View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7566_high_20 (Length: 327)
Name: NF7566_high_20
Description: NF7566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7566_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 14513576 - 14513269
Alignment:
| Q |
1 |
tgaagaacaaaaccaatgaaaaagacacataaaccttttcattcattaatttcaagtttaagaacaagaatcttaatatcactacaatatttccttcacc |
100 |
Q |
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| T |
14513576 |
tgaagaacaaaaccaatgaaaaagacacataaaccttctcattgattaatttcaagtttaggaacaagaatcttaatatcactacaatatttccttcacc |
14513477 |
T |
|
| Q |
101 |
tactcatccaaatgttgcactctcacatacaccacaatcaccaatttctcttcacaaacctcccaatttccttaacaacccaccacttttcttcaccatc |
200 |
Q |
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| T |
14513476 |
tactcatccaaatgttgcactctcacttacaccacaatcaccaatttctcttcacaaacctcccaatttccttaacaacccaccacttttcttcaccatc |
14513377 |
T |
|
| Q |
201 |
tcctcttcataaatttcatcataattctcactctatttatgccattaatccttctcaagaagtatttttaccgttgctaaataaattaaccactgcaaaa |
300 |
Q |
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| T |
14513376 |
tcctcttcataaatttcatcataattctcacactatttatgccattaatccttctcaagaagtatttttaccgttgctaaataaattaatcactgcaaaa |
14513277 |
T |
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| Q |
301 |
gtggaatt |
308 |
Q |
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|||||||| |
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| T |
14513276 |
gtggaatt |
14513269 |
T |
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