View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7566_low_14 (Length: 406)
Name: NF7566_low_14
Description: NF7566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7566_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 18 - 403
Target Start/End: Complemental strand, 2427576 - 2427191
Alignment:
| Q |
18 |
gaaccaaaagcttcaaattttgctgtcaaagagtttttcattcatcctaatgataatgttccgttggcgaaaaatcatgtggtcgatgattcagctggtt |
117 |
Q |
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| T |
2427576 |
gaaccaaaagcttcaaattttgctgtcaaagagtttttcattcatcccaatgataatgttccgttggtgaaaaatcatgtggtcgatgattcagctggtt |
2427477 |
T |
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| Q |
118 |
tgttatctgagaattgtgaagaggttgttggtggcgaagttgttgatagtttctcagaaaaattgcacttgcacatagaggaggtttcggagaagctcaa |
217 |
Q |
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| T |
2427476 |
tgttatctgagaattgtgaagaggttgttggtggcgaagttgttgatagtttctcagaaaaattgcacttccacatagaggaggtttcggagaagctcaa |
2427377 |
T |
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| Q |
218 |
gaattcggaacaagaggttgtcaatgggaaaattgatgataatttctcggaaaatttgtgcgaagaagatgtttcggataaactcaagaatttaagggaa |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |
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| T |
2427376 |
gaattcggaacaagaggttgtcaatgggaaaattgatgataatttctcagaaaatttgcgcgaagaagatgtttcagataaactcaagaatttaagggaa |
2427277 |
T |
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| Q |
318 |
ccttgtgtgcgtaattttctttctgatgatgatttcatttgttcgagctcggatacagattctataagttctttggatgatggttt |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2427276 |
ccttgtgtgcgtaattttctttctgatgatgatttcatttgttcgagctcggatacagattctataagttctttggatgatggttt |
2427191 |
T |
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