View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7573_high_22 (Length: 227)
Name: NF7573_high_22
Description: NF7573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7573_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 45042776 - 45042962
Alignment:
| Q |
25 |
aagaataaaatatacttaattacatgttcctttgcatacaagacaccgtcacattgatgtaagtaaaaataatttgagaacnnnnnnnnn--ggaagttt |
122 |
Q |
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| T |
45042776 |
aagaataaaatatacttaattacatgttcctttgcatacaagacaccgtcacattgatgtaagtaaaaataatttgagaacaaaaaaaaaaaggaagttt |
45042875 |
T |
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| Q |
123 |
tcaatgattgccttcagaatcgactaactgaaaaatcaattaccgacacaaacggtatatgatttaatttcttgcatattttaccat |
209 |
Q |
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| T |
45042876 |
tcaatgattgccttcagaatcgactaactgaaaaatcaattaccgacacaaacggtatatgatttaatttcttgcatattttaccat |
45042962 |
T |
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