View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7569_low_9 (Length: 379)
Name: NF7569_low_9
Description: NF7569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7569_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 5 - 360
Target Start/End: Original strand, 36439603 - 36439954
Alignment:
| Q |
5 |
agtcatatagataggatagcctcataaattaaatattactttctgttttctacttaatgtaaaactcgtaacatttccactctatttaagagtaagcatc |
104 |
Q |
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| T |
36439603 |
agtcgtataaataggatagtctcataaatcaaatactactttctgttttctactcaatgtgaaactcgtaacatttccactctatttaagagtaagcatc |
36439702 |
T |
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| Q |
105 |
ctttgcggattttactttatcaggctcatcggggtggtagtcatttctctcttttgaggtttcgctcatctatcactattcaactatgaatcttaatcca |
204 |
Q |
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| T |
36439703 |
ctttgcggattttactttatcaggctcatcggggtggtagtcatttctctcttttgaggtttcgctaatctatcactattcaactatgaatcttaatcca |
36439802 |
T |
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| Q |
205 |
agctaaaggtagtgttttcatgttttcaactctcaacaaaaacatcaattgctatattttaagcacatgacgagatctcaattcaaatgactagttcatt |
304 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36439803 |
agctaaaggtagtgttttcatgttttcaa--ctcaacaaaaacatcaattgctatattttaagcacatgacgagatctcaattcaaatgactagttcatt |
36439900 |
T |
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| Q |
305 |
agatatacttgaacagacactctcatcttggcacaccaaataatttgtggatgttg |
360 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
36439901 |
agatatacttgaacagaca--ctcatcttggcacaccaaataatttgtggatgttg |
36439954 |
T |
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