattgaacttgacggttgtaagaacctcgaagttaatgtgacactcttcagtaagt 22567425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 559
Target Start/End: Complemental strand, 22567607 - 22567540
Alignment:
Q  492 attttcagatttcctaactcgcttaccttctttagactcataaggttcgcatttgctctggaatcaca 559  Q
    ||||||||||| |||||||||||| ||||||| |||||||| |||||| |||| |||| |||||||||    
T  22567607 attttcagattccctaactcgcttgccttcttaagactcattaggttcacattggctccggaatcaca 22567540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 8e-66; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 19325798 - 19325618
Alignment:
Q  23 ttcgtcaaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatgcgtgttg 122  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  19325798 ttcgccaaggattatgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttccaatttgtttgaattcatgcgggttg 19325699  T
Q  123 ttttgaaatctttgtcattcc----atagtaatagaatagattgcaagtatattttgctg-ttgacttattatattgttaa 198  Q
    |||||||||| ||||||||||    |||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  19325698 ttttgaaatccttgtcattccatatatagtaatagaatagattgcaattatattttgatgtttgacttattatattgttaa 19325618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 115
Target Start/End: Complemental strand, 12819760 - 12819673
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatg 115  Q
    ||||||||| ||||||||||||||||||||||||||||| | |||||||  ||| |||||||||||||  ||||| ||||||||||||    
T  12819760 caaggattatgttgaaagtttggcttcaatttgttgaaactgagtttctacatgttgatttacttgtttgaatttatttgaattcatg 12819673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 19645500 - 19645433
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgtt 95  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  19645500 caaggattatgttgaaagtttggtttcaacttgttgaaagtaagtttctttattatgatttacttgtt 19645433  T

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Target: chr7; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 19324483 - 19324417
Alignment:
Q  363 agcagtaataatcaacaacaaaattaatcctaatcatgcatcaatataggactttgatgggaataca 429  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19324483 agcagtaagaatcaacaataaaattaatcctaatcatgcatcaagataggactttgatgggattaca 19324417  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 238 - 333
Target Start/End: Original strand, 19820162 - 19820257
Alignment:
Q  238 ccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcagcaaaatttgcatcaataaaacataacatggcttcta 333  Q
    |||||||||||||||||| |||||||||| ||| ||||||||| |||| || |||||||||||  || ||||||| | || ||| |||||||||||    
T  19820162 ccaaagttttgttgattggtaattccctatcaatctttgaattatttctgctaatttcagcaagcttggcatcaagagaatatatcatggcttcta 19820257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 19324910 - 19324851
Alignment:
Q  217 ttactatcatatggtttacccccaaagttttgttgattgataattccctaccaaactttg 276  Q
    ||||||||||||||||| ||||||||||||| ||||||| | |||||||| ||| |||||    
T  19324910 ttactatcatatggttttcccccaaagttttcttgattgttgattccctatcaatctttg 19324851  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 20057879 - 20057832
Alignment:
Q  26 gtcaaggattacgttgaaagtttggcttcaatttgttgaaagtaagtt 73  Q
    ||||||||||| |||||||| |||||||||| ||||||| ||||||||    
T  20057879 gtcaaggattatgttgaaagcttggcttcaacttgttgatagtaagtt 20057832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 22064379 - 22064425
Alignment:
Q  58 ttgttgaaagtaagtttctttatgatgatttacttgttctaatttgt 104  Q
    |||||||||||||||||||||| || ||||||||||||  |||||||    
T  22064379 ttgttgaaagtaagtttctttacgacgatttacttgtttgaatttgt 22064425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 9e-38; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 20863762 - 20863638
Alignment:
Q  203 atctatatattaatttactatcatatggtttacccccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcagcaaaa 302  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||| ||| |||||||||||||| |||||||||||||| |    
T  20863762 atctatatattaatttactatcatatggttttcccccaaagttttcttgattggtgattccctatcaatctttgaattctttctgcaaatttcagcaaga 20863663  T
Q  303 tttgcatcaataaaacataacatgg 327  Q
    ||||||| |||| || |||||||||    
T  20863662 tttgcatgaatagaaaataacatgg 20863638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 429
Target Start/End: Complemental strand, 20863428 - 20863362
Alignment:
Q  363 agcagtaataatcaacaacaaaattaatcctaatcatgcatcaatataggactttgatgggaataca 429  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  20863428 agcagtaagaatcaacaataaaattaatcctaatcatgcatcaagataggactttgatgggattaca 20863362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 25901090 - 25901042
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttct 76  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  25901090 caaggattacgttgaaagtttggtttcaactagttgaaagtgagtttct 25901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 25915107 - 25915060
Alignment:
Q  29 aaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttct 76  Q
    |||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  25915107 aaggattacgttgaaagtttggtttcaactagttgaaagtgagtttct 25915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 8e-32; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 29642609 - 29642735
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatgcgtgttgttttg 127  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||  |||| |||||    
T  29642609 caaggattatgttgaaagtttggcttggatttgttgaaagtaagtttctttacaatgatttacttgttcaaatttatttgaattcatgtatgttattttg 29642708  T
Q  128 aaatctttgtcattccatagtaataga 154  Q
    ||||| || | ||| ||||||||||||    
T  29642709 aaatccttataatttcatagtaataga 29642735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 29821012 - 29820890
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatgcgtgttgttttg 127  Q
    ||||||||| ||||||||||| ||||  ||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||  |||| |||||    
T  29821012 caaggattatgttgaaagtttagcttggatttgttgaaagtaagtttctttacaatgatttacttgttcgaatttatttgaattcatgtatgttattttg 29820913  T
Q  128 aaatctttgtcattccatagtaa 150  Q
    |||||| | ||||| ||||||||    
T  29820912 aaatctatatcatttcatagtaa 29820890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 29597378 - 29597298
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaa 109  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||| ||||| ||||||    
T  29597378 caaggattatgttgaaagtttggcttcgatttgttgaaagtaag-ttctttagaatgatttacttgttcgaatttatttgaa 29597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 29594027 - 29593913
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgat-gatttacttgttctaatttgtttgaattcatgcgtgttgtttt 126  Q
    |||||||||  |||||||||||||||| |||| |||||||||||||||||||  || ||||||| ||||| ||||| ||  ||||||||| |||| ||||    
T  29594027 caaggattattttgaaagtttggcttcgatttcttgaaagtaagtttctttacaatggatttacctgttcaaatttattcaaattcatgcatgttatttt 29593928  T
Q  127 gaaatctttgtcatt 141  Q
    | ||||  |||||||    
T  29593927 ggaatccatgtcatt 29593913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 29643464 - 29643570
Alignment:
Q  236 ccccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcagcaaaatttgcatcaataaaacataacatggcttctatt 335  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||| |||| || |||| ||| ||  |  ||||||| | || ||||||||||||||| |    
T  29643464 ccccaaagttttgttgattggtaattctctaccaatctttgaattatttctgctaattccagtaagctcagcatcaagagaatataacatggcttctact 29643563  T
Q  336 tccaaag 342  Q
    || ||||    
T  29643564 tctaaag 29643570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 29648683 - 29648789
Alignment:
Q  236 ccccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcagcaaaatttgcatcaataaaacataacatggcttctatt 335  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||| |||| || |||| ||| ||  |  ||||||| | || ||||||||||||||| |    
T  29648683 ccccaaagttttgttgattggtaattctctaccaatctttgaattatttctgctaattccagtaagctcagcatcaagagaatataacatggcttctact 29648782  T
Q  336 tccaaag 342  Q
    || ||||    
T  29648783 tctaaag 29648789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 29647930 - 29647992
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttac 90  Q
    ||||||||  ||||||| ||||||||  ||||||||||||||||||||||||  |||||||||    
T  29647930 caaggattgtgttgaaaatttggcttggatttgttgaaagtaagtttctttacaatgatttac 29647992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 29596607 - 29596546
Alignment:
Q  236 ccccaaagttttgttgattgataattccctaccaaactttgaattctttcagcaaatttcag 297  Q
    |||||| ||||||||||||| |||||| ||| ||| ||||||||| |||| || ||||||||    
T  29596607 ccccaatgttttgttgattggtaattctctatcaatctttgaattatttctgctaatttcag 29596546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 28763702 - 28763595
Alignment:
Q  33 attacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgttctaatttgtttgaattcatgcgtgttgttttgaaatc 132  Q
    |||| ||||||||||||| | ||||||| ||| | |  ||| |||| | ||||||||||||||  ||||| ||||||||  ||| | |||||||||||||    
T  28763702 attatgttgaaagtttggttccaatttgctgacaatt-gttcctttcttatgatttacttgtttgaatttatttgaattgttgcattttgttttgaaatc 28763604  T
Q  133 tttgtcatt 141  Q
     ||||||||    
T  28763603 cttgtcatt 28763595  T

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Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 53790816 - 53790877
Alignment:
Q  23 ttcgtcaaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatg 84  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||    
T  53790816 ttcgccaaggattatgttgaaagtttggcttcaattcgttgaaaggaagttcctttatgatg 53790877  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 556 - 635
Target Start/End: Original strand, 11389862 - 11389941
Alignment:
Q  556 cacatggagtgtataccatccttcaccatcaaacttgacggttgcaggtacctcgaagttgatgcgacactcttcagtaa 635  Q
    |||| |||||||||| ||||||||||| ||||||||| |||   || |||||||||||||||||| || |||||||||||    
T  11389862 cacagggagtgtataacatccttcaccgtcaaacttggcggacacatgtacctcgaagttgatgcaaccctcttcagtaa 11389941  T

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Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 556 - 635
Target Start/End: Original strand, 11406523 - 11406602
Alignment:
Q  556 cacatggagtgtataccatccttcaccatcaaacttgacggttgcaggtacctcgaagttgatgcgacactcttcagtaa 635  Q
    |||| |||||||||| ||||||||||| ||||||||| |||   || |||||||||||||||||| || |||||||||||    
T  11406523 cacagggagtgtataacatccttcaccgtcaaacttggcggacacatgtacctcgaagttgatgcaaccctcttcagtaa 11406602  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 21021087 - 21021047
Alignment:
Q  33 attacgttgaaagtttggcttcaatttgttgaaagtaagtt 73  Q
    |||| ||||||||||||| ||||| ||||||||||||||||    
T  21021087 attatgttgaaagtttggtttcaacttgttgaaagtaagtt 21021047  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 27618720 - 27618787
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgtt 95  Q
    ||||||||| |||||||| |||| |||||||| ||||||||||||| || | ||| || |||||||||    
T  27618720 caaggattatgttgaaagcttggtttcaatttcttgaaagtaagttcctatttgacgaattacttgtt 27618787  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 15961475 - 15961541
Alignment:
Q  28 caaggattacgttgaaagtttggcttcaatttgttgaaagtaagtttctttatgatgatttacttgt 94  Q
    ||||| |||||||||||| |||| ||||  ||||||||||||||||||| ||  | |||||||||||    
T  15961475 caagggttacgttgaaagcttggtttcatattgttgaaagtaagtttctctacaacgatttacttgt 15961541  T

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