View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7569_high_12 (Length: 362)
Name: NF7569_high_12
Description: NF7569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7569_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 4664667 - 4664999
Alignment:
| Q |
20 |
agaccatgttggtttcaccatttcaaaatttaataaatgaaccaactaaatttatttaatttctcatgattcttccatttacatggatcctttacagcat |
119 |
Q |
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| T |
4664667 |
agaccatgttggtttcaccatttcaaaatttaataaatgaaccaactaaatttatttaatttctcacgattcttccatttacatggatcctttacagcat |
4664766 |
T |
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| Q |
120 |
cgtagatatgcagattataagagagattctggaaaaagagaaattggataatatatcttcaataaaaccatacaagttttgtcaagaaaaaggaaaatc- |
218 |
Q |
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| T |
4664767 |
cgtagatatgcagattataagagagattctggaaaaagagaaattggataatatatcttcaataaaaccatacaagttatgtcaagaaaaaggaaaatca |
4664866 |
T |
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| Q |
219 |
-------atgtatctaacgatatgtaacctatacacaagttacttcacaccaaaaagaagaaacactacgtgcatattaattataatgaatcatatttta |
311 |
Q |
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| T |
4664867 |
taccagtatgtatctaacgatatgtaacctatacacaagttacttcacaccaaaaagaagaaacactacgtgcatattaattataatgaatcatatttta |
4664966 |
T |
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| Q |
312 |
cataacacatttacaaatttatataggtatctc |
344 |
Q |
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| T |
4664967 |
cataacacatttacaaatttatataggtatctc |
4664999 |
T |
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