View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7569_low_13 (Length: 359)
Name: NF7569_low_13
Description: NF7569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7569_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 4 - 339
Target Start/End: Complemental strand, 36439418 - 36439083
Alignment:
| Q |
4 |
atcagattagaattttaagtgtgagtgtctccgtgaacttaattcaattgatatgaattaatatggataattcattatttatataggatcagagttcgaa |
103 |
Q |
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| T |
36439418 |
atcatattagaattttaagtgtgagtgtctccgtgaacttaattcaattgatatagattaatatggataattcattatttatataggatcagagttcgaa |
36439319 |
T |
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| Q |
104 |
cttcaaacatcttacttaatcaccttaagaaaagatgaatatttaagtttgaatgataaccttaggcgaactatatttgtgttaaataaaagatataaaa |
203 |
Q |
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| T |
36439318 |
cttcaaacaccttacttaatcaccttaagaaaagatgaatatttaagtgtgaatgataaccttacgcggactataattgtgttaaataaaagatataaaa |
36439219 |
T |
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| Q |
204 |
taagtgaatcatatacttcatctcctacaaattttggtggatatgcggtggcaatgacccttaagagatctcatagatcttttttagtaggaaaatgtca |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36439218 |
taagtgaatcatatacttcatctcctacaaattttggtggatatgcggtggcaatgacccttaagagatctcatagatcttttttagtaggaaaatgtca |
36439119 |
T |
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| Q |
304 |
agaattgatatgtttaaggaggtggacatacacgtg |
339 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36439118 |
ggaattgatatgtttaaggaggtggacatacacgtg |
36439083 |
T |
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