View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7572_low_3 (Length: 217)

Name: NF7572_low_3
Description: NF7572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7572_low_3
NF7572_low_3
[»] chr2 (48 HSPs)
chr2 (13-199)||(27149173-27149359)
chr2 (47-191)||(2869605-2869750)
chr2 (47-193)||(34682246-34682393)
chr2 (47-191)||(31056084-31056227)
chr2 (47-193)||(14698922-14699066)
chr2 (47-191)||(21629983-21630129)
chr2 (47-177)||(15903803-15903932)
chr2 (47-199)||(28770687-28770839)
chr2 (47-193)||(33118174-33118319)
chr2 (46-193)||(8040098-8040248)
chr2 (47-193)||(8390062-8390209)
chr2 (47-193)||(13569366-13569513)
chr2 (85-193)||(10445394-10445503)
chr2 (47-193)||(17865241-17865389)
chr2 (47-187)||(18674313-18674454)
chr2 (85-193)||(20522258-20522367)
chr2 (47-199)||(2837943-2838095)
chr2 (47-195)||(39482967-39483117)
chr2 (47-195)||(10707165-10707313)
chr2 (47-189)||(35397554-35397694)
chr2 (47-193)||(34388896-34389035)
chr2 (143-193)||(3491788-3491838)
chr2 (143-193)||(25398533-25398583)
chr2 (143-193)||(25403671-25403721)
chr2 (143-193)||(25407660-25407710)
chr2 (145-193)||(28259188-28259236)
chr2 (52-190)||(40014966-40015104)
chr2 (143-193)||(9296410-9296460)
chr2 (143-193)||(11098936-11098986)
chr2 (143-193)||(14291526-14291576)
chr2 (86-195)||(23078422-23078531)
chr2 (85-187)||(33528576-33528674)
chr2 (47-190)||(42039581-42039725)
chr2 (157-193)||(2736315-2736351)
chr2 (157-193)||(2741051-2741087)
chr2 (113-189)||(16388449-16388525)
chr2 (157-193)||(17462546-17462582)
chr2 (147-191)||(40738882-40738926)
chr2 (157-193)||(45679833-45679869)
chr2 (118-193)||(16940193-16940268)
chr2 (118-193)||(17010858-17010933)
chr2 (158-193)||(33671002-33671037)
chr2 (158-192)||(20050058-20050092)
chr2 (109-158)||(11151671-11151722)
chr2 (85-158)||(11690515-11690589)
chr2 (157-193)||(39680155-39680191)
chr2 (157-193)||(39687093-39687129)
chr2 (85-158)||(42362366-42362440)
[»] chr5 (33 HSPs)
chr5 (48-198)||(33030854-33031004)
chr5 (47-199)||(7160817-7160968)
chr5 (47-190)||(2630272-2630415)
chr5 (47-193)||(10281789-10281936)
chr5 (47-192)||(11181745-11181890)
chr5 (47-198)||(6741885-6742036)
chr5 (47-190)||(19588787-19588929)
chr5 (86-195)||(12084127-12084236)
chr5 (45-187)||(3880343-3880486)
chr5 (85-195)||(11916922-11917033)
chr5 (47-193)||(42127323-42127469)
chr5 (47-193)||(28832297-28832441)
chr5 (143-193)||(38192211-38192261)
chr5 (143-193)||(38219436-38219486)
chr5 (145-193)||(9353343-9353391)
chr5 (145-193)||(15464570-15464618)
chr5 (86-193)||(17003911-17004019)
chr5 (145-193)||(36932361-36932409)
chr5 (143-193)||(35387700-35387750)
chr5 (86-191)||(14520270-14520375)
chr5 (49-190)||(34842644-34842785)
chr5 (157-193)||(1170921-1170957)
chr5 (162-193)||(4410236-4410267)
chr5 (158-193)||(22672946-22672981)
chr5 (158-193)||(25445608-25445643)
chr5 (158-193)||(35385487-35385522)
chr5 (143-193)||(24135886-24135936)
chr5 (143-193)||(30631444-30631493)
chr5 (143-193)||(31180252-31180301)
chr5 (146-195)||(15044722-15044770)
chr5 (84-158)||(33831693-33831768)
chr5 (167-195)||(31401871-31401899)
chr5 (163-191)||(36263849-36263877)
[»] chr8 (42 HSPs)
chr8 (47-199)||(9054750-9054902)
chr8 (48-189)||(3051162-3051303)
chr8 (47-193)||(5990474-5990619)
chr8 (47-193)||(6127259-6127407)
chr8 (77-191)||(6813723-6813838)
chr8 (85-189)||(23799527-23799632)
chr8 (47-199)||(28307593-28307746)
chr8 (86-195)||(7412377-7412486)
chr8 (47-173)||(7493086-7493212)
chr8 (132-193)||(18853166-18853227)
chr8 (132-193)||(18870560-18870621)
chr8 (85-193)||(26403180-26403289)
chr8 (46-195)||(5702393-5702544)
chr8 (143-193)||(1261963-1262013)
chr8 (47-191)||(19752306-19752451)
chr8 (143-193)||(31071238-31071288)
chr8 (86-193)||(4456066-4456173)
chr8 (143-195)||(4760084-4760136)
chr8 (147-193)||(26287939-26287985)
chr8 (147-193)||(26301196-26301242)
chr8 (147-193)||(26313190-26313236)
chr8 (143-193)||(36979415-36979465)
chr8 (77-156)||(8863569-8863646)
chr8 (145-193)||(19175765-19175813)
chr8 (143-193)||(10689152-10689202)
chr8 (143-193)||(30655684-30655734)
chr8 (47-81)||(31513245-31513279)
chr8 (157-193)||(16757303-16757339)
chr8 (157-193)||(25684753-25684789)
chr8 (158-193)||(28890877-28890912)
chr8 (158-193)||(29554820-29554855)
chr8 (47-139)||(4696521-4696612)
chr8 (155-193)||(4696617-4696655)
chr8 (157-191)||(4812525-4812559)
chr8 (163-193)||(9765848-9765878)
chr8 (109-191)||(11771981-11772063)
chr8 (143-193)||(33037816-33037865)
chr8 (162-195)||(18813151-18813184)
chr8 (162-195)||(24873213-24873246)
chr8 (157-193)||(28328018-28328054)
chr8 (85-158)||(30291620-30291695)
chr8 (162-190)||(44721113-44721141)
[»] chr7 (37 HSPs)
chr7 (47-191)||(5817183-5817327)
chr7 (84-199)||(28617175-28617290)
chr7 (47-193)||(2647610-2647755)
chr7 (47-192)||(3047294-3047438)
chr7 (47-191)||(29159843-29159989)
chr7 (47-191)||(55987-56133)
chr7 (85-191)||(46516260-46516367)
chr7 (47-193)||(49091699-49091847)
chr7 (47-193)||(20284127-20284273)
chr7 (47-193)||(33332363-33332509)
chr7 (47-193)||(2580428-2580574)
chr7 (143-193)||(21639846-21639896)
chr7 (86-193)||(44848636-44848743)
chr7 (85-193)||(35960854-35960963)
chr7 (47-193)||(4796581-4796726)
chr7 (47-193)||(9189920-9190067)
chr7 (143-191)||(18413679-18413727)
chr7 (47-190)||(23402926-23403069)
chr7 (146-193)||(21983322-21983369)
chr7 (143-193)||(2058003-2058053)
chr7 (143-193)||(18408801-18408851)
chr7 (143-193)||(1533453-1533503)
chr7 (157-193)||(3320086-3320122)
chr7 (157-193)||(3324834-3324870)
chr7 (143-187)||(21646050-21646094)
chr7 (157-193)||(25405503-25405539)
chr7 (158-193)||(2121011-2121046)
chr7 (47-122)||(45685658-45685733)
chr7 (147-193)||(9185178-9185224)
chr7 (143-193)||(20357557-20357606)
chr7 (145-186)||(2479381-2479422)
chr7 (162-195)||(7351684-7351717)
chr7 (47-139)||(9235495-9235588)
chr7 (158-199)||(21369754-21369795)
chr7 (153-186)||(47263721-47263754)
chr7 (157-193)||(7069890-7069926)
chr7 (157-193)||(7074897-7074933)
[»] chr4 (39 HSPs)
chr4 (47-199)||(1983214-1983365)
chr4 (47-199)||(5112269-5112421)
chr4 (47-199)||(39774218-39774370)
chr4 (47-188)||(37781905-37782047)
chr4 (47-199)||(18377391-18377543)
chr4 (85-193)||(10047417-10047526)
chr4 (47-199)||(34670578-34670727)
chr4 (47-189)||(16623205-16623348)
chr4 (47-193)||(38152350-38152498)
chr4 (86-193)||(36315181-36315288)
chr4 (86-193)||(36329390-36329497)
chr4 (85-195)||(3796469-3796580)
chr4 (47-180)||(18912276-18912409)
chr4 (47-193)||(24333847-24333995)
chr4 (133-198)||(34495822-34495887)
chr4 (143-191)||(31985643-31985691)
chr4 (118-189)||(16630664-16630735)
chr4 (47-188)||(42599487-42599626)
chr4 (47-191)||(54867223-54867364)
chr4 (47-190)||(6743327-6743471)
chr4 (143-193)||(24741978-24742028)
chr4 (143-193)||(29760679-29760729)
chr4 (131-193)||(39246032-39246094)
chr4 (86-189)||(5396623-5396726)
chr4 (47-189)||(3777591-3777733)
chr4 (146-193)||(5143297-5143344)
chr4 (46-139)||(25861946-25862038)
chr4 (48-199)||(39593761-39593910)
chr4 (147-193)||(5269204-5269250)
chr4 (147-189)||(28468542-28468584)
chr4 (157-193)||(11853659-11853695)
chr4 (158-193)||(18587078-18587113)
chr4 (47-97)||(36175242-36175290)
chr4 (157-191)||(55822375-55822409)
chr4 (85-193)||(5147715-5147824)
chr4 (158-199)||(5336809-5336850)
chr4 (158-191)||(10113134-10113167)
chr4 (158-195)||(13072014-13072051)
chr4 (47-187)||(873431-873571)
[»] chr1 (36 HSPs)
chr1 (45-192)||(22819468-22819615)
chr1 (47-199)||(32736909-32737061)
chr1 (47-193)||(47703848-47703995)
chr1 (47-191)||(17345432-17345576)
chr1 (47-153)||(35109450-35109556)
chr1 (85-193)||(16124466-16124575)
chr1 (47-193)||(29651849-29651997)
chr1 (84-180)||(9023789-9023885)
chr1 (47-193)||(13598436-13598584)
chr1 (85-193)||(19072966-19073075)
chr1 (85-193)||(19120856-19120965)
chr1 (124-193)||(27104362-27104431)
chr1 (143-195)||(19358852-19358904)
chr1 (143-195)||(19361441-19361493)
chr1 (143-195)||(19380081-19380133)
chr1 (145-193)||(21536580-21536628)
chr1 (85-191)||(9476301-9476408)
chr1 (143-193)||(24202778-24202828)
chr1 (86-193)||(3281746-3281853)
chr1 (86-193)||(26644849-26644956)
chr1 (47-193)||(32889477-32889624)
chr1 (47-189)||(918392-918535)
chr1 (47-193)||(47098738-47098883)
chr1 (145-195)||(13604634-13604684)
chr1 (47-161)||(40816729-40816841)
chr1 (46-93)||(11031386-11031433)
chr1 (84-171)||(11032270-11032357)
chr1 (110-177)||(48382457-48382524)
chr1 (46-156)||(10997031-10997141)
chr1 (47-87)||(9022817-9022857)
chr1 (145-193)||(37069808-37069856)
chr1 (146-193)||(775710-775757)
chr1 (158-193)||(21353383-21353418)
chr1 (158-199)||(9314672-9314713)
chr1 (158-195)||(9521827-9521864)
chr1 (47-139)||(8281410-8281502)
[»] chr3 (59 HSPs)
chr3 (68-199)||(4386851-4386982)
chr3 (47-193)||(18552787-18552932)
chr3 (47-191)||(40844691-40844834)
chr3 (47-193)||(8370390-8370535)
chr3 (47-193)||(25795819-25795964)
chr3 (47-189)||(21353604-21353746)
chr3 (85-193)||(1736245-1736354)
chr3 (47-193)||(48438252-48438400)
chr3 (47-188)||(3715904-3716046)
chr3 (47-171)||(5366226-5366351)
chr3 (85-193)||(36029131-36029240)
chr3 (86-193)||(21711261-21711368)
chr3 (47-193)||(26299026-26299171)
chr3 (47-176)||(8126685-8126814)
chr3 (47-190)||(24695068-24695210)
chr3 (50-197)||(29100193-29100342)
chr3 (47-193)||(30709691-30709839)
chr3 (47-190)||(40592684-40592828)
chr3 (47-189)||(3328259-3328401)
chr3 (145-195)||(6794714-6794764)
chr3 (143-193)||(32143359-32143409)
chr3 (143-192)||(27452997-27453046)
chr3 (145-193)||(16264388-16264436)
chr3 (145-193)||(27974953-27975001)
chr3 (47-193)||(1417393-1417539)
chr3 (47-193)||(3323593-3323739)
chr3 (143-193)||(2671595-2671645)
chr3 (143-193)||(7167282-7167332)
chr3 (143-193)||(8477400-8477450)
chr3 (143-193)||(8739072-8739122)
chr3 (143-193)||(9091310-9091360)
chr3 (143-193)||(26928600-26928650)
chr3 (147-193)||(27986449-27986495)
chr3 (147-193)||(33386669-33386715)
chr3 (143-193)||(40372804-40372854)
chr3 (47-191)||(47923806-47923953)
chr3 (54-137)||(25517076-25517159)
chr3 (162-195)||(38210564-38210597)
chr3 (143-191)||(1305988-1306036)
chr3 (157-193)||(6303420-6303456)
chr3 (157-193)||(10094110-10094146)
chr3 (157-193)||(10100127-10100163)
chr3 (157-193)||(10200990-10201026)
chr3 (85-158)||(23391989-23392063)
chr3 (158-193)||(10897117-10897152)
chr3 (158-193)||(54193338-54193373)
chr3 (84-193)||(37466329-37466438)
chr3 (157-190)||(10208039-10208072)
chr3 (158-195)||(10595067-10595104)
chr3 (47-80)||(25929299-25929332)
chr3 (146-191)||(25929445-25929490)
chr3 (157-190)||(27544383-27544416)
chr3 (47-182)||(35925529-35925663)
chr3 (158-191)||(54188621-54188654)
chr3 (85-158)||(760861-760935)
chr3 (85-158)||(22835082-22835156)
chr3 (85-158)||(23410409-23410483)
chr3 (85-158)||(29682373-29682447)
chr3 (85-158)||(32891117-32891192)
[»] chr6 (29 HSPs)
chr6 (47-191)||(5572155-5572298)
chr6 (47-191)||(31086386-31086530)
chr6 (47-193)||(31979551-31979697)
chr6 (47-189)||(1115017-1115159)
chr6 (47-193)||(10077081-10077224)
chr6 (47-193)||(21801257-21801403)
chr6 (47-189)||(31076849-31076996)
chr6 (47-193)||(18232883-18233031)
chr6 (83-191)||(22963739-22963847)
chr6 (83-191)||(23824546-23824654)
chr6 (47-187)||(4629998-4630138)
chr6 (47-189)||(14521716-14521857)
chr6 (47-191)||(24435884-24436028)
chr6 (145-193)||(5757489-5757537)
chr6 (64-171)||(30518058-30518165)
chr6 (143-193)||(5674779-5674829)
chr6 (147-193)||(22709056-22709102)
chr6 (47-139)||(99248-99339)
chr6 (47-199)||(33721471-33721624)
chr6 (157-193)||(13878837-13878873)
chr6 (157-193)||(13883585-13883621)
chr6 (157-193)||(16786029-16786065)
chr6 (153-189)||(21356078-21356114)
chr6 (68-199)||(27165715-27165847)
chr6 (147-193)||(31936625-31936671)
chr6 (47-97)||(31936711-31936761)
chr6 (157-191)||(35201364-35201398)
chr6 (146-195)||(11857010-11857058)
chr6 (161-193)||(5273250-5273282)
[»] scaffold0006 (4 HSPs)
scaffold0006 (47-193)||(5721-5869)
scaffold0006 (61-193)||(2530-2661)
scaffold0006 (145-195)||(133291-133341)
scaffold0006 (157-189)||(224929-224961)
[»] scaffold0036 (1 HSPs)
scaffold0036 (85-193)||(85721-85829)
[»] scaffold0016 (1 HSPs)
scaffold0016 (47-156)||(102407-102516)
[»] scaffold0188 (2 HSPs)
scaffold0188 (143-193)||(17961-18011)
scaffold0188 (143-193)||(24054-24104)
[»] scaffold0176 (1 HSPs)
scaffold0176 (47-187)||(17307-17446)
[»] scaffold0002 (1 HSPs)
scaffold0002 (47-198)||(14716-14868)
[»] scaffold0148 (1 HSPs)
scaffold0148 (93-193)||(10767-10868)
[»] scaffold0140 (1 HSPs)
scaffold0140 (145-193)||(8430-8478)
[»] scaffold0087 (1 HSPs)
scaffold0087 (145-193)||(43972-44020)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-191)||(23568-23715)
[»] scaffold0098 (1 HSPs)
scaffold0098 (155-193)||(45291-45329)
[»] scaffold1050 (1 HSPs)
scaffold1050 (157-193)||(3105-3141)
[»] scaffold0209 (1 HSPs)
scaffold0209 (158-193)||(17021-17056)
[»] scaffold0154 (1 HSPs)
scaffold0154 (162-193)||(11507-11538)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 27149173 - 27149359
Alignment:
Q  13 tggtgttgtgatagaaggtggcaaaattagtcttttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||    
T  27149173 tggtgttgtgatagaaggtggcaaaattagtcttttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttct 27149272  T
Q  113 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27149273 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 27149359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 2869605 - 2869750
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtctta-ttctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||| ||| || ||  ||||||||||||||||||| ||||||||||| || ||    
T  2869605 ttttctcttaggattcattgagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcc 2869704  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||||||  ||||||||||||||||| ||||||||||    
T  2869705 tttgtatcactttcatcttagtggattggagagctactctctcccc 2869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 34682246 - 34682393
Alignment:
Q  47 ttttctcttaggattca--ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    |||||||||||||||||  ||||||| |||| ||||  | ||||||||||||| ||||||||| ||||| ||| ||| | |||| ||||||||||| ||     
T  34682246 ttttctcttaggattcaccttgtgagagtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaact 34682343  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  34682344 cttttgtaacactttcattatagtggattggagagctgctctctccccca 34682393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 31056227 - 31056084
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| |||||| |||| || |     
T  31056227 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactct 31056130  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||    
T  31056129 tttgtaacactttcatcttagtggattggagagctgctctctcccc 31056084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 14698922 - 14699066
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  14698922 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 14699019  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| | ||||||| |||||||||||||| ||||||||||||||||    
T  14699020 tttgtaac-ctttcatcatagtggattggagggctgctctctccccca 14699066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 21630129 - 21629983
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||||||||| ||||| ||| ||||| |||  ||||||||||| ||    
T  21630129 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaac 21630032  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
     | |||||| ||||||||| |||||||||||||||||||||||||||||    
T  21630031 tcttttgtaacactttcatcatagtggattggagagctgctctctcccc 21629983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 15903803 - 15903932
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||| |||||||||||| |||||||| |||||| |||||||||||||| |||    || |||||||||||||| |||| | ||||||||| ||||||    
T  15903803 ttttctcataggattcattgagagtgtgggtgacttgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagct-atttcttgtaacccct 15903901  T
Q  147 ttgtatcactttcattatagtggattggaga 177  Q
    |||||||||||| ||  ||||||||||||||    
T  15903902 ttgtatcacttttatcttagtggattggaga 15903932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 28770687 - 28770839
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagtta-agtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||| |   |    
T  28770687 ttttctcttaggattcattgcgagtgtgtatgacttgaaaaatgggtagaaattagagt-ttgttctttgtgagcttttaagctaatttcttgtaatatc 28770785  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||||| | | ||  ||| |||| ||||||||||||| ||| ||| |||||    
T  28770786 tttgtatcattcttatcgtagaggatcggagagctgctctatcctccagagtag 28770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 33118319 - 33118174
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||| ||||||||| ||||| || ||||  | ||||||||||||| ||||||||| ||||| ||| ||||| |||| ||||||||||| ||       
T  33118319 ttttctcttaagattcattgagagtgagggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactat 33118222  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| | ||||||| |||||||||||||| ||||||||||||||||    
T  33118221 tttgtaactctttcatcatagtggattggagggctgctctctccccca 33118174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 193
Target Start/End: Complemental strand, 8040248 - 8040098
Alignment:
Q  46 tttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    |||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  8040248 tttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaac 8040151  T
Q  143 ccc--tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     |   |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8040150 tctcttttgtaacactttcatcatagtggattggagagctgctctctccccca 8040098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 8390062 - 8390209
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||||||| ||     
T  8390062 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaact 8390159  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | ||| || ||||||||| |||||||||||||||||||||||||||||||    
T  8390160 cttttttaacactttcatcatagtggattggagagctgctctctccccca 8390209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 13569513 - 13569366
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||  ||| || |||||||| ||| ||||| ||||| ||| | ||| |||| ||||||||||| ||     
T  13569513 ttttctcttaggattcatattgtgagagtgggtgac--aaacaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaact 13569416  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13569415 cttttgtaacactttcatcatagtggattggagagctgctctctccccca 13569366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 10445394 - 10445503
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  10445494 ctctccccca 10445503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 17865389 - 17865241
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   ||||||||||||| ||||| |  ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  17865389 ttttctcttaggattcattattgagagtgtggatgacataaaata--ggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaac 17865292  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| |||||||||||||| | ||||||||||||||    
T  17865291 tcttttgtaacactttcatcatagtggattggagggttgctctctccccca 17865241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 18674313 - 18674454
Alignment:
Q  47 ttttctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||| ||||||||  ||||||||| |||||| |||||||| ||||| ||| |  || ||||||||||||||||||  ||||||||||| |||||    
T  18674313 ttttctcttatgattcatttatgagtgtgggtgacttgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaacccc 18674412  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctct 187  Q
    || |||||||| |  | ||||| ||| |||||||||||||||    
T  18674413 ttggtatcactcttgtcatagtagatcggagagctgctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 20522367 - 20522258
Alignment:
Q  85 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||||||||| |||||| || ||||| |||  ||||||||||| |||| |||||| ||||||||| |||||||||||||| | ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  20522267 ctctccccca 20522258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 2837943 - 2838095
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| ||  |||| |||| | ||||||||| | || ||| ||  | ||||||||||||| ||    ||||||||||| || | |    
T  2837943 ttttctcttaggattcattgagaaggtgggtgacatgaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcat 2838042  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||| |||||    
T  2838043 ttgtatcactttcattttagtggattggagatgtgctctctcccccagagtag 2838095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 195
Target Start/End: Complemental strand, 39483117 - 39482967
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| |||| |||||  ||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  39483117 ttttctcttaggattcattattgagagtgtgggtgacataaaa--tgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 39483020  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
     | |||||| || |||||| ||||||||||||||  |||||||||||||||||    
T  39483019 tcttttgtaacattttcatcatagtggattggaggcctgctctctcccccata 39482967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 195
Target Start/End: Original strand, 10707165 - 10707313
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||   | | |||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  10707165 ttttctcttaggattcatattgtgagagtgggtgac---acagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 10707261  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    | |||||| ||||||||| |||||||||||||||| || |||||||||||||    
T  10707262 cttttgtaacactttcatcatagtggattggagagttgttctctcccccata 10707313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 35397694 - 35397554
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| || ||||| |||||| |||||||| ||||| ||| || || |||||| ||| |||||||| |||||| | || ||| ||    
T  35397694 ttttctcttaggattcattgagattgtgggtgacttgaaaaatggatagaaattaggt-ttgttctttatgaccttttaagctaattt-tcgtaacctct 35397597  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    || ||||||||||||  |||||||||| ||||||||| |||||    
T  35397596 ttatatcactttcatcttagtggattgaagagctgctatctcc 35397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 34389035 - 34388896
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 144  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| |||      |||| ||||||||||| || |    
T  34389035 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttctt-gtg------taagctaatttcttgtaactc 34388945  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     |||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  34388944 ttttgtaacactttcatcatagtggattggagagctactctctccccca 34388896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 3491838 - 3491788
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3491838 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 3491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 25398583 - 25398533
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25398583 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 25398533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 25403721 - 25403671
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25403721 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 25403671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 25407710 - 25407660
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  25407710 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 25407660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 28259188 - 28259236
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28259188 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 28259236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 40015104 - 40014966
Alignment:
Q  52 tcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgt 150  Q
    |||||||||| |||| |||||||| |||| | |||| || |||||| ||| ||||| |||||| ||||| ||||||| |||||||| |  || | |||||    
T  40015104 tcttaggatttattgagagtgtgggtgacatgaaaa-tgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgt 40015006  T
Q  151 atcactttcattatagtggattggagagctgctctctccc 190  Q
    |||||||||||  ||||||||||||| | || ||||||||    
T  40015005 atcactttcatcttagtggattggagggatgttctctccc 40014966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 9296410 - 9296460
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  9296410 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 9296460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 11098936 - 11098986
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  11098936 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 11098986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 14291576 - 14291526
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  14291576 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 14291526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 23078422 - 23078531
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||||||||| ||||| ||| |||||  ||| || |||||||| || | ||| || ||||||||| |||||||||||||||| || ||    
T  23078422 aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagttgttc 23078520  T
Q  185 tctcccccata 195  Q
    |||||||||||    
T  23078521 tctcccccata 23078531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 33528576 - 33528674
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    ||||||||||||| ||| ||||| |||||    ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| | |||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctc 33528671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 42039581 - 42039725
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttac 142  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| || || ||| |||||  ||| |||||| ||||| ||    
T  42039581 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaac 42039678  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
     | || ||| ||||||||| |||||||||| |||||||||||||||||    
T  42039679 tc-ttcgtaacactttcatcatagtggattagagagctgctctctccc 42039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 2736315 - 2736351
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2736315 ttcattatagtggatcggagagctgctctctccccca 2736351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 2741051 - 2741087
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2741051 ttcattatagtggatcggagagctgctctctccccca 2741087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 16388449 - 16388525
Alignment:
Q  113 ttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||||||||||||||| ||||||||||| ||| |||| |||| || | || | ||||||  |||||||||||||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcc 16388525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 17462546 - 17462582
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  17462546 ttcattatagtggatcggagagctgctctctccccca 17462582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 40738926 - 40738882
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctcccccc 40738882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 45679833 - 45679869
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45679833 ttcattatagtggatcggagagctgctctctccccca 45679869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 16940193 - 16940268
Alignment:
Q  118 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| |||| ||||||||||| |  | |||||| ||||||||| |||||||||||||| |||| ||| |||||||    
T  16940193 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttccccca 16940268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 17010858 - 17010933
Alignment:
Q  118 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| |||| ||||||||||| |  | |||||| ||||||||| |||||||||||||| |||| ||| |||||||    
T  17010858 agcttataagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttccccca 17010933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 33671037 - 33671002
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  33671037 tcattatagtggatcggagagctgctctctccccca 33671002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 20050092 - 20050058
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccc 192  Q
    |||||||||||||| ||||||||||||||||||||    
T  20050092 tcattatagtggatcggagagctgctctctccccc 20050058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 11151722 - 11151671
Alignment:
Q  109 ttctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||||  ||||| ||||||||||| |||| |||||||||||||    
T  11151722 ttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  11690515 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 39680155 - 39680191
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||  |||||||||||||||||||||    
T  39680155 ttcattatagtggaacggagagctgctctctccccca 39680191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 39687093 - 39687129
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||  |||||||||||||||||||||    
T  39687093 ttcattatagtggaacggagagctgctctctccccca 39687129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  42362366 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 48 - 198
Target Start/End: Original strand, 33030854 - 33031004
Alignment:
Q  48 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 147  Q
    ||||||||||||||||||| |||||||  |||||| |||||||||||||| ||| || || ||||||||||||||||||| ||||||||||| ||||| |    
T  33030854 tttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccat 33030953  T
Q  148 tgtatcactttcattatagtggattggagagctgctctctcccccatagta 198  Q
    || |||||||||||  ||||| |||||||||||||||||||||||| ||||    
T  33030954 tgcatcactttcatcttagtgaattggagagctgctctctcccccagagta 33031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 7160817 - 7160968
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| |||||| | |||||||||||||  |||||| ||||||||| ||||||||||||||| ||  |||||| |||| ||||||    
T  7160817 ttttctcttaggattcattgagagtgtag-tgacttaaaaaatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccct 7160915  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||||   ||||||||||||||||| ||||||||| |||||||    
T  7160916 ttgtatcactttcatctgagtggattggagagctgatctctcccctatagtag 7160968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 2630415 - 2630272
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||||||||| || |||||| |||||||  || || ||| || || ||||||||| | ||||||| |||||| |||| |||| |    
T  2630415 ttttctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaattaggttttgttctttgtgtgtttttaagctaatttattgtaaccctt 2630316  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||    
T  2630315 ttgtatcactttcatcatagtggattgaagagctgctatctccc 2630272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 10281936 - 10281789
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  ||||||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  10281936 ttttctcttaggattcatattgtgagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 10281839  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10281838 cttttgtaacactttcatcatagtggattggagagctgctctctccccca 10281789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 192
Target Start/End: Original strand, 11181745 - 11181890
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||||||||||||||||||||| |||| | |||| ||||||||| ||| ||||| ||| |||| ||||||||| | ||||||||||| || |     
T  11181745 ttttctcttaggattcattgtgagtgtgggtgacatgaaaa-tgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactca 11181843  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccc 192  Q
    ||||||||||||||||  ||||||||||||| | |||||||||||||    
T  11181844 tttgtatcactttcatcttagtggattggagggttgctctctccccc 11181890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 6742036 - 6741885
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||| ||||||||||||||| |||||||| |||||| ||||||| |||||| ||| || || ||||||||||| ||  ||| ||||||||||| ||  ||    
T  6742036 ttttttcttaggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaacttct 6741937  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagta 198  Q
    ||||||||||| |||  || ||||||||||||||||||| ||||||| ||||    
T  6741936 ttgtatcacttccatcttaatggattggagagctgctctatcccccagagta 6741885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 19588929 - 19588787
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| || ||||| ||||  |||||  |||||||| ||| ||||| ||||| ||| ||||| |||||||||||||||| || |     
T  19588929 ttttctcttaggattcattgagattgtgggtgacacaaaaa--gggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactct 19588832  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||    
T  19588831 tttgtaacactttcatcatagtggattggagggctgctctctccc 19588787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 195
Target Start/End: Original strand, 12084127 - 12084236
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  185 tctcccccata 195  Q
    ||| |||||||    
T  12084226 tctgccccata 12084236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 45 - 187
Target Start/End: Complemental strand, 3880486 - 3880343
Alignment:
Q  45 ttttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgtta 141  Q
    ||||||||| ||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||  ||||||||||| |    
T  3880486 ttttttctcctaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaa 3880389  T
Q  142 cccctttgtatcactttcattatagtggattggagagctgctctct 187  Q
    | | |||||| ||||||||| |||||||||||||||||||||||||    
T  3880388 ctcttttgtaacactttcatcatagtggattggagagctgctctct 3880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 11916922 - 11917033
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| |||||  ||  || |||||||| || | |||||| |||||||||||||||||||||||||||||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  184 ctctcccccata 195  Q
    ||||||||||||    
T  11917022 ctctcccccata 11917033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 42127323 - 42127469
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| |||  | ||||||||||||||  || | ||| ||| ||||| ||||| |||| |||||||||| || | |    
T  42127323 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttg-taactc 42127421  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     ||||| |||||||||  ||||||||||| | ||||||||||||||||    
T  42127422 attgtaacactttcatcttagtggattggggggctgctctctccccca 42127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 28832441 - 28832297
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| |||   ||| |||||| ||  ||| |||| ||||||||||| || | |    
T  28832441 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagaacttgttcttt-tgtacttataagctaatttcttgtaactcat 28832343  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | ||| |||||||||  ||||||||||||| ||||||||||||||||    
T  28832342 t-gtaacactttcatcttagtggattggagggctgctctctccccca 28832297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 38192261 - 38192211
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  38192261 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 38192211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 38219486 - 38219436
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  38219486 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 38219436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 9353343 - 9353391
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  9353343 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 9353391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 15464618 - 15464570
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  15464618 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 15464570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 17003911 - 17004019
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| ||||| |||| |||||| |||| || | |||| |  |||||||| ||||||||||| ||||||||||    
T  17003911 aaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctgctc 17004010  T
Q  185 tctccccca 193  Q
    |||||||||    
T  17004011 tctccccca 17004019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 36932361 - 36932409
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  36932361 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 36932409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 35387750 - 35387700
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  35387750 ccctttgtaacactttcatcatagtagattggagagctgctctctccccca 35387700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 14520375 - 14520270
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||||||||||| ||||||||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  185 tctcccc 191  Q
    || ||||    
T  14520276 tcccccc 14520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 34842785 - 34842644
Alignment:
Q  49 ttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccccttt 148  Q
    ||||||||| |||||||||| || |   |||||| ||||||| |||||| ||| |   | ||||| |||||||| |||| |||  |||||| ||| ||||    
T  34842785 ttctcttagaattcattgtgggttttagtgacttgaaaaatgagtagaaattaggatatgttcttggtgagcttgtaagataacatcttgtaacctcttt 34842686  T
Q  149 gtatcactttcatta--tagtggattggagagctgctctctccc 190  Q
    ||||||||  |||||  ||||||||| |||||||||||||||||    
T  34842685 gtatcact--cattacatagtggattagagagctgctctctccc 34842644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 1170921 - 1170957
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1170921 ttcattatagtggatcggagagctgctctctccccca 1170957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 193
Target Start/End: Original strand, 4410236 - 4410267
Alignment:
Q  162 tatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||||||||||||||||||||    
T  4410236 tatagtggattggagagctgctctctccccca 4410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 22672946 - 22672981
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  22672946 tcattatagtggatcggagagctgctctctccccca 22672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 25445608 - 25445643
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  25445608 tcattatagtggatcggagagctgctctctccccca 25445643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 35385522 - 35385487
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  35385522 tcattatagtggatcggagagctgctctctccccca 35385487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 24135936 - 24135886
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| |||||||||  ||||| |||||| |||||||||||||||||    
T  24135936 ccctttgtaacactttcatcttagtgcattggatagctgctctctccccca 24135886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 30631493 - 30631444
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  30631493 ccctttgtaacactttc-tcatattggattggagagctgctctctccccca 30631444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 31180301 - 31180252
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  31180301 ccctttgtaacactttc-tcatattggattggagagctgctctctccccca 31180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 15044770 - 15044722
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    |||||| ||||||| | ||| |||||||||||||||||||||||||||||    
T  15044770 tttgtaacactttc-tcatattggattggagagctgctctctcccccata 15044722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 158
Target Start/End: Original strand, 33831693 - 33831768
Alignment:
Q  84 aaaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    |||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  33831693 aaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 31401871 - 31401899
Alignment:
Q  167 tggattggagagctgctctctcccccata 195  Q
    |||||||||||||||||||||||||||||    
T  31401871 tggattggagagctgctctctcccccata 31401899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 36263877 - 36263849
Alignment:
Q  163 atagtggattggagagctgctctctcccc 191  Q
    |||||||||||||||||||||||||||||    
T  36263877 atagtggattggagagctgctctctcccc 36263849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 9054750 - 9054902
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||| |||  | || ||||||||| ||||||||| ||||||||||| ||| ||    
T  9054750 ttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccact 9054849  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||||  ||||||||| |||||||||||||||| ||| |||||    
T  9054850 ttgtatcactttcatcttagtggattagagagctgctctctcctccagagtag 9054902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 189
Target Start/End: Complemental strand, 3051303 - 3051162
Alignment:
Q  48 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 147  Q
    ||||||||||||||||||| ||||||   |||| | |||||||||||||| |||||| || ||||||||||||| ||| | ||||||||||| || | ||    
T  3051303 tttctcttaggattcattgagagtgtaagtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatt 3051204  T
Q  148 tgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||||||||||||||  ||||||||||||||| ||||||||||    
T  3051203 tgtatcactttcatcttagtggattggagaggtgctctctcc 3051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 5990474 - 5990619
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||||||||||||  ||||||| |||||| ||||||||||  || | | ||| | ||||||||||||||||||| ||||||||||| ||  ||    
T  5990474 ttttctcttaggattcattgaaagtgtgggtgacttgaaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatct 5990573  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||||  ||||  |||||||||| |||||||||||||    
T  5990574 ttgtatcactttcatcttagt-aattggagagccgctctctccccca 5990619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 6127407 - 6127259
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||    
T  6127407 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaac 6127310  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  6127309 tcttttgtaacactttcatcatagtggattggagagctgctctcttcccca 6127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 6813838 - 6813723
Alignment:
Q  77 tgacttaaaaaatgggtagaag-ttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattgga 175  Q
    |||||| ||||||||||||||  ||| || || ||||||||||||||  ||| ||||||||||| |||||||||| ||||||||||  || |||||||||    
T  6813838 tgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattggattgga 6813739  T
Q  176 gagctgctctctcccc 191  Q
    ||||||||||||||||    
T  6813738 gagctgctctctcccc 6813723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 23799527 - 23799632
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  184 ctctcc 189  Q
    ||||||    
T  23799627 ctctcc 23799632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 28307746 - 28307593
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagctttt-aaggtaatttcttgttacccc 145  Q
    |||||| |||||||||| || |||||||| |||||| | ||||| ||||||  || ||||| |||||| ||||||||| ||  ||||||||||| ||||     
T  28307746 ttttcttttaggattcagtgagagtgtgggtgacttgagaaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaaccca 28307647  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    | ||||| |||| |||  |||||||||||||||||||||||  ||||| |||||    
T  28307646 tgtgtattacttccatcttagtggattggagagctgctctcatccccagagtag 28307593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 195
Target Start/End: Complemental strand, 7412486 - 7412377
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  185 tctcccccata 195  Q
    |||||||||||    
T  7412387 tctcccccata 7412377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 7493086 - 7493212
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||| |||||||||| |||| |||||||| |||||| |||||  ||||||| ||| || || |||| |||||||||||| | ||||||||| | ||  ||    
T  7493086 ttttttcttaggatttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttct 7493185  T
Q  147 ttgtatcactttcattatagtggattg 173  Q
    |||||||||||||||  ||||||||||    
T  7493186 ttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 18853166 - 18853227
Alignment:
Q  132 tttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctccccca 18853227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 18870560 - 18870621
Alignment:
Q  132 tttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||||| |||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctccccca 18870621  T

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Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 26403180 - 26403289
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||| | | || | |||||| ||||||||| |||||||||||||||||||||    
T  26403180 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctgct 26403279  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  26403280 ctctccccca 26403289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 46 - 195
Target Start/End: Original strand, 5702393 - 5702544
Alignment:
Q  46 tttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgtta 141  Q
    |||||||||||||||||||| |   |||||||| ||||| ||||  ||||||||| ||| || ||  |||| ||| ||||| |||| ||||||||||| |    
T  5702393 tttttctcttaggattcattattgagagtgtgggtgactcaaaa--tgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaa 5702490  T
Q  142 cccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    | | |||||| ||||||||| |||| ||||||||| | ||||||||||||||||    
T  5702491 ctcttttgtaacactttcatcataggggattggagggatgctctctcccccata 5702544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 1261963 - 1262013
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  1261963 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 1262013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 19752306 - 19752451
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 144  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  19752306 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 19752405  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
     || ||| |||||||||  ||||||||||||||||||||||||||||    
T  19752406 att-gtaacactttcatcttagtggattggagagctgctctctcccc 19752451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 31071238 - 31071288
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31071238 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 31071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 4456173 - 4456066
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||   || || ||||||| || | ||||||| ||||||||| ||||||||||||||||||||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttg-taactctttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  185 tctccccca 193  Q
    |||||||||    
T  4456074 tctccccca 4456066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 4760084 - 4760136
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  4760084 ccctttgtaacactttcatcatattggattggagagctgctctctcccccata 4760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 26287985 - 26287939
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctccccca 26287939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 26301242 - 26301196
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctccccca 26301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 26313236 - 26313190
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctccccca 26313190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 36979465 - 36979415
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  36979465 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 36979415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 8863569 - 8863646
Alignment:
Q  77 tgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcact 156  Q
    |||||| |||||||||||||| |||||  || ||||  ||||||||||||| ||||||||||| ||| ||||||||||||    
T  8863569 tgacttgaaaaatgggtagaaattaaggtttgttct--gtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 19175765 - 19175813
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  19175765 ctttgtaacactttcatcatagtggattggagagttgctctctccccca 19175813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 10689152 - 10689202
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||| |||| ||||||||| ||| |||||||||||||||||||||||||||    
T  10689152 ccctctgtaacactttcatcatattggattggagagctgctctctccccca 10689202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 30655734 - 30655684
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| | |||||||||||||||||||||||||    
T  30655734 ccctttgtaacactttcatcatattagattggagagctgctctctccccca 30655684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 31513245 - 31513279
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgact 81  Q
    |||||||||||||||||||||||||||||||||||    
T  31513245 ttttctcttaggattcattgtgagtgtggatgact 31513279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 16757339 - 16757303
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16757339 ttcattatagtggatcggagagctgctctctccccca 16757303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 25684753 - 25684789
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25684753 ttcattatagtggatcggagagctgctctctccccca 25684789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 28890877 - 28890912
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  28890877 tcattatagtggatcggagagctgctctctccccca 28890912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 29554855 - 29554820
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  29554855 tcattatagtggatcggagagctgctctctccccca 29554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 4696521 - 4696612
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgt 139  Q
    ||||||||||||||||| || |||||||| ||||  | ||||||||||||| ||| ||||| |||||  || ||||| |||| |||||||||||    
T  4696521 ttttctcttaggattcaatgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgt 4696612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 4696617 - 4696655
Alignment:
Q  155 ctttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  4696617 ctttcatcatagtggattggagggctgctctctccccca 4696655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 4812559 - 4812525
Alignment:
Q  157 ttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||||| |||||||||||||||||||    
T  4812559 ttcattatagtggatcggagagctgctctctcccc 4812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 9765848 - 9765878
Alignment:
Q  163 atagtggattggagagctgctctctccccca 193  Q
    |||||||||||||||||||||||||||||||    
T  9765848 atagtggattggagagctgctctctccccca 9765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 11772063 - 11771981
Alignment:
Q  109 ttctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||||||| ||| |||  ||||||||| | ||| |||||||||||| | || ||||||||||||| || || |||||||||    
T  11772063 ttctttgtgaacttgtaaactaatttcttttaacctctttgtatcactcttatcatagtggattggaaagttgatctctcccc 11771981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 33037816 - 33037865
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  33037816 ccctttgtaacactttc-tcatattggattggagagctgctctctccccca 33037865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 18813151 - 18813184
Alignment:
Q  162 tatagtggattggagagctgctctctcccccata 195  Q
    ||||||||||||||| ||||||||||||||||||    
T  18813151 tatagtggattggagggctgctctctcccccata 18813184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 24873246 - 24873213
Alignment:
Q  162 tatagtggattggagagctgctctctcccccata 195  Q
    ||||||||||||||| ||||||||||||||||||    
T  24873246 tatagtggattggagggctgctctctcccccata 24873213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 28328018 - 28328054
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||  |||||||||||||||||||||    
T  28328018 ttcattatagtggaacggagagctgctctctccccca 28328054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagct--tttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || || |||||||||||||  || ||| ||||||||||| || | |||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 44721113 - 44721141
Alignment:
Q  162 tatagtggattggagagctgctctctccc 190  Q
    |||||||||||||||||||||||||||||    
T  44721113 tatagtggattggagagctgctctctccc 44721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 5817183 - 5817327
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||| ||||||||||||||| |||||||  |||||| |||||||| ||||| ||| || || ||||||||||||| ||| |  |||||||||| ||||||    
T  5817183 ttttttcttaggattcattgagagtgtgagtgacttgaaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccct 5817282  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  5817283 ttgtatcactttcatattagtggattggagagctgctctctcccc 5817327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 28617175 - 28617290
Alignment:
Q  84 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    |||||| ||||||| ||| || || ||||||||||||||||||| ||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||    
T  28617175 aaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgct 28617274  T
Q  184 ctctcccccatagtag 199  Q
    |||||||||| |||||    
T  28617275 ctctcccccagagtag 28617290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 2647610 - 2647755
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  2647610 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 2647707  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  2647708 tttgtaacactttcatcatagtggattggagggctgctctctccccca 2647755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 47 - 192
Target Start/End: Complemental strand, 3047438 - 3047294
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||| ||||| ||||||||| |||||||| ||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| | ||||||||| || | |    
T  3047438 ttttatcttaagattcattgagagtgtgggtgacttaaaaa-tgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttgtaactcat 3047340  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccc 192  Q
    ||||| |||||||||  |||||||||||| | | ||||||||||||    
T  3047339 ttgtaccactttcatattagtggattggataacggctctctccccc 3047294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 29159989 - 29159843
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||  ||||| ||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||     
T  29159989 ttttctcttaggattcatattgtgagagtgggtgacacaaaaa-tgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaact 29159891  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||||    
T  29159890 cttttgtaacactttcatcatagtggattggagagctgctctctcccc 29159843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 56133 - 55987
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| ||    
T  56133 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 56036  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
     | |||||| ||||||||| |||||||||||||| ||||||||||||||    
T  56035 tcttttgtaacactttcatcatagtggattggagggctgctctctcccc 55987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 46516260 - 46516367
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  184 ctctcccc 191  Q
    ||||||||    
T  46516360 ctctcccc 46516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 49091847 - 49091699
Alignment:
Q  47 ttttctcttaggattcattgtg---agtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| ||   ||||||| ||||  | | ||||||||||| ||| ||||| ||||| ||| ||||| |||||||||||||||| ||    
T  49091847 ttttctcttaggattcattatggagagtgtgggtgac--acagaatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaac 49091750  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| |||||||||||||||| |||||||| |||||    
T  49091749 tcttttgtaacactttcatcatagtggattggagagttgctctcttcccca 49091699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 20284273 - 20284127
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| |||  | ||||| |||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  20284273 ttttctcttaggattcattgagagtgtgggtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgca 20284174  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    || ||| |||||||||  ||||||||||||| ||||||||||||||||    
T  20284173 tt-gtaacactttcatcttagtggattggagggctgctctctccccca 20284127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 33332363 - 33332509
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||||| |||||| |||||||  ||| |  ||||||| |||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  33332363 ttttctcttaggaatcattgagagtgtgcgtga-tacaaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 33332461  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  33332462 tttgtaacactttcatcttagtggattggagggctgctctctccccca 33332509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 2580574 - 2580428
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| |||  | ||||||||||||||  || | ||| ||||| ||| |||||  ||| || |||||||| || |     
T  2580574 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaactca 2580475  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    || ||| |||||||||  ||||||||||||||||||||||||||||||    
T  2580474 tt-gtaacactttcatcttagtggattggagagctgctctctccccca 2580428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 21639896 - 21639846
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21639896 ccctttgtaacactttcattatagtggattggagagctgctctctccccca 21639846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 44848636 - 44848743
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||||||||| ||| |||||  ||| |  ||||||| || | ||||||| ||||||||| ||||||||||||||||||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttg-taactctttgtaacactttcatcatagtggattggagagctgctc 44848734  T
Q  185 tctccccca 193  Q
    |||||||||    
T  44848735 tctccccca 44848743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 35960963 - 35960854
Alignment:
Q  85 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||| | || | |||||| ||||||||| ||||||| |||||| ||||||    
T  35960963 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgct 35960864  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  35960863 ctctccccca 35960854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 4796581 - 4796726
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| || ||| | ||||  | |||||||||| || | | ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  4796581 ttttctcttaggattcattgagaatgtaggtgac--acaaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 4796678  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| || |||||| |||||||||| ||| |||||| |||||||||    
T  4796679 tttgtaacaatttcatcatagtggatttgagggctgctttctccccca 4796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 9189920 - 9190067
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 144  Q
    |||||||||||||||||||  |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  9189920 ttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 9190019  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     || ||| |||||||||  ||||||||||||||||||||||||||||||    
T  9190020 att-gtaacactttcatcttagtggattggagagctgctctctccccca 9190067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 18413727 - 18413679
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  18413727 ccctttgtaacactttcatcatagtggattggagagctgctctctcccc 18413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 23402926 - 23403069
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||  |||  | |||||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||| || | |    
T  23402926 ttttctcttaggattcattgagagtgtgagtgatgtgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttg-taactc 23403024  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
     ||||| |||||||||  |||| |||||||| ||||||| |||||    
T  23403025 attgtaacactttcatcttagtagattggagggctgctcactccc 23403069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 21983369 - 21983322
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  21983369 tttgtaacactttcatcatagtggattggagagctgctctctccccca 21983322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 2058053 - 2058003
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  2058053 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 2058003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 18408851 - 18408801
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  18408851 ccctttgtaacactttcatcatactggattggagagctgctctctccccca 18408801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 1533453 - 1533503
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||||||||||||    
T  1533453 ccctttgtaacactttcatcatattggattggagagatgctctctccccca 1533503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 3320122 - 3320086
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3320122 ttcattatagtggatcggagagctgctctctccccca 3320086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 3324870 - 3324834
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3324870 ttcattatagtggatcggagagctgctctctccccca 3324834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 21646094 - 21646050
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctct 187  Q
    |||||| || ||||||||| |||||||||||||||||||||||||    
T  21646094 ccctttttaacactttcatcatagtggattggagagctgctctct 21646050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 25405503 - 25405539
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25405503 ttcattatagtggatcggagagctgctctctccccca 25405539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 2121011 - 2121046
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  2121011 tcattatagtggatcggagagctgctctctccccca 2121046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 45685658 - 45685733
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagctt 122  Q
    |||||||||||||||||||| || | ||  ||||||||||||||| ||||| |||||  || |||||||| |||||    
T  45685658 ttttctcttaggattcattgcgactttgagtgacttaaaaaatggatagaaattaaggtttgttctttgtcagctt 45685733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 9185178 - 9185224
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctccccca 9185224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 20357557 - 20357606
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||| | ||| |||||||||||||||||||||||||||    
T  20357557 ccctttgtaacactttc-tcatattggattggagagctgctctctccccca 20357606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 2479422 - 2479381
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctc 186  Q
    ||||||| ||||||||| |||||||||| |||||||||||||    
T  2479422 ctttgtaacactttcatcatagtggatttgagagctgctctc 2479381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 7351717 - 7351684
Alignment:
Q  162 tatagtggattggagagctgctctctcccccata 195  Q
    ||||||||||||||| ||||||||||||||||||    
T  7351717 tatagtggattggagggctgctctctcccccata 7351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 9235495 - 9235588
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgt 139  Q
    |||||||||||||||| ||| ||||| || |||  | |||||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||||    
T  9235495 ttttctcttaggattcgttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgt 9235588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 21369754 - 21369795
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  21369754 tcattatagtggaacggagagctgctctctccgccatagtag 21369795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 47263754 - 47263721
Alignment:
Q  153 cactttcattatagtggattggagagctgctctc 186  Q
    ||||||||| ||||||||||||||||||||||||    
T  47263754 cactttcatcatagtggattggagagctgctctc 47263721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 7069890 - 7069926
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| | |||||||||||||||||||    
T  7069890 ttcattatagtggatcgaagagctgctctctccccca 7069926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 7074897 - 7074933
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  7074897 ttcattatagtggatcggagagctgcactctccccca 7074933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 1983214 - 1983365
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||| |||||| | |||||| ||||| || ||||| ||| || || ||||||||||||||  ||| ||||||||||| ||||||    
T  1983214 ttttctcttaggattcattgagagtgtaggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccct 1983312  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||||||||    
T  1983313 ttgtatcactttgatcctagtggattggagagctgctatctcccccatagtag 1983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 5112421 - 5112269
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||| || ||| ||||  || ||| |||| ||||||| ||||||||||| |||| |    
T  5112421 ttttctcttaggattcattgtgagtgtgagtgacttaaaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccat 5112322  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||| |||||||||  ||||||||||||||||||||||| |||||| |||||    
T  5112321 ttgtaacactttcatattagtggattggagagctgctctcacccccaaagtag 5112269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 39774218 - 39774370
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttatt-ctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||| |||||||||| |||||||  |||| | |||| ||| ||||| ||| ||||| || ||||||||||||||||| ||||||||||| |||      
T  39774218 ttttctcttgggattcattgagagtgtgagtgacatgaaaattgg-tagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaaccta 39774316  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  39774317 tttgtatcactttcattttagtggattggagagctgctctatcccccagagtag 39774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 37782047 - 37781905
Alignment:
Q  47 ttttctcttaggattcattgt-gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||| ||||||||   |||||| | |||||| |||||||||||||| |||||  || ||||||||||| ||||||| ||||||||||| ||| |    
T  37782047 ttttctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctc 37781948  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctc 188  Q
    ||||||||||||| ||||||||||||||||||| | |||||||    
T  37781947 tttgtatcacttttattatagtggattggagagttactctctc 37781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 18377543 - 18377391
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttatt-ctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||| |||||||||||||||| ||||||| |||| | |||| ||||||||| ||| | ||| || ||||||||||||||||| | ||||||| | ||||     
T  18377543 ttttttcttaggattcattgtaagtgtgggtgacatgaaaa-tgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataaccca 18377445  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||||||||||||  ||||||| ||||| |||||||||||| ||| |||||    
T  18377444 tttgtatcactttcatcttagtggaatggagggctgctctctcctccagagtag 18377391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 10047526 - 10047417
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  10047426 ctctccccca 10047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 34670578 - 34670727
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||||||||||||||||||||  |||||| |||||||| ||||| ||| |  || ||||||||||||| ||||| ||||||||||| ||| ||    
T  34670578 ttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttcttgtaacctct 34670677  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||| | |||  || |||||||||  |||||||||| |||||  ||||||||    
T  34670678 ttgta-ccctt--atcatagtggatcagagagctgctatctccttcatagtag 34670727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 16623205 - 16623348
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    |||||| |||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| | || ||||||||||| ||     
T  16623205 ttttcttttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaact 16623302  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||    
T  16623303 cttttgtaacactttcatcatagtggattggagagctgctctctcc 16623348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 38152350 - 38152498
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||| ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||| | ||    
T  38152350 ttttctcttaggattcattattgagagtgtgggtgac--acaaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataac 38152447  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||  |||||||||||||||||||||||||||||||    
T  38152448 tcttttgtaacactttcaccatagtggattggagagctgctctctccccca 38152498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 36315181 - 36315288
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  185 tctccccca 193  Q
    |||||||||    
T  36315280 tctccccca 36315288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 36329390 - 36329497
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  185 tctccccca 193  Q
    |||||||||    
T  36329489 tctccccca 36329497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 3796469 - 3796580
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||  ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||| ||||| ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  184 ctctcccccata 195  Q
    ||||||||||||    
T  3796569 ctctcccccata 3796580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 18912276 - 18912409
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||||||||||||||| || ||  |||||| |||||||| || || ||| |  || ||||||||||| || |||  |||||||||||  ||  |    
T  18912276 ttttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttcttgtatccttt 18912375  T
Q  147 ttgtatcactttcattatagtggattggagagct 180  Q
    |||||||||| | || ||||||||||||||||||    
T  18912376 ttgtatcactcttatcatagtggattggagagct 18912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 24333995 - 24333847
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtg--agcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| || || ||  |||||  ||||| |||| |||||| || | ||    
T  24333995 ttttctcttaggattcatattgtgagagtggctgac--acaaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataac 24333898  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  24333897 tcttttgtaacacgttcatcatagtggattggagagctgctctctccccca 24333847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 34495822 - 34495887
Alignment:
Q  133 ttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccccatagta 198  Q
    ||||||| |||| ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagta 34495887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 31985643 - 31985691
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  31985643 ccctttgtaacactttcatcatagtggattggagagctgctctctcccc 31985691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 16630664 - 16630735
Alignment:
Q  118 agcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||||| |||| ||||||||||| || | |||||| ||||||||| ||||||||||||||||||| |||||||    
T  16630664 agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcc 16630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 42599487 - 42599626
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| ||||| || ||||  | ||||||||||||| ||| ||||| ||| ||||| ||||| |||| |||||||||| || | |    
T  42599487 ttttctcttaggattcattgagagtgcgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttg-taactc 42599583  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctc 188  Q
     ||||| || ||||||  ||||||||||||| | |||||||||    
T  42599584 attgtaacattttcatcttagtggattggagggttgctctctc 42599626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 54867364 - 54867223
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||||||||||||  ||||||||||||  | ||||||||||||| ||| || || ||||| ||| ||||| |||| ||||||||| | ||       
T  54867364 ttttctcttaggattcattg--agtgtggatgac--acaaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactat 54867269  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||| || |||||| ||||| ||||| || ||||||||||||||    
T  54867268 tttgtaacattttcatcatagttgattgaagggctgctctctcccc 54867223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 6743327 - 6743471
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || |||| | ||| |||||| ||||  |    
T  6743327 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagctat-aagctaattttttgtagc 6743423  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
     | |||||| ||||||||| |||||||||||||| |||||||||||||    
T  6743424 tcttttgtaacactttcatcatagtggattggagggctgctctctccc 6743471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 24742028 - 24741978
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  24742028 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 24741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 29760729 - 29760679
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  29760729 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 29760679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 39246094 - 39246032
Alignment:
Q  131 atttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| || | |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccccca 39246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 189
Target Start/End: Original strand, 5396623 - 5396726
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||| | ||||||||| ||||||||||||||||||||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  185 tctcc 189  Q
    |||||    
T  5396722 tctcc 5396726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 3777733 - 3777591
Alignment:
Q  47 ttttctcttaggattc--attgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||  |||||||| |||| ||||  | ||||||||||||| |||  |||| ||||| ||| || ||  ||| || ||||||| || |    
T  3777733 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttg-taac 3777637  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
     ||||||| ||||||||| |||||||||||||||||| ||||||||    
T  3777636 tctttgtaacactttcatcatagtggattggagagctactctctcc 3777591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 5143344 - 5143297
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  5143344 tttgtaacactttcatcatagtgggttggagagctgctctctccccca 5143297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 25861946 - 25862038
Alignment:
Q  46 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgt 139  Q
    ||||||||||||||||||||| |||||||| ||||  | ||||||||||| | ||| ||||| ||||| ||| ||||| |||| |||||||||||    
T  25861946 tttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgt 25862038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 39593910 - 39593761
Alignment:
Q  48 tttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctt 147  Q
    ||||||||||||||||||||| || ||  |||||| | ||| |||||||| ||| || | |||||||||||| || |||  ||||||||||| ||   ||    
T  39593910 tttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggt-tgattctttgtgagtttgtaaactaatttcttgtaacttatt 39593812  T
Q  148 tgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||||| | || |||||| | ||||||| | |||||||||||| |||||    
T  39593811 tgtatcactcttatcatagtgaagtggagagat-ctctctcccccagagtag 39593761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 5269204 - 5269250
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctccccca 5269250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 28468542 - 28468584
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||||| ||||||||| |||||||||||||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcc 28468584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 11853659 - 11853695
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11853659 ttcattatagtggatcggagagctgctctctccccca 11853695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 18587078 - 18587113
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  18587078 tcattatagtggatcggagagctgctctctccccca 18587113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 36175290 - 36175242
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaa 97  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  36175290 ttttctcataggattcattgtgagtgtg--tgacttagaaaatgggtagaa 36175242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 55822375 - 55822409
Alignment:
Q  157 ttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||||| |||||||||||||||||||    
T  55822375 ttcattatagtggatcggagagctgctctctcccc 55822409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 5147824 - 5147715
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| | ||| ||||| ||| |||||  ||| || |||||||| ||   |||||| ||||||||| ||| |||| ||||||||||||    
T  5147824 aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgct 5147725  T
Q  184 ctctccccca 193  Q
    | ||||||||    
T  5147724 ccctccccca 5147715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 5336850 - 5336809
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||  ||||||||||||||||||| |||||||    
T  5336850 tcattatagtggaacggagagctgctctctcccctatagtag 5336809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 10113134 - 10113167
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||| ||||||||||||||||||||    
T  10113134 tcattatagtggaatggagagctgctctctcccc 10113167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 13072051 - 13072014
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccata 195  Q
    |||||||||| || ||||||||||||||||||||||||    
T  13072051 tcattatagtagaatggagagctgctctctcccccata 13072014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 873431 - 873571
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||| || | | ||||| ||||| |||||  ||| ||| |||||| ||| |  || || |||| ||||||||||| ||||||||||| |||  |    
T  873431 ttttctcttaagacttaatgtgactgtgggtgactcgaaatatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctat 873530  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctct 187  Q
    | |||||| | | || ||||||||| |||||| ||||||||    
T  873531 tggtatcattctaatcatagtggatcggagagttgctctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 22819615 - 22819468
Alignment:
Q  45 ttttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 144  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||| ||||| ||| |||||||||||||||||||   ||| ||||||||||| || |    
T  22819615 ttttttctcttaggattcattgagagtgtgggtgacttgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactc 22819516  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccc 192  Q
     ||||||||||||||||  | ||||||||||| ||| |||||||||||    
T  22819515 atttgtatcactttcatcttggtggattggagggctactctctccccc 22819468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 32736909 - 32737061
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |  || |||||| ||| |||||||| |||||| |||| ||| ||    
T  32736909 ttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattttttgtaacctct 32737008  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||||| ||||| ||||| |||  ||||| | ||||||| |||| |||||    
T  32737009 ttgtatcaccttcatcatagttgatcagagagtttctctctctcccagagtag 32737061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 47703848 - 47703995
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| |      
T  47703848 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaatt 47703945  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctccccca 47703995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 17345432 - 17345576
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||| ||||||||  |||||||| ||||||||||||||||||||| ||| || || ||||||||| ||| ||| | |||||||||||  | | |    
T  17345432 ttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgtagcacat 17345531  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||| ||| |||||  ||||||||||||||||| |||| |||||    
T  17345532 ttgtaccacgttcatcttagtggattggagagctcctctttcccc 17345576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 35109450 - 35109556
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||| ||||||||||||||||||||  |||||| |||| ||||||||| |||||  || ||||||||||||||||||| ||||||||||| |||  |    
T  35109450 ttttctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggtttgttctttgtgagcttttaagctaatttcttgtaacctat 35109549  T
Q  147 ttgtatc 153  Q
    |||||||    
T  35109550 ttgtatc 35109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 16124466 - 16124575
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  16124566 ctctccccca 16124575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 29651997 - 29651849
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| |     
T  29651997 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaat 29651900  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  29651899 tcttttgtaacactttcatcatagtggattggagtgctgctctctccccca 29651849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 9023789 - 9023885
Alignment:
Q  84 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagct 180  Q
    |||| ||||||||| ||| ||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||  |||||||||||||||||    
T  9023789 aaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagct 9023885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 13598584 - 13598436
Alignment:
Q  47 ttttctcttaggattcat---tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||   || |||||||| ||||  | |||||| |||||| ||||||||| ||||| ||| ||||| |||| |||||||||||  |    
T  13598584 ttttctcttaggattcatcattgagagtgtgggtgac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatc 13598487  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  13598486 tcttttgtaacactttcatcatagtggattgaagggctgctctctccccca 13598436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 19073075 - 19072966
Alignment:
Q  85 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  19072975 ctctccccca 19072966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 19120965 - 19120856
Alignment:
Q  85 aaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| || || |||||| || ||||| |||| ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  19120865 ctctccccca 19120856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 27104362 - 27104431
Alignment:
Q  124 taaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctccccca 27104431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19358852 - 19358904
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19358852 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccata 19358904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19361441 - 19361493
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19361441 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccata 19361493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19380081 - 19380133
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19380081 ccctttgtaacactttcatcatagtggattggagagctgctctctcccccata 19380133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 21536580 - 21536628
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21536580 ctttgtaacactttcattatagtggattggagagctgctctctccccca 21536628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 191
Target Start/End: Complemental strand, 9476408 - 9476301
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||| ||||| ||| ||||| ||||| ||| ||||| |||| ||||||||| | || | ||||||  |||||||| |||||||||||||||||||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  184 ctctcccc 191  Q
    ||||||||    
T  9476308 ctctcccc 9476301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 24202778 - 24202828
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  24202778 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 24202828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 3281853 - 3281746
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| || |||||||||||||||||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  185 tctccccca 193  Q
    |||||||||    
T  3281754 tctccccca 3281746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 26644849 - 26644956
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| ||||| ||||| ||| |||||  ||| || |||||||| || | |||||| ||||||||| ||| ||||||||||||||||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  185 tctccccca 193  Q
    |||||||||    
T  26644948 tctccccca 26644956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 32889624 - 32889477
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaattt-cttgttaccc 144  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| ||||| ||| |||||  ||| || ||| ||||| || |    
T  32889624 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactc 32889525  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     || ||| |||||||||  |||||||||||||||||||||| |||||||    
T  32889524 att-gtaacactttcatcttagtggattggagagctgctctatccccca 32889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 918392 - 918535
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatg-acttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||||| || ||  || | || |||||||||||||| ||| |  || ||||||||||| || |||| ||||||||||| |   |    
T  918392 ttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaatatc 918491  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||||||||||| | || ||||||| |||||||| | ||||||||    
T  918492 tttgtatcactcttatcatagtggtttggagagtttctctctcc 918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 47098738 - 47098883
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||| ||||||| ||||||| |||||||| |||  | |||| ||||||||| ||| | ||| |||||| || ||||| |||| ||||||||||| || |     
T  47098738 ttttttcttaggtttcattgagagtgtgggtgatgtgaaaa-tgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaactca 47098836  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    || ||| |||||||||  ||||||||||||| ||||||||||||||||    
T  47098837 tt-gtaacactttcatcttagtggattggagggctgctctctccccca 47098883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 13604634 - 13604684
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||    
T  13604634 ctttgtaacattttcatcatagtggattggagagctgctctctcccccata 13604684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 40816729 - 40816841
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||   | ||||| |||||| ||| ||||| ||| ||||| ||||| |||| ||||||||||| || |     
T  40816729 ttttctcttaggattcattgagagtgtgggtgac---acaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 40816825  T
Q  146 tttgtatcactttcat 161  Q
    |||||| |||||||||    
T  40816826 tttgtaacactttcat 40816841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 11031386 - 11031433
Alignment:
Q  46 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggt 93  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  11031386 tttttctcttaggatacattgtgagtgtgaatgacttgaaaaatgggt 11031433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 11032270 - 11032357
Alignment:
Q  84 aaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggat 171  Q
    |||||||||||||| ||| || || ||||||||||| ||||||  ||||||||||| ||| |||| ||||||| | || |||||||||    
T  11032270 aaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggat 11032357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 48382457 - 48382524
Alignment:
Q  110 tctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggaga 177  Q
    ||||||||| ||| |||| ||||||||||| |||  |||||||||||||||| ||| |||||||||||    
T  48382457 tctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 10997141 - 10997031
Alignment:
Q  46 tttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||| ||||||||||  ||||||| || |||||| |||||||||||||| ||| |  || || ||||| | |||||||| ||||||||||| ||       
T  10997141 tttttcttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaagttaatttcttgtaacata 10997042  T
Q  146 tttgtatcact 156  Q
    |||||||||||    
T  10997041 tttgtatcact 10997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 9022817 - 9022857
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaa 87  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  9022817 ttttctcttaggattcattgtgagtgtggttgacttgaaaa 9022857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 37069856 - 37069808
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||||||||||    
T  37069856 ctttgtaacactttcatcatagtggatcggagagatgctctctccccca 37069808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 775757 - 775710
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctccccca 775710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 21353418 - 21353383
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  21353418 tcattatagtggatcggagagctgctctctccccca 21353383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 9314713 - 9314672
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||  ||| |||||||||||||||||||||||    
T  9314713 tcattatagtggaacggatagctgctctctcccccatagtag 9314672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 9521827 - 9521864
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccata 195  Q
    |||||||||||||  |||||||||||||||||||||||    
T  9521827 tcattatagtggaacggagagctgctctctcccccata 9521864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 8281502 - 8281410
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgt 139  Q
    ||||||||| |||||||||||||||| || ||||||||| ||| | ||||| |||    || ||||||||||||  ||| | |||||||||||    
T  8281502 ttttctctttggattcattgtgagtgcgggtgacttaaataattgatagaaattagaatttgttctttgtgagcgattatgttaatttcttgt 8281410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 4386851 - 4386982
Alignment:
Q  68 gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagt 167  Q
    |||||||| |||||| ||||||| |||||| ||| || || ||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||  || |    
T  4386851 gagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttatt 4386950  T
Q  168 ggattggagagctgctctctcccccatagtag 199  Q
    |||||||||||||||||||||||||| |||||    
T  4386951 ggattggagagctgctctctcccccagagtag 4386982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 18552787 - 18552932
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  18552787 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 18552884  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  18552885 tttgtaacactttcatcatagtggattggagggctgctctctccccca 18552932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 40844834 - 40844691
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  40844834 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 40844737  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  40844736 tttgtaacactttcatcatagtggatttgagggctgctctctcccc 40844691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 8370390 - 8370535
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||   | |||||||||||| ||| ||||| ||||| ||| |||||||||| ||||||||||| ||     
T  8370390 ttttctcttaggattcatattgtgagagtgggtgac---acaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaact 8370486  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    | |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8370487 c-tttgtaacactttcatcatagtggattggagagctgctctctccccca 8370535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 25795964 - 25795819
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  25795964 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactct 25795867  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    || ||| |||||||||  |||| |||||||||||||||||||||||||    
T  25795866 ttcgtaacactttcatcttagtagattggagagctgctctctccccca 25795819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 21353746 - 21353604
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    |||||||||| |||||||||| ||||||  || | | |||||||||||||| ||| ||  | ||||||||||||| ||  | ||||||||||| || | |    
T  21353746 ttttctcttaagattcattgtaagtgtgagtggcatgaaaaatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcat 21353647  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  21353646 ttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 1736245 - 1736354
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| ||||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  1736345 ctctccccca 1736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 48438400 - 48438252
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| || | ||||||||||| ||    
T  48438400 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaac 48438303  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  48438302 tcttttgtaacactttcatcatagtggattggagggctgctctctccccca 48438252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 3715904 - 3716046
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||  |||| ||||  | ||||||||||||| ||||||||| ||||| ||| || || |||| ||||||||||| ||     
T  3715904 ttttctcttaggattcatattgtgaaagtgggtgac--acaaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaact 3716001  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctc 188  Q
    | |||||| ||||||||| ||||| ||||||||||||||||||||    
T  3716002 cttttgtaacactttcatcatagtagattggagagctgctctctc 3716046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 5366226 - 5366351
Alignment:
Q  47 ttttctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||| |||||||||||||  | ||||||| |||||  ||||| |||||||| |||||  || ||| ||||||| ||||||| ||||||||||| ||| |    
T  5366226 ttttcgcttaggattcatttattagtgtgggtgactagaaaaaagggtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctc 5366325  T
Q  146 tttgtatcactttcattatagtggat 171  Q
    |||||||||||||||| |||||||||    
T  5366326 tttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 36029240 - 36029131
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| ||||| ||||| ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||||||||||    
T  36029240 aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 36029141  T
Q  184 ctctccccca 193  Q
     |||||||||    
T  36029140 ttctccccca 36029131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 21711368 - 21711261
Alignment:
Q  86 aaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctc 184  Q
    |||||||||||| ||| |||||  |||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| |||||||||| |||||||||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  185 tctccccca 193  Q
    |||||||||    
T  21711269 tctccccca 21711261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 26299171 - 26299026
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||||||| |||| || ||||| ||||  | ||||||||||||| ||| ||||| ||||| | | || || |||| ||||||||||| || |     
T  26299171 ttttctcttaggattaattgagattgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactct 26299074  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  26299073 tttgtaacactttcatcatagtagattggagggctgctctctccccca 26299026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 8126814 - 8126685
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||| ||||||||| |||||||| ||||  ||||| ||||||||| |||||| || |||||| || ||||| |||| ||||||||||| || |     
T  8126814 ttttctcttaagattcattgagagtgtgggtgacacaaaaa-tgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactct 8126716  T
Q  146 tttgtatcactttcattatagtggattggag 176  Q
    |||||| |||||||||  |||||||||||||    
T  8126715 tttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 24695068 - 24695210
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||| ||||||||||||| |||||||| ||||  | ||||||||||||| ||| ||||| |||||| || || || |||| ||||||||||| || |     
T  24695068 ttttcttttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactct 24695165  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
    |||||| ||||||||| |||| ||||| ||| | |||||||||||    
T  24695166 tttgtaacactttcatcatagcggattagagggttgctctctccc 24695210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 29100342 - 29100193
Alignment:
Q  50 tctcttaggattcattg-tgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccccttt 148  Q
    ||||||| ||||||||  ||||||| | |||||| ||||| | |||||| ||| |  || ||||||||||| ||||||| ||||||||| | ||| ||||    
T  29100342 tctcttatgattcatttatgagtgtaggtgacttgaaaaacgagtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctcttt 29100243  T
Q  149 gtatcact-ttcattatagtggattggagagctgctctctcccccatagt 197  Q
    |||||||| || || |||||||| |||||||||||||||| ||| |||||    
T  29100242 gtatcactctttatcatagtggaatggagagctgctctcttccctatagt 29100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 30709691 - 30709839
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | || |||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| ||    
T  30709691 ttttctcttaggattcattattgagagtgtgggtgac--acaagatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaac 30709788  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| || |||||| |||||||||||||| ||||||||||||||||    
T  30709789 tcttttgtaacaatttcatcatagtggattggagggctgctctctccccca 30709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 40592684 - 40592828
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||  | ||||||||||||| |||  | || ||||| ||| ||||| |||| ||||||||||| ||     
T  40592684 ttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaact 40592781  T
Q  144 cctttgtatcactttcattatagtggattggagagctgctctctccc 190  Q
    | |||||| ||||||||| ||||| |||||||||||| |||||||||    
T  40592782 cttttgtaacactttcatcatagtcgattggagagcttctctctccc 40592828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 3328259 - 3328401
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||| ||||| |||||||| |||  | |||||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||| || | |    
T  3328259 ttttctcttaggatacattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttg-taactc 3328357  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
     ||||| |||||||||  |||||||||| || ||||||||||||    
T  3328358 attgtaacactttcatcttagtggattgaagggctgctctctcc 3328401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 6794714 - 6794764
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  6794714 ctttgtaacactttcatcatagtggattggagagctgctctctcccccata 6794764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 32143409 - 32143359
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  32143409 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 32143359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 27453046 - 27452997
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccc 192  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  27453046 ccctttgtaacactttcatcatagtggattggagagctgctctctccccc 27452997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 16264436 - 16264388
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16264436 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 16264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 27974953 - 27975001
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27974953 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 27975001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 1417393 - 1417539
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| |||  | |||||||||||||| ||| | ||| ||| ||||| || || |||| |||||||||  || | |    
T  1417393 ttttctcttaggattcattgggagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttctt-ataactc 1417491  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     ||||| ||||||| |  ||||||||||||| | ||||||||||||||    
T  1417492 attgtaacactttcttcttagtggattggagggatgctctctccccca 1417539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 3323593 - 3323739
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattc-tttgtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||| |||||||| |||||||| |||  | || ||||||||||| ||| | ||| ||| ||||| ||||| |||| |||||||||| || | |    
T  3323593 ttttctcttagaattcattgagagtgtgggtgatatgaacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttg-taactc 3323691  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     ||||| |||||||||  ||||||||||||| |||| |||||| ||||    
T  3323692 attgtaacactttcatcttagtggattggagggctgttctctctccca 3323739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 2671595 - 2671645
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  2671595 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 2671645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 7167332 - 7167282
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  7167332 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 7167282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 8477450 - 8477400
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  8477450 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 8477400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 8739072 - 8739122
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  8739072 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 8739122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 9091310 - 9091360
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  9091310 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 9091360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 26928600 - 26928650
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  26928600 ccctttgtaacactttcatcatagtggattggagagttgctctctccccca 26928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 27986449 - 27986495
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctccccca 27986495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 33386669 - 33386715
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctccccca 33386715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 40372804 - 40372854
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  40372804 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 40372854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 47923806 - 47923953
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtg--agcttttaaggtaatttcttgtta 141  Q
    ||||||| ||||||||||| |   |||||||||||||  | |||||||||| || ||| || ||  ||||||||  | |||||||| ||||||||||| |    
T  47923806 ttttctcgtaggattcattattgagagtgtggatgac--acaaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaa 47923903  T
Q  142 cccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    | | |||||| ||||||||| ||||| ||||| || ||||||||||||||    
T  47923904 ctcttttgtagcactttcatcatagtagattgaagggctgctctctcccc 47923953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 25517159 - 25517076
Alignment:
Q  54 ttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttctt 137  Q
    ||||| |||| ||||||||||| |||||| ||||||  |||||| ||| |  || ||||||||||||||||||| |||||||||    
T  25517159 ttagggttcactgtgagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttctt 25517076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 38210564 - 38210597
Alignment:
Q  162 tatagtggattggagagctgctctctcccccata 195  Q
    ||||||||||||||||||||||||||||||||||    
T  38210564 tatagtggattggagagctgctctctcccccata 38210597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 1306036 - 1305988
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||| |||||||||  |||||||||||||||||||| |||||||    
T  1306036 ccctttgtaacactttcatcgtagtggattggagagctgctatctcccc 1305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 6303420 - 6303456
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6303420 ttcattatagtggatcggagagctgctctctccccca 6303456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 10094146 - 10094110
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10094146 ttcattatagtggatcggagagctgctctctccccca 10094110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 10100163 - 10100127
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10100163 ttcattatagtggatcggagagctgctctctccccca 10100127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 10201026 - 10200990
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10201026 ttcattatagtggatcggagagctgctctctccccca 10200990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 23392063 - 23391989
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    |||||| |||||| |||||| || ||||||||||||||  ||||| ||||||||||| |||| |||||||||||||    
T  23392063 aaaatgagtagaaattaagt-ttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 10897117 - 10897152
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  10897117 tcattatagtggatcggagagctgctctctccccca 10897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 54193338 - 54193373
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  54193338 tcattatagtggatcggagagctgctctctccccca 54193373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 193
Target Start/End: Complemental strand, 37466438 - 37466329
Alignment:
Q  84 aaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 182  Q
    |||||||||||||| ||| | ||| |||||| || ||||| |||  ||||||||||| || | || ||| |||||||||  ||||||||||||| ||| |    
T  37466438 aaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtggattggagggctac 37466340  T
Q  183 tctctccccca 193  Q
    |||||||||||    
T  37466339 tctctccccca 37466329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 10208072 - 10208039
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccc 190  Q
    ||||||||||||||| ||||||||||||||||||    
T  10208072 ttcattatagtggatcggagagctgctctctccc 10208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 10595104 - 10595067
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccccata 195  Q
    |||||||||||||  |||||||||||||||||||||||    
T  10595104 tcattatagtggaacggagagctgctctctcccccata 10595067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 25929299 - 25929332
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgac 80  Q
    ||||||||||||||||||||||||||||| ||||    
T  25929299 ttttctcttaggattcattgtgagtgtgggtgac 25929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 25929445 - 25929490
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||||||  ||||||||||||| ||||||||| ||||    
T  25929445 tttgtatcactttcatcttagtggattggagggctgctctcccccc 25929490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 27544383 - 27544416
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccc 190  Q
    ||||||||||||||| ||||||||||||||||||    
T  27544383 ttcattatagtggatcggagagctgctctctccc 27544416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 35925663 - 35925529
Alignment:
Q  47 ttttctcttaggattcat--tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacc 143  Q
    ||||||||||||||||||  |||||| |||| ||||   | |||||||||||| ||| || || ||||  ||| ||||| |||  ||||||||||| ||     
T  35925663 ttttctcttaggattcatattgtgagagtgggtgac---acaaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaact 35925567  T
Q  144 cctttgtatcactttcattatagtggattggagagctgc 182  Q
    | |||||| ||||||||| ||||||||||||||| ||||    
T  35925566 c-tttgtaacactttcatcatagtggattggagaactgc 35925529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 54188621 - 54188654
Alignment:
Q  158 tcattatagtggattggagagctgctctctcccc 191  Q
    |||||||||||||| |||||||||||||||||||    
T  54188621 tcattatagtggatcggagagctgctctctcccc 54188654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| ||||  ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  760861 aaaatgggtagaaattaggtctg-ttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  22835156 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 23410483 - 23410409
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || |||||||||||||||||  ||||| ||||||| | | |||| |||||||||||||    
T  23410483 aaaatgggtagaaattatgt-ttattctttgtgagcttgtttaagctaatttcgtataacccatttgtatcacttt 23410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 29682373 - 29682447
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagctt--ttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| ||| || || ||||||||||||||  ||||| ||||||||||| |||| |||||||| ||||    
T  29682373 aaaatgggtagaaattatgt-ttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt 29682447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctttgtgagct--tttaaggtaatttcttgttacccctttgtatcacttt 158  Q
    ||||||||||||| |||||| || |||||||||||||  || ||| ||||||||||| || | |||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 5572155 - 5572298
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  | |||||| |||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  5572155 ttttctcttaggattcattgagagtgtgggtgac--acaaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 5572252  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||    
T  5572253 tttgtaacactttcatcatagtggattggagggctgctctctcccc 5572298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 31086386 - 31086530
Alignment:
Q  47 ttttctcttaggattcattgt-gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttaccc 144  Q
    ||||||||||||||||||| | |||||||| ||||  | ||||||||||||| ||| |||||  |||| ||| ||||| |||| ||||||||||| || |    
T  31086386 ttttctcttaggattcattattgagtgtgggtgac--acaaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactc 31086483  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  31086484 ctttgtaacactttcatcatagtggattggagagttgctctctcccc 31086530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 31979697 - 31979551
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||| |||||||| ||||  ||||| ||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| || |     
T  31979697 ttttctcttaggattcattgagagtgtgggtgacacaaaaa-tgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactct 31979599  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||| | |||||||||  ||||||||||||| ||||||||||||||||    
T  31979598 tttgcaacactttcatcttagtggattggagggctgctctctccccca 31979551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 1115017 - 1115159
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||  ||||||||||||||||| |||||| |||||||| ||||| ||| |  || || ||| |||||||||||| | ||||||||| |||  |    
T  1115017 ttttctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaagttgatttcttgtaacctat 1115116  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    |||||||| | | || ||||||||||||||| |||||||||||    
T  1115117 ttgtatcattcttatcatagtggattggagatctgctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 10077081 - 10077224
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    |||| |||||||||||||||  ||||||| ||||  | ||||||||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||       
T  10077081 ttttatcttaggattcattg--agtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttt 10077176  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  10077177 tttgtaacactttcatcatagtggattggagggctgctctctccccca 10077224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 21801257 - 21801403
Alignment:
Q  47 ttttctcttaggattcatt-gtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttaccc 144  Q
    |||||||||||| |||||| | |||||||| ||||  | ||||||||||||| ||||||||| |||||| || ||||| |||| ||||||||||| || |    
T  21801257 ttttctcttagggttcatttgagagtgtgggtgac--acaaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactc 21801354  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     |||||| |||||| ||  ||||||||||||||||||||| ||||||||    
T  21801355 ttttgtaacacttttatcttagtggattggagagctgctcgctccccca 21801403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 31076849 - 31076996
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgact-----taaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgtta 141  Q
    |||||||||||||||||| |||| ||||| |||||     | |||||||| || || ||| ||||| |||||||||| || ||||| |||||| |||| |    
T  31076849 ttttctcttaggattcatagtgattgtgggtgacttgaaattaaaaatggataaaaattaggtcttgttctttgtgaactcttaagctaatttattgtaa 31076948  T
Q  142 cccctttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    ||| ||||||||||||| ||  |||||||||||||||||||| |||||    
T  31076949 cccatttgtatcacttttatcttagtggattggagagctgctatctcc 31076996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 18233031 - 18232883
Alignment:
Q  47 ttttctcttaggattcattgt---gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||| |   |||||||| ||||  | ||||||||||||| ||| ||||| ||||| ||| ||||| |||| | ||||||||| ||    
T  18233031 ttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaac 18232934  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| |||||| ||||||| | ||||||||||||||    
T  18232933 tcttttgtaacactttcatcatagtgaattggagggttgctctctccccca 18232883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 191
Target Start/End: Complemental strand, 22963847 - 22963739
Alignment:
Q  83 aaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 182  Q
    ||||||||||||||| ||| | ||| || | ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| |||||    
T  22963847 aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgc 22963748  T
Q  183 tctctcccc 191  Q
    |||||||||    
T  22963747 tctctcccc 22963739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 23824546 - 23824654
Alignment:
Q  83 aaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgc 182  Q
    ||||||||||||||| ||| | ||| || | ||| || || |||| ||||||||||| || | |||||| ||||||||| |||||||||||||| |||||    
T  23824546 aaaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgc 23824645  T
Q  183 tctctcccc 191  Q
    |||||||||    
T  23824646 tctctcccc 23824654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 4630138 - 4629998
Alignment:
Q  47 ttttctcttaggattcatt-gtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttaccc 144  Q
    ||||||||||||||||||| | |||| ||| ||||  | ||||| ||||||| ||| ||||| |||||| || ||||| |||| ||||||||||| ||      
T  4630138 ttttctcttaggattcatttgagagtttgggtgac--acaaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaacta 4630041  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctct 187  Q
     |||||| |||||||||  ||||||||||||||||||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctct 4629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 189
Target Start/End: Complemental strand, 14521857 - 14521716
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||||||||| |||| |||||||| |||| | ||||||| |||||| ||| ||  | ||||||||||||| ||  | |||||| |||| || | |    
T  14521857 ttttctcttaggatttattgagagtgtgggtgacatgaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttgtaactcat 14521759  T
Q  147 ttgtatcactttcattatagtggattggagagctgctctctcc 189  Q
    |||||||||||||||  || || ||||||||| ||||||||||    
T  14521758 ttgtatcactttcatcttattgaattggagaggtgctctctcc 14521716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 24435884 - 24436028
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattcttt-gtgagcttttaaggtaatttcttgttacccc 145  Q
    ||||||||||||||||||| ||| ||||| |||  |||||| ||||||||| ||| ||||| || ||| || ||||| |||| ||||||||||| |  |     
T  24435884 ttttctcttaggattcattatgaatgtgggtgatataaaaa-tgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattca 24435982  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |||||| || ||||||  |||||||| |||| ||||||||||||||    
T  24435983 tttgtaacattttcatcctagtggatcggagggctgctctctcccc 24436028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 5757489 - 5757537
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5757489 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 5757537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 30518058 - 30518165
Alignment:
Q  64 ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccctttgtatcactttcatta 163  Q
    |||||||||||| | |||| |||||| ||||||| |||||  || |||||||||| |||||||| || |||| ||| ||| |||||||||||| | || |    
T  30518058 ttgtgagtgtgggtaacttgaaaaataggtagaaattaaggtttgttctttgtgaacttttaagttagtttcatgtaacctctttgtatcactcttatca 30518157  T
Q  164 tagtggat 171  Q
    ||||||||    
T  30518158 tagtggat 30518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 5674779 - 5674829
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  5674779 ccctttgtaacactttcatcatattggattggagagctgctctctccccca 5674829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 22709102 - 22709056
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctccccca 22709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 99339 - 99248
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgt 139  Q
    ||||||| ||||||||||||||||||||  | |||| |||||||||||||| ||||   || |||| ||||||||| |||| |||||||||||    
T  99339 ttttctcataggattcattgtgagtgtgagtaactt-aaaaatgggtagaaattaaagtttgttctctgtgagcttctaagctaatttcttgt 99248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 33721471 - 33721624
Alignment:
Q  47 ttttctcttaggattcattgtg-agtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||  | ||||||  |||| |||||||||||   || ||| || || |||||| |||| ||||||  ||||||||||| ||| |    
T  33721471 ttttctcttaggattcatttaggagtgtgtgtgacctaaaaaatgggggaaaattaggttttgttctttatgagtttttaaactaatttcttgtaacctc 33721570  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtag 199  Q
    ||||||| | | | || |||||||||  ||||| || ||||| |||||||||||    
T  33721571 tttgtataattcttatcatagtggatcagagagttgttctcttccccatagtag 33721624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 13878837 - 13878873
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13878837 ttcattatagtggatcggagagctgctctctccccca 13878873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 13883585 - 13883621
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13883585 ttcattatagtggatcggagagctgctctctccccca 13883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 16786029 - 16786065
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16786029 ttcattatagtggatcggagagctgctctctccccca 16786065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 21356114 - 21356078
Alignment:
Q  153 cactttcattatagtggattggagagctgctctctcc 189  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21356114 cactttcatcatagtggattggagagctgctctctcc 21356078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 27165847 - 27165715
Alignment:
Q  68 gagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttctt-gttacccctttgtatcactttcattatag 166  Q
    |||||||| | |||| |||||||| ||||| || ||| || |||| | | |||| ||| | |||||| || || ||||| |||||||||||||||  |||    
T  27165847 gagtgtgggtaacttcaaaaatggatagaaattcagttttgttctctataagctcttatgctaatttttttgtaaccccgttgtatcactttcatcttag 27165748  T
Q  167 tggattggagagctgctctctcccccatagtag 199  Q
    | |||||||| ||| |||| |||||||||||||    
T  27165747 ttgattggagggctactctgtcccccatagtag 27165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 31936671 - 31936625
Alignment:
Q  147 ttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctccca 31936625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 31936761 - 31936711
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaa 97  Q
    |||||||||||||||||||| |||||||| |||  | ||||||||||||||    
T  31936761 ttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaa 31936711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 35201398 - 35201364
Alignment:
Q  157 ttcattatagtggattggagagctgctctctcccc 191  Q
    ||||||||||||||| |||||||||||||||||||    
T  35201398 ttcattatagtggatcggagagctgctctctcccc 35201364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 11857058 - 11857010
Alignment:
Q  146 tttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    |||||| ||||||| | ||| |||||||||||||||||||||||||||||    
T  11857058 tttgtaacactttc-tcatattggattggagagctgctctctcccccata 11857010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 5273282 - 5273250
Alignment:
Q  161 ttatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||||| ||||||||||||||||    
T  5273282 ttatagtggattggagggctgctctctccccca 5273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 50; Significance: 8e-20; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 5869 - 5721
Alignment:
Q  47 ttttctcttaggattcat---tgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttac 142  Q
    ||||||||||||||||||   || |||||||| ||||  | |||||| |||||| ||||||||| ||||| ||| ||||| |||| |||||||||||  |    
T  5869 ttttctcttaggattcatcattgagagtgtgggtgac--acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatc 5772  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
     | |||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  5771 tcttttgtaacactttcatcatagtggattgaagggctgctctctccccca 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 2661 - 2530
Alignment:
Q  61 tcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttc 159  Q
    |||||| |||||||| ||||  | ||||||||||||| |||  |||| ||||| ||| ||||| |||| ||||||||| | |  | |||||| |||||||    
T  2661 tcattgagagtgtgggtgac--acaaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttc 2564  T
Q  160 attatagtggattggagagctgctctctccccca 193  Q
    || |||||||||||||| |||||| |||||||||    
T  2563 atcatagtggattggagggctgctgtctccccca 2530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 133291 - 133341
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccccata 195  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||    
T  133291 ctttgtaacattttcatcatagtggattggagagctgctctctcccccata 133341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Original strand, 224929 - 224961
Alignment:
Q  157 ttcattatagtggattggagagctgctctctcc 189  Q
    ||||||||||||||| |||||||||||||||||    
T  224929 ttcattatagtggatcggagagctgctctctcc 224961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 85829 - 85721
Alignment:
Q  85 aaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgct 183  Q
    ||||||||||||| ||| |||||  |||| ||| |||||||||| ||||||||||| || | |||||| ||||||||| || |||||||||||||| |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  184 ctctccccca 193  Q
    ||||||||||    
T  85730 ctctccccca 85721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 102407 - 102516
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttacccct 146  Q
    ||||||||| | ||| ||| ||||||||  |||||| |||||||||||||| ||| |  || || |||||||||||||||| ||||||||||| ||| ||    
T  102407 ttttctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtgagcttttaagataatttcttgtaacctct 102506  T
Q  147 ttgtatcact 156  Q
    ||||||||||    
T  102507 ttgtatcact 102516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 17961 - 18011
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  17961 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 18011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 24054 - 24104
Alignment:
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  24054 ccctttgtaacactttcatcatagtggattggagagctgctctctccccca 24104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 187
Target Start/End: Complemental strand, 17446 - 17307
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccc 145  Q
    |||||||||||||||||||  |||||||  ||||  | ||||| ||||||| ||| ||||| ||||| ||| ||||| |||| ||||||||||| || |     
T  17446 ttttctcttaggattcattaagagtgtgagtgac--acaaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactct 17349  T
Q  146 tttgtatcactttcattatagtggattggagagctgctctct 187  Q
    |||||| ||||||||| ||| |||||||||| | ||||||||    
T  17348 tttgtaacactttcatcataatggattggagggttgctctct 17307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 198
Target Start/End: Complemental strand, 14868 - 14716
Alignment:
Q  47 ttttctcttaggattca--ttgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttgttaccc 144  Q
    |||||||||||||||||  |||||||||||| |||||| |||||| ||||| |  || |  |  ||||||||||||||||||| |||||||| || |||     
T  14868 ttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaatttctcgtaacct 14769  T
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctcccccatagta 198  Q
    |||||||||||| | || ||| | ||| |||| | ||||||||| |||||||||    
T  14768 ctttgtatcactcttatcataattgatcggag-gttgctctctctcccatagta 14716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 10868 - 10767
Alignment:
Q  93 tagaagttaagtcttattctt-tgtgagcttttaaggtaatttcttgttacccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    ||||| ||| ||||| ||||| ||| ||||| |||  ||||||||||| || | |||||| |||||||||  ||||||||||||||||||||||||||||    
T  10868 tagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccc 10769  T
Q  192 ca 193  Q
    ||    
T  10768 ca 10767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 8430 - 8478
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8430 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 43972 - 44020
Alignment:
Q  145 ctttgtatcactttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  43972 ctttgtaacactttcatcatagtggattggagagctgctctctccccca 44020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 23715 - 23568
Alignment:
Q  47 ttttctcttaggattcattgtgagtgtggatgacttaaaaaatgggtagaagttaagtcttattctttgtgagcttttaaggtaatttcttg----ttac 142  Q
    ||||||||||||||||||||||||||||  |||| |  ||||||||||||| |||  |||| || ||||||||||| ||||  |||||||||    | ||    
T  23715 ttttctcttaggattcattgtgagtgtgtctgacat-gaaaatgggtagaaattagatcttgttttttgtgagcttctaagaaaatttcttgtaattaac 23617  T
Q  143 ccctttgtatcactttcattatagtggattggagagctgctctctcccc 191  Q
    |  ||||||||||||||||  ||||| |||||| |||| || |||||||    
T  23616 ctatttgtatcactttcatcttagtgaattggatagcttctttctcccc 23568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 45329 - 45291
Alignment:
Q  155 ctttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  45329 ctttcatcatagtggattggagagctgctctctccccca 45291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 3141 - 3105
Alignment:
Q  157 ttcattatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3141 ttcattatagtggatcggagagctgctctctccccca 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 17056 - 17021
Alignment:
Q  158 tcattatagtggattggagagctgctctctccccca 193  Q
    |||||||||||||| |||||||||||||||||||||    
T  17056 tcattatagtggatcggagagctgctctctccccca 17021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 193
Target Start/End: Complemental strand, 11538 - 11507
Alignment:
Q  162 tatagtggattggagagctgctctctccccca 193  Q
    ||||||||||||||||||||||||||||||||    
T  11538 tatagtggattggagagctgctctctccccca 11507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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