View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7573_low_35 (Length: 202)
Name: NF7573_low_35
Description: NF7573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7573_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 9897997 - 9897822
Alignment:
| Q |
16 |
atattcaaaaatggctaggctataatagggatgtaatacaaacaattgacttgtcatcagggctagccaccccagtgtaatttagtcgtgctggtaaata |
115 |
Q |
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| T |
9897997 |
atattcaaaaatggctaggctataatagggatgtaatacaaacaattgacttgtcatcagggctagccaccccagtgcaatggagtcgtgctggtaaata |
9897898 |
T |
|
| Q |
116 |
tctacattgtcttagatccaaaccaaggtgcaggggaagctaaaccttgttcggtcatgcttcataatgatgtcca |
191 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9897897 |
tctacattgtcttagatccaaaccaaggggcaggggaagctaaaccttgttcggtcatgcttcataatgatgtcca |
9897822 |
T |
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