View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7577_1D_low_17 (Length: 313)

Name: NF7577_1D_low_17
Description: NF7577_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7577_1D_low_17
NF7577_1D_low_17
[»] chr3 (27 HSPs)
chr3 (18-214)||(34897743-34897940)
chr3 (192-313)||(1995452-1995573)
chr3 (203-277)||(52859272-52859346)
chr3 (209-313)||(19830394-19830498)
chr3 (209-313)||(27033659-27033763)
chr3 (209-313)||(43719910-43720014)
chr3 (210-313)||(44637950-44638052)
chr3 (207-297)||(10474400-10474489)
chr3 (248-313)||(2229991-2230056)
chr3 (209-305)||(24754673-24754769)
chr3 (209-305)||(24763670-24763766)
chr3 (209-313)||(29586344-29586447)
chr3 (244-294)||(33632849-33632899)
chr3 (243-313)||(54911662-54911732)
chr3 (248-313)||(34373839-34373904)
chr3 (202-313)||(48084827-48084939)
chr3 (209-297)||(51982549-51982636)
chr3 (254-313)||(34373593-34373652)
chr3 (207-276)||(30235416-30235484)
chr3 (244-313)||(31523666-31523735)
chr3 (209-313)||(40851782-40851886)
chr3 (214-302)||(47750274-47750361)
chr3 (252-311)||(25285843-25285902)
chr3 (248-298)||(46167416-46167466)
chr3 (244-305)||(550814-550875)
chr3 (244-313)||(42613088-42613157)
chr3 (244-313)||(49679268-49679337)
[»] chr6 (22 HSPs)
chr6 (201-313)||(7215807-7215919)
chr6 (201-312)||(2800566-2800677)
chr6 (200-313)||(4804456-4804569)
chr6 (209-313)||(7162092-7162196)
chr6 (209-313)||(21159332-21159436)
chr6 (209-304)||(17828532-17828626)
chr6 (251-313)||(27826546-27826608)
chr6 (211-305)||(23936269-23936365)
chr6 (209-313)||(17944170-17944274)
chr6 (248-313)||(12412645-12412710)
chr6 (248-313)||(13089751-13089816)
chr6 (244-313)||(24484887-24484956)
chr6 (209-304)||(227526-227622)
chr6 (202-244)||(9952993-9953035)
chr6 (246-313)||(32254031-32254098)
chr6 (248-313)||(1249150-1249213)
chr6 (244-313)||(7545645-7545715)
chr6 (252-290)||(9954332-9954370)
chr6 (244-313)||(13888520-13888590)
chr6 (244-313)||(2142291-2142360)
chr6 (268-313)||(29698171-29698216)
chr6 (210-266)||(29229149-29229204)
[»] chr1 (24 HSPs)
chr1 (201-313)||(39426218-39426330)
chr1 (200-313)||(32887735-32887847)
chr1 (203-289)||(35534741-35534825)
chr1 (205-313)||(26860010-26860117)
chr1 (209-305)||(26372268-26372362)
chr1 (209-313)||(50294026-50294130)
chr1 (244-313)||(5047379-5047448)
chr1 (248-305)||(7840681-7840738)
chr1 (248-313)||(12151775-12151840)
chr1 (209-313)||(32618809-32618911)
chr1 (243-313)||(24977248-24977318)
chr1 (202-313)||(18976260-18976372)
chr1 (209-305)||(50484402-50484498)
chr1 (244-313)||(30077642-30077711)
chr1 (198-313)||(5854799-5854913)
chr1 (255-313)||(24413291-24413349)
chr1 (248-302)||(48327156-48327210)
chr1 (210-264)||(49384627-49384680)
chr1 (244-313)||(52280037-52280106)
chr1 (202-266)||(1228496-1228560)
chr1 (200-276)||(12380831-12380907)
chr1 (200-276)||(12384898-12384974)
chr1 (201-301)||(27982072-27982171)
chr1 (209-285)||(45978041-45978117)
[»] chr2 (26 HSPs)
chr2 (203-313)||(30709118-30709228)
chr2 (202-313)||(4446852-4446963)
chr2 (200-313)||(19908788-19908899)
chr2 (202-277)||(30217517-30217592)
chr2 (201-313)||(31618724-31618834)
chr2 (209-313)||(13238689-13238793)
chr2 (209-313)||(35316833-35316937)
chr2 (226-313)||(15709776-15709862)
chr2 (201-271)||(30721564-30721632)
chr2 (252-313)||(28564900-28564961)
chr2 (202-313)||(2063361-2063472)
chr2 (205-313)||(30857638-30857745)
chr2 (226-294)||(36929743-36929810)
chr2 (243-313)||(34512022-34512092)
chr2 (244-310)||(38397092-38397158)
chr2 (244-313)||(8988863-8988932)
chr2 (244-305)||(35315286-35315347)
chr2 (245-313)||(21454494-21454561)
chr2 (209-275)||(22061433-22061498)
chr2 (244-313)||(375001-375070)
chr2 (244-313)||(19905889-19905958)
chr2 (248-313)||(23259489-23259554)
chr2 (202-302)||(35315521-35315620)
chr2 (226-313)||(15722242-15722328)
chr2 (203-252)||(6946335-6946384)
chr2 (244-313)||(23459844-23459913)
[»] chr8 (17 HSPs)
chr8 (203-313)||(42761721-42761831)
chr8 (200-298)||(21360299-21360400)
chr8 (248-313)||(30426671-30426736)
chr8 (209-313)||(28069727-28069831)
chr8 (209-313)||(36991364-36991468)
chr8 (226-313)||(18689499-18689585)
chr8 (226-313)||(24557162-24557248)
chr8 (244-313)||(26749546-26749615)
chr8 (207-313)||(42338008-42338113)
chr8 (209-313)||(6014202-6014307)
chr8 (244-300)||(17520403-17520459)
chr8 (246-313)||(36748492-36748558)
chr8 (248-313)||(40695249-40695314)
chr8 (253-313)||(10672519-10672579)
chr8 (199-290)||(37966397-37966487)
chr8 (198-264)||(20169125-20169190)
chr8 (245-313)||(34612572-34612640)
[»] chr5 (25 HSPs)
chr5 (209-313)||(29341003-29341106)
chr5 (209-313)||(35660572-35660676)
chr5 (210-313)||(4895699-4895802)
chr5 (209-305)||(11775809-11775905)
chr5 (209-313)||(18625384-18625488)
chr5 (209-313)||(32129580-32129684)
chr5 (209-313)||(37266739-37266843)
chr5 (209-313)||(43309116-43309220)
chr5 (248-313)||(14349811-14349876)
chr5 (244-313)||(31653043-31653112)
chr5 (248-313)||(40753164-40753229)
chr5 (209-313)||(13032126-13032230)
chr5 (226-305)||(34827208-34827287)
chr5 (207-273)||(9460597-9460662)
chr5 (211-313)||(39902423-39902525)
chr5 (244-301)||(10362012-10362069)
chr5 (252-313)||(14688582-14688643)
chr5 (244-297)||(18653385-18653438)
chr5 (244-313)||(27428879-27428948)
chr5 (244-313)||(36290610-36290679)
chr5 (245-313)||(2984389-2984457)
chr5 (202-236)||(21213953-21213987)
chr5 (244-297)||(3057152-3057205)
chr5 (245-302)||(31279933-31279990)
chr5 (244-304)||(31546503-31546563)
[»] chr7 (31 HSPs)
chr7 (202-291)||(47270580-47270668)
chr7 (209-313)||(4888475-4888579)
chr7 (248-313)||(25084730-25084795)
chr7 (204-305)||(40023215-40023315)
chr7 (209-313)||(9559017-9559121)
chr7 (240-296)||(29844316-29844372)
chr7 (244-311)||(32915966-32916033)
chr7 (202-313)||(39855770-39855880)
chr7 (248-313)||(12139334-12139400)
chr7 (201-313)||(33450514-33450627)
chr7 (244-313)||(47799898-47799967)
chr7 (210-302)||(989148-989239)
chr7 (209-305)||(7712331-7712426)
chr7 (202-313)||(7373875-7373985)
chr7 (213-313)||(7362576-7362676)
chr7 (209-313)||(16366526-16366630)
chr7 (209-313)||(21151160-21151264)
chr7 (209-301)||(44647984-44648076)
chr7 (246-304)||(24193610-24193668)
chr7 (200-313)||(47500236-47500350)
chr7 (244-313)||(8149617-8149686)
chr7 (248-313)||(45260429-45260494)
chr7 (209-277)||(5463867-5463934)
chr7 (210-313)||(29631056-29631156)
chr7 (243-313)||(19027680-19027751)
chr7 (243-313)||(20726885-20726956)
chr7 (246-305)||(46802331-46802390)
chr7 (198-264)||(44390835-44390900)
chr7 (231-288)||(18064588-18064643)
chr7 (200-313)||(18198264-18198377)
chr7 (244-313)||(30588543-30588612)
[»] chr4 (33 HSPs)
chr4 (209-313)||(19901881-19901985)
chr4 (209-313)||(23610650-23610754)
chr4 (204-305)||(36532641-36532741)
chr4 (209-313)||(5416429-5416532)
chr4 (201-272)||(15178628-15178699)
chr4 (202-312)||(56453777-56453886)
chr4 (200-313)||(56558287-56558400)
chr4 (205-313)||(1871285-1871392)
chr4 (210-296)||(5815267-5815350)
chr4 (243-313)||(5763159-5763229)
chr4 (244-313)||(56269074-56269143)
chr4 (209-313)||(3952133-3952237)
chr4 (209-313)||(34778429-34778533)
chr4 (206-313)||(42844148-42844254)
chr4 (244-313)||(23474119-23474188)
chr4 (248-313)||(24073624-24073689)
chr4 (207-272)||(33841766-33841830)
chr4 (204-304)||(47922324-47922425)
chr4 (244-313)||(48914516-48914585)
chr4 (209-313)||(18207003-18207107)
chr4 (244-313)||(5524455-5524524)
chr4 (207-313)||(13493280-13493387)
chr4 (252-313)||(30567909-30567970)
chr4 (244-313)||(36688186-36688255)
chr4 (244-313)||(50483554-50483623)
chr4 (209-313)||(33247093-33247197)
chr4 (209-313)||(39862525-39862629)
chr4 (251-313)||(33262557-33262619)
chr4 (244-313)||(1015852-1015921)
chr4 (243-280)||(5817976-5818013)
chr4 (209-313)||(12312438-12312543)
chr4 (215-300)||(36003216-36003300)
chr4 (281-313)||(46804639-46804671)
[»] scaffold0062 (2 HSPs)
scaffold0062 (226-313)||(58688-58774)
scaffold0062 (226-313)||(70799-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (248-313)||(7155-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (244-313)||(29567-29636)
[»] scaffold0012 (1 HSPs)
scaffold0012 (209-313)||(208071-208175)
[»] scaffold0035 (1 HSPs)
scaffold0035 (248-313)||(16399-16464)
[»] scaffold0008 (1 HSPs)
scaffold0008 (248-313)||(9203-9268)
[»] scaffold0171 (1 HSPs)
scaffold0171 (251-313)||(17311-17373)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 4e-84; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 34897743 - 34897940
Alignment:
Q  18 ttcttaaatgttgtagaaatggacaaatcagctgatnnnnnnnn-tagaagtggacatcttcaataccgttttgttcggtagaactataattttgataca 116  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34897743 ttcttaaatgttgtagaaatggacaaatcagctgataaaaaaaaatagaagtggacatcttcaataccgttttgttcggtagaactataattttgataca 34897842  T
Q  117 aatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttggaatccaagtcaacatgtaatagaggtgggtgagaggggttaggatcct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34897843 aatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcggaatccaagtcaacatgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 1995573 - 1995452
Alignment:
Q  192 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 291  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  292 taagtgggtcccactatcatta 313  Q
    |||||| ||| ||| |||||||    
T  1995473 taagtgagtctcaccatcatta 1995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  203 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 277  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 19830394 - 19830498
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  309 catta 313  Q
    |||||    
T  19830494 catta 19830498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 27033763 - 27033659
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  309 catta 313  Q
    |||||    
T  27033663 catta 27033659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 43719910 - 43720014
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  309 catta 313  Q
    |||||    
T  43720010 catta 43720014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 44638052 - 44637950
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 309  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  310 atta 313  Q
    ||||    
T  44637953 atta 44637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 10474400 - 10474489
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 297  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| ||||||||    
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtg 10474489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 2230056 - 2229991
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcatta 2229991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 29586447 - 29586344
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  309 catta 313  Q
    |||||    
T  29586348 catta 29586344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 33632899 - 33632849
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaa 294  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaa 33632849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 54911732 - 54911662
Alignment:
Q  243 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| |||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcatta 54911662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 34373904 - 34373839
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcatta 34373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 48084939 - 48084827
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 300  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  301 cccactatcatta 313  Q
    ||||  |||||||    
T  48084839 cccatcatcatta 48084827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 51982549 - 51982636
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 297  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| |||||||||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtg 51982636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 34373593 - 34373652
Alignment:
Q  254 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 34373652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 276
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 276  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 31523666 - 31523735
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcatta 31523735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 40851886 - 40851782
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  309 catta 313  Q
    |||||    
T  40851786 catta 40851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 302
Target Start/End: Original strand, 47750274 - 47750361
Alignment:
Q  214 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcc 47750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 311
Target Start/End: Original strand, 25285843 - 25285902
Alignment:
Q  252 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcat 311  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| |||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcat 25285902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 46167466 - 46167416
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgg 298  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtgg 46167416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 550814 - 550875
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| |||||||||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccac 550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 42613157 - 42613088
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcatta 42613088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 49679268 - 49679337
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcatta 49679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 7e-43; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 7215807 - 7215919
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  301 cccactatcatta 313  Q
    |||||||||||||    
T  7215907 cccactatcatta 7215919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 201 - 312
Target Start/End: Original strand, 2800566 - 2800677
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  301 cccactatcatt 312  Q
    ||||| ||||||    
T  2800666 cccaccatcatt 2800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 4804569 - 4804456
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 299  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  300 tcccactatcatta 313  Q
    |||||| |||||||    
T  4804469 tcccaccatcatta 4804456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 7162196 - 7162092
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  309 catta 313  Q
    |||||    
T  7162096 catta 7162092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 21159332 - 21159436
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  309 catta 313  Q
    |||||    
T  21159432 catta 21159436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 17828532 - 17828626
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatccca 17828626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 27826608 - 27826546
Alignment:
Q  251 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 27826546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 23936365 - 23936269
Alignment:
Q  211 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | |||||||||||||||||||||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccac 23936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 17944274 - 17944170
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  309 catta 313  Q
    |||||    
T  17944174 catta 17944170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 12412710 - 12412645
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcatta 12412645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 13089751 - 13089816
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcatta 13089816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 24484956 - 24484887
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcatta 24484887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 227526 - 227622
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtccca 304  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatccca 227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacac 244  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 32254031 - 32254098
Alignment:
Q  246 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcatta 32254098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 1249150 - 1249213
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcatta 1249213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  244 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  252 agagagatagacacataaaatagataatgggtcctacca 290  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 13888520 - 13888590
Alignment:
Q  244 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  |||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcatta 13888590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 2142291 - 2142360
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcatta 2142360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 313
Target Start/End: Complemental strand, 29698216 - 29698171
Alignment:
Q  268 aaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcatta 29698171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 266  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 7e-43; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 39426330 - 39426218
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  301 cccactatcatta 313  Q
    |||||||||||||    
T  39426230 cccactatcatta 39426218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 32887735 - 32887847
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 299  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  300 tcccactatcatta 313  Q
    |||||| |||||||    
T  32887834 tcccaccatcatta 32887847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 289
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  203 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 289  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 26860010 - 26860117
Alignment:
Q  205 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  305 ctatcatta 313  Q
    | |||||||    
T  26860109 caatcatta 26860117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 26372362 - 26372268
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||    
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccac 26372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 50294026 - 50294130
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  309 catta 313  Q
    |||||    
T  50294126 catta 50294130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 5047379 - 5047448
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcatta 5047448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 12151840 - 12151775
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcatta 12151775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 32618911 - 32618809
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| || ||||||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatat-aaatagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  309 catta 313  Q
    |||||    
T  32618813 catta 32618809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 24977318 - 24977248
Alignment:
Q  243 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| |||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcatta 24977248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 18976260 - 18976372
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 300  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  301 cccactatcatta 313  Q
    ||||  |||||||    
T  18976360 cccatcatcatta 18976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 50484498 - 50484402
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccac 50484402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 30077642 - 30077711
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcatta 30077711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 5854799 - 5854913
Alignment:
Q  198 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 297  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  298 ggtcccactatcatta 313  Q
    | |||||  |||||||    
T  5854898 gatcccatcatcatta 5854913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 24413291 - 24413349
Alignment:
Q  255 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcatta 24413349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 48327156 - 48327210
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    ||||||||||||||||| | |||||||||  || ||||||||| |||||||||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggtcc 48327210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 264  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 52280037 - 52280106
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 52280106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 266  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 276  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 276  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 285  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 30709228 - 30709118
Alignment:
Q  203 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  303 cactatcatta 313  Q
    ||| |||||||    
T  30709128 caccatcatta 30709118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 4446852 - 4446963
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  302 ccactatcatta 313  Q
     |||||||||||    
T  4446952 tcactatcatta 4446963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 19908899 - 19908788
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 299  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  300 tcccactatcatta 313  Q
    |||||| |||||||    
T  19908801 tcccaccatcatta 19908788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 277  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 31618724 - 31618834
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  301 cccactatcatta 313  Q
    ||||| |||||||    
T  31618822 cccacaatcatta 31618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 13238793 - 13238689
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  309 catta 313  Q
    |||||    
T  13238693 catta 13238689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 35316937 - 35316833
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  309 catta 313  Q
    |||||    
T  35316837 catta 35316833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 15709862 - 15709776
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 15709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 271  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 28564961 - 28564900
Alignment:
Q  252 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 28564900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 2063472 - 2063361
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 300  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  301 cccactatcatta 313  Q
     |||| |||||||    
T  2063373 tccaccatcatta 2063361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 30857638 - 30857745
Alignment:
Q  205 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  305 ctatcatta 313  Q
    | |||||||    
T  30857737 ccatcatta 30857745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 36929810 - 36929743
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaa 294  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || |||||||||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaa 36929743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 34512022 - 34512092
Alignment:
Q  243 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| |||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcatta 34512092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 38397158 - 38397092
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 310  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| ||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatca 38397092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 8988932 - 8988863
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcatta 8988863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 35315286 - 35315347
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || |||||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccac 35315347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 21454494 - 21454561
Alignment:
Q  245 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcatta 21454561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 275  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 375070 - 375001
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcatta 375001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 23259489 - 23259554
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcatta 23259554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 35315620 - 35315521
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 15722328 - 15722242
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| |||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcatta 15722242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  203 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 252  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 23459844 - 23459913
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcatta 23459913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 9e-30; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 203 - 313
Target Start/End: Complemental strand, 42761831 - 42761721
Alignment:
Q  203 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  303 cactatcatta 313  Q
    ||  |||||||    
T  42761731 catcatcatta 42761721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 21360400 - 21360299
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 295  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  296 tgg 298  Q
    |||    
T  21360301 tgg 21360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 30426671 - 30426736
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 30426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 28069831 - 28069727
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  309 catta 313  Q
    |||||    
T  28069731 catta 28069727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 36991468 - 36991364
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  309 catta 313  Q
    |||||    
T  36991368 catta 36991364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 18689585 - 18689499
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 18689499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 24557162 - 24557248
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  |||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcatta 24557248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 26749546 - 26749615
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcatta 26749615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 42338008 - 42338113
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 306  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  307 atcatta 313  Q
    |||||||    
T  42338107 atcatta 42338113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 6014307 - 6014202
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 307  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  308 tcatta 313  Q
    ||||||    
T  6014207 tcatta 6014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 17520459 - 17520403
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggt 17520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 36748492 - 36748558
Alignment:
Q  246 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcatta 36748558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 40695249 - 40695314
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| |||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcatta 40695314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 10672519 - 10672579
Alignment:
Q  253 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcatta 10672579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 37966397 - 37966487
Alignment:
Q  199 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacca 290  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | ||||||||||    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctacca 37966487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  198 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 264  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 34612640 - 34612572
Alignment:
Q  245 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcatta 34612572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 29341106 - 29341003
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  309 catta 313  Q
    |||||    
T  29341007 catta 29341003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 35660572 - 35660676
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  309 catta 313  Q
    |||||    
T  35660672 catta 35660676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 4895699 - 4895802
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 309  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  310 atta 313  Q
    ||||    
T  4895799 atta 4895802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 305
Target Start/End: Complemental strand, 11775905 - 11775809
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccac 11775809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 18625384 - 18625488
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  309 catta 313  Q
    |||||    
T  18625484 catta 18625488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 32129580 - 32129684
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  309 catta 313  Q
    |||||    
T  32129680 catta 32129684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 37266843 - 37266739
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  309 catta 313  Q
    |||||    
T  37266743 catta 37266739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 43309220 - 43309116
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  309 catta 313  Q
    |||||    
T  43309120 catta 43309116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 14349876 - 14349811
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 14349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 31653112 - 31653043
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| |||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcatta 31653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 40753164 - 40753229
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 40753229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 13032230 - 13032126
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  309 catta 313  Q
    |||||    
T  13032130 catta 13032126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 34827287 - 34827208
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| ||||||||||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccac 34827208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 273  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 39902525 - 39902423
Alignment:
Q  211 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 310  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  311 tta 313  Q
    |||    
T  39902425 tta 39902423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 10362012 - 10362069
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    ||||| ||||||||||||| ||||||||| | || ||| |||||||||||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtc 10362069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  252 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 18653438 - 18653385
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 297  Q
    ||||||| ||||||||||||||| |||||||||| || || |||||||||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtg 18653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 27428879 - 27428948
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| |||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcatta 27428948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 36290679 - 36290610
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 36290610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 2984389 - 2984457
Alignment:
Q  245 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcatta 2984457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatgg 236  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 3057152 - 3057205
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 297  Q
    ||||||||| ||||||| ||||| |||||||||  ||| |||||||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtg 3057205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 31279990 - 31279933
Alignment:
Q  245 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| ||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcc 31279933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 31546563 - 31546503
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatccca 31546503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 291  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 4888579 - 4888475
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  309 catta 313  Q
    |||||    
T  4888479 catta 4888475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 25084730 - 25084795
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 25084795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 40023215 - 40023315
Alignment:
Q  204 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 303  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  304 ac 305  Q
    ||    
T  40023314 ac 40023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 9559017 - 9559121
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  309 catta 313  Q
    |||||    
T  9559117 catta 9559121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  240 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 296  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 32916033 - 32915966
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcat 311  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| |||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcat 32915966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 39855770 - 39855880
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  302 ccactatcatta 313  Q
    |||  |||||||    
T  39855869 ccatcatcatta 39855880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 12139400 - 12139334
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcatta 12139334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 33450627 - 33450514
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 299  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  300 tcccactatcatta 313  Q
    |||||  |||||||    
T  33450527 tcccatcatcatta 33450514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 47799898 - 47799967
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcatta 47799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 302
Target Start/End: Complemental strand, 989239 - 989148
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 302  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| |||||    
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtcc 989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 7712331 - 7712426
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| ||||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccac 7712426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 7373985 - 7373875
Alignment:
Q  202 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  302 ccactatcatta 313  Q
    ||||||||||||    
T  7373886 ccactatcatta 7373875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 7362676 - 7362576
Alignment:
Q  213 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 312  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  313 a 313  Q
    |    
T  7362576 a 7362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 16366630 - 16366526
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  309 catta 313  Q
    |||||    
T  16366530 catta 16366526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 21151264 - 21151160
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  309 catta 313  Q
    |||||    
T  21151164 catta 21151160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 44648076 - 44647984
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 301  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||||    
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtc 44647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 24193668 - 24193610
Alignment:
Q  246 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatccca 24193610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 313
Target Start/End: Original strand, 47500236 - 47500350
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 298  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  299 gtcccactatcatta 313  Q
    ||||||  |||||||    
T  47500336 gtcccatcatcatta 47500350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 8149686 - 8149617
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcatta 8149617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 45260429 - 45260494
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcatta 45260494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 277  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 29631156 - 29631056
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 309  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  310 atta 313  Q
    ||||    
T  29631059 atta 29631056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  243 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 313
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  243 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 46802331 - 46802390
Alignment:
Q  246 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| ||||||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccac 46802390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  198 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 264  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  231 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 288  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 18198377 - 18198264
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 299  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  300 tcccactatcatta 313  Q
    |||||| |||||||    
T  18198277 tcccaccatcatta 18198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 30588612 - 30588543
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcatta 30588543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 19901881 - 19901985
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  309 catta 313  Q
    |||||    
T  19901981 catta 19901985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 23610754 - 23610650
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  309 catta 313  Q
    |||||    
T  23610654 catta 23610650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 36532741 - 36532641
Alignment:
Q  204 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 303  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  304 ac 305  Q
    ||    
T  36532642 ac 36532641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 5416429 - 5416532
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  309 catta 313  Q
    |||||    
T  5416528 catta 5416532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 15178628 - 15178699
Alignment:
Q  201 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 272  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 56453777 - 56453886
Alignment:
Q  202 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  301 cccactatcatt 312  Q
    ||||| ||||||    
T  56453875 cccaccatcatt 56453886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 56558400 - 56558287
Alignment:
Q  200 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 299  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  300 tcccactatcatta 313  Q
    |||||| |||||||    
T  56558300 tcccaccatcatta 56558287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 313
Target Start/End: Complemental strand, 1871392 - 1871285
Alignment:
Q  205 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  305 ctatcatta 313  Q
      |||||||    
T  1871293 tcatcatta 1871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  210 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 296  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 5763159 - 5763229
Alignment:
Q  243 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcatta 5763229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 56269074 - 56269143
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcatta 56269143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 3952133 - 3952237
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  309 catta 313  Q
    |||||    
T  3952233 catta 3952237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 34778533 - 34778429
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  309 catta 313  Q
    |||||    
T  34778433 catta 34778429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 42844148 - 42844254
Alignment:
Q  206 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 305  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  306 tatcatta 313  Q
     |||||||    
T  42844247 catcatta 42844254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 23474188 - 23474119
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| |||||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcatta 23474119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 24073689 - 24073624
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | |||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcatta 24073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 272  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 47922324 - 47922425
Alignment:
Q  204 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 302  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  303 ca 304  Q
    ||    
T  47922424 ca 47922425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 48914516 - 48914585
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || |||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcatta 48914585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 18207003 - 18207107
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  309 catta 313  Q
    |||||    
T  18207103 catta 18207107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 5524524 - 5524455
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcatta 5524455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 313
Target Start/End: Complemental strand, 13493387 - 13493280
Alignment:
Q  207 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 304  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  305 ctatcatta 313  Q
     ||||||||    
T  13493288 ttatcatta 13493280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 30567970 - 30567909
Alignment:
Q  252 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcatta 30567909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 36688186 - 36688255
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| |||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcatta 36688255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 50483554 - 50483623
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcatta 50483623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 33247093 - 33247197
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  309 catta 313  Q
    |||||    
T  33247193 catta 33247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 39862629 - 39862525
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  309 catta 313  Q
    |||||    
T  39862529 catta 39862525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 33262557 - 33262619
Alignment:
Q  251 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcatta 33262619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 1015852 - 1015921
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcatta 1015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 280
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  243 acaatttggagagagatagacacataaaatagataatg 280  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 313
Target Start/End: Original strand, 12312438 - 12312543
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 307  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  308 tcatta 313  Q
    ||||||    
T  12312538 tcatta 12312543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  215 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 300  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 313
Target Start/End: Complemental strand, 46804671 - 46804639
Alignment:
Q  281 ggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||||||||| ||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcatta 46804639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 58774 - 58688
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  |||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcatta 58688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 70885 - 70799
Alignment:
Q  226 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| |||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcatta 70799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 7220 - 7155
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcatta 7155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 29567 - 29636
Alignment:
Q  244 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcatta 29636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 208175 - 208071
Alignment:
Q  209 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 308  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  309 catta 313  Q
    |||||    
T  208075 catta 208071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 16399 - 16464
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcatta 16464  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 9203 - 9268
Alignment:
Q  248 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| |||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcatta 9268  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 17311 - 17373
Alignment:
Q  251 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 313  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcatta 17373  T

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