View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7576_low_3 (Length: 430)
Name: NF7576_low_3
Description: NF7576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7576_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 15 - 421
Target Start/End: Original strand, 25740686 - 25741092
Alignment:
| Q |
15 |
aataacttccctttgtaaacacatccaaaacttccagcaccaattttatttcccaatgagaaattgtcactagctgcaactaactcccaaaatgtgaaat |
114 |
Q |
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| T |
25740686 |
aataacttccctttgtaaacacatccaaaacttccagcaccaattttatttcccaatgagaaattgtcactagctgcaactaactcccaaaatgtgaaat |
25740785 |
T |
|
| Q |
115 |
tttctgttctgtctaattgctttgaagatgaaccacttcttaatctacttgaactatgtcttttactagaaaaagatcttaacgccgttgttccaatatt |
214 |
Q |
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| T |
25740786 |
tttctgttctgtctaattgctttgaagatgaaccacttcttaatctacttgaactatgtcttttactagaaaaagatcttaacgccgttgttccaatatt |
25740885 |
T |
|
| Q |
215 |
cggcattggagctatatcaacataagcatcatcagattcactacttgtaggttgaacagaattatcgattttcgcctttaacaattttcttgcaccaatc |
314 |
Q |
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| T |
25740886 |
cggcattggagctatatcaacataagcatcatcagattcactacttgtaggttgaacagaattatcgattttcgcctttaacaattttcttgcaccaatc |
25740985 |
T |
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| Q |
315 |
ataagaaaataaagaaaagtgcataaaccagaaaaagcaccaactgatccaataatcataaataccatcaatttccaacctctcaagttagttttttctt |
414 |
Q |
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| T |
25740986 |
ataagaaaataaagaaaagtgcataaaccagaaaaagcaccaactgatccaataatcataaataccatcaatttccaacctctcaagttagttttttctt |
25741085 |
T |
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| Q |
415 |
caacacc |
421 |
Q |
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| T |
25741086 |
caacacc |
25741092 |
T |
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