View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7576_high_11 (Length: 234)
Name: NF7576_high_11
Description: NF7576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7576_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 5116610 - 5116408
Alignment:
| Q |
19 |
gttgaggcttttgatttcatgttattctcgcttatctcaaaattacaggttggttgagaagttccatgatcttaagaatggttgaatatgcattttctct |
118 |
Q |
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| T |
5116610 |
gttgaggcttttgatttcatgttattctcgtttatctcaaaattacaggttggttgagaagttccatgatcttaagaatggttgaatatgccttttctct |
5116511 |
T |
|
| Q |
119 |
tgtttcaaacgttctgattaaacttctttcatcttaaaacagggctagagttgcattaataacttatcttccaaacagactcaaagatgccaatctcatc |
218 |
Q |
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| T |
5116510 |
tgtttcaaacgttctaattaaacttctttcatcttaaaacagggctagagttgcattaacaacttatcttccaaacaggctcaaagatgccaatctcatc |
5116411 |
T |
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| Q |
219 |
aat |
221 |
Q |
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| T |
5116410 |
aat |
5116408 |
T |
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