View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7566_high_5 (Length: 522)

Name: NF7566_high_5
Description: NF7566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7566_high_5
NF7566_high_5
[»] chr1 (25 HSPs)
chr1 (14-385)||(6474212-6474576)
chr1 (416-522)||(6474075-6474181)
chr1 (466-521)||(47719113-47719168)
chr1 (466-520)||(31759900-31759954)
chr1 (466-520)||(50849080-50849134)
chr1 (458-515)||(43843883-43843940)
chr1 (466-514)||(30678826-30678874)
chr1 (466-514)||(35473952-35474000)
chr1 (466-510)||(37944147-37944191)
chr1 (466-522)||(45677285-45677341)
chr1 (466-521)||(9639823-9639878)
chr1 (471-510)||(29042542-29042581)
chr1 (465-512)||(33153895-33153942)
chr1 (466-521)||(42146315-42146370)
chr1 (471-522)||(47417788-47417839)
chr1 (490-520)||(422571-422601)
chr1 (466-512)||(25165107-25165153)
chr1 (465-510)||(12852219-12852264)
chr1 (471-512)||(31092666-31092707)
chr1 (458-522)||(2994750-2994814)
chr1 (466-522)||(5270745-5270801)
chr1 (488-520)||(10385310-10385342)
chr1 (466-506)||(12212295-12212335)
chr1 (466-522)||(13590110-13590166)
chr1 (465-521)||(50466329-50466385)
[»] chr8 (11 HSPs)
chr8 (465-522)||(45049574-45049631)
chr8 (466-522)||(12249490-12249546)
chr8 (465-512)||(56819-56866)
chr8 (468-515)||(18959151-18959198)
chr8 (466-512)||(21557433-21557479)
chr8 (466-516)||(35682703-35682753)
chr8 (466-512)||(37999435-37999481)
chr8 (465-522)||(23159440-23159497)
chr8 (466-522)||(3650520-3650576)
chr8 (466-522)||(6447189-6447245)
chr8 (466-510)||(15188899-15188943)
[»] chr2 (24 HSPs)
chr2 (468-521)||(7772466-7772519)
chr2 (466-522)||(44026608-44026664)
chr2 (466-516)||(31837947-31837997)
chr2 (465-522)||(36264484-36264541)
chr2 (465-521)||(4238758-4238814)
chr2 (467-522)||(5168584-5168639)
chr2 (465-512)||(27152352-27152399)
chr2 (464-510)||(14944160-14944206)
chr2 (466-512)||(18678137-18678183)
chr2 (466-512)||(20239343-20239389)
chr2 (466-512)||(32091186-32091232)
chr2 (466-520)||(34977204-34977258)
chr2 (492-522)||(44488015-44488045)
chr2 (466-511)||(7640658-7640703)
chr2 (465-522)||(20120726-20120783)
chr2 (465-521)||(28644524-28644581)
chr2 (465-513)||(4897542-4897590)
chr2 (465-513)||(4944936-4944984)
chr2 (466-522)||(9519719-9519775)
chr2 (466-522)||(19189849-19189905)
chr2 (467-515)||(26133532-26133580)
chr2 (466-522)||(29544627-29544683)
chr2 (466-522)||(31815892-31815948)
chr2 (465-513)||(41682401-41682449)
[»] chr7 (14 HSPs)
chr7 (466-522)||(34000262-34000318)
chr7 (466-513)||(21164772-21164819)
chr7 (466-521)||(27263341-27263396)
chr7 (466-521)||(27270235-27270290)
chr7 (466-516)||(7388050-7388100)
chr7 (465-515)||(23221391-23221441)
chr7 (466-516)||(36755015-36755064)
chr7 (466-516)||(36760812-36760861)
chr7 (463-512)||(37230043-37230092)
chr7 (465-522)||(37516807-37516864)
chr7 (467-512)||(40187651-40187696)
chr7 (468-513)||(44941427-44941472)
chr7 (490-522)||(23374635-23374667)
chr7 (466-506)||(35763705-35763745)
[»] chr6 (14 HSPs)
chr6 (466-522)||(8629701-8629757)
chr6 (467-512)||(9977058-9977103)
chr6 (466-522)||(788866-788922)
chr6 (467-522)||(6503261-6503316)
chr6 (466-513)||(11713666-11713713)
chr6 (488-522)||(10018421-10018455)
chr6 (466-512)||(17177961-17178007)
chr6 (492-522)||(23635719-23635749)
chr6 (465-522)||(12459746-12459803)
chr6 (465-522)||(26548250-26548307)
chr6 (466-522)||(8569709-8569765)
chr6 (466-522)||(16390429-16390485)
chr6 (466-522)||(24438287-24438343)
chr6 (466-506)||(32524441-32524481)
[»] chr5 (15 HSPs)
chr5 (466-518)||(40034397-40034449)
chr5 (462-522)||(4763191-4763251)
chr5 (465-521)||(37073774-37073830)
chr5 (460-515)||(27651542-27651597)
chr5 (466-512)||(1512855-1512901)
chr5 (467-521)||(18981195-18981249)
chr5 (466-512)||(39914901-39914947)
chr5 (465-522)||(38495141-38495198)
chr5 (463-515)||(13547444-13547496)
chr5 (466-522)||(17083598-17083654)
chr5 (466-522)||(27679498-27679554)
chr5 (466-514)||(31545871-31545919)
chr5 (466-522)||(32565524-32565580)
chr5 (466-510)||(36170055-36170099)
chr5 (466-522)||(39980508-39980564)
[»] chr4 (22 HSPs)
chr4 (466-522)||(36569173-36569229)
chr4 (466-512)||(2587715-2587761)
chr4 (466-522)||(29908056-29908112)
chr4 (466-521)||(6459930-6459985)
chr4 (466-513)||(52699373-52699420)
chr4 (460-515)||(56096198-56096253)
chr4 (466-512)||(13276129-13276175)
chr4 (460-522)||(20383482-20383544)
chr4 (466-512)||(28311476-28311522)
chr4 (468-522)||(39146644-39146698)
chr4 (464-514)||(43027290-43027340)
chr4 (467-513)||(45029619-45029665)
chr4 (465-515)||(47704581-47704631)
chr4 (467-512)||(27537749-27537794)
chr4 (466-522)||(14202484-14202540)
chr4 (460-512)||(19908686-19908738)
chr4 (458-522)||(22540811-22540875)
chr4 (466-522)||(32006500-32006556)
chr4 (490-522)||(36521497-36521529)
chr4 (466-522)||(43722765-43722821)
chr4 (466-522)||(49952574-49952630)
chr4 (466-522)||(50380841-50380897)
[»] chr3 (12 HSPs)
chr3 (466-521)||(53633623-53633678)
chr3 (466-522)||(7464496-7464552)
chr3 (466-520)||(26973361-26973415)
chr3 (492-522)||(36690038-36690068)
chr3 (460-506)||(55066621-55066667)
chr3 (463-516)||(22843461-22843514)
chr3 (465-522)||(38130964-38131021)
chr3 (489-521)||(7859498-7859530)
chr3 (466-522)||(8913713-8913769)
chr3 (466-506)||(19126549-19126589)
chr3 (469-521)||(45254234-45254286)
chr3 (466-522)||(48315029-48315085)
[»] scaffold0009 (1 HSPs)
scaffold0009 (466-505)||(63642-63681)
[»] scaffold1063 (1 HSPs)
scaffold1063 (466-512)||(1075-1121)
[»] scaffold0312 (1 HSPs)
scaffold0312 (490-520)||(7971-8001)
[»] scaffold0027 (1 HSPs)
scaffold0027 (466-512)||(61585-61631)
[»] scaffold0021 (1 HSPs)
scaffold0021 (465-522)||(161140-161197)
[»] scaffold0533 (1 HSPs)
scaffold0533 (466-506)||(8872-8912)
[»] scaffold0126 (1 HSPs)
scaffold0126 (460-512)||(34903-34955)


Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 14 - 385
Target Start/End: Complemental strand, 6474576 - 6474212
Alignment:
Q  14 ttctaaaaaacatgacttatcatttaaaagatctctatccaacttgaacttattatattctattgaatctattttgaatcattacatttcattgatcttc 113  Q
    ||||||||||||||||||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6474576 ttctaaaaaacatgacttatcatttaaaacatc------caacttgaacttattatattctattgaatctattttgaatcattacatttcattgatcttc 6474483  T
Q  114 acatacacctatcctcaaggtggtaataaaaagctcatataatactcataannnnnnnnattctttcatttagactttgatgtttaatgtatttggccca 213  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  6474482 acatacacctatcctcaaggtggtaataaaaagcttatataatactcataattttttt-attctttcatttagactttgatgtttaatgtatttggccca 6474384  T
Q  214 caacatcttacaaactagagcaacttacgttgcaaagactagatagctactttgtattagcataattgatcgcatgacatattgagtgttgcatatatat 313  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6474383 taacatcttacaaactagagcaacttacgttgcaaagactagatagctactttgtattagcataattgatcgcatgacatattgagcgttgcatatatat 6474284  T
Q  314 gatatgaatatgttgtttatgtgaataacaatatggatgttctctcagctagagaaggataaaatgatcgag 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6474283 gatatgaatatgttgtttatgtgaataacaatatggatgttctctcagctagagaaggataaaatgatcgag 6474212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 416 - 522
Target Start/End: Complemental strand, 6474181 - 6474075
Alignment:
Q  416 aaaatgtttaccagttttaatctcttatgaaaagctacaaagaagttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||| |||| ||||||| ||||| ||||||||| ||||||||    
T  6474181 aaaatgtttacgagttttaatcttttatgaaaagctacaaagaagtttacgtgagcttaacttaattagtacggacaatgcgtaatatatgcaaggttcg 6474082  T
Q  516 gagttca 522  Q
    | |||||    
T  6474081 gggttca 6474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 47719168 - 47719113
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||| || ||| ||||||||||||||||||| ||||||||||||||    
T  47719168 gtgagcttaactcagttggtaaggataatgcataatatatgcaaggttcggagttc 47719113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 520
Target Start/End: Complemental strand, 31759954 - 31759900
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagtt 520  Q
    |||||||||||||||||  || ||||||||||||||||||| ||||| |||||||    
T  31759954 gtgagcttaactcaattgatatggataatgcataatatatgcaaggtccggagtt 31759900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 520
Target Start/End: Complemental strand, 50849134 - 50849080
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagtt 520  Q
    |||||||||||||| || |||  || |||||||||||||||||||||||||||||    
T  50849134 gtgagcttaactcagttggtaatgacaatgcataatatatgtaaggttcggagtt 50849080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 515
Target Start/End: Original strand, 43843883 - 43843940
Alignment:
Q  458 aagttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    |||||||||||||||||||| | || ||| ||| ||||||||||||||| ||||||||    
T  43843883 aagttcatgtgagcttaacttagttggtaaggacaatgcataatatatgcaaggttcg 43843940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 514
Target Start/End: Complemental strand, 30678874 - 30678826
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttc 514  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||||    
T  30678874 gtgagcttaactcagttggtagggacaatgcataatatatgtaaggttc 30678826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 35473952 - 35474000
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttc 514  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  35473952 gtgagcttagctcaattggtaaggataatgcataatatatgcaaggttc 35474000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 510
Target Start/End: Complemental strand, 37944191 - 37944147
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||    
T  37944191 gtgagcttatctcaattggtaaggataatgcataatatatgtaag 37944147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 45677285 - 45677341
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||||||  || ||||||||||||| |||||||||||| ||||||||    
T  45677285 gtgagcttatctcaattgctaaggataatgcataacatatgtaaggtttggagttca 45677341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 9639878 - 9639823
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||| || ||| ||| ||||||||||||||| ||||| ||||||||    
T  9639878 gtgagcttaactcacttggtaaggacaatgcataatatatgcaaggtccggagttc 9639823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 510
Target Start/End: Original strand, 29042542 - 29042581
Alignment:
Q  471 cttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  29042542 cttaactcaattggtagggataatgcataatatatgtaag 29042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Complemental strand, 33153942 - 33153895
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||| || ||| ||| |||||||||||||||||||||    
T  33153942 tgtgagcttaactcagttggtagggacaatgcataatatatgtaaggt 33153895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 42146315 - 42146370
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||||||  |||| |||||  |||||||||| ||||||||||||||    
T  42146315 gtgagcttaactcaattgatacgaataatatataatatatgcaaggttcggagttc 42146370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 522
Target Start/End: Original strand, 47417788 - 47417839
Alignment:
Q  471 cttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||| ||  ||| ||||||||||||||| |||||||||||||||    
T  47417788 cttaactcaattggttaggacaatgcataatatatgcaaggttcggagttca 47417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 520
Target Start/End: Original strand, 422571 - 422601
Alignment:
Q  490 ataatgcataatatatgtaaggttcggagtt 520  Q
    |||||||||||||||||||||||||||||||    
T  422571 ataatgcataatatatgtaaggttcggagtt 422601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 25165153 - 25165107
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||| ||||||||||| ||| ||| |||||||||||||||||||||    
T  25165153 gtgagtttaactcaattggtatggacaatgcataatatatgtaaggt 25165107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 510
Target Start/End: Complemental strand, 12852264 - 12852219
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    |||||| |||||||| || ||| |||||||||||||||||||||||    
T  12852264 tgtgaggttaactcagttggtagggataatgcataatatatgtaag 12852219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 512
Target Start/End: Original strand, 31092666 - 31092707
Alignment:
Q  471 cttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||| || ||| |||||||||||||||||||||||||    
T  31092666 cttaactcatttggtaaggataatgcataatatatgtaaggt 31092707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 522
Target Start/End: Original strand, 2994750 - 2994814
Alignment:
Q  458 aagttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| ||||||||||| |||| |||||| ||| |||| |||||||||| ||||| ||| |||||    
T  2994750 aagttgatgtgagcttatctcagttcgtatggacaatgtataatatatgcaaggtccggggttca 2994814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 5270801 - 5270745
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || |||  |||||||||||||||||| || ||| ||||||||    
T  5270801 gtgagcttaactcagttagtagagataatgcataatatatgcaaagtttggagttca 5270745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 488 - 520
Target Start/End: Original strand, 10385310 - 10385342
Alignment:
Q  488 ggataatgcataatatatgtaaggttcggagtt 520  Q
    ||||||||||||||||||| |||||||||||||    
T  10385310 ggataatgcataatatatgcaaggttcggagtt 10385342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 12212295 - 12212335
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    |||||||||||||| || ||| |||||||||||||||||||    
T  12212295 gtgagcttaactcatttggtagggataatgcataatatatg 12212335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 13590110 - 13590166
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || ||  ||| ||||||||| |||||||||||||||||||||    
T  13590110 gtgagcttagctcagttggtttggacaatgcataaaatatgtaaggttcggagttca 13590166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 521
Target Start/End: Complemental strand, 50466385 - 50466329
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    ||||| |||||||||||| ||| |||||||| |||||||||  |||| |||||||||    
T  50466385 tgtgaccttaactcaattggtaaggataatgtataatatatacaagggtcggagttc 50466329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 45049574 - 45049631
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||||||| ||| ||||||||||||| ||||||||||||||| |||||    
T  45049574 tgtgagcttgactcaattggtatggataatgcataaaatatgtaaggttcggggttca 45049631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 12249546 - 12249490
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||| |||  ||||||| |||||||||| ||||||||| |||||    
T  12249546 gtgagcttaactcaattggtaaagataatgtataatatatgcaaggttcggtgttca 12249490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Complemental strand, 56866 - 56819
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  56866 tgtgagcttaactcaattggtatggacaatgcataatatatgcaaggt 56819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 515
Target Start/End: Original strand, 18959151 - 18959198
Alignment:
Q  468 gagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    |||||||||||||||  || ||||||||||||||||||| ||||||||    
T  18959151 gagcttaactcaattgttagggataatgcataatatatgcaaggttcg 18959198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 21557433 - 21557479
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||    
T  21557433 gtgagcttaactcagttagtatggacaatgcataatatatgtaaggt 21557479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 35682753 - 35682703
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    ||||||||| |||| || ||||||| ||| |||||||||||||||||||||    
T  35682753 gtgagcttagctcagttggtacggacaatccataatatatgtaaggttcgg 35682703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 37999481 - 37999435
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||| || ||| ||||||||||||||||||| |||||    
T  37999481 gtgagcttaactcagttggtatggataatgcataatatatgcaaggt 37999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 23159440 - 23159497
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| ||||||||||||| || ||| ||||||||||||||| ||| ||||| |||||    
T  23159440 tgtgaacttaactcaattcatatggacaatgcataatatatgcaagattcggggttca 23159497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 3650520 - 3650576
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || |||   | ||||||||||||||||||||||||| |||||    
T  3650520 gtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttca 3650576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 6447189 - 6447245
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| |||||||| || ||| ||| ||||||||||||||| ||||| |||||||||    
T  6447189 gtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggagttca 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 510
Target Start/End: Original strand, 15188899 - 15188943
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||    
T  15188899 gtgagcttaactcagttagtatggacaatgcataatatatgtaag 15188943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 468 - 521
Target Start/End: Complemental strand, 7772519 - 7772466
Alignment:
Q  468 gagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  7772519 gagcttaactcaattggtaaggataatgcataatatatgcaaggtccggagttc 7772466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 44026608 - 44026664
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||| ||| ||| || |||||||||||||||||||||| |||||    
T  44026608 gtgagcttaactcaattggtatggacaacgcataatatatgtaaggttcggggttca 44026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 31837997 - 31837947
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    |||| |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  31837997 gtgaacttaactcaattggtatggataatgtataatatatgtaaggttcgg 31837947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 36264541 - 36264484
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| || |||||| |||||    
T  36264541 tgtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttca 36264484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 521
Target Start/End: Original strand, 4238758 - 4238814
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||| |||| || ||| ||| ||||||||||||||||||||||||| ||||    
T  4238758 tgtgagcttagctcagttagtatggacaatgcataatatatgtaaggttcggggttc 4238814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Complemental strand, 5168639 - 5168584
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||| ||  || ||||||||||||||||||| ||||||||| |||||    
T  5168639 tgagcttaactcagttgatagggataatgcataatatatgcaaggttcggggttca 5168584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Original strand, 27152352 - 27152399
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||| || ||| ||||||||||||||||||| |||||    
T  27152352 tgtgagcttaactcagttggtagggataatgcataatatatgcaaggt 27152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 510
Target Start/End: Original strand, 14944160 - 14944206
Alignment:
Q  464 atgtgagcttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    |||||||||||||||| || ||| ||| |||||||||||||||||||    
T  14944160 atgtgagcttaactcacttagtaaggacaatgcataatatatgtaag 14944206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 18678137 - 18678183
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||||| |||  |||||| |||||||||||||||||    
T  18678137 gtgagcttaactcaattagtattgataatacataatatatgtaaggt 18678183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 20239343 - 20239389
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||||||  || ||||||||||||||||||| |||||    
T  20239343 gtgagcttaactcaattgatagggataatgcataatatatgcaaggt 20239389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 32091232 - 32091186
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  32091232 gtgagcttaactcaattggtaaggaaaatgcataatatatgcaaggt 32091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 520
Target Start/End: Original strand, 34977204 - 34977258
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagtt 520  Q
    |||||||||||||| || ||| ||| ||||||||||||||| ||||| |||||||    
T  34977204 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggagtt 34977258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 522
Target Start/End: Complemental strand, 44488045 - 44488015
Alignment:
Q  492 aatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||||||||||||||||    
T  44488045 aatgcataatatatgtaaggttcggagttca 44488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 511
Target Start/End: Original strand, 7640658 - 7640703
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaagg 511  Q
    ||||||||||||||||| ||| ||| ||| ||||||||||||||||    
T  7640658 gtgagcttaactcaattggtaaggacaatacataatatatgtaagg 7640703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 20120783 - 20120726
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||| |||| || ||| ||| ||||||||||||||| ||||||||| |||||    
T  20120783 tgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttca 20120726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 521
Target Start/End: Original strand, 28644524 - 28644581
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgt-aaggttcggagttc 521  Q
    ||||||||||||||| || ||| ||| |||||||||||||||| ||||||||| ||||    
T  28644524 tgtgagcttaactcagttggtagggacaatgcataatatatgtcaaggttcggggttc 28644581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 513
Target Start/End: Original strand, 4897542 - 4897590
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    ||||||||||||||| || ||| ||| ||||||||||||||| ||||||    
T  4897542 tgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtt 4897590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 513
Target Start/End: Original strand, 4944936 - 4944984
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    ||||||||||||||| || ||| ||| ||||||||||||||| ||||||    
T  4944936 tgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtt 4944984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 9519775 - 9519719
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||||||  || ||| ||||||||||||||| |||||||| ||||||    
T  9519775 gtgagcttagctcaattgatatggacaatgcataatatatgcaaggttcgaagttca 9519719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 19189905 - 19189849
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || ||| ||| |||| |||| ||||| |||||||||||||||    
T  19189905 gtgagcttaactcagttagtatggacaatgtataaaatatgcaaggttcggagttca 19189849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 26133580 - 26133532
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    ||||||||||||| || ||| ||| ||||||||||||||| ||||||||    
T  26133580 tgagcttaactcagttggtaaggacaatgcataatatatgcaaggttcg 26133532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 29544627 - 29544683
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| ||||||| ||| ||| ||||||||||||||| ||||| ||| |||||    
T  29544627 gtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttca 29544683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 31815948 - 31815892
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || ||| ||| ||||||||||||||| ||||| ||| |||||    
T  31815948 gtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttca 31815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 513
Target Start/End: Complemental strand, 41682449 - 41682401
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    ||||||||||||||| || |||   ||||||||||||||||||||||||    
T  41682449 tgtgagcttaactcagttggtataaataatgcataatatatgtaaggtt 41682401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 34000262 - 34000318
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||||||| |||||    
T  34000262 gtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttca 34000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Complemental strand, 21164819 - 21164772
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||    
T  21164819 gtgagcttaactcagttggtatggataatgcataatatatataaggtt 21164772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 27263341 - 27263396
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||| ||||||||| || ||| ||| ||||||||||||||| ||||||||||||||    
T  27263341 gtgaacttaactcagttggtatggacaatgcataatatatgcaaggttcggagttc 27263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Original strand, 27270235 - 27270290
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||| ||||||||| || ||| ||| ||||||||||||||| ||||||||||||||    
T  27270235 gtgaacttaactcagttggtatggacaatgcataatatatgcaaggttcggagttc 27270290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 7388100 - 7388050
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    |||||||||||||| || ||  ||| |||||||||||||||||||||||||    
T  7388100 gtgagcttaactcagttggttgggacaatgcataatatatgtaaggttcgg 7388050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 23221391 - 23221441
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    ||||||||||||||| || |||  || ||||||||||||||||||||||||    
T  23221391 tgtgagcttaactcagttggtagagacaatgcataatatatgtaaggttcg 23221441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 36755015 - 36755064
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  36755015 gtgagcttaactcagttggta-ggacaatgcataatatatgtaaggttcgg 36755064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 36760812 - 36760861
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  36760812 gtgagcttaactcagttggta-ggacaatgcataatatatgtaaggttcgg 36760861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Complemental strand, 37230092 - 37230043
Alignment:
Q  463 catgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||||| || ||| ||| ||||||||||||||| |||||    
T  37230092 catgtgagcttaactcagttggtaaggaaaatgcataatatatgcaaggt 37230043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 37516864 - 37516807
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||| || ||| ||| ||||||||| ||||| ||||| |||||||||    
T  37516864 tgtgagcttaactcagttagtatggacaatgcataacatatgcaaggtccggagttca 37516807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 512
Target Start/End: Complemental strand, 40187696 - 40187651
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||| || ||| ||| |||||||||||||||||||||    
T  40187696 tgagcttaactcagttggtagggacaatgcataatatatgtaaggt 40187651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 513
Target Start/End: Complemental strand, 44941472 - 44941427
Alignment:
Q  468 gagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    |||||||||||| || ||| ||||||||||||||||||| ||||||    
T  44941472 gagcttaactcagttggtagggataatgcataatatatgcaaggtt 44941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 490 - 522
Target Start/End: Complemental strand, 23374667 - 23374635
Alignment:
Q  490 ataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||||||||| ||||||||    
T  23374667 ataatgcataatatatgtaaggtttggagttca 23374635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 35763705 - 35763745
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  35763705 gtgagcttaactcagttcgtaaggacaatgcataatatatg 35763745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 8629757 - 8629701
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| ||||||||| |||||    
T  8629757 gtgagcttaactcaattggtatggacaatgcataatatatgcaaggttcggggttca 8629701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 512
Target Start/End: Original strand, 9977058 - 9977103
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  9977058 tgagcttaactcaattggtatggataatgcataatatatgcaaggt 9977103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 788866 - 788922
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || ||| ||| ||||||||||||||| |||||||||||||||    
T  788866 gtgagcttatctcagttggtaaggacaatgcataatatatgcaaggttcggagttca 788922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 522
Target Start/End: Original strand, 6503261 - 6503316
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||  || |||||||| ||||||||||||||||| || |||||    
T  6503261 tgagcttaactcaattgttaaggataatgtataatatatgtaaggtttggggttca 6503316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 11713666 - 11713713
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    |||||||||| |||||| ||| |||||||||||||||||| |||||||    
T  11713666 gtgagcttaaatcaattggtaaggataatgcataatatatataaggtt 11713713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 522
Target Start/End: Original strand, 10018421 - 10018455
Alignment:
Q  488 ggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||||||||||||||| |||||    
T  10018421 ggataatgcataatatatgtaaggttcggggttca 10018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 17178007 - 17177961
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  17178007 gtgagcttagctcaattagtaaggaaaatgcataatatatgtaaggt 17177961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 522
Target Start/End: Complemental strand, 23635749 - 23635719
Alignment:
Q  492 aatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||||||||||||||||    
T  23635749 aatgcataatatatgtaaggttcggagttca 23635719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 12459803 - 12459746
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||| || | || ||| | ||||||||||||||||||||||||||| |||||    
T  12459803 tgtgagcttatcttagtttgtatgaataatgcataatatatgtaaggttcggggttca 12459746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 26548250 - 26548307
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||| ||| | | |||| |||||||||| ||||||||| |||||    
T  26548250 tgtgagcttaactcaattagtatgaacaatgtataatatatgcaaggttcggggttca 26548307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 8569709 - 8569765
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| ||||||||||| ||| ||| ||||||||||||||| ||||| ||| |||||    
T  8569709 gtgagtttaactcaattggtatggacaatgcataatatatgcaaggtccggggttca 8569765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 16390429 - 16390485
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || ||| ||| ||||||||||||||||||||| ||| |||||    
T  16390429 gtgagcttacctcagttggtagggacaatgcataatatatgtaaggtccggggttca 16390485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 24438343 - 24438287
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||| ||||||||| || ||| | |||||||||||||||||||| |||||| |||||    
T  24438343 gtgaacttaactcagttggtaagaataatgcataatatatgtaaagttcggggttca 24438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 32524481 - 32524441
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  32524481 gtgagcttaactcaattggtagggacaatgcataatatatg 32524441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 518
Target Start/End: Complemental strand, 40034449 - 40034397
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggag 518  Q
    ||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||    
T  40034449 gtgagcttagctcaattcgtatggacaatgtataatatatgtaaggttcggag 40034397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 522
Target Start/End: Complemental strand, 4763251 - 4763191
Alignment:
Q  462 tcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| ||||||||||| |||  || ||||||||||||||||||||| ||| |||||    
T  4763251 tcatgtgagtttaactcaattggtaaagacaatgcataatatatgtaaggtccggggttca 4763191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 521
Target Start/End: Complemental strand, 37073830 - 37073774
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||| ||||||||||| ||| |||  |||||||||||||||||||||||| ||||    
T  37073830 tgtgagattaactcaattggtatggactatgcataatatatgtaaggttcggggttc 37073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 27651597 - 27651542
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    |||| ||||||||||||| | || ||| ||| ||||||||||||||||||||||||    
T  27651597 gttcttgtgagcttaacttagttggtaaggacaatgcataatatatgtaaggttcg 27651542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 1512855 - 1512901
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||    
T  1512855 gtgagcttaactcagttagtagggacaatgcataatatatgtaaggt 1512901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 18981249 - 18981195
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||| | ||| | | ||||||||||||||||||||||||| ||||    
T  18981249 tgagcttaactcaaatggtaagaacaatgcataatatatgtaaggttcggggttc 18981195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 39914901 - 39914947
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  39914901 gtgagcttaactcaattggtaaggacaatgcataatatatgcaaggt 39914947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 38495141 - 38495198
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| ||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||    
T  38495141 tgtgaacttaactcagttggtatggataatgcataaaatatgcaaggttcggggttca 38495198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 13547444 - 13547496
Alignment:
Q  463 catgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    ||||| || ||| ||||||| ||| |||||||||||||| |||||||||||||    
T  13547444 catgtaagtttagctcaattggtaaggataatgcataatgtatgtaaggttcg 13547496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 17083654 - 17083598
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||| || ||||| | ||| |||||||||||||||||||||||||  ||||||||    
T  17083654 gtgagcatagctcaactagtagggataatgcataatatatgtaaggtctggagttca 17083598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 27679498 - 27679554
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || |||  |||||||||||||||||| ||||||||| |||||    
T  27679498 gtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcggggttca 27679554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 514
Target Start/End: Original strand, 31545871 - 31545919
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttc 514  Q
    |||||||||||||| || ||  ||||||||||||||||||| |||||||    
T  31545871 gtgagcttaactcagttggttaggataatgcataatatatgcaaggttc 31545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 32565524 - 32565580
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| ||||  | ||| ||||||||||||||||||||||||| || ||||||    
T  32565524 gtgagcttagctcagctggtagggataatgcataatatatgtaaggtccgaagttca 32565580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 510
Target Start/End: Original strand, 36170055 - 36170099
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaag 510  Q
    |||||||||||||||||  || | |||||||||||||||||||||    
T  36170055 gtgagcttaactcaattgctaggaataatgcataatatatgtaag 36170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 39980508 - 39980564
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || ||| ||||||||||||| ||||| ||||| |||||||||    
T  39980508 gtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagttca 39980564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 36569173 - 36569229
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| ||||||| ||| | | |||||||||||||||||||||||||||||||    
T  36569173 gtgagcttagctcaattagtatgaaaaatgcataatatatgtaaggttcggagttca 36569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 2587761 - 2587715
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  2587761 gtgagcttagctcaattggtatggataatgcataatatatgtaaggt 2587715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 29908056 - 29908112
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || ||| ||| ||||||||||||||| ||||| |||||||||    
T  29908056 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttca 29908112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 6459985 - 6459930
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||| ||  || ||| ||||||||||||||||||||| ||||||||    
T  6459985 gtgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttc 6459930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 513
Target Start/End: Original strand, 52699373 - 52699420
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    ||||||||| ||||||| ||| | ||||||||||||||||||||||||    
T  52699373 gtgagcttatctcaattagtaagaataatgcataatatatgtaaggtt 52699420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 56096198 - 56096253
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    |||||||| ||||||||||| ||  || ||| ||||||||||||||||||||||||    
T  56096198 gttcatgtaagcttaactcagttgataaggacaatgcataatatatgtaaggttcg 56096253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 13276129 - 13276175
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  13276129 gtgagcttaactcaattggtagggacaatgcataatatatgcaaggt 13276175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 522
Target Start/End: Original strand, 20383482 - 20383544
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||| |||| || ||| ||| ||||||||||||||| ||||| ||| |||||    
T  20383482 gttcatgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttca 20383544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 28311476 - 28311522
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||||||  ||||||| ||| |||||||||||||||||||||||||    
T  28311476 gtgagctttgctcaattagtaaggataatgcataatatatgtaaggt 28311522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 522
Target Start/End: Original strand, 39146644 - 39146698
Alignment:
Q  468 gagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||| ||  || ||| ||||||||||||| |||||||||||||||||    
T  39146644 gagcttaactcagttgatatggacaatgcataatataagtaaggttcggagttca 39146698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 43027290 - 43027340
Alignment:
Q  464 atgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttc 514  Q
    ||||||||||| ||||||| |||  |||||||||||||||||| |||||||    
T  43027290 atgtgagcttagctcaattggtagtgataatgcataatatatgcaaggttc 43027340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 513
Target Start/End: Complemental strand, 45029665 - 45029619
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggtt 513  Q
    ||||||||||||| || ||| ||| ||||||||||||||||||||||    
T  45029665 tgagcttaactcatttggtaaggacaatgcataatatatgtaaggtt 45029619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 47704581 - 47704631
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcg 515  Q
    ||||||||||||||| || ||| | |||||| |||||||||||||||||||    
T  47704581 tgtgagcttaactcagttggtatgaataatgtataatatatgtaaggttcg 47704631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 512
Target Start/End: Original strand, 27537749 - 27537794
Alignment:
Q  467 tgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||||| ||| ||| ||||||||||||||| |||||    
T  27537749 tgagcttaactcaattggtatggacaatgcataatatatgcaaggt 27537794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 14202540 - 14202484
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| ||  |  ||||||||||||||||||||||||| ||| |||||    
T  14202540 gtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttca 14202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 460 - 512
Target Start/End: Original strand, 19908686 - 19908738
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||| ||||||||||||||| || ||| ||| ||||||||||||||| |||||    
T  19908686 gttcctgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 19908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 522
Target Start/End: Complemental strand, 22540875 - 22540811
Alignment:
Q  458 aagttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||| ||| ||||||| ||| ||| || |||||||||||| |||||| || |||||    
T  22540875 aagttcatgtgagtttatctcaattggtatggacaacgcataatatatggaaggtttggggttca 22540811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 32006500 - 32006556
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| ||| |||| || ||| |||||||||||||||||||||| |||||| |||||    
T  32006500 gtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttca 32006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 490 - 522
Target Start/End: Original strand, 36521497 - 36521529
Alignment:
Q  490 ataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||||||||||||| |||||||    
T  36521497 ataatgcataatatatgtaaggttcagagttca 36521529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Original strand, 43722765 - 43722821
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||| |||||||| || ||| ||| ||||||||||||||||||||| ||| |||||    
T  43722765 gtgagtttaactcagttggtatggacaatgcataatatatgtaaggtccggggttca 43722821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 49952630 - 49952574
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||  |  ||| ||||||||||||||||||||| ||| |||||    
T  49952630 gtgagcttaactcaattgatttggacaatgcataatatatgtaaggtccggggttca 49952574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 50380897 - 50380841
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||| ||| || ||| | | ||||||||||||||||||||| |||||||||    
T  50380897 gtgagcttaattcagttggtatgaacaatgcataatatatgtaaggtccggagttca 50380841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 466 - 521
Target Start/End: Complemental strand, 53633678 - 53633623
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||| ||| ||||    
T  53633678 gtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttc 53633623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 7464552 - 7464496
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || ||| ||| ||||||||||||||||||||| ||| |||||    
T  7464552 gtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttca 7464496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 520
Target Start/End: Original strand, 26973361 - 26973415
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagtt 520  Q
    |||| ||||| | |||| ||| ||| |||||||||||||||||||||||||||||    
T  26973361 gtgaacttaattaaattggtaaggacaatgcataatatatgtaaggttcggagtt 26973415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 522
Target Start/End: Original strand, 36690038 - 36690068
Alignment:
Q  492 aatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||||||||||||||||||||    
T  36690038 aatgcataatatatgtaaggttcggagttca 36690068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 506
Target Start/End: Complemental strand, 55066667 - 55066621
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    |||| |||||||||| |||| || |||||||||||||||||||||||    
T  55066667 gttcttgtgagcttagctcagttggtacggataatgcataatatatg 55066621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Original strand, 22843461 - 22843514
Alignment:
Q  463 catgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcgg 516  Q
    |||||||||||| |||| || |||  || |||||||||||||||||||||||||    
T  22843461 catgtgagcttagctcagttagtaaagacaatgcataatatatgtaaggttcgg 22843514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 38131021 - 38130964
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||| || ||| ||| ||||||||||||||| ||||| ||| |||||    
T  38131021 tgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttca 38130964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 489 - 521
Target Start/End: Complemental strand, 7859530 - 7859498
Alignment:
Q  489 gataatgcataatatatgtaaggttcggagttc 521  Q
    |||||||||||||||||||||||||||| ||||    
T  7859530 gataatgcataatatatgtaaggttcggggttc 7859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 8913769 - 8913713
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    |||||||||||||| || ||| | | |||||||||| |||| |||||||||||||||    
T  8913769 gtgagcttaactcagtttgtaggaacaatgcataatgtatgcaaggttcggagttca 8913713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 19126549 - 19126589
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    |||||||||||||| || ||| |||||||||||||||||||    
T  19126549 gtgagcttaactcagttagtaaggataatgcataatatatg 19126589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 521
Target Start/End: Original strand, 45254234 - 45254286
Alignment:
Q  469 agcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttc 521  Q
    |||||| |||| || ||| ||| |||||||||||||||||||||| |||||||    
T  45254234 agcttagctcagttggtaaggacaatgcataatatatgtaaggtttggagttc 45254286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 522
Target Start/End: Complemental strand, 48315085 - 48315029
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||| |||| || ||| ||||||||||||||||||| ||||| ||| |||||    
T  48315085 gtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttca 48315029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 466 - 505
Target Start/End: Complemental strand, 63681 - 63642
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatat 505  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  63681 gtgagcttaactcaattggtatggataatgcataatatat 63642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 1121 - 1075
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||| || ||| ||| |||||||||||||||||||||    
T  1121 gtgagcttaactcagttagtagggacaatgcataatatatgtaaggt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 520
Target Start/End: Complemental strand, 8001 - 7971
Alignment:
Q  490 ataatgcataatatatgtaaggttcggagtt 520  Q
    |||||||||||||||||||||||||||||||    
T  8001 ataatgcataatatatgtaaggttcggagtt 7971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 61631 - 61585
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||    
T  61631 gtgagcttaactcagttggtaaggataatgcataatgtatgtaaggt 61585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 522
Target Start/End: Original strand, 161140 - 161197
Alignment:
Q  465 tgtgagcttaactcaattcgtacggataatgcataatatatgtaaggttcggagttca 522  Q
    ||||||||||||||| || ||| ||| ||||||||| ||||| ||||||||| |||||    
T  161140 tgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttca 161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 8912 - 8872
Alignment:
Q  466 gtgagcttaactcaattcgtacggataatgcataatatatg 506  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  8912 gtgagcttaactcaattggtaaggacaatgcataatatatg 8872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 460 - 512
Target Start/End: Complemental strand, 34955 - 34903
Alignment:
Q  460 gttcatgtgagcttaactcaattcgtacggataatgcataatatatgtaaggt 512  Q
    ||||| |||||||||||||| || ||| ||| ||||||||||||||| |||||    
T  34955 gttcacgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggt 34903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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