View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7577_1D_low_12 (Length: 330)

Name: NF7577_1D_low_12
Description: NF7577_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7577_1D_low_12
NF7577_1D_low_12
[»] chr7 (28 HSPs)
chr7 (15-313)||(35444050-35444353)
chr7 (132-199)||(20243264-20243332)
chr7 (124-204)||(44558755-44558834)
chr7 (132-187)||(21134437-21134492)
chr7 (136-204)||(8290449-8290518)
chr7 (132-204)||(19416523-19416595)
chr7 (132-204)||(23154575-23154647)
chr7 (133-185)||(34722020-34722072)
chr7 (133-204)||(37624553-37624624)
chr7 (126-185)||(5483333-5483392)
chr7 (132-187)||(9522921-9522975)
chr7 (132-199)||(10244736-10244802)
chr7 (160-199)||(20479879-20479917)
chr7 (134-204)||(36343515-36343586)
chr7 (136-187)||(44651963-44652014)
chr7 (126-199)||(4406697-4406771)
chr7 (142-199)||(8084446-8084503)
chr7 (134-199)||(37235322-37235387)
chr7 (124-186)||(47171569-47171631)
chr7 (122-171)||(41250061-41250109)
chr7 (124-168)||(19793805-19793849)
chr7 (132-204)||(24099216-24099287)
chr7 (132-199)||(27462421-27462488)
chr7 (121-157)||(29488404-29488440)
chr7 (121-157)||(33232738-33232774)
chr7 (121-157)||(34284880-34284916)
chr7 (132-199)||(36769159-36769227)
chr7 (136-168)||(44473326-44473358)
[»] chr8 (24 HSPs)
chr8 (112-199)||(37749984-37750071)
chr8 (121-170)||(26991772-26991820)
chr8 (132-204)||(9663034-9663106)
chr8 (121-171)||(29652216-29652265)
chr8 (141-187)||(34645083-34645129)
chr8 (132-204)||(39433419-39433491)
chr8 (132-204)||(33451330-33451401)
chr8 (124-179)||(22948087-22948141)
chr8 (147-201)||(22975826-22975881)
chr8 (133-187)||(11052986-11053039)
chr8 (126-199)||(19260564-19260637)
chr8 (132-178)||(24195258-24195303)
chr8 (134-199)||(30218214-30218279)
chr8 (133-186)||(1764953-1765005)
chr8 (135-199)||(12748913-12748977)
chr8 (132-204)||(23852920-23852992)
chr8 (126-187)||(39525381-39525442)
chr8 (134-201)||(12800883-12800950)
chr8 (133-204)||(13577086-13577157)
chr8 (121-157)||(20665704-20665740)
chr8 (132-199)||(36059346-36059414)
chr8 (132-199)||(38139247-38139315)
chr8 (132-172)||(44068005-44068045)
chr8 (135-175)||(44087250-44087290)
[»] scaffold0743 (1 HSPs)
scaffold0743 (135-204)||(1399-1468)
[»] chr2 (32 HSPs)
chr2 (121-187)||(19595476-19595542)
chr2 (124-204)||(19976154-19976235)
chr2 (121-199)||(16221331-16221409)
chr2 (124-204)||(25186222-25186302)
chr2 (136-207)||(21870872-21870944)
chr2 (124-209)||(35287639-35287724)
chr2 (133-205)||(2256981-2257053)
chr2 (121-185)||(17280948-17281011)
chr2 (124-199)||(21482504-21482579)
chr2 (132-199)||(27411101-27411168)
chr2 (132-199)||(33063995-33064062)
chr2 (146-185)||(13143131-13143169)
chr2 (124-171)||(29734692-29734738)
chr2 (124-187)||(39761439-39761500)
chr2 (132-198)||(42066721-42066787)
chr2 (132-205)||(7052782-7052856)
chr2 (121-199)||(16439346-16439424)
chr2 (121-191)||(25626018-25626087)
chr2 (126-199)||(29133469-29133542)
chr2 (132-186)||(39068707-39068760)
chr2 (147-204)||(5676763-5676819)
chr2 (132-204)||(9383189-9383261)
chr2 (133-170)||(19159951-19159987)
chr2 (124-169)||(37119274-37119318)
chr2 (132-204)||(41778924-41778996)
chr2 (121-157)||(3708377-3708413)
chr2 (132-199)||(6765619-6765686)
chr2 (133-196)||(9547397-9547460)
chr2 (121-157)||(11869003-11869039)
chr2 (124-184)||(12124546-12124605)
chr2 (132-199)||(24592831-24592898)
chr2 (121-157)||(35360396-35360432)
[»] chr1 (34 HSPs)
chr1 (133-199)||(14907021-14907087)
chr1 (133-209)||(5552977-5553052)
chr1 (132-195)||(24752636-24752700)
chr1 (124-199)||(7158774-7158849)
chr1 (132-199)||(42888584-42888651)
chr1 (133-199)||(45774584-45774651)
chr1 (124-170)||(3393583-3393628)
chr1 (133-187)||(20006080-20006134)
chr1 (132-204)||(52441491-52441563)
chr1 (155-199)||(2684422-2684466)
chr1 (124-199)||(34521175-34521250)
chr1 (132-199)||(39452469-39452537)
chr1 (134-177)||(925434-925477)
chr1 (132-171)||(15549250-15549289)
chr1 (132-187)||(21965889-21965944)
chr1 (134-189)||(28053236-28053291)
chr1 (133-187)||(7550906-7550959)
chr1 (124-186)||(29233973-29234034)
chr1 (126-199)||(39879210-39879284)
chr1 (124-178)||(44641528-44641581)
chr1 (117-171)||(45701322-45701375)
chr1 (133-206)||(2884427-2884499)
chr1 (132-204)||(3509921-3509993)
chr1 (120-157)||(25942679-25942716)
chr1 (133-170)||(29450996-29451033)
chr1 (136-204)||(32944749-32944817)
chr1 (123-199)||(40227829-40227905)
chr1 (132-204)||(42045352-42045424)
chr1 (133-178)||(48646732-48646777)
chr1 (142-186)||(2665301-2665345)
chr1 (133-185)||(13953874-13953925)
chr1 (147-199)||(29251778-29251829)
chr1 (133-204)||(32962573-32962644)
chr1 (134-166)||(50727305-50727337)
[»] chr6 (16 HSPs)
chr6 (134-199)||(12700406-12700471)
chr6 (124-187)||(34828307-34828370)
chr6 (134-187)||(9111058-9111110)
chr6 (133-204)||(13496126-13496197)
chr6 (133-198)||(2445309-2445374)
chr6 (133-187)||(2726415-2726468)
chr6 (126-199)||(6018644-6018718)
chr6 (132-199)||(24269892-24269960)
chr6 (124-178)||(28231432-28231485)
chr6 (121-187)||(33975927-33975993)
chr6 (132-204)||(655729-655801)
chr6 (133-170)||(12904332-12904368)
chr6 (124-204)||(24623297-24623377)
chr6 (121-157)||(247343-247379)
chr6 (132-204)||(4494852-4494923)
chr6 (132-164)||(14036299-14036331)
[»] chr4 (29 HSPs)
chr4 (132-204)||(3936636-3936708)
chr4 (133-199)||(56361798-56361865)
chr4 (132-204)||(35287487-35287559)
chr4 (132-199)||(9946436-9946503)
chr4 (121-204)||(11949743-11949826)
chr4 (124-199)||(28435233-28435308)
chr4 (133-199)||(11144650-11144716)
chr4 (132-187)||(19479475-19479529)
chr4 (132-187)||(40849663-40849718)
chr4 (126-199)||(18138265-18138339)
chr4 (133-187)||(34033343-34033396)
chr4 (126-199)||(49125474-49125548)
chr4 (124-177)||(19935169-19935221)
chr4 (125-170)||(22040652-22040696)
chr4 (115-168)||(24675086-24675138)
chr4 (132-204)||(8020629-8020699)
chr4 (121-157)||(10262110-10262146)
chr4 (132-204)||(12698606-12698677)
chr4 (121-157)||(19587837-19587873)
chr4 (123-171)||(20403182-20403229)
chr4 (121-157)||(21562309-21562345)
chr4 (121-157)||(24080181-24080217)
chr4 (132-199)||(24664976-24665043)
chr4 (132-199)||(26097722-26097790)
chr4 (132-199)||(29099694-29099762)
chr4 (132-199)||(38453274-38453341)
chr4 (121-157)||(43329830-43329866)
chr4 (132-199)||(52620573-52620641)
chr4 (132-199)||(54857600-54857667)
[»] scaffold0735 (1 HSPs)
scaffold0735 (132-199)||(1537-1604)
[»] chr5 (25 HSPs)
chr5 (123-199)||(25385052-25385127)
chr5 (132-187)||(16166373-16166428)
chr5 (117-199)||(26655458-26655540)
chr5 (117-199)||(26927043-26927125)
chr5 (133-199)||(31561329-31561395)
chr5 (133-199)||(18589853-18589918)
chr5 (133-201)||(5150065-5150134)
chr5 (132-199)||(6624785-6624852)
chr5 (132-184)||(31708147-31708198)
chr5 (133-204)||(5614775-5614845)
chr5 (124-187)||(18489074-18489136)
chr5 (133-184)||(27479631-27479682)
chr5 (133-187)||(37146999-37147053)
chr5 (136-205)||(12190005-12190073)
chr5 (132-204)||(22522781-22522853)
chr5 (132-189)||(26409262-26409318)
chr5 (132-204)||(34436860-34436932)
chr5 (132-185)||(37932339-37932391)
chr5 (132-199)||(2530019-2530087)
chr5 (132-199)||(6489016-6489083)
chr5 (133-177)||(13796340-13796383)
chr5 (133-204)||(13864354-13864425)
chr5 (145-204)||(32339757-32339816)
chr5 (121-157)||(37461795-37461831)
chr5 (132-199)||(40715934-40716001)
[»] chr3 (23 HSPs)
chr3 (132-204)||(21506740-21506810)
chr3 (132-199)||(44582733-44582801)
chr3 (133-187)||(28244102-28244155)
chr3 (132-198)||(52904130-52904195)
chr3 (132-205)||(20370261-20370333)
chr3 (132-204)||(47313351-47313424)
chr3 (132-204)||(52575956-52576028)
chr3 (132-199)||(25340909-25340976)
chr3 (133-204)||(38130939-38131010)
chr3 (133-204)||(21160062-21160132)
chr3 (132-206)||(25441478-25441552)
chr3 (132-187)||(44579645-44579699)
chr3 (123-170)||(51505873-51505919)
chr3 (132-178)||(38894046-38894091)
chr3 (132-204)||(14827534-14827606)
chr3 (133-178)||(25874140-25874185)
chr3 (132-204)||(53996308-53996380)
chr3 (121-157)||(916201-916237)
chr3 (124-164)||(5030206-5030246)
chr3 (147-199)||(25505687-25505738)
chr3 (124-164)||(40493005-40493045)
chr3 (132-172)||(40862180-40862220)
chr3 (123-187)||(54230097-54230160)
[»] scaffold0328 (1 HSPs)
scaffold0328 (124-205)||(6980-7062)
[»] scaffold0259 (1 HSPs)
scaffold0259 (126-199)||(5416-5489)
[»] scaffold0038 (1 HSPs)
scaffold0038 (124-178)||(31929-31982)
[»] scaffold0009 (1 HSPs)
scaffold0009 (133-171)||(189604-189642)
[»] scaffold0393 (1 HSPs)
scaffold0393 (147-187)||(14814-14853)
[»] scaffold0154 (1 HSPs)
scaffold0154 (136-199)||(37548-37611)


Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 313
Target Start/End: Complemental strand, 35444353 - 35444050
Alignment:
Q  15 cgttatgtaggagtaggggttcgagttttaaattatctatttatttacttaaaaataaatttttggtcaccagactttttaacaaaaatatat----cat 110  Q
    ||||||| | |||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||    
T  35444353 cgttatgcaagagtaggggttcgaattttagcttatctatttatttacttaaaaataaatttttggtcaccagactttttaacaaaaatatatatatcat 35444254  T
Q  111 gtaaaagttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaatatatc 210  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  35444253 gtaaaagttttcatgagtttagctccgttgatatgaacaatgcataataatatgcatggtcgagggtttgaaccctgccaccaccaaaagaaaatatatc 35444154  T
Q  211 atgt-nnnnnnncagctaaatattatatttttcattcgaatatttgatttaaaaacttaactaatttctttcggtattcaaaacttagctaattcaaatc 309  Q
    ||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35444153 atgtaaaaaaaacagctaaatattatatttttcattcgaatatttgatttaaaaacttaactaatttctttcggtattcaaaacttagctaattcaaatc 35444054  T
Q  310 ttta 313  Q
    ||||    
T  35444053 ttta 35444050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 20243264 - 20243332
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  20243264 gctcagttggtatggacaatgcataataatatgcaaggtccggggtttgaaccccggacaccaccaaaa 20243332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 44558834 - 44558755
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||| ||||||||| |||| |||||||||||| |||||||||||| | ||||||| ||| |||||||| |||| ||||    
T  44558834 tgagtttagctcagttggtatggacaatgcataat-atatgcaaggtctgaggtttgaccccggccaccacaaaaaaaaaa 44558755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 21134492 - 21134437
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||||||||  |||||||||||  ||||||||||||| ||||||||||||||    
T  21134492 gctcagttgatatagacaatgcataaatatatgcaaggtcgcgggtttgaaccccg 21134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 8290518 - 8290449
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||| |||| ||||||||||||||||||||||||| |||||| ||| |||| ||||||| |||| ||||    
T  8290518 agttggtatggacaatgcataataatatgcaaggtccggggttcgaatcccgaccaccacaaaaaaaaaa 8290449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 19416523 - 19416595
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||| ||||||||||| ||||||||||||| ||||||  |||||| ||||||||||||| ||||    
T  19416523 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaaccccggccaccaccaaaaaaaaa 19416595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 23154575 - 23154647
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    |||||||||||||  |||||| ||||  ||||||||||||| |||||||||||| | |||||| |||| ||||    
T  23154575 gctcagttgatatagacaatgtataaatatatgcaaggtcgcgggtttgaaccctgacaccacaaaaaaaaaa 23154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 34722072 - 34722020
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    |||||||| ||||||||||||||||||||||| |||||| | |||| ||||||    
T  34722072 ctcagttggtatgaacaatgcataataatatgtaaggtccgaggttcgaaccc 34722020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 37624553 - 37624624
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaagaaaa 204  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||| ||| |||||||| |||| ||||    
T  37624553 ctcagttggtatggacaatgcataata-tatgcaaggtcgggggttcgaatcccggccaccacaaaaaaaaaa 37624624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 5483333 - 5483392
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    ||||| ||||||||||||| ||||||| ||||  ||||||||||||| ||||| ||||||    
T  5483333 agtttagctcagttgatataaacaatgtataaatatatgcaaggtcgcgggttcgaaccc 5483392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 9522921 - 9522975
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||| ||||||||||||||||| |||||||||||  |||||| ||||||||    
T  9522921 gctcagttggtatgaacaatgcataat-atatgcaaggtttggggttcgaaccccg 9522975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 10244736 - 10244802
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||  ||||| |||||||| ||||    
T  10244736 gctcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaacccggccaccacaaaaa 10244802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 20479879 - 20479917
Alignment:
Q  160 atatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  20479879 atatgcaaggtcgggggtttgaa-cccgccaccaccaaaa 20479917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 36343586 - 36343515
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttga-accccgccaccaccaaaagaaaa 204  Q
    ||||||| |||| |||||||||||||||||||||||||  ||||| ||  |||||||||||| |||| ||||    
T  36343586 tcagttggtatggacaatgcataataatatgcaaggtccagggttcgaccccccgccaccacaaaaaaaaaa 36343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 44652014 - 44651963
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||| ||||||||    
T  44652014 agttgatataaacaatgcataaatatatgcaaggtcgcgggttcgaaccccg 44651963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 4406771 - 4406697
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||||||||  |||||||||||  ||||||||||||| | ||| ||||||| | |||||||||||    
T  4406771 agtttagctcagttgatatagacaatgcataaatatatgcaaggtcgcgagttcgaaccccggacaccaccaaaa 4406697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 8084446 - 8084503
Alignment:
Q  142 tatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||| ||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||    
T  8084446 tatggacaatgcataa-aatatgcaaggtccggggttcgaaccccggccaccaccaaaa 8084503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 37235322 - 37235387
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    |||||||||||| ||||||||| || |||||||||||| |  |||||||||||| ||||||||||||    
T  37235322 tcagttgatatggacaatgcatgat-atatgcaaggtctgaagtttgaaccccgaccaccaccaaaa 37235387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 47171569 - 47171631
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc 186  Q
    |||||||||||||| ||||| |||||||||||||  |||||| | ||| |||||| |||||||    
T  47171569 tgagtttggctcaggtgataggaacaatgcataaatatatgccaagtccggggttcgaacccc 47171631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 41250109 - 41250061
Alignment:
Q  122 catgagtttggctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    ||||||||| |||||||||||| |||||||| ||||| ||||||||||||    
T  41250109 catgagtttagctcagttgataagaacaatgtataat-atatgcaaggtc 41250061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 19793805 - 19793849
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaag 168  Q
    |||||||  ||||||||||||| ||||||||| ||||||||||||    
T  19793805 tgagtttaactcagttgatatggacaatgcatgataatatgcaag 19793849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 24099287 - 24099216
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||| ||||||| ||||||||||||| ||||| |||||  |||||||||||||  ||||||| |||| ||||    
T  24099287 gctcaattgatataaacaatgcataat-atatgtaaggttcggggtttgaacccgaccaccacaaaaataaaa 24099216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 27462488 - 27462421
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||  |||||| |||||||| ||||    
T  27462488 gctcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaaccccggccaccacaaaaa 27462421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 29488404 - 29488440
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  29488404 tcatgagtttagctcagttgataggaacaatgcataa 29488440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 33232774 - 33232738
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  33232774 tcatgagtttagctcagttgataggaacaatgcataa 33232738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 34284916 - 34284880
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  34284916 tcatgagtttagctcagttgataggaacaatgcataa 34284880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 36769159 - 36769227
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  36769159 gctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccggacaccaccaaaa 36769227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 44473358 - 44473326
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaag 168  Q
    |||||||||| ||||||||||||||||||||||    
T  44473358 agttgatatggacaatgcataataatatgcaag 44473326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 37750071 - 37749984
Alignment:
Q  112 taaaagttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  37750071 taaaagttctcgtgagtttagctcagttgatatgaacaatgcataat-atatgcaaagtccggggtttgaaccccggccaccatcaaaa 37749984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 26991820 - 26991772
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  26991820 tcatgagtttggctcagttgatatggacaatgcataat-atatgcaaggt 26991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 9663106 - 9663034
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| |||||||||||||||||| ||||||||| ||| |||| | ||||||||| ||| ||||    
T  9663106 gctcagttggtatggacaatgcataataatatgtaaggtcgggagttcgaactcagccaccacccaaaaaaaa 9663034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 29652216 - 29652265
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  29652216 tcatgagtttagctcagttgataagaacaatgcataat-atatgcaaggtc 29652265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 34645129 - 34645083
Alignment:
Q  141 atatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  34645129 atatggacaatgcataataatatgcaaggtccggggttcgaaccccg 34645083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 39433419 - 39433491
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaac-cccgccaccaccaaaagaaaa 204  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||| |||| || |||||||| |||| ||||    
T  39433419 gctcagttgatatgaacaatacataa-aatatgcaaggtctggggttcgaacgccggccaccacaaaaaaaaaa 39433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 33451401 - 33451330
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| | ||||||||||| |||||||||||  |||||||||||| |||||||| |||| ||||    
T  33451401 gctcagttggtatggataatgcataata-tatgcaaggtcaagggtttgaaccctgccaccacaaaaaaaaaa 33451330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 22948141 - 22948087
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggttt 179  Q
    |||||||||| ||||||||| | |||||||||||| |||||||||||| |||||||    
T  22948141 tgagtttggcccagttgatagggacaatgcataat-atatgcaaggtccggggttt 22948087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 22975826 - 22975881
Alignment:
Q  147 acaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaaga 201  Q
    |||||||||||  |||||||||||| ||||||| |||||| |||||||||||||||    
T  22975826 acaatgcataaatatatgcaaggtctggggtttaaaccccagccaccaccaaaaga 22975881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 11052986 - 11053039
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||  |||| ||||||||||||| ||||||||||| |||||||||||||||    
T  11052986 ctcagttagtatggacaatgcataata-tatgcaaggtccggggtttgaaccccg 11053039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 19260637 - 19260564
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| ||| |||||||||| |||||||||||| ||||| |||||| ||||||  |||||| |||||||||||||    
T  19260637 agtttagcttagttgatatgtacaatgcataat-atatgtaaggtccggggttcaaaccccggccaccaccaaaa 19260564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 24195258 - 24195303
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    |||||||||||||||||||| |||||| |||||||||||| ||||||    
T  24195258 gctcagttgatatgaacaatacataat-atatgcaaggtccggggtt 24195303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 30218214 - 30218279
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||||||||||||||||||||| |||||||| ||| || |||| ||||||| | ||||||||||    
T  30218214 tcagttgatatgaacaatgcataat-atatgcaatgtccggagtttaaaccccgacaaccaccaaaa 30218279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 1765005 - 1764953
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc 186  Q
    |||||||||||||||||| |||||| |||||||||| || |||||| |||||||    
T  1765005 ctcagttgatatgaacaacgcataa-aatatgcaagatccggggttcgaacccc 1764953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 12748913 - 12748977
Alignment:
Q  135 cagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||| |||| |||||||||||| |||||||||||| ||||||  |||||| |||||||||||||    
T  12748913 cagttggtatggacaatgcataat-atatgcaaggtccggggttcaaaccccggccaccaccaaaa 12748977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 23852920 - 23852992
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||||| | |||| ||||||||||||| ||||||||||| | |||||||| |||| |||||||||||| ||||    
T  23852920 gctcagtcggtatggacaatgcataata-tatgcaaggtccgtggtttgaatcccgcccaccaccaaaaaaaaa 23852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 39525381 - 39525442
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||| |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||||    
T  39525381 agtttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccg 39525442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 12800950 - 12800883
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaaga 201  Q
    ||||||| |||| ||||| ||||||| ||||||||||| ||||||  ||||||| ||||||||||||||    
T  12800950 tcagttggtatggacaatacataata-tatgcaaggtccggggttcaaaccccgaccaccaccaaaaga 12800883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 13577086 - 13577157
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    |||||||| |||| |||||||||||| |||||||||||| || | |||||||||| ||||||| |||| ||||    
T  13577086 ctcagttggtatggacaatgcataatcatatgcaaggtctggag-ttgaaccccgaccaccacaaaaaaaaaa 13577157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 20665740 - 20665704
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  20665740 tcatgagtttagctcagttgataggaacaatgcataa 20665704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 36059414 - 36059346
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||||  ||||||||| |  ||||||||||||| ||||| ||||||| | |||||||||||    
T  36059414 gctcagttgatatagacaatgcatcaatatatgcaaggtcgagggttcgaaccccggacaccaccaaaa 36059346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 38139247 - 38139315
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  38139247 gctcagttgatatagacaatgtataaatatatgcaaggtcgtgggttcgaaccccggacaccaccaaaa 38139315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 44068045 - 44068005
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcg 172  Q
    ||||||||||| || ||||||||||| ||||||||||||||    
T  44068045 gctcagttgatgtggacaatgcataaaaatatgcaaggtcg 44068005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 44087250 - 44087290
Alignment:
Q  135 cagttgatatgaacaatgcataataatatgcaaggtcgggg 175  Q
    |||||| |||| ||||||||||| |||||||||||||||||    
T  44087250 cagttggtatgtacaatgcataaaaatatgcaaggtcgggg 44087290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 1468 - 1399
Alignment:
Q  135 cagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    |||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||||    
T  1468 cagttggtatggacaatgcataataatatgcaacgtctggggttcgaaccccgccaccaccaaaaaaaaa 1399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 19595542 - 19595476
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||||  |||||||| ||||||| |||||||||||||||||||||| |||||| ||||||||    
T  19595542 tcatgagtttaactcagttggtatgaaccatgcataataatatgcaaggtctggggttcgaaccccg 19595476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 19976154 - 19976235
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| |||| ||||    
T  19976154 tgagtttagctcagttggtatggacaatgcataataatatgcaaggtccggggttcgaacctcgaccaccacaaaaaaaaaa 19976235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 16221409 - 16221331
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaa 199  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||  |||||| ||| |||||||||||| ||||    
T  16221409 tcatgagtttagctcagttggtatgaacaatgcataa-aatatgcaaggttcggggttcgaatccccgccaccacaaaaa 16221331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 25186302 - 25186222
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||| ||||||  |||||| |||||||| |||| ||||    
T  25186302 tgagtttagctcagttgatatggacaatgcataat-atatgcaaggtccggggttcaaaccccagccaccacaaaaaaaaaa 25186222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 21870944 - 21870872
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaatat 207  Q
    ||||| |||| ||||||||||||||||||||||||  |||||| |||||||| ||||||| |||| |||||||    
T  21870944 agttggtatggacaatgcataataatatgcaaggttcggggttcgaaccccgaccaccacaaaaaaaaaatat 21870872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 35287724 - 35287639
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaac-cccgccaccaccaaaagaaaatatat 209  Q
    |||||||||||||||||||| | |||||||||||| | |||||||||| ||||||| ||| |  |||||||| |||| |||||||||    
T  35287724 tgagtttggctcagttgatagggacaatgcataat-agatgcaaggtccggggtttaaactctggccaccacaaaaaaaaaatatat 35287639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 2256981 - 2257053
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaat 205  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||| |||||||| |||| |||||    
T  2256981 ctcagttggtatggacaatgcataata-tatgcaaggtctggggttcgaaccccggccaccacaaaaaaaaaat 2257053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 17281011 - 17280948
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    ||||||| || |||||||||||||||| |||| ||||| |||||||||||  |||||||||||||    
T  17281011 tcatgagcttagctcagttgatatgaataatgtataat-atatgcaaggtgcggggtttgaaccc 17280948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 21482579 - 21482504
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||| ||||||||| || | | |||| |||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  21482579 tgagtttagctcagttggtaaggataatgtataata-tatgcaaggtccggggtttgaaccccgaccaccaccaaaa 21482504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 27411101 - 27411168
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||||| ||  ||||||||| ||||||||||| |||||| ||||||| |||||||||||||    
T  27411101 gctcagttgatatggaccttgcataata-tatgcaaggtccggggttcgaaccccggccaccaccaaaa 27411168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 33063995 - 33064062
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaac-cccgccaccaccaaaa 199  Q
    |||||||||||||| |||||||||||| |||||||||||| || ||| |||| || |||||||||||||    
T  33063995 gctcagttgatatggacaatgcataat-atatgcaaggtccggagttcgaactccggccaccaccaaaa 33064062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 13143131 - 13143169
Alignment:
Q  146 aacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  13143131 aacaatgcataata-tatgcaaggtcgggggtttgaaccc 13143169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 29734692 - 29734738
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  29734692 tgagtttagctcagttgatatggacaatgcataat-atatgcaaggtc 29734738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 39761439 - 39761500
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||| |||||||||||| | |||||||||||| ||||||||||||  ||||||||||||||    
T  39761439 tgagtttagctcagttgataaggacaatgcataat-atatgcaaggtc-tgggtttgaaccccg 39761500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 42066721 - 42066787
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc-ccgccaccaccaaa 198  Q
    ||||||||| |||| |||||||| |||| ||||||||||| |||||||||||| | ||||||||||||    
T  42066721 gctcagttggtatggacaatgcacaata-tatgcaaggtccggggtttgaacctcggccaccaccaaa 42066787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 7052782 - 7052856
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaat 205  Q
    ||||||||| || | ||||||||||||||||||||||||| |||| |  |||||| | ||||||||||| |||||    
T  7052782 gctcagttggtaaggacaatgcataataatatgcaaggtccggggctcaaaccccggacaccaccaaaaaaaaat 7052856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 16439346 - 16439424
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||| || ||||||||| |||  ||| || |||||||||| |||||||| || || ||||||||||||||| ||||    
T  16439346 tcatgagcttagctcagttggtatagacagtgtataataatattcaaggtcgtggattcgaaccccgccaccacaaaaa 16439424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 25626018 - 25626087
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccac 191  Q
    |||||||||| ||| |||| ||||| ||| ||||||||| |||||||| ||| ||||| ||||||||||||    
T  25626018 tcatgagtttagcttagtttatatggacattgcataata-tatgcaagctcgagggttcgaaccccgccac 25626087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 29133542 - 29133469
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||| ||||||||| |||||||||||||||| |||||||||| ||  ||||| |||||||| ||||||| ||||    
T  29133542 agtttagctcagttggtatgaacaatgcataa-aatatgcaagatctagggttcgaaccccgaccaccacaaaaa 29133469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 39068760 - 39068707
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc 186  Q
    |||||||||||| | |||||||||||| ||||||||| || ||||||||||||||    
T  39068760 gctcagttgataaggacaatgcataat-atatgcaagatccggggtttgaacccc 39068707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 5676763 - 5676819
Alignment:
Q  147 acaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||||||| |||||||||  |||||||  ||||||||||||||||||| ||||    
T  5676763 acaatgcataata-tatgcaagggtgggggttcaaaccccgccaccaccaaaaaaaaa 5676819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 9383261 - 9383189
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||| |||||||||||| |||||||||||  ||||||| |||||| |||||||| |||| ||||    
T  9383261 gctcagttggtatggacaatgcataat-atatgcaaggtttggggtttcaacccctgccaccacaaaaaaaaaa 9383189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 19159951 - 19159987
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    |||||||||||||||||||||||||| |||||||||||    
T  19159951 ctcagttgatatgaacaatgcataat-atatgcaaggt 19159987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 37119318 - 37119274
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaagg 169  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||    
T  37119318 tgagtttaactcagttgatatgaacaatgcataat-atatgcaagg 37119274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 41778996 - 41778924
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaagaaaa 204  Q
    ||||||||||| || |||||||||||| |||||||||||| | |||| ||| ||| ||||||||||||| ||||    
T  41778996 gctcagttgatttggacaatgcataat-atatgcaaggtccgaggttcgaatcccggccaccaccaaaaaaaaa 41778924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 3708377 - 3708413
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  3708377 tcatgagtttagctcagttgataggaacaatgcataa 3708413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 6765619 - 6765686
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||| |||||| |||||| |||||| ||||| || ||||||||||||    
T  6765619 gctcagttggtatggacaatgcataa-aatatgtaaggtccggggttcgaaccacgaccaccaccaaaa 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 9547460 - 9547397
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccacca 196  Q
    ||||||||||||| |||||||||||| |||||||||||  ||||||  ||||||| |||||||||    
T  9547460 ctcagttgatatggacaatgcataat-atatgcaaggtttggggttcaaaccccgaccaccacca 9547397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 11869039 - 11869003
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  11869039 tcatgagtttagctcagttgataggaacaatgcataa 11869003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 12124546 - 12124605
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc 184  Q
    ||||||| ||||||||| || | |||||||||||| |||||||||||| |||||| |||||    
T  12124546 tgagtttagctcagttggtaaggacaatgcataat-atatgcaaggtccggggttcgaacc 12124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 24592898 - 24592831
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| || | ||||||||||||| ||||||||||| ||||||  |||||| |||||||||||||    
T  24592898 gctcagttggtagggacaatgcataata-tatgcaaggtctggggttcaaaccccggccaccaccaaaa 24592831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 35360432 - 35360396
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  35360432 tcatgagtttagctcagttgataggaacaatgcataa 35360396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 14907087 - 14907021
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  14907087 ctcaattggtatgaacaatgtataataatatgtaaggtcgggggttcgaaccccaccaccaccaaaa 14907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 5553052 - 5552977
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaatatat 209  Q
    |||||||||||||||||||| |||||| |||| |||||||||  || ||||||||||||||| |||| |||||||||    
T  5553052 ctcagttgatatgaacaatgtataata-tatgtaaggtcgggaattcgaaccccgccaccacaaaaaaaaaatatat 5552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 24752700 - 24752636
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccacc 195  Q
    ||||||||| |||| ||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  24752700 gctcagttggtatggacaatgcataataatatgcaaggtctggggttcgaaccccggccaccacc 24752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 7158774 - 7158849
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||| || ||||||||||| ||||||||||| ||||||||||||| || |||||| ||||| ||||||||||||    
T  7158774 tgagtttagcccagttgatatggacaatgcataa-aatatgcaaggtccggagtttgagccccgaccaccaccaaaa 7158849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 42888584 - 42888651
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||    
T  42888584 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcgaacccccgccaccaccaaaa 42888651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 45774584 - 45774651
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||| ||| |||||| ||||||||||||||||||| |||||| ||||||| |||||||| ||||    
T  45774584 ctcagttggtataaacaatacataataatatgcaaggtccggggttcgaaccccagccaccacaaaaa 45774651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 3393628 - 3393583
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3393628 tgagtttagctcagttgatatgaacaatgcataat-atatgcaaggt 3393583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 20006080 - 20006134
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||| ||| |||||||||||||||||||| |||  |||||||||||||||    
T  20006080 ctcagttgacatggacaatgcataataatatgcagggttcggggtttgaaccccg 20006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 52441563 - 52441491
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||  ||||||||||||| ||||||||||| || ||||||||||| ||||||||| ||||||||    
T  52441563 gctcagttggtatagacaatgcataata-tatgcaaggtccggcgtttgaaccccggccaccacccaaagaaaa 52441491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 2684466 - 2684422
Alignment:
Q  155 taataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  2684466 taataatatgcaaggtcggaggttcgaaccccgccaccacaaaaa 2684422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 34521250 - 34521175
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc-ccgccaccaccaaaa 199  Q
    ||||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||  |||| | |||||||||||||    
T  34521250 tgagtttagctcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaacctcggccaccaccaaaa 34521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 39452469 - 39452537
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||| ||  |||||| |||||||| ||||    
T  39452469 gctcagttggtatgaacaatgcataaaaatatgcaaggtctgggattcaaaccccggccaccacaaaaa 39452537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 925477 - 925434
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggt 177  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||    
T  925477 tcagttgatatggacaatgcataaaaatatgcaaggtccggggt 925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 15549289 - 15549250
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  15549289 gctcagttgatatagacaatgcataataatatgcaaggtc 15549250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 21965944 - 21965889
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||||||||||| |||||||||  |||| ||||||| |||||| ||||||||    
T  21965944 gctcagttgatatgaataatgcataaatatatacaaggtccggggttcgaaccccg 21965889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 28053291 - 28053236
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgcc 189  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||| |||| |||||    
T  28053291 tcagttggtatggacaatgcataataatatgtaaggtcgagggttcgaactccgcc 28053236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 7550906 - 7550959
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||| || ||||||||    
T  7550906 ctcagttgatatgaacaatgcataa-aatatacaaggtccgggattcgaaccccg 7550959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 29234034 - 29233973
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc 186  Q
    ||||||| ||||||||| |||  ||||||||||| ||||||||||||| |||||| |||||||    
T  29234034 tgagtttagctcagttggtatagacaatgcataa-aatatgcaaggtctggggttcgaacccc 29233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 39879284 - 39879210
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  39879284 agtttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccagacaccaccaaaa 39879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 44641528 - 44641581
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||| | ||||||    
T  44641528 tgagtttagctcagttgatatggacaatgcataat-atatgcaaggcccggggtt 44641581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 45701322 - 45701375
Alignment:
Q  117 gttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    |||||| ||||||| ||||||||| |||||||||||||||| |||||| ||||||    
T  45701322 gttttcgtgagtttagctcagttggtatgaacaatgcataa-aatatgtaaggtc 45701375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 2884499 - 2884427
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaata 206  Q
    ||||||||||||| |||||||||||| |||| |||| |||||||||  ||| ||| |||||| |||| ||||||    
T  2884499 ctcagttgatatggacaatgcataat-atatacaagatcgggggttcaaactccgtcaccacaaaaaaaaaata 2884427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 3509993 - 3509921
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggt-cgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||||  ||| | ||||||||||||| ||||    
T  3509993 gctcagttggtatggacaatgcataat-atatgcaaggtccgggggttcaaactcggccaccaccaaaaaaaaa 3509921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 25942716 - 25942679
Alignment:
Q  120 ttcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  25942716 ttcatgagtttggcacagttggtatgaacaatgcataa 25942679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 29451033 - 29450996
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  29451033 ctcagttggtatggacaatgcataataatatgcaaggt 29450996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 32944749 - 32944817
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||| |||| |||||||||||| |||||||| ||| |||||| |||||||| |||||||||||| ||||    
T  32944749 agttggtatggacaatgcataat-atatgcaacgtctggggttcgaaccccgaccaccaccaaaaaaaaa 32944817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 40227829 - 40227905
Alignment:
Q  123 atgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||| || ||||||||| |||| ||||||||||| ||||| ||||||| |||||| |||||||| ||||||| ||||    
T  40227829 atgagcttagctcagttggtatggacaatgcataa-aatatacaaggtctggggttcgaaccccgaccaccacaaaaa 40227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 42045424 - 42045352
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||| |||||||||||| |||||||||||| || |||  |||||| ||||||||||||| ||||    
T  42045424 gctcagttggtatggacaatgcataat-atatgcaaggtctggagttcaaaccccggccaccaccaaaaaaaaa 42045352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 48646777 - 48646732
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    |||||||  |||| ||||||||||||||||||||||||| ||||||    
T  48646777 ctcagtttgtatggacaatgcataataatatgcaaggtccggggtt 48646732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 2665345 - 2665301
Alignment:
Q  142 tatgaacaatgcataataatatgcaaggtcgggggtttgaacccc 186  Q
    |||| ||||||||||||||||||||||||| | |||| |||||||    
T  2665345 tatggacaatgcataataatatgcaaggtctgaggttcgaacccc 2665301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 13953925 - 13953874
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    |||| ||||||||||||||||||||| |||||||||||  || ||||||||||    
T  13953925 ctcaattgatatgaacaatgcataat-atatgcaaggtttggtgtttgaaccc 13953874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 29251778 - 29251829
Alignment:
Q  147 acaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||||||| ||||||||||| | |||| |||||| |||||||||||||    
T  29251778 acaatgcataata-tatgcaaggtctgaggttcgaacccggccaccaccaaaa 29251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 32962573 - 32962644
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    |||||||| |||||||||||||||| |||||||||||||  |||||  ||||||| |||||||| ||| ||||    
T  32962573 ctcagttggtatgaacaatgcataa-aatatgcaaggtccagggttcaaaccccgaccaccacccaaaaaaaa 32962644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 50727305 - 50727337
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgca 166  Q
    ||||||| |||||||||||||||||||||||||    
T  50727305 tcagttggtatgaacaatgcataataatatgca 50727337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 12700471 - 12700406
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||| ||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||    
T  12700471 tcagttggtatgaacaatgcataat-atatgcaaggtctagggtttgaaccccggccaccaccaaaa 12700406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 34828307 - 34828370
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||| ||||||||| |||| |||||||||||||||||| |||||| | |||| ||||||||    
T  34828307 tgagtttagctcagttggtatggacaatgcataataatatgtaaggtctgaggttcgaaccccg 34828370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 9111058 - 9111110
Alignment:
Q  134 tcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||    
T  9111058 tcagttggtatgaacaatgcataat-atatgcaaggtccggggttcgaaccccg 9111110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 13496126 - 13496197
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    |||||||||||||||||||||||||| |||||||||||| || |||  ||||||| ||| |||||||| ||||    
T  13496126 ctcagttgatatgaacaatgcataat-atatgcaaggtccggagttcaaaccccgaccaacaccaaaaaaaaa 13496197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 2445309 - 2445374
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaa 198  Q
    |||||||||||||||||||||||||| |||| |||| |  |||||| |||||||| |||||||||||    
T  2445309 ctcagttgatatgaacaatgcataat-atatacaagattcggggttcgaaccccgaccaccaccaaa 2445374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 2726468 - 2726415
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||| ||||||||    
T  2726468 ctcagttggtatggacaatgcataata-tatgcaaggtccggggttcgaaccccg 2726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 6018718 - 6018644
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  6018718 agtttagctcagttgatatagacaatgtataaatatatgcaaggtcgtgggttcgaaccccggacaccaccaaaa 6018644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 24269892 - 24269960
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa--ccccgccaccaccaaaa 199  Q
    ||||||||  |||| ||||||||||| ||||||||||||  ||||||||||  |||||||||||||||||    
T  24269892 gctcagttagtatggacaatgcataa-aatatgcaaggttcggggtttgaatcccccgccaccaccaaaa 24269960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 28231485 - 28231432
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||||| ||||||    
T  28231485 tgagcttggctcagttgatagggacaatgcataat-atatgcaaggtccggggtt 28231432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 33975927 - 33975993
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||||| |||||||||||| |||||||||||||  |||||  | ||| |||||| ||||||||    
T  33975927 tcatgagtttagctcagttgataggaacaatgcataaatatatgtcaagtccggggttcgaaccccg 33975993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 655801 - 655729
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||  ||||||||||||| ||||||||||| |||||| ||||||| ||||| ||||||| ||||    
T  655801 gctcagttggtatcgacaatgcataata-tatgcaaggtccggggttcgaaccccggccactaccaaaaaaaaa 655729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 12904368 - 12904332
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12904368 ctcagttgatatgaacaatgcataat-atatgcaaggt 12904332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 24623377 - 24623297
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||||| |||||||||||||| |||||||||||| ||||| |||||  ||||||  ||||||| ||||||| |||| ||||    
T  24623377 tgagtttagctcagttgatatggacaatgcataat-atatgtaaggttcggggttcaaaccccgaccaccactaaaacaaaa 24623297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 247343 - 247379
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  247343 tcatgagtttagctcagttgataggaacaatgcataa 247379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 4494923 - 4494852
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| ||| || |||||| |||||||| |||| ||||    
T  4494923 gctcagttggtatggacaatgcataa-aatatgcgaggtctgggattcgaacccggccaccacaaaaaaaaaa 4494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 14036331 - 14036299
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatg 164  Q
    ||||||||| |||||||||||||||||||||||    
T  14036331 gctcagttggtatgaacaatgcataataatatg 14036299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 3936636 - 3936708
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||||| ||||||| |||||||| |||| ||||    
T  3936636 gctcagttggtatgaacaatgcataat-atatgcaaggtccggggttcgaaccccggccaccacaaaaaaaaaa 3936708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 56361865 - 56361798
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||||||||||||||||| ||||||| |||||||  ||||| ||||||| |||||||| ||||    
T  56361865 ctcagttgatatgaacaatgcatgataatatacaaggtctagggttcgaaccccggccaccacaaaaa 56361798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 35287559 - 35287487
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| |||| ||||    
T  35287559 gctcagttggtatgaacaatgcataa-aatatgcaaggtccggggttccaaccccggccaccacaaaaaaaaaa 35287487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 9946436 - 9946503
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||| ||||||||||||| ||||||  ||||||| ||||||||||||    
T  9946436 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaaccccgaccaccaccaaaa 9946503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 11949826 - 11949743
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||||| || ||||||||| |||| |||||||||||| |||||||||||| ||||||  ||||||| ||||||| |||| ||||    
T  11949826 tcatgagcttagctcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaaccccgaccaccacaaaaaaaaaa 11949743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 28435308 - 28435233
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||| ||||||||| |||| |||||||||||| |||||||||||  ||||||  |||||| |||||||||||||    
T  28435308 tgagtttagctcagttggtatggacaatgcataat-atatgcaaggttcggggttcaaaccccagccaccaccaaaa 28435233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 11144716 - 11144650
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||   ||||||||||||| ||||||||||| |||||||||||||| | |||||||||||    
T  11144716 ctcagttgataaagacaatgcataata-tatgcaaggtctggggtttgaaccccggacaccaccaaaa 11144650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 19479529 - 19479475
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||  |||||||    
T  19479529 gctcagttaatatgaacaatgcataat-atatgcaaggtccggggttcaaaccccg 19479475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 40849663 - 40849718
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||||||| || |||| ||||  ||||||||||||| ||||||||||||||    
T  40849663 gctcagttgatataaataatgtataaatatatgcaaggtcgcgggtttgaaccccg 40849718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 18138265 - 18138339
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||||||||   ||||||||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  18138265 agtttagctcagttgatatagtcaatgcataaatatatgcaaggtcgcgggttcgaaccccggacaccaccaaaa 18138339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 34033343 - 34033396
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||||| |||| |||||||| ||||||||||||| || ||||||||||||    
T  34033343 ctcagttgataagaaccatgcataa-aatatgcaaggtccggagtttgaaccccg 34033396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 49125474 - 49125548
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||||||||   ||||||||||  ||||||||||||| ||||| ||||||| | |||||||||||    
T  49125474 agtttagctcagttgatatagtcaatgcataaatatatgcaaggtcgcgggttcgaaccccggacaccaccaaaa 49125548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 19935221 - 19935169
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggt 177  Q
    ||||||| |||||||||||| ||||||||||||||  |||||||||||| ||||    
T  19935221 tgagtttagctcagttgataagaacaatgcataat-ctatgcaaggtcgagggt 19935169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 170
Target Start/End: Original strand, 22040652 - 22040696
Alignment:
Q  125 gagtttggctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||    
T  22040652 gagtttagctcagttgatatggacaatgcataat-atatgcaaggt 22040696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 24675138 - 24675086
Alignment:
Q  115 aagttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaag 168  Q
    ||||| || |||||||| |||||||| ||||||||||||||||| |||||||||    
T  24675138 aagttctcgtgagtttgtctcagttgctatgaacaatgcataat-atatgcaag 24675086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 8020699 - 8020629
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| | || ||||||||||||| |||||||||||| || || |||||| ||||||||||||| ||||    
T  8020699 gctcagttggtttggacaatgcataata-tatgcaaggtcgagg-ttcgaacccggccaccaccaaaaaaaaa 8020629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 10262146 - 10262110
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  10262146 tcatgagtttagctcagttgataggaacaatgcataa 10262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 12698606 - 12698677
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||||| || |||||||||||| |||||||||||| |||||| ||| |  |||||||| |||| ||||    
T  12698606 gctcagttgatttggacaatgcataat-atatgcaaggtctggggttcgaatctggccaccacaaaaaaaaaa 12698677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 19587837 - 19587873
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  19587837 tcatgagtttagctcagttgataggaacaatgcataa 19587873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 20403229 - 20403182
Alignment:
Q  123 atgagtttggctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    ||||| || |||||||||||| |||||||||||||| ||||||||||||    
T  20403229 atgagcttagctcagttgataggaacaatgcataat-atatgcaaggtc 20403182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 21562309 - 21562345
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  21562309 tcatgagtttagctcagttgataggaacaatgcataa 21562345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 24080217 - 24080181
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  24080217 tcatgagtttagctcagttgataggaacaatgcataa 24080181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 24665043 - 24664976
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||||||| |||| | ||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||    
T  24665043 gctcagttggtatggagaatgcataata-tatgcaaggtccggggttcgaaccccgaccaccacaaaaa 24664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 26097790 - 26097722
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    |||||||||||||  |||||| ||||  ||||||||||||| ||||| ||||||||  |||||||||||    
T  26097790 gctcagttgatatatacaatgtataaatatatgcaaggtcgcgggttcgaaccccgaacaccaccaaaa 26097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29099762 - 29099694
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaa 199  Q
    |||||||||||||  |||||||||||  ||||||||||||| ||||| ||| ||| | |||||||||||    
T  29099762 gctcagttgatatagacaatgcataaatatatgcaaggtcgcgggttcgaatcccagacaccaccaaaa 29099694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 38453274 - 38453341
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||  ||| |||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||    
T  38453274 gctcagttggcatggacaatgcataat-atatgcaaggtccagggttcgaaccccagccaccaccaaaa 38453341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 43329830 - 43329866
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  43329830 tcatgagtttagctcagttgataggaacaatgcataa 43329866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 52620573 - 52620641
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaac-cccgccaccaccaaaa 199  Q
    |||||||||||||  |||||||||||  ||||||||||||| ||||| |||| || | |||||||||||    
T  52620573 gctcagttgatatagacaatgcataaatatatgcaaggtcgcgggttcgaactccggacaccaccaaaa 52620641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 54857667 - 54857600
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||| |||| ||| |||||||||||| ||||||||||||| ||||||  |||||| |||||||||||||    
T  54857667 gctcggttggtataaacaatgcataa-aatatgcaaggtccggggttcaaaccccggccaccaccaaaa 54857600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 1537 - 1604
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||    
T  1537 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcgaacccccgccaccaccaaaa 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 25385052 - 25385127
Alignment:
Q  123 atgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||  |||| ||| |||||||||||||||| ||||||||||||   |||||||||||| |||||||||||||    
T  25385052 atgagtttaactcaattggtatgaacaatgcataa-aatatgcaaggttcagggtttgaacccagccaccaccaaaa 25385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 16166428 - 16166373
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||||||||  |||||||||||  ||||||||||||| ||||||||||||||    
T  16166428 gctcagttgatatagacaatgcataaatatatgcaaggtcgcgggtttgaaccccg 16166373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 26655458 - 26655540
Alignment:
Q  117 gttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||||| |  ||||||||| |||| |||||||||||| ||||| |||||| |||||| ||||||| |||||||||||||    
T  26655458 gttttcatgagctcagctcagttggtatggacaatgcataat-atatgtaaggtccggggttcgaaccccggccaccaccaaaa 26655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 26927043 - 26927125
Alignment:
Q  117 gttttcatgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||||| |  ||||||||| |||| |||||||||||| ||||| |||||| |||||| ||||||| |||||||||||||    
T  26927043 gttttcatgagctcagctcagttggtatggacaatgcataat-atatgtaaggtccggggttcgaaccccggccaccaccaaaa 26927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 31561395 - 31561329
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    |||||||| |||| |||||||||||||||||||||||||  |||||||||||||| |||| |||||||    
T  31561395 ctcagttggtatggacaatgcataataatatgcaaggtc-cgggtttgaaccccgaccactaccaaaa 31561329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 18589918 - 18589853
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||| |||||   |||||||||||    
T  18589918 ctcagttggtatgaacaatgcataat-atatgcaaggtccggggtttaaacccgatcaccaccaaaa 18589853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 5150134 - 5150065
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaaga 201  Q
    |||||||  |||| |||||||||||||||||| |||||| |||||| |||||||| | ||||||||||||    
T  5150134 ctcagttagtatggacaatgcataataatatgtaaggtctggggttcgaaccccgacaaccaccaaaaga 5150065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 6624785 - 6624852
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||  ||| ||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||    
T  6624785 gctcagttggcatggacaatgcataata-tatgcaaggtccggggttcgaaccccggccaccaccaaaa 6624852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 31708198 - 31708147
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc 184  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||||| |||||    
T  31708198 gctcagttggtatgaacaatgcataat-atatgcaaggtctggggttcgaacc 31708147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 5614775 - 5614845
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||  |||||| ||||||| |||| ||||    
T  5614775 ctcagttgatatggataatgcataata-tatgtaaggtcgggggttcaaaccccaccaccacaaaaaaaaaa 5614845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 18489136 - 18489074
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||| ||||||||| |||  ||||||||||||| ||||||||||| || ||||||||||||    
T  18489136 tgagtttagctcagttggtatagacaatgcataata-tatgcaaggtctggagtttgaaccccg 18489074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 27479682 - 27479631
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc 184  Q
    ||||||||||| | |||||| |||||||||||||||||| |||||| |||||    
T  27479682 ctcagttgataagtacaatgtataataatatgcaaggtctggggttcgaacc 27479631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 37146999 - 37147053
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||||||| ||||||| ||||  ||||||||||||| ||||| ||||||||    
T  37146999 ctcagttgatataaacaatgtataaatatatgcaaggtcgcgggttcgaaccccg 37147053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 12190005 - 12190073
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaat 205  Q
    ||||| |||| ||||| ||||||| |||| |||||||||||||  |||||||||||||| |||| |||||    
T  12190005 agttggtatggacaatacataata-tatgtaaggtcgggggttcaaaccccgccaccacaaaaaaaaaat 12190073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 22522853 - 22522781
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    |||| |||| |||| ||||||||||||| ||||||||||| ||||||  |||||| ||||||||||||| ||||    
T  22522853 gctcggttggtatggacaatgcataata-tatgcaaggtccggggttcaaaccccggccaccaccaaaaaaaaa 22522781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26409262 - 26409318
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgcc 189  Q
    ||||||||| |||| |||||||||||| ||||| |||||| |||||| ||||||||||    
T  26409262 gctcagttggtatggacaatgcataat-atatgtaaggtccggggttcgaaccccgcc 26409318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 34436860 - 34436932
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgcc-accaccaaaagaaaa 204  Q
    ||||||||| || | ||||||||||||| ||||||||| | ||||||  ||||||||| |||||||||||||||    
T  34436860 gctcagttggtagggacaatgcataata-tatgcaagggccggggttcaaaccccgcccaccaccaaaagaaaa 34436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 37932339 - 37932391
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccc 185  Q
    ||||||||| |||| |||||||||||| |||||||||||| |||||| ||||||    
T  37932339 gctcagttggtatggacaatgcataat-atatgcaaggtccggggttcgaaccc 37932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 2530019 - 2530087
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    |||||||||||||  |||||||||||  |||||||||||||  |||| ||||||| | |||||||||||    
T  2530019 gctcagttgatatagacaatgcataaatatatgcaaggtcgcaggttcgaaccccggacaccaccaaaa 2530087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 6489016 - 6489083
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| || | |||||||||||| |||||||||||| ||||||  |||||| |||||||||||||    
T  6489016 gctcagttggtagggacaatgcataat-atatgcaaggtctggggttcaaaccccggccaccaccaaaa 6489083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 13796340 - 13796383
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggt 177  Q
    |||||| ||||||||||||||||||| |||||||||||| |||||    
T  13796340 ctcagtcgatatgaacaatgcataat-atatgcaaggtctggggt 13796383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 13864354 - 13864425
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    |||||||| |||||||||| ||||||| ||||||||||| ||||||  ||||||| ||||||| |||| ||||    
T  13864354 ctcagttggtatgaacaatacataata-tatgcaaggtccggggttcaaaccccgaccaccacaaaaaaaaaa 13864425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 32339757 - 32339816
Alignment:
Q  145 gaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaagaaaa 204  Q
    ||||||||||||||| ||||||||||| |||||| ||| ||| ||||||||||||| ||||    
T  32339757 gaacaatgcataata-tatgcaaggtccggggttcgaatcccggccaccaccaaaaaaaaa 32339816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 37461795 - 37461831
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  37461795 tcatgagtttagctcagttgataggaacaatgcataa 37461831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 40716001 - 40715934
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||| |||||||| |||||||||||| |||||||||||| ||||||  |||||| |||||||| ||||    
T  40716001 gctcaattgatatggacaatgcataat-atatgcaaggtccggggttcaaaccccggccaccacaaaaa 40715934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 21506810 - 21506740
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||| | ||||||||| ||||    
T  21506810 gctcagttggtatggacaatgcataa-aatatgcaaggtctggggtttgaaccccggc-ccaccaaaaaaaaa 21506740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 44582733 - 44582801
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| ||||  |||||||||||||||||||||||| |||||| ||||||| |||||||| ||||    
T  44582733 gctcagttggtatgggcaatgcataataatatgcaaggtccggggttcgaaccccggccaccacaaaaa 44582801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 28244155 - 28244102
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||| ||||||||    
T  28244155 ctcagttggtatgaacaatgcataa-aatatgcaaggtccggggttcgaaccccg 28244102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 52904195 - 52904130
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaa 198  Q
    ||||||||| || | ||||||||||||| ||||||| ||||||||||  ||||||||||||||||||    
T  52904195 gctcagttggtaaggacaatgcataata-tatgcaatgtcgggggttcaaaccccgccaccaccaaa 52904130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 20370333 - 20370261
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaat 205  Q
    |||||||||||||| ||||||||||| ||||||||||||   ||||| |||||| |||||||| |||| |||||    
T  20370333 gctcagttgatatggacaatgcataa-aatatgcaaggtttagggttcgaacccagccaccacaaaaaaaaaat 20370261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 47313424 - 47313351
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacc-ccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| ||||||||||||||||||||||||  ||| |||||||| | |||||||| |||| ||||    
T  47313424 gctcagttggtatggacaatgcataataatatgcaaggttcgggatttgaacctcggccaccacaaaaaaaaaa 47313351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 52575956 - 52576028
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaagaaaa 204  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||| ||| |||| |||||||| ||| ||||    
T  52575956 gctcagttggtatgaacaatgcataa-aatatgcaaggtctggggttcgaatcccgaccaccaccgaaaaaaaa 52576028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 25340976 - 25340909
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaa 199  Q
    ||||||||| |||| ||||||||||| ||||||||||||| ||||||  |||||| |||||||||||||    
T  25340976 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcaaaccccggccaccaccaaaa 25340909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 38131010 - 38130939
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    |||||||| |||| |||||||||||| |||||||||||| ||||||  |||||| ||||||||||||| ||||    
T  38131010 ctcagttggtatggacaatgcataat-atatgcaaggtccggggttcaaaccccggccaccaccaaaaaaaaa 38130939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 21160062 - 21160132
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaagaaaa 204  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||  |||||| ||||||| |||| ||||    
T  21160062 ctcagttgatatggataatgcataata-tatgtaaggtcgggggttcaaaccccaccaccacaaaaaaaaaa 21160132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 25441552 - 25441478
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaata 206  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||  |||||| |||||||| |||| ||||||    
T  25441552 gctcagttggtatggacaatgcataat-atatgcaaggtctggggttcaaaccccggccaccacaaaaaaaaaata 25441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 44579645 - 44579699
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||| |||| ||||||||||| ||||||||||||| |||||| ||||||||    
T  44579645 gctcagttggtatggacaatgcataa-aatatgcaaggtccggggttcgaaccccg 44579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 51505873 - 51505919
Alignment:
Q  123 atgagtttggctcagttgatatgaacaatgcataataatatgcaaggt 170  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  51505873 atgagtttagctcagttgatatggacaatgcataa-aatatgcaaggt 51505919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 38894046 - 38894091
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||    
T  38894046 gctcagttgatatgaacaatgtataa-aatatgcaaggtccggggtt 38894091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 14827534 - 14827606
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaacccc-gccaccaccaaaagaaaa 204  Q
    ||||||||| |||| ||||||||||| |||||||||| || ||||||| |||||| |||||||| |||| ||||    
T  14827534 gctcagttggtatggacaatgcataa-aatatgcaagatccggggtttaaaccccggccaccacaaaaaaaaaa 14827606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 25874140 - 25874185
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    |||||||| |||| |||||||||||||||||| |||||| ||||||    
T  25874140 ctcagttggtatggacaatgcataataatatgtaaggtccggggtt 25874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 53996308 - 53996380
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaagaaaa 204  Q
    ||||||||| |||| |||||||||||| |||||||||||| |||||| ||| ||| |||||||| |||| ||||    
T  53996308 gctcagttggtatggacaatgcataat-atatgcaaggtctggggttcgaatcccggccaccacaaaaaaaaaa 53996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 916201 - 916237
Alignment:
Q  121 tcatgagtttggctcagttgatatgaacaatgcataa 157  Q
    |||||||||| |||||||||||| |||||||||||||    
T  916201 tcatgagtttagctcagttgataggaacaatgcataa 916237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 5030206 - 5030246
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatg 164  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  5030206 tgagtttagttcagttggtatgaacaatgcataataatatg 5030246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 25505738 - 25505687
Alignment:
Q  147 acaatgcataataatatgcaaggtcgggggtttgaaccccgccaccaccaaaa 199  Q
    ||||||||||||| ||||||||||| |||||| |||||| | |||||||||||    
T  25505738 acaatgcataata-tatgcaaggtctggggttcgaacccggacaccaccaaaa 25505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 40493005 - 40493045
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatg 164  Q
    |||||||| |||||||| |||| ||||||||||||||||||    
T  40493005 tgagtttgactcagttggtatggacaatgcataataatatg 40493045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 40862180 - 40862220
Alignment:
Q  132 gctcagttgatatgaacaatgcataataatatgcaaggtcg 172  Q
    ||||||||| ||||||||||| ||||||||||| |||||||    
T  40862180 gctcagttgttatgaacaatgtataataatatgtaaggtcg 40862220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 54230160 - 54230097
Alignment:
Q  123 atgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    |||||||| ||||||||| || | |||||||||||| |||||||||||  |||||| ||||||||    
T  54230160 atgagtttagctcagttggtaaggacaatgcataat-atatgcaaggtttggggttcgaaccccg 54230097  T

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Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 6980 - 7062
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaagaaaat 205  Q
    |||||||| ||| |||| |||| |||||||||||||||||| |||||| |||||| ||| ||| |||||||| |||| |||||    
T  6980 tgagtttgactcggttggtatggacaatgcataataatatgtaaggtctggggttcgaatcccggccaccacaaaaaaaaaat 7062  T

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Target: scaffold0259 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 5416 - 5489
Alignment:
Q  126 agtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtttgaaccccg-ccaccaccaaaa 199  Q
    ||||| |||| |||| |||| ||||||||||| ||||||||||||| |||||| || ||||| ||||||||||||    
T  5416 agtttagctcggttggtatggacaatgcataa-aatatgcaaggtctggggttcgatccccgaccaccaccaaaa 5489  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 31982 - 31929
Alignment:
Q  124 tgagtttggctcagttgatatgaacaatgcataataatatgcaaggtcgggggtt 178  Q
    |||| ||||||||||||||| | |||||||||||| |||||||||||| ||||||    
T  31982 tgagcttggctcagttgatagggacaatgcataat-atatgcaaggtccggggtt 31929  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 189642 - 189604
Alignment:
Q  133 ctcagttgatatgaacaatgcataataatatgcaaggtc 171  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  189642 ctcagttggtatggacaatgcataataatatgcaaggtc 189604  T

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Target: scaffold0393 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 14853 - 14814
Alignment:
Q  147 acaatgcataataatatgcaaggtcgggggtttgaaccccg 187  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  14853 acaatgcataa-aatatgcaaggtccggggtttgaaccccg 14814  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 37548 - 37611
Alignment:
Q  136 agttgatatgaacaatgcataataatatgcaaggtcgggggtttgaa-ccccgccaccaccaaaa 199  Q
    ||||| |||||||||||||||| ||||||||||||| |||||| ||| ||| ||||||| |||||    
T  37548 agttggtatgaacaatgcataa-aatatgcaaggtccggggttcgaatcccggccaccatcaaaa 37611  T

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