View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7569_high_14 (Length: 335)
Name: NF7569_high_14
Description: NF7569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7569_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 10 - 314
Target Start/End: Original strand, 32726758 - 32727066
Alignment:
| Q |
10 |
aagaatataatatttgaaaatgactgtcggcttagaccaaattcaattcaaatttgaacccgcgggaccaacatcccttaattcattacattacaacaat |
109 |
Q |
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| T |
32726758 |
aagaaaataatatttgaaaatgactgtcggcttagaccaaattcaattcaaatttgaacccgcaggaccaacatcccttaattcattacattacaacaat |
32726857 |
T |
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| Q |
110 |
actattagtatttatctttctttgttgtcagatattcttgaatacaaaagtcccatgcttcctttgttcaaggccccaccttacagcacgagcctaacaa |
209 |
Q |
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| T |
32726858 |
actattagtatttatctttctttgttgtcagatattcttgaatacaaaagtcccatgcttcctttgttcaaggccccaccttacagcacgagcctaacaa |
32726957 |
T |
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| Q |
210 |
acattagacaaatatatcagagccattgaattaagaaaccaagcgtccaagcttattattttcatcaaggctggtat----agactatagctagtttaat |
305 |
Q |
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|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32726958 |
acattagacaaatatatcagaggcattgaattgagaaaccaagcgtccaagcttattattttcatcaaggctggtatagacagactatagctagtttaat |
32727057 |
T |
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| Q |
306 |
ttactgagt |
314 |
Q |
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||||||||| |
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| T |
32727058 |
ttactgagt |
32727066 |
T |
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