View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7573_low_18 (Length: 294)
Name: NF7573_low_18
Description: NF7573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7573_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 16977991 - 16978031
Alignment:
| Q |
24 |
tcctcctcctcatcatcatagtgagagccagaagaactatt |
64 |
Q |
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| T |
16977991 |
tcctcctcctcatcatcatagtgagagccagaagaactatt |
16978031 |
T |
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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 16978144 - 16978184
Alignment:
| Q |
177 |
tccaaatcaacaaagtttttatctttatcatcaaactcacc |
217 |
Q |
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| T |
16978144 |
tccaaatcaacaaagtttttatctttatcatcaaactcacc |
16978184 |
T |
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