View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7577_2D_high_5 (Length: 793)

Name: NF7577_2D_high_5
Description: NF7577_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7577_2D_high_5
NF7577_2D_high_5
[»] scaffold0169 (1 HSPs)
scaffold0169 (194-541)||(2612-2959)
[»] chr8 (60 HSPs)
chr8 (194-545)||(758811-759164)
chr8 (64-185)||(35482701-35482822)
chr8 (64-181)||(17875771-17875888)
chr8 (64-184)||(30904586-30904705)
chr8 (67-185)||(2967869-2967987)
chr8 (64-185)||(27912094-27912216)
chr8 (64-185)||(27958513-27958635)
chr8 (83-185)||(2968114-2968216)
chr8 (67-180)||(10682288-10682402)
chr8 (68-184)||(44379522-44379638)
chr8 (64-182)||(17844107-17844224)
chr8 (83-185)||(17876014-17876116)
chr8 (83-185)||(27912342-27912444)
chr8 (83-185)||(27958761-27958863)
chr8 (83-185)||(35482946-35483048)
chr8 (64-185)||(13327488-13327611)
chr8 (68-185)||(3691581-3691699)
chr8 (83-185)||(30904360-30904462)
chr8 (68-185)||(23792810-23792926)
chr8 (70-184)||(30928541-30928658)
chr8 (64-184)||(38464641-38464760)
chr8 (67-185)||(27523183-27523301)
chr8 (83-185)||(10682060-10682161)
chr8 (83-185)||(14577108-14577212)
chr8 (83-185)||(3691830-3691932)
chr8 (127-185)||(20178370-20178428)
chr8 (64-185)||(20223098-20223226)
chr8 (67-172)||(4128753-4128858)
chr8 (88-184)||(38464887-38464982)
chr8 (68-185)||(42123931-42124051)
chr8 (127-184)||(13327262-13327319)
chr8 (372-503)||(14714909-14715041)
chr8 (83-171)||(44379771-44379859)
chr8 (67-114)||(7899830-7899877)
chr8 (127-182)||(30928315-30928370)
chr8 (68-111)||(31231317-31231360)
chr8 (126-184)||(20223394-20223452)
chr8 (126-184)||(21660983-21661041)
chr8 (126-184)||(30253882-30253940)
chr8 (83-183)||(42123703-42123802)
chr8 (126-169)||(30463929-30463972)
chr8 (126-169)||(34213400-34213443)
chr8 (126-184)||(28828472-28828530)
chr8 (1-33)||(10682212-10682244)
chr8 (126-182)||(13795516-13795572)
chr8 (1-33)||(30904513-30904545)
chr8 (1-33)||(35482863-35482895)
chr8 (126-182)||(37727201-37727257)
chr8 (126-185)||(148292-148351)
chr8 (126-185)||(21660725-21660784)
chr8 (127-182)||(26938441-26938496)
chr8 (126-169)||(27712779-27712822)
chr8 (126-185)||(33279194-33279253)
chr8 (126-165)||(34632244-34632283)
chr8 (126-184)||(10925358-10925416)
chr8 (126-184)||(27713020-27713078)
chr8 (126-184)||(34199091-34199149)
chr8 (1-34)||(20223266-20223299)
chr8 (126-183)||(29596403-29596460)
chr8 (128-185)||(39198614-39198671)
[»] chr5 (61 HSPs)
chr5 (64-185)||(40833935-40834056)
chr5 (64-184)||(32936431-32936551)
chr5 (64-184)||(20769712-20769832)
chr5 (64-184)||(2094798-2094918)
chr5 (64-184)||(30370737-30370856)
chr5 (64-185)||(13600671-13600792)
chr5 (64-185)||(18485885-18486006)
chr5 (68-185)||(35363218-35363336)
chr5 (64-185)||(7145532-7145658)
chr5 (68-184)||(19558102-19558218)
chr5 (64-185)||(3539822-3539942)
chr5 (68-185)||(15179019-15179136)
chr5 (68-185)||(35362147-35362264)
chr5 (83-184)||(35362984-35363085)
chr5 (64-184)||(27843023-27843143)
chr5 (83-185)||(32936205-32936307)
chr5 (83-184)||(18485659-18485760)
chr5 (83-184)||(40834180-40834281)
chr5 (83-185)||(2094574-2094676)
chr5 (64-184)||(7145763-7145884)
chr5 (83-184)||(30370511-30370612)
chr5 (64-185)||(13600443-13600567)
chr5 (64-182)||(20769936-20770056)
chr5 (68-184)||(25363016-25363131)
chr5 (68-185)||(132278-132393)
chr5 (68-185)||(32994376-32994501)
chr5 (126-185)||(20339155-20339214)
chr5 (133-185)||(37093738-37093790)
chr5 (83-185)||(25363260-25363362)
chr5 (64-112)||(14274308-14274356)
chr5 (83-181)||(3539600-3539699)
chr5 (127-185)||(32458075-32458133)
chr5 (83-184)||(15178789-15178890)
chr5 (64-111)||(3294396-3294443)
chr5 (68-111)||(42858555-42858598)
chr5 (64-162)||(38981786-38981884)
chr5 (385-494)||(24541419-24541527)
chr5 (68-112)||(33568984-33569028)
chr5 (126-181)||(132048-132103)
chr5 (194-280)||(24541363-24541449)
chr5 (400-502)||(38015340-38015442)
chr5 (67-112)||(27342885-27342930)
chr5 (1-34)||(35363135-35363168)
chr5 (1-33)||(18485812-18485844)
chr5 (1-33)||(30370663-30370695)
chr5 (1-33)||(32936358-32936390)
chr5 (1-33)||(40834097-40834129)
chr5 (126-185)||(1643538-1643597)
chr5 (126-169)||(2467074-2467117)
chr5 (385-436)||(9012263-9012314)
chr5 (126-185)||(16736800-16736859)
chr5 (68-111)||(19850516-19850559)
chr5 (126-169)||(24858418-24858461)
chr5 (126-185)||(40952066-40952125)
chr5 (126-184)||(2426229-2426287)
chr5 (126-184)||(14871734-14871792)
chr5 (126-184)||(19131126-19131184)
chr5 (126-184)||(33429789-33429847)
chr5 (126-184)||(39589615-39589673)
chr5 (1-34)||(2094724-2094757)
chr5 (1-34)||(3539748-3539781)
[»] chr4 (87 HSPs)
chr4 (64-185)||(23163505-23163626)
chr4 (64-185)||(49621438-49621559)
chr4 (64-184)||(26202522-26202642)
chr4 (64-184)||(33692262-33692382)
chr4 (64-182)||(50161342-50161460)
chr4 (64-184)||(28458747-28458867)
chr4 (64-185)||(9526034-9526155)
chr4 (64-185)||(48419442-48419563)
chr4 (64-185)||(21053521-21053642)
chr4 (64-184)||(42857027-42857147)
chr4 (64-184)||(37872767-37872889)
chr4 (64-184)||(41689389-41689511)
chr4 (64-182)||(3546490-3546609)
chr4 (64-172)||(5260206-5260313)
chr4 (64-184)||(55140198-55140317)
chr4 (64-185)||(20931202-20931324)
chr4 (66-184)||(21707830-21707948)
chr4 (64-172)||(13294614-13294723)
chr4 (67-185)||(33369508-33369628)
chr4 (64-185)||(46143496-46143617)
chr4 (64-184)||(52690321-52690443)
chr4 (83-185)||(13294847-13294949)
chr4 (83-185)||(49621682-49621784)
chr4 (83-184)||(23163281-23163382)
chr4 (80-185)||(20930974-20931079)
chr4 (64-181)||(33369736-33369854)
chr4 (68-185)||(25297679-25297798)
chr4 (64-184)||(9525805-9525929)
chr4 (64-185)||(42856803-42856924)
chr4 (83-181)||(50161118-50161218)
chr4 (64-182)||(28458523-28458643)
chr4 (83-183)||(46143273-46143373)
chr4 (68-184)||(30055208-30055326)
chr4 (64-185)||(23549723-23549847)
chr4 (83-185)||(55742852-55742954)
chr4 (83-185)||(33692507-33692608)
chr4 (68-184)||(2685985-2686097)
chr4 (83-185)||(37873007-37873109)
chr4 (64-185)||(3546713-3546837)
chr4 (83-185)||(52690095-52690196)
chr4 (126-181)||(30799295-30799350)
chr4 (82-184)||(55742621-55742723)
chr4 (126-183)||(30799611-30799668)
chr4 (374-503)||(37531594-37531723)
chr4 (129-185)||(30055494-30055550)
chr4 (83-184)||(5260437-5260538)
chr4 (64-165)||(22335454-22335554)
chr4 (83-170)||(23549473-23549560)
chr4 (126-185)||(32488583-32488642)
chr4 (372-503)||(50158506-50158637)
chr4 (68-114)||(30799391-30799437)
chr4 (83-181)||(41689636-41689734)
chr4 (64-110)||(50977677-50977723)
chr4 (68-112)||(53232328-53232372)
chr4 (127-183)||(55140485-55140541)
chr4 (83-153)||(21053329-21053399)
chr4 (127-181)||(25297969-25298023)
chr4 (1-34)||(3546650-3546683)
chr4 (1-33)||(9525961-9525993)
chr4 (1-33)||(20931129-20931161)
chr4 (1-33)||(21707755-21707787)
chr4 (1-33)||(23163432-23163464)
chr4 (129-169)||(23963107-23963147)
chr4 (1-33)||(33369673-33369705)
chr4 (1-33)||(41689553-41689585)
chr4 (1-33)||(42856954-42856986)
chr4 (1-33)||(48419369-48419401)
chr4 (1-33)||(49621600-49621632)
chr4 (1-33)||(55742769-55742801)
chr4 (126-185)||(9902652-9902711)
chr4 (126-185)||(10993624-10993683)
chr4 (126-185)||(20983913-20983972)
chr4 (126-185)||(20984170-20984229)
chr4 (126-185)||(32922323-32922382)
chr4 (227-283)||(42728384-42728442)
chr4 (126-185)||(52654188-52654247)
chr4 (126-184)||(21360457-21360515)
chr4 (126-184)||(45655948-45656006)
chr4 (126-184)||(52538135-52538193)
chr4 (126-184)||(52653931-52653989)
chr4 (68-113)||(563721-563765)
chr4 (128-169)||(9644767-9644808)
chr4 (64-113)||(17872388-17872437)
chr4 (1-34)||(21053447-21053480)
chr4 (367-396)||(22192582-22192611)
chr4 (1-34)||(37872924-37872957)
chr4 (75-112)||(43914640-43914676)
[»] chr3 (60 HSPs)
chr3 (64-185)||(22316719-22316840)
chr3 (64-181)||(36229766-36229883)
chr3 (64-185)||(37513090-37513211)
chr3 (64-185)||(25847444-25847565)
chr3 (64-184)||(28829753-28829872)
chr3 (64-185)||(8852030-8852152)
chr3 (64-185)||(22975344-22975465)
chr3 (64-183)||(48434027-48434147)
chr3 (64-166)||(49984936-49985038)
chr3 (64-184)||(23043414-23043535)
chr3 (64-185)||(49620977-49621098)
chr3 (83-185)||(8851803-8851905)
chr3 (64-185)||(25847669-25847791)
chr3 (88-184)||(37513340-37513436)
chr3 (83-184)||(22316964-22317065)
chr3 (68-181)||(44506049-44506162)
chr3 (64-185)||(17574372-17574492)
chr3 (83-184)||(49621223-49621324)
chr3 (83-182)||(11121526-11121626)
chr3 (64-161)||(55009121-55009217)
chr3 (83-182)||(22975589-22975688)
chr3 (64-183)||(49711626-49711743)
chr3 (83-181)||(48433801-48433901)
chr3 (83-185)||(28829996-28830099)
chr3 (83-181)||(36230007-36230106)
chr3 (83-185)||(49711400-49711501)
chr3 (64-185)||(11121282-11121405)
chr3 (127-185)||(9296382-9296440)
chr3 (126-184)||(33491692-33491750)
chr3 (83-184)||(44506288-44506389)
chr3 (126-182)||(55009386-55009442)
chr3 (83-181)||(3612598-3612697)
chr3 (64-107)||(9296607-9296650)
chr3 (126-185)||(33491601-33491660)
chr3 (126-181)||(23043186-23043241)
chr3 (64-184)||(35850875-35850994)
chr3 (68-113)||(1341957-1342002)
chr3 (126-182)||(10687880-10687936)
chr3 (126-185)||(2862700-2862759)
chr3 (64-111)||(12012782-12012829)
chr3 (126-185)||(41944132-41944191)
chr3 (67-181)||(3612826-3612938)
chr3 (126-184)||(39930633-39930691)
chr3 (69-111)||(43006987-43007029)
chr3 (1-34)||(49711551-49711584)
chr3 (1-33)||(8851957-8851989)
chr3 (1-33)||(25847606-25847638)
chr3 (1-33)||(49621139-49621171)
chr3 (126-181)||(1342180-1342235)
chr3 (229-280)||(29195980-29196031)
chr3 (126-185)||(31574509-31574568)
chr3 (126-185)||(50711251-50711310)
chr3 (126-184)||(11220992-11221050)
chr3 (126-184)||(14463379-14463437)
chr3 (126-184)||(20209150-20209208)
chr3 (126-184)||(44664621-44664679)
chr3 (126-184)||(51000641-51000699)
chr3 (64-105)||(7603619-7603660)
chr3 (1-34)||(22975506-22975539)
chr3 (68-113)||(34333730-34333775)
[»] chr2 (56 HSPs)
chr2 (64-185)||(9320028-9320149)
chr2 (64-185)||(18916624-18916745)
chr2 (64-185)||(17846007-17846128)
chr2 (64-181)||(44536410-44536527)
chr2 (64-184)||(10044745-10044865)
chr2 (64-184)||(20364196-20364316)
chr2 (64-181)||(4261156-4261273)
chr2 (64-184)||(10108813-10108934)
chr2 (64-172)||(2318505-2318612)
chr2 (65-185)||(8322411-8322529)
chr2 (83-185)||(27360366-27360468)
chr2 (68-184)||(30337424-30337540)
chr2 (83-182)||(9319804-9319903)
chr2 (83-185)||(17846252-17846354)
chr2 (83-185)||(18916869-18916971)
chr2 (66-185)||(27360118-27360239)
chr2 (83-185)||(2318735-2318836)
chr2 (83-184)||(20363970-20364071)
chr2 (64-184)||(601327-601449)
chr2 (64-183)||(10109039-10109160)
chr2 (64-185)||(4261377-4261502)
chr2 (126-185)||(601620-601679)
chr2 (127-181)||(5547339-5547393)
chr2 (126-184)||(10045035-10045092)
chr2 (68-181)||(13862496-13862608)
chr2 (67-113)||(37084688-37084734)
chr2 (127-184)||(18178377-18178434)
chr2 (617-662)||(20117722-20117767)
chr2 (126-185)||(44536178-44536237)
chr2 (127-185)||(31769781-31769839)
chr2 (70-111)||(10520866-10520907)
chr2 (64-111)||(9991921-9991968)
chr2 (126-185)||(30337716-30337775)
chr2 (126-184)||(10714008-10714066)
chr2 (68-106)||(43520401-43520439)
chr2 (126-183)||(33274653-33274710)
chr2 (1-33)||(2318653-2318685)
chr2 (391-503)||(3395029-3395141)
chr2 (1-33)||(18916786-18916818)
chr2 (1-33)||(20364123-20364155)
chr2 (1-33)||(27360282-27360314)
chr2 (126-185)||(1650759-1650818)
chr2 (67-106)||(5547308-5547347)
chr2 (126-169)||(11723720-11723763)
chr2 (126-185)||(30488336-30488395)
chr2 (68-111)||(31770014-31770057)
chr2 (126-185)||(40710315-40710374)
chr2 (143-185)||(981780-981822)
chr2 (141-183)||(5547103-5547145)
chr2 (127-185)||(26499421-26499479)
chr2 (126-184)||(26499667-26499725)
chr2 (126-184)||(35412133-35412191)
chr2 (68-102)||(44769387-44769421)
chr2 (126-163)||(2450109-2450146)
chr2 (126-183)||(28789123-28789180)
chr2 (1-34)||(44536335-44536368)
[»] chr1 (60 HSPs)
chr1 (64-185)||(2026720-2026841)
chr1 (64-185)||(1549326-1549447)
chr1 (64-185)||(17611650-17611771)
chr1 (64-182)||(30002435-30002552)
chr1 (64-185)||(30562783-30562903)
chr1 (64-172)||(40902553-40902661)
chr1 (64-185)||(12139023-12139144)
chr1 (64-185)||(17985513-17985634)
chr1 (64-181)||(25780115-25780231)
chr1 (64-184)||(7114089-7114208)
chr1 (83-184)||(40902327-40902428)
chr1 (83-185)||(17611424-17611526)
chr1 (83-181)||(17985290-17985388)
chr1 (83-184)||(2026964-2027065)
chr1 (89-185)||(7113864-7113960)
chr1 (83-185)||(12115196-12115298)
chr1 (83-181)||(30002214-30002312)
chr1 (88-184)||(12139273-12139370)
chr1 (83-185)||(30563027-30563130)
chr1 (64-182)||(25779887-25780010)
chr1 (83-184)||(19897176-19897277)
chr1 (64-185)||(19897402-19897525)
chr1 (83-185)||(4969609-4969711)
chr1 (68-168)||(4969380-4969481)
chr1 (64-182)||(12114954-12115074)
chr1 (374-503)||(28961975-28962104)
chr1 (130-185)||(40290073-40290128)
chr1 (127-185)||(25267441-25267499)
chr1 (126-185)||(5586486-5586545)
chr1 (126-169)||(26874483-26874526)
chr1 (126-185)||(29233686-29233745)
chr1 (441-503)||(31089937-31090000)
chr1 (126-185)||(35521463-35521522)
chr1 (126-169)||(45315512-45315555)
chr1 (126-184)||(34480440-34480498)
chr1 (65-111)||(44066951-44066997)
chr1 (126-184)||(49564185-49564243)
chr1 (360-502)||(31421019-31421163)
chr1 (68-113)||(47193958-47194003)
chr1 (1-33)||(7114016-7114048)
chr1 (1-33)||(17611577-17611609)
chr1 (66-184)||(25267181-25267294)
chr1 (68-112)||(30306852-30306896)
chr1 (1-33)||(30562944-30562976)
chr1 (1-33)||(40902480-40902512)
chr1 (129-184)||(49564599-49564655)
chr1 (126-185)||(5618070-5618129)
chr1 (126-169)||(6489128-6489171)
chr1 (126-185)||(25012646-25012705)
chr1 (126-185)||(34480183-34480242)
chr1 (3-33)||(2026884-2026914)
chr1 (126-184)||(4695192-4695250)
chr1 (126-184)||(7349770-7349828)
chr1 (127-185)||(8853352-8853410)
chr1 (68-110)||(9172266-9172308)
chr1 (68-110)||(9180248-9180290)
chr1 (126-184)||(28554190-28554248)
chr1 (1-31)||(30002364-30002394)
chr1 (126-184)||(31289254-31289312)
chr1 (126-184)||(39672836-39672894)
[»] chr6 (36 HSPs)
chr6 (64-184)||(3922764-3922884)
chr6 (68-185)||(3218370-3218487)
chr6 (64-185)||(4242922-4243043)
chr6 (64-183)||(33595320-33595439)
chr6 (64-183)||(14763319-14763438)
chr6 (64-185)||(23068923-23069042)
chr6 (83-185)||(23068695-23068797)
chr6 (83-185)||(33595564-33595666)
chr6 (83-185)||(4243167-4243269)
chr6 (83-184)||(6755161-6755262)
chr6 (83-183)||(3218152-3218252)
chr6 (89-185)||(3922538-3922634)
chr6 (64-156)||(6754946-6755037)
chr6 (83-185)||(14763550-14763654)
chr6 (64-185)||(10810201-10810322)
chr6 (126-182)||(14655078-14655134)
chr6 (69-113)||(20491722-20491766)
chr6 (126-184)||(28852188-28852246)
chr6 (1-33)||(3218294-3218326)
chr6 (1-33)||(4243084-4243116)
chr6 (1-33)||(6755078-6755110)
chr6 (421-497)||(15633800-15633876)
chr6 (126-185)||(2316745-2316804)
chr6 (126-185)||(9899194-9899253)
chr6 (126-185)||(9899451-9899510)
chr6 (126-169)||(13178479-13178522)
chr6 (126-169)||(22569019-22569062)
chr6 (126-185)||(24896429-24896488)
chr6 (126-181)||(30121584-30121639)
chr6 (126-169)||(32557393-32557436)
chr6 (127-185)||(1925408-1925466)
chr6 (126-184)||(10026140-10026198)
chr6 (127-185)||(10027124-10027182)
chr6 (127-185)||(21926063-21926121)
chr6 (68-109)||(11000055-11000096)
chr6 (225-283)||(24176096-24176156)
[»] chr7 (59 HSPs)
chr7 (64-185)||(32177854-32177975)
chr7 (64-185)||(49113861-49113982)
chr7 (64-172)||(32523213-32523321)
chr7 (64-182)||(28408244-28408362)
chr7 (64-182)||(37453292-37453410)
chr7 (64-185)||(19305969-19306090)
chr7 (64-185)||(8437530-8437652)
chr7 (64-185)||(2933494-2933615)
chr7 (64-184)||(7417511-7417632)
chr7 (64-185)||(45746950-45747070)
chr7 (83-182)||(32523447-32523546)
chr7 (67-185)||(1511416-1511533)
chr7 (67-185)||(10878624-10878744)
chr7 (83-185)||(28408486-28408587)
chr7 (64-172)||(32832246-32832354)
chr7 (66-185)||(31894257-31894374)
chr7 (83-185)||(8437304-8437406)
chr7 (83-181)||(32178099-32178197)
chr7 (83-185)||(7417757-7417858)
chr7 (80-181)||(32832475-32832576)
chr7 (83-181)||(2933289-2933387)
chr7 (126-185)||(19305739-19305798)
chr7 (126-185)||(49114150-49114209)
chr7 (83-185)||(24986719-24986819)
chr7 (64-185)||(44307610-44307738)
chr7 (64-117)||(29226337-29226390)
chr7 (83-185)||(31894500-31894601)
chr7 (83-184)||(1511190-1511290)
chr7 (126-184)||(44307906-44307964)
chr7 (83-169)||(45746739-45746825)
chr7 (68-113)||(27612284-27612329)
chr7 (66-111)||(30060630-30060675)
chr7 (126-185)||(7172930-7172989)
chr7 (385-435)||(4119569-4119619)
chr7 (387-503)||(24708831-24708945)
chr7 (126-159)||(37452478-37452511)
chr7 (1-33)||(8437457-8437489)
chr7 (126-182)||(8869584-8869640)
chr7 (1-33)||(28408403-28408435)
chr7 (1-33)||(32178016-32178048)
chr7 (1-33)||(32523362-32523394)
chr7 (126-185)||(8522323-8522382)
chr7 (126-169)||(10543667-10543710)
chr7 (126-169)||(34287773-34287816)
chr7 (126-185)||(38495170-38495229)
chr7 (126-185)||(41922281-41922340)
chr7 (126-185)||(43575306-43575365)
chr7 (126-185)||(45055321-45055380)
chr7 (126-185)||(45055578-45055637)
chr7 (127-181)||(10878921-10878975)
chr7 (126-184)||(12423845-12423903)
chr7 (126-184)||(21733068-21733126)
chr7 (126-184)||(31283409-31283467)
chr7 (83-117)||(37453145-37453179)
chr7 (126-184)||(42391296-42391354)
chr7 (126-184)||(44458040-44458098)
chr7 (1-34)||(1511338-1511371)
chr7 (131-184)||(43161650-43161703)
chr7 (1-34)||(44307778-44307811)
[»] scaffold0029 (2 HSPs)
scaffold0029 (67-185)||(137142-137260)
scaffold0029 (83-185)||(136915-137017)
[»] scaffold0002 (2 HSPs)
scaffold0002 (67-185)||(330423-330541)
scaffold0002 (83-185)||(330196-330298)
[»] scaffold0311 (2 HSPs)
scaffold0311 (83-185)||(12841-12943)
scaffold0311 (68-149)||(12632-12713)
[»] scaffold1577 (1 HSPs)
scaffold1577 (64-181)||(1097-1214)
[»] scaffold0347 (2 HSPs)
scaffold0347 (128-185)||(12223-12280)
scaffold0347 (129-184)||(11940-11995)
[»] scaffold0012 (1 HSPs)
scaffold0012 (374-503)||(96248-96377)
[»] scaffold0053 (1 HSPs)
scaffold0053 (65-112)||(15263-15310)
[»] scaffold0114 (1 HSPs)
scaffold0114 (371-416)||(1070-1115)


Alignment Details
Target: scaffold0169 (Bit Score: 128; Significance: 9e-66; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 194 - 541
Target Start/End: Complemental strand, 2959 - 2612
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 293  Q
    |||||||||||||| ||||||||||||||  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||| ||||||   | |    
T  2959 tgtcacattattttaaaatgtctaatacacatgtactttgacaactcaacataacacatgcatttttccactgttagatcccaccaaagaccaaacatgg 2860  T
Q  294 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 393  Q
    | |||||| ||| ||  ||| |||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||    |||||   |||  |||||||||    
T  2859 aagtttttaaaggtcgtatagaaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtataggaaatagtcggttggaggtaatttt 2760  T
Q  394 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 493  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| || |||||||| |||||| | |||||||||||| || |||||| | |    
T  2759 atagatttgtagaaggagtttaagattactagataattatgctacctaaataatacactcattatgaaaatctcacatcaatttaaaatgtctaatcagc 2660  T
Q  494 atgttttttaaggataatgaacatttattttgttgactcaacatatca 541  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  2659 atgttttttaaggataataaacatgtattttgttgactcgacatatca 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 194 - 545
Target Start/End: Complemental strand, 759164 - 758811
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 293  Q
    ||||| |||||||| |||||| |||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||||||| ||||||   | |    
T  759164 tgtcatattattttaaaatgtttaatacacatgtactttgacaactcaacataacacatgcatttttccattgttagatcccaccaaagaccaaacatgg 759065  T
Q  294 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 393  Q
    |  ||||| ||| || ||||||||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||  | ||| | | ||| ||||||||||    
T  759064 aattttttaaaggtcggatataaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtatagggaataatcagttgcgggtaatttt 758965  T
Q  394 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 493  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| |  |||||||| |||||| | |||||||||||| ||  ||||||| |    
T  758964 atatatttgtagaaggagtttaagattactagataattatgctacctaaataatccactcattatgaaaatctcacatcaatttaaaatgcctaataagc 758865  T
Q  494 atg--ttttttaaggataatgaacatttattttgttgactcaacatatcacatc 545  Q
    |||  |||||||| |||||| ||||| |||||||| ||||| ||||||||||||    
T  758864 atgttttttttaaagataataaacatgtattttgtcgactcgacatatcacatc 758811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 35482822 - 35482701
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  35482822 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 35482723  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  35482722 gactaattgtgtaattttgcct 35482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 17875888 - 17875771
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  17875888 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 17875789  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  17875788 gactaattgtgtaatttt 17875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 30904586 - 30904705
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  30904586 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagg 30904684  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  30904685 gactaattgtgtaattttgcc 30904705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 2967987 - 2967869
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||    
T  2967987 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggac 2967888  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| |  |||||||||    
T  2967887 taattgtgctattttgcct 2967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 27912216 - 27912094
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  27912216 cataaaaaatgataagatattgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 27912117  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  27912116 ggactaattgtgctattttgcct 27912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 27958635 - 27958513
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  27958635 cataaaaaatgataagatattgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 27958536  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  27958535 ggactaattgtgctattttgcct 27958513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 2968114 - 2968216
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2968114 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2968213  T
Q  183 cct 185  Q
    |||    
T  2968214 cct 2968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 10682288 - 10682402
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||||    
T  10682288 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaataaaggacgaaagtgtttcctaaaataaagttaaggga 10682387  T
Q  166 ctaattgcgtaattt 180  Q
    ||||||| |||||||    
T  10682388 ctaattgtgtaattt 10682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 44379638 - 44379522
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |    
T  44379638 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggatt 44379539  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  44379538 aattgtgtaattttgcc 44379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 17844107 - 17844224
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||| |||||||||    
T  17844107 cataagaaatgataaaatattgtcattttataacataaag-actaaatcgtgacaaaaaataaataaaggacgaaagtgttacctaaaattaagttaagg 17844205  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| |||||||||    
T  17844206 gactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17876014 - 17876116
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17876014 ttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 17876113  T
Q  183 cct 185  Q
    |||    
T  17876114 cct 17876116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27912342 - 27912444
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27912342 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27912441  T
Q  183 cct 185  Q
    |||    
T  27912442 cct 27912444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27958761 - 27958863
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27958761 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27958860  T
Q  183 cct 185  Q
    |||    
T  27958861 cct 27958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 35482946 - 35483048
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35482946 ttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35483045  T
Q  183 cct 185  Q
    |||    
T  35483046 cct 35483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 13327488 - 13327611
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa--gttaa 161  Q
    ||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||        |||||| ||||||||||||||||||||| ||  |||||    
T  13327488 cataaaaaatgataaaatattatcattttatatcataaaggattaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaattaattgttaa 13327587  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||    
T  13327588 gggactaattgcgtaattttgcct 13327611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 3691699 - 3691581
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||| | ||||||||||    
T  3691699 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggac 3691600  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  3691599 taattgtgtaattttgcct 3691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 30904462 - 30904360
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  30904462 ttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 30904363  T
Q  183 cct 185  Q
    |||    
T  30904362 cct 30904360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 23792810 - 23792926
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||| ||||||||||||||||| |||||||||||||    
T  23792810 aaaaatgataaaataatgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaaggacaaaagtgttacctaaaattaagttaagggact 23792908  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| || |||||||||    
T  23792909 aattgtgttattttgcct 23792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 30928541 - 30928658
Alignment:
Q  70 aaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||           |||||||||||||||||||||||||||| ||||||||||||    
T  30928541 aaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggac 30928640  T
Q  167 taattgcgtaattttgcc 184  Q
    |||||| |||||||||||    
T  30928641 taattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 38464760 - 38464641
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||| |||||||||||| || | |||||||||    
T  38464760 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgggac-aaaaaaagataaaggacaaaagtgttacctgaatttaagttaagg 38464662  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||| | ||| |||||||||||    
T  38464661 gacgagttgtgtaattttgcc 38464641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 27523183 - 27523301
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||         |||||||| |||||||||| ||||||| ||||||| ||||    
T  27523183 aaaaattgataagatattgtcattttataacataaaggactaaatcgggacaagaaaaatataaaggatgaaagtgttaactaaaattaagttaaaggac 27523282  T
Q  167 taattgcgtaattttgcct 185  Q
     ||||| ||||||||||||    
T  27523283 gaattgtgtaattttgcct 27523301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 10682161 - 10682060
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10682161 ttgttattttataacataaaggactaaatcgtgactaaaaaa-gataaagaacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 10682063  T
Q  183 cct 185  Q
    |||    
T  10682062 cct 10682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 14577108 - 14577212
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14577108 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 14577207  T
Q  181 tgcct 185  Q
    |||||    
T  14577208 tgcct 14577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 3691830 - 3691932
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||| |||||| |||||| |||||||||    
T  3691830 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagggattaattgtgtaattttg 3691929  T
Q  183 cct 185  Q
    |||    
T  3691930 cct 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20178428 - 20178370
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20178370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 20223226 - 20223098
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||                ||||||||||||||||||||||||||| ||    
T  20223226 cataaaaaatgataaaatagtgtcattttataatataaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaa 20223127  T
Q  157 gttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||| ||||||||||||    
T  20223126 gttaagggactaattgtgtaattttgcct 20223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 4128858 - 4128753
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| || |||| ||||    
T  4128858 aaaaaatgataaaatagtttcattttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggac 4128759  T
Q  167 taattg 172  Q
    ||||||    
T  4128758 taattg 4128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 38464887 - 38464982
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||| |||||||||| |||        |||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||    
T  38464887 attttataacataaaagactaaatcgggacaaaaaaaagataaaggacgaaagtgttacctaaaataaag-taagggatgaattgtgtaattttgcc 38464982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 42123931 - 42124051
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||           |||||| ||||||||||||||||||||| || |||||      
T  42123931 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaagataaatgacgaaagtgttacctaaaattaaattaagaa 42124030  T
Q  165 actaattgcgtaattttgcct 185  Q
    | |||||| ||||||||||||    
T  42124031 attaattgtgtaattttgcct 42124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13327319 - 13327262
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  13327319 ataaaggatgaaagtgttacctaaaattaagttaaggaactaattgtgtaattttgcc 13327262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 14715041 - 14714909
Alignment:
Q  372 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatt-aagaaaattttaca 470  Q
    ||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||| || ||||| | |||    
T  14715041 atagtgaattgagggtaattttatagatttgttgaaggtgttggagattacttggtaattatgtcaccaaactattagattcattaaaaaaaatgtcaca 14714942  T
Q  471 tcaatttaacatatctaataaacatgtttttta 503  Q
    ||||||||| || |||||||| ||||| |||||    
T  14714941 tcaatttaaaatgtctaataagcatgtatttta 14714909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 44379771 - 44379859
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 171  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||| |||||| ||||||||||||| ||||||||| |||||||    
T  44379771 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaatt 44379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 7899877 - 7899830
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgt 114  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7899877 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgt 7899830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 30928370 - 30928315
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||    
T  30928370 ataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 30928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 31231317 - 31231360
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  31231317 aaaaatgataagatattgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 20223394 - 20223452
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  20223394 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 20223452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 21660983 - 21661041
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||    
T  21660983 gataaaggactaaaccgttacctaaaataaagttaagggactaaatgtgtaattttgcc 21661041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 30253882 - 30253940
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||||    
T  30253882 gataaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttgcc 30253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 42123802 - 42123703
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||| ||||| ||        ||||||||| |||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  42123802 ttgttattttataacataaaggactatatcgt-acaaaaaaaagataaaggatgaaaatattatctaaaattaagttaagggactaattgtgtaattttg 42123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 30463972 - 30463929
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  30463972 gataaaggactaaactgttacctaaaataaagttaagggactaa 30463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 34213443 - 34213400
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  34213443 gataaaggaccaaactgttacctaaaataaagttaagggactaa 34213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 28828472 - 28828530
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | |||||||||||    
T  28828472 gataaaggactaaattattacctaaaataaagttaagggactaaaagtgtaattttgcc 28828530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10682244 - 10682212
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  10682244 atgaagatttacgtttgcctatgagtttgatga 10682212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 13795572 - 13795516
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||| ||||||| ||||| ||||||| |||||||||||| ||||| |||||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtgtaattttg 13795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30904545 - 30904513
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30904545 atgaagatttacgtttgcctatgagtttgatga 30904513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35482863 - 35482895
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  35482863 atgaagatttacgtttgcctatgagtttgatga 35482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 37727257 - 37727201
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||  | |||||||||    
T  37727257 gataaaggactaaactgttacctgaaataaagttaagggactaaaagtgtaattttg 37727201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 148351 - 148292
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||  | ||||||||||||    
T  148351 gataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaattttgcct 148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21660784 - 21660725
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21660784 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21660725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 26938441 - 26938496
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||    
T  26938441 ataaaggactaaattgttacctaaaattaagttaagggactaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 27712822 - 27712779
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  27712822 gataaaggactaaactgttacctaaaataaaattaagggactaa 27712779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 33279194 - 33279253
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  33279194 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 33279253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 34632283 - 34632244
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  34632283 gataaaggactaaattgttacctaaaataaagttaaggga 34632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 10925358 - 10925416
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||  ||| || ||||||||||||||||||||||||||  | |||||||||||    
T  10925358 gataaaggattaaattgatacctaaaataaagttaagggactaaaagtgtaattttgcc 10925416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 27713020 - 27713078
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  27713020 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 27713078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 34199091 - 34199149
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| |  | |||||||||||    
T  34199091 gataaaggaccaaactgttacctaaaattaagttaagggactgaaagtgtaattttgcc 34199149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20223266 - 20223299
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  20223266 atgaagatttacgtttgtctatgagtttgatgaa 20223299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 29596460 - 29596403
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  29596460 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 29596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 39198671 - 39198614
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  39198671 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 39198614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 40834056 - 40833935
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  40834056 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 40833957  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  40833956 gactaattgtgtaattttgcct 40833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 32936431 - 32936551
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  32936431 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 32936530  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  32936531 gactaattgtgtaattttgcc 32936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 20769832 - 20769712
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||    
T  20769832 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagg 20769733  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  20769732 gactaattgtgtaattttgcc 20769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 2094798 - 2094918
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  2094798 cataaaaaatgataagatattgtcattttataatataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 2094897  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  2094898 gactaattgtgtaattttgcc 2094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 30370737 - 30370856
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||    
T  30370737 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagg 30370835  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  30370836 gactaattgtgtaattttgcc 30370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 13600671 - 13600792
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||     
T  13600671 cataaaaaatgataagatattatcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaaga 13600770  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  13600771 gactaattgtgtaattttgcct 13600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 18485885 - 18486006
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  18485885 cataaaaaatgataagatattgtcattttataagataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 18485984  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  18485985 gactaattgtgctattttgcct 18486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 35363218 - 35363336
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  35363218 aaaactgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggac 35363317  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  35363318 taattgtgtaattttgcct 35363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 7145658 - 7145532
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-----nnnnnnnngataaaggacgaaagtgttacctaaaataaagt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||    
T  7145658 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagt 7145559  T
Q  159 taagggactaattgcgtaattttgcct 185  Q
    |||||||||||||| || |||||||||    
T  7145558 taagggactaattgtgttattttgcct 7145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 19558102 - 19558218
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| |||||||||||||    
T  19558102 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggact 19558201  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  19558202 aattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3539822 - 3539942
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||| |     
T  3539822 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattatga 3539920  T
Q  164 gactaattgcgtaattttgcct 185  Q
    |||||||||  |||||||||||    
T  3539921 gactaattgtataattttgcct 3539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 15179019 - 15179136
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||||||||    
T  15179019 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggact 15179118  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  15179119 aattgtgtaattttgcct 15179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 35362147 - 35362264
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||| |||||||||||| |||||||||||||    
T  35362147 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggact 35362246  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  35362247 aattgtgtaattttgcct 35362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 35363085 - 35362984
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35363085 ttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35362986  T
Q  183 cc 184  Q
    ||    
T  35362985 cc 35362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 27843143 - 27843023
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||    
T  27843143 cataaaaaatgataaaatattgtcattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 27843044  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||  |||||||||||    
T  27843043 gactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 32936307 - 32936205
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  32936307 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgactaattgtgtaattttg 32936208  T
Q  183 cct 185  Q
    |||    
T  32936207 cct 32936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 18485760 - 18485659
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18485760 ttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 18485661  T
Q  183 cc 184  Q
    ||    
T  18485660 cc 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 40834180 - 40834281
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40834180 ttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40834279  T
Q  183 cc 184  Q
    ||    
T  40834280 cc 40834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 2094676 - 2094574
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  2094676 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 2094577  T
Q  183 cct 185  Q
    |||    
T  2094576 cct 2094574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 7145763 - 7145884
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||    
T  7145763 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaag 7145862  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    ||| |||||  |||||||||||    
T  7145863 ggattaattatgtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 30370612 - 30370511
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30370612 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 30370513  T
Q  183 cc 184  Q
    ||    
T  30370512 cc 30370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 13600567 - 13600443
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtta 160  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||    
T  13600567 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggta 13600468  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    | |||||||||| ||||||||||||    
T  13600467 aaggactaattgtgtaattttgcct 13600443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 20769936 - 20770056
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||    
T  20769936 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaa 20770035  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||| |||||||||    
T  20770036 gggactaattgtgtaattttg 20770056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 25363131 - 25363016
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||||||||    
T  25363131 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaatgacgaaagtgttacctaaaattaagttaagggact 25363033  T
Q  168 aattgcgtaattttgcc 184  Q
      ||| |||||||||||    
T  25363032 gtttgtgtaattttgcc 25363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 132278 - 132393
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||  |||||||||  |||    
T  132278 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaa--aaagttaagtaact 132375  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| | ||||||||||    
T  132376 aattgtgcaattttgcct 132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 32994376 - 32994501
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--------gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||                |||||||||||||||||||||||||||| |||||    
T  32994376 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagtt 32994475  T
Q  160 aagggactaattgcgtaattttgcct 185  Q
    ||||||||||||| ||||||||||||    
T  32994476 aagggactaattgtgtaattttgcct 32994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 20339214 - 20339155
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 20339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 37093738 - 37093790
Alignment:
Q  133 gacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37093738 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 25363260 - 25363362
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| || |||||| |||||||| |||||||||    
T  25363260 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaaggaactaattgtgtaattttg 25363359  T
Q  183 cct 185  Q
    |||    
T  25363360 cct 25363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 14274356 - 14274308
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14274356 cataaaaaataataagatattgtcattttataacataaaggactaaatc 14274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 3539699 - 3539600
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| |||||||||||||||||||||||| |||||         |||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||    
T  3539699 ttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtataatttt 3539600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 15178890 - 15178789
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||| ||        |||||||||||||| | ||| ||||||| ||||||| |||||||| |||||||||||    
T  15178890 ttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaaggactaatcgcgtaattttg 15178791  T
Q  183 cc 184  Q
    ||    
T  15178790 cc 15178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 3294443 - 3294396
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  3294443 cataaaaaataataagatattatcattttataacataaaggactaaat 3294396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 42858555 - 42858598
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  42858555 aaaaatgataagatattgacattttataacataaaggactaaat 42858598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 38981786 - 38981884
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||| ||||||| | ||||||||||||||||||| ||||||||||| ||         ||| |||||||||||||||||||||||| || |||||    
T  38981786 cataaaaattgataaggtgttgtcattttataacataagggactaaatcgagatgaaaaaaagatgaaggacgaaagtgttacctaaaattaaattaag 38981884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 385 - 494
Target Start/End: Complemental strand, 24541527 - 24541419
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatat 484  Q
    |||||||||||||  || || |||||||| ||||||||| ||||||||||||    |||| ||||||||||||| ||||| | |||||||||| | || |    
T  24541527 ggtaattttataacattattgaaggagttggagattactggataattatgctaccaaaattttagactcattaa-aaaatgtcacatcaattttaaatgt 24541429  T
Q  485 ctaataaaca 494  Q
    ||||||||||    
T  24541428 ctaataaaca 24541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 33569028 - 33568984
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  33569028 aaaaatgataagatattgtcattttataacataaatgattaaatc 33568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 132103 - 132048
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||| ||||||||    
T  132103 gataaaggacgaaaatgttacctaaaattaaattaagggattaattgtgtaatttt 132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 24541449 - 24541363
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 280  Q
    |||||||| | ||| |||||||||||| |   ||| ||||| |||||||||||||||||  |||||| ||||| |||||||||||||    
T  24541449 tgtcacatcaattttaaatgtctaataaacaagtattttgtaaactcaacataacacatacatttttccattggtagatcccaccaa 24541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 38015340 - 38015442
Alignment:
Q  400 ttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgttt 499  Q
    ||||| |||||||| || |||| | |||||||||||| |  ||||| |||| ||||||| ||||| | |||||||||||| || ||||||||| |||| |    
T  38015340 ttgttgaaggagttggaaattattggataattatgctatcaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaataaatatgtat 38015439  T
Q  500 ttt 502  Q
    |||    
T  38015440 ttt 38015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 27342885 - 27342930
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||    
T  27342885 aaaaaatgataaggtatcgccattttataacataaaggactaaatc 27342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35363168 - 35363135
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  35363168 atgaagatttacgtttgcctatgagtttgatgaa 35363135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18485844 - 18485812
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  18485844 atgaagatttacgtttgcctatgagtttgatga 18485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30370695 - 30370663
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30370695 atgaagatttacgtttgcctatgagtttgatga 30370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32936390 - 32936358
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32936390 atgaagatttacgtttgcctatgagtttgatga 32936358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40834097 - 40834129
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  40834097 atgaagatttacgtttgcctatgagtttgatga 40834129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1643597 - 1643538
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1643597 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1643538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 2467117 - 2467074
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  2467117 gataaaggaccaaactgttacctaaaattaagttaagggactaa 2467074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 436
Target Start/End: Original strand, 9012263 - 9012314
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgct 436  Q
    ||||||||||| |||||||| || ||||| ||||||||||| ||||||||||    
T  9012263 ggtaattttatgaatttgttgaaagagttggagattactaggtaattatgct 9012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 16736859 - 16736800
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  16736859 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 16736800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 19850516 - 19850559
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||    
T  19850516 aaaaatgagaaggtattgtaattttataacataaaggactaaat 19850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 24858461 - 24858418
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  24858461 gataaaggaccaaactgttacctaaaattaagttaagggactaa 24858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40952125 - 40952066
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  40952125 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 40952066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 2426287 - 2426229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  2426287 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 2426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 14871792 - 14871734
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14871792 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14871734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 19131126 - 19131184
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  19131126 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 19131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 33429789 - 33429847
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  33429789 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 33429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39589673 - 39589615
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39589673 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2094757 - 2094724
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  2094757 atgaagatttacgtttgcctacgagtttgatgaa 2094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3539781 - 3539748
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  3539781 atgaagatttatgtttgcctatgagtttgatgaa 3539748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23163505 - 23163626
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  23163505 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 23163604  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  23163605 gactaattgtgtaattttgcct 23163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49621559 - 49621438
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  49621559 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 49621460  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  49621459 gactaattgtgtaattttgcct 49621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 26202642 - 26202522
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  26202642 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 26202543  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  26202542 gactaattgtgtaattttgcc 26202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 33692382 - 33692262
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  33692382 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 33692283  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  33692282 gactaattgtgtaattttgcc 33692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 50161342 - 50161460
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  50161342 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 50161441  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| |||||||||    
T  50161442 gactaattgtgtaattttg 50161460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 28458747 - 28458867
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||    
T  28458747 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagg 28458846  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  28458847 gactaattgtgtaattttgcc 28458867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 9526034 - 9526155
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  9526034 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 9526133  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  9526134 gactaattgtgttattttgcct 9526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 48419442 - 48419563
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  48419442 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 48419541  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  48419542 gactaattgtgttattttgcct 48419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 21053521 - 21053642
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||        ||||||||| ||||||||||||||||||||||||||||    
T  21053521 cataaaaaatgataagatattgtcattttataatataaaggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 21053620  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  21053621 gactaattgtgtaattttgcct 21053642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 42857027 - 42857147
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  42857027 cataaaaaatgataagatattgcaattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagg 42857126  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  42857127 gactaattgtgtaattttgcc 42857147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 37872889 - 37872767
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||||    
T  37872889 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 37872790  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    ||||||||||| |||||||||||    
T  37872789 gggactaattgtgtaattttgcc 37872767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 41689511 - 41689389
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||    
T  41689511 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 41689412  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    ||||||||||| |||||||||||    
T  41689411 gggactaattgtgtaattttgcc 41689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 3546609 - 3546490
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga-cnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |||||||||| ||||||||||||||||||||||||||    
T  3546609 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaag 3546510  T
Q  163 ggactaattgcgtaattttg 182  Q
    |||||||||  |||||||||    
T  3546509 ggactaattatgtaattttg 3546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 5260313 - 5260206
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  5260313 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 5260215  T
Q  164 gactaattg 172  Q
    |||||||||    
T  5260214 gactaattg 5260206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 55140317 - 55140198
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  55140317 cataaaaaatgataagatattgtcattttataaaataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 55140219  T
Q  164 gactaattgcgtaattttgcc 184  Q
    || |||| | |||||||||||    
T  55140218 gattaatcgtgtaattttgcc 55140198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 20931202 - 20931324
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||    
T  20931202 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaag 20931301  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    | |||||| | ||||||||||||    
T  20931302 gaactaatcgtgtaattttgcct 20931324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21707830 - 21707948
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||| |||||||| |||||||||||||||||||| ||    
T  21707830 taaaaaatgataagatattgtcatttaataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagaga 21707929  T
Q  166 ctaattgcgtaattttgcc 184  Q
    ||||||| |||||||||||    
T  21707930 ctaattgtgtaattttgcc 21707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 13294723 - 13294614
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||    
T  13294723 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacataaaataaagttaag 13294624  T
Q  163 ggactaattg 172  Q
    ||||||||||    
T  13294623 ggactaattg 13294614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 33369628 - 33369508
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||          || ||||||||||||||||||||||||||||||||||||    
T  33369628 aaaaaatgataagatattgtcattttataacataaatgactaaatcgtgacaaaaaaaaaagaaaaaggacgaaagtgttacctaaaataaagttaaggg 33369529  T
Q  165 actaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||    
T  33369528 actaattgtgtaattttgcct 33369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 46143496 - 46143617
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  46143496 cataaaaaatgataaaatattatcattttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagg 46143595  T
Q  164 gactaattgcgtaattttgcct 185  Q
     |||||||| ||||||||||||    
T  46143596 cactaattgtgtaattttgcct 46143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 52690321 - 52690443
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||          ||||||||||||||||||||||||||||||||||||    
T  52690321 cataaaaaatgataagatattgtcattttataacataaacgactaaatcgtaaccaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 52690420  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    | ||||||||| |||||||||||    
T  52690421 gagactaattgtgtaattttgcc 52690443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 13294847 - 13294949
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13294847 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 13294946  T
Q  183 cct 185  Q
    |||    
T  13294947 cct 13294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 49621682 - 49621784
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49621682 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621781  T
Q  183 cct 185  Q
    |||    
T  49621782 cct 49621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 23163382 - 23163281
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23163382 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23163283  T
Q  183 cc 184  Q
    ||    
T  23163282 cc 23163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 20931079 - 20930974
Alignment:
Q  80 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 179  Q
    ||||||| ||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20931079 atattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatt 20930980  T
Q  180 ttgcct 185  Q
    ||||||    
T  20930979 ttgcct 20930974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 33369736 - 33369854
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |||||||    
T  33369736 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaag 33369835  T
Q  163 ggactaattgcgtaatttt 181  Q
     ||||||||| ||||||||    
T  33369836 agactaattgtgtaatttt 33369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 25297798 - 25297679
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||    
T  25297798 aaaaatgataaaattgtgtcattttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaggga 25297699  T
Q  166 ctaattgcgtaattttgcct 185  Q
    ||||||| ||||||||||||    
T  25297698 ctaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 9525929 - 9525805
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaa---ggacgaaagtgttacctaaaataaagtt 159  Q
    |||||||||||||||  || |||| ||||||||||||||| ||||||||||||||        ||||||   ||||||||||||||||||||||||||||    
T  9525929 cataaaaaatgataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagtt 9525830  T
Q  160 aagggactaattgcgtaattttgcc 184  Q
    ||||||||||||| |||||||||||    
T  9525829 aagggactaattgtgtaattttgcc 9525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 42856924 - 42856803
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||| |||||    
T  42856924 cataaaaaatgataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattaag 42856826  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||    
T  42856825 ggactaattgtgtaattttgcct 42856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 50161218 - 50161118
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50161218 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 50161119  T
Q  181 t 181  Q
    |    
T  50161118 t 50161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 28458643 - 28458523
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||    
T  28458643 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaa 28458544  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||| |||||||||    
T  28458543 gggactaattgtgtaattttg 28458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 46143373 - 46143273
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  46143373 ttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttg 46143274  T
Q  183 c 183  Q
    |    
T  46143273 c 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30055326 - 30055208
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnnga--taaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||         |  |||||||| ||||||||||||||||| |||||||||||    
T  30055326 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaataaaataaaggacaaaagtgttacctaaaattaagttaaggga 30055227  T
Q  166 ctaattgcgtaattttgcc 184  Q
    ||||||| |||||||||||    
T  30055226 ctaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23549723 - 23549847
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagtta 160  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||           |||||||||||||||| ||| ||||||||||||||    
T  23549723 cataaaaaatgatgagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaaaaagataaaggacgaaagtattatctaaaataaagtta 23549822  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    ||| |||||| |  |||||||||||    
T  23549823 aggaactaatcgtataattttgcct 23549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 55742852 - 55742954
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||         ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  55742852 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaaaggactaattgtgtaattttg 55742951  T
Q  183 cct 185  Q
    |||    
T  55742952 cct 55742954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 33692507 - 33692608
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  33692507 ttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttg 33692605  T
Q  183 cct 185  Q
    |||    
T  33692606 cct 33692608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 2686097 - 2685985
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||| ||         | ||| ||||||||||||||||||||| |||||||||||||    
T  2686097 aaaaatgataaaatagcgtcattttataacataaaggactaaatcgttacaaaaa----aaaaaagacgaaagtgttacctaaaattaagttaagggact 2686002  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  2686001 aattgtgtaattttgcc 2685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 37873007 - 37873109
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||| | ||||||||||||||||||||||||   ||||||||    
T  37873007 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaagggactaattatataattttg 37873106  T
Q  183 cct 185  Q
    |||    
T  37873107 cct 37873109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3546713 - 3546837
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtta 160  Q
    |||||||||||||||  || |||| |||||||||||||||||||||||| |||||          |||||| ||||||||||||||||||||||||||||    
T  3546713 cataaaaaatgataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaagataaatgacgaaagtgttacctaaaataaagtta 3546812  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    ||  |||||||| ||||||||||||    
T  3546813 agaaactaattgtgtaattttgcct 3546837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 52690196 - 52690095
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||    
T  52690196 ttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatattacctaaaataaagttaagcgactaattgtgtaattttg 52690098  T
Q  183 cct 185  Q
    |||    
T  52690097 cct 52690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 30799350 - 30799295
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 55742723 - 55742621
Alignment:
Q  82 attgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    ||||||||||||||| |||||||||||||||||||          ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  55742723 attgtcattttataatataaaggactaaatcgtgataaaaaaaaagataa-ggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattt 55742625  T
Q  181 tgcc 184  Q
    ||||    
T  55742624 tgcc 55742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 30799611 - 30799668
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  30799611 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 37531594 - 37531723
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  37531594 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 37531693  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  37531694 atttaaaatgtctaataagcatgtatttta 37531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 30055494 - 30055550
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  30055494 aaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 30055550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 5260437 - 5260538
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| || |||||| ||||        |||||||||||||| |||||||||||||||||||||  ||||||||  |||||||||    
T  5260437 ttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagactaattatgtaattttg 5260536  T
Q  183 cc 184  Q
    ||    
T  5260537 cc 5260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 22335554 - 22335454
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||         |||||| |||||||||||||||| |||| |||||||||    
T  22335554 cataaaaaatgagaagatattgtcattttataacgtaaaggaataaatcg-gaacacaaaaagataaaagacgaaagtgttacctgaaattaagttaagg 22335456  T
Q  164 ga 165  Q
    ||    
T  22335455 ga 22335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 23549560 - 23549473
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 170  Q
    |||| ||||||||||||| ||||||||||||| ||        |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  23549560 ttgttattttataacatagaggactaaatcgtaacaaaaaaaagataaaagactaaagtattacctaaaataaagttaagggactaat 23549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32488642 - 32488583
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  32488642 gataaaggactaaattgttacctaaaataaagttaagggactaaaagtgtaattttgcct 32488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 50158637 - 50158506
Alignment:
Q  372 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacat 471  Q
    |||||||||| | |||||||||||||||||||| |||  ||| ||||||||| |  |||||||      |||||||| | ||||||| ||||| | ||||    
T  50158637 atagtgaattaatggtaattttataaatttgttgaagatgttggagattactgggcaattatgtcaccaaaatattaaattcattaaaaaaatgtcacat 50158538  T
Q  472 caatttaacatatctaataaacatgtttttta 503  Q
    |||||||| || |||||||||||||| |||||    
T  50158537 caatttaaaatgtctaataaacatgtatttta 50158506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 30799437 - 30799391
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgt 114  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  30799437 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgt 30799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 41689636 - 41689734
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||| |||| || ||        |||||||||||||| | |||| ||||||||||||||||| ||||||| ||||||||    
T  41689636 ttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaaggggctaattgtgtaatttt 41689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 50977677 - 50977723
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||    
T  50977677 cataaaaaatgatacgatattgtcattttataatataaaggactaaa 50977723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 53232328 - 53232372
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  53232328 aaaaataataagatattgtcattttataatataaaggactaaatc 53232372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 55140485 - 55140541
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    ||||||||||||||| |||| |||||||||||||| ||| |||||| ||||||||||    
T  55140485 ataaaggacgaaagtattacttaaaataaagttaaaggattaattgtgtaattttgc 55140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 21053399 - 21053329
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaat 153  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| ||| |||||||||||||    
T  21053399 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaaatgttacctaaaat 21053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 25297969 - 25298023
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||| |||| |||||| |||||| |||||||||||||||||| ||||||||    
T  25297969 ataaaggatgaaaatgttacttaaaattaagttaagggactaattgtgtaatttt 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3546650 - 3546683
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3546650 atgaagatttacgtttgcctatgagtttgatgaa 3546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9525993 - 9525961
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  9525993 atgaagatttacgtttgcctatgagtttgatga 9525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20931161 - 20931129
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  20931161 atgaagatttacgtttgcctatgagtttgatga 20931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21707787 - 21707755
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  21707787 atgaagatttacgtttgcctatgagtttgatga 21707755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23163464 - 23163432
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  23163464 atgaagatttacgtttgcctatgagtttgatga 23163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 23963107 - 23963147
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  23963107 aaaggacgaaattgttacctaaaattaagttaagggactaa 23963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33369673 - 33369705
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  33369673 atgaagatttacgtttgcctatgagtttgatga 33369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41689553 - 41689585
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  41689553 atgaagatttacgtttgcctatgagtttgatga 41689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42856986 - 42856954
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  42856986 atgaagatttacgtttgcctatgagtttgatga 42856954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48419401 - 48419369
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  48419401 atgaagatttacgtttgcctatgagtttgatga 48419369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49621600 - 49621632
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  49621600 atgaagatttacgtttgcctatgagtttgatga 49621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55742769 - 55742801
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  55742769 atgaagatttacgtttgcctatgagtttgatga 55742801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9902711 - 9902652
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9902711 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10993683 - 10993624
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  10993683 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 10993624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 20983972 - 20983913
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||  | ||||||||||||    
T  20983972 gataaaggactaaattattacctaaaataaagttaagggaccaaaagtgtaattttgcct 20983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20984170 - 20984229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  20984170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 20984229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 32922323 - 32922382
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  32922323 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 32922382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 42728384 - 42728442
Alignment:
Q  227 tactttgtgaactcaacataacaca--tgtattttttcattgttagatcccaccaagga 283  Q
    |||||||| ||||||||||||||||  ||||||||| |||||  |||||||||||||||    
T  42728384 tactttgttaactcaacataacacatttgtatttttccattgacagatcccaccaagga 42728442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 52654188 - 52654247
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  52654188 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 52654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 21360515 - 21360457
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  21360515 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 21360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 45655948 - 45656006
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||| ||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 45656006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 52538135 - 52538193
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52538135 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52538193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 52653989 - 52653931
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52653989 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 563721 - 563765
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||    
T  563721 aaaaatgacaagatattg-cattttataacacaaaggactaaatcg 563765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 9644808 - 9644767
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  9644808 taaaggaccaaattgttacctaaaattaagttaagggactaa 9644767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 17872437 - 17872388
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||| ||||||| | ||||||||||||| ||||||||||| |||||    
T  17872437 cataaaaattgataaggtgttgtcattttatagcataaaggactcaatcg 17872388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21053480 - 21053447
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  21053480 atgaagatttacgtttgcctacgagtttgatgaa 21053447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 22192611 - 22192582
Alignment:
Q  367 atagcatagtgaattgagggtaattttata 396  Q
    ||||||||||||||||||||||||||||||    
T  22192611 atagcatagtgaattgagggtaattttata 22192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37872924 - 37872957
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  37872924 atgaagatttacgtttgcctacgagtttgatgaa 37872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 43914640 - 43914676
Alignment:
Q  75 ataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||||||||||||||||||||||||| |||||||||    
T  43914640 ataagatattgtcattttataacataaa-gactaaatc 43914676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 22316840 - 22316719
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  22316840 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 22316741  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  22316740 gactaattgtgtaattttgcct 22316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 36229883 - 36229766
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  36229883 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 36229784  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  36229783 gactaattgtgtaatttt 36229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 37513211 - 37513090
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  37513211 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagg 37513112  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  37513111 gactaattgtgttattttgcct 37513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 25847565 - 25847444
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||| ||||||    
T  25847565 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagg 25847466  T
Q  164 gactaattgcgtaattttgcct 185  Q
    |||||||||  |||||||||||    
T  25847465 gactaattgtataattttgcct 25847444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 28829872 - 28829753
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |    
T  28829872 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaaag 28829774  T
Q  164 gactaattgcgtaattttgcc 184  Q
     |||||||| |||||||||||    
T  28829773 aactaattgtgtaattttgcc 28829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 8852030 - 8852152
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  8852030 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 8852129  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  8852130 ggactaattgtgctattttgcct 8852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 22975465 - 22975344
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||| |||||||||||||||||||||||    
T  22975465 cataaaaaataataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagg 22975366  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  22975365 gactaattgtgtaattttgcct 22975344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 48434027 - 48434147
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  48434027 cataaaaaatgataagctattgtcattttataacataaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaag 48434126  T
Q  163 ggactaattgcgtaattttgc 183  Q
    |||||||||| ||||||||||    
T  48434127 ggactaattgtgtaattttgc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 49984936 - 49985038
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||    
T  49984936 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagg 49985035  T
Q  164 gac 166  Q
    |||    
T  49985036 gac 49985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 23043414 - 23043535
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||||||||     
T  23043414 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaa 23043513  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||    
T  23043514 ggactaattgtgtaattttgcc 23043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49621098 - 49620977
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||  |    
T  49621098 cataaaaaatgatgagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttagag 49620999  T
Q  164 gactaattgcgtaattttgcct 185  Q
    || |||| | ||||||||||||    
T  49620998 gattaatcgtgtaattttgcct 49620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 8851905 - 8851803
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8851905 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 8851806  T
Q  183 cct 185  Q
    |||    
T  8851805 cct 8851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 25847669 - 25847791
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||    
T  25847669 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaag 25847768  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||    
T  25847769 ggactaattgtgtaattttgcct 25847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 37513340 - 37513436
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37513340 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 37513436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 22316964 - 22317065
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  22316964 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatcgtgtaattttg 22317063  T
Q  183 cc 184  Q
    ||    
T  22317064 cc 22317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 44506162 - 44506049
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |    
T  44506162 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggatt 44506063  T
Q  168 aattgcgtaatttt 181  Q
    ||||| ||||||||    
T  44506062 aattgtgtaatttt 44506049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 17574492 - 17574372
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| ||||||| |    
T  17574492 cataaaaaatgataaaatattgtaattttataacataaaggactaaatcgtaacaaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaatg 17574394  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||| ||||| ||||||||||||    
T  17574393 gacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 49621223 - 49621324
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||| ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49621223 ttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621322  T
Q  183 cc 184  Q
    ||    
T  49621323 cc 49621324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 11121526 - 11121626
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11121526 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 11121625  T
Q  182 g 182  Q
    |    
T  11121626 g 11121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 55009217 - 55009121
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  55009217 cataaaaaatgattagatattgttattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 55009121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 22975589 - 22975688
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22975589 ttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 22975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 49711626 - 49711743
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||         |||| ||||||||||||||||||||||||||||||||    
T  49711626 cataaaaaatgataagatattgtcattt-ataacaaaaaggactaaattgtgacaaaaaaaa-ataacggacgaaagtgttacctaaaataaagttaagg 49711723  T
Q  164 gactaattgcgtaattttgc 183  Q
    ||||||||  ||||||||||    
T  49711724 gactaattatgtaattttgc 49711743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 48433901 - 48433801
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48433901 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 48433802  T
Q  181 t 181  Q
    |    
T  48433801 t 48433801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 28829996 - 28830099
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||| ||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  28829996 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaatttt 28830095  T
Q  182 gcct 185  Q
    ||||    
T  28830096 gcct 28830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 36230007 - 36230106
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36230007 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaatttt 36230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 49711501 - 49711400
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| |||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  49711501 ttgttattttataacataaatgactaaatcgtga-taaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49711403  T
Q  183 cct 185  Q
    |||    
T  49711402 cct 49711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 11121405 - 11121282
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngata--aaggacgaaagtgttacctaaaataaagttaa 161  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||| ||||||         |||  ||||||||||||||| ||||||||||||||||    
T  11121405 cataaaaattgataagatattgtcattttataacatttaggactaaaccgtgacaaaaaaaaaatataaaggacgaaagtgttgcctaaaataaagttaa 11121306  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||||||||||| |  |||||||||    
T  11121305 gggactaattgtgctattttgcct 11121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 9296440 - 9296382
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  9296440 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtagttttgcct 9296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 33491692 - 33491750
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 33491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 44506288 - 44506389
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  44506288 ttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttg 44506387  T
Q  183 cc 184  Q
    ||    
T  44506388 cc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 55009386 - 55009442
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  55009386 gataaaggacgaaagtgttacttaaaataaagttaagggactaattgtgtaattttg 55009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 3612697 - 3612598
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||| ||         | |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  3612697 ttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaatttt 3612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 9296607 - 9296650
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggact 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9296607 cataaaaaatgataagatattgtcattttataacataaaggact 9296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 33491660 - 33491601
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||    
T  33491660 gataaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgcct 33491601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 23043241 - 23043186
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  23043241 gataaaggacgaaagtgttacctaaagtaaagttatgggacttattgtgtaatttt 23043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 35850875 - 35850994
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||| |||        ||| ||| |||||||||||||||||||| || ||||      
T  35850875 cataaaaagtgataaggtattgtcattttataacataaaagactaaatcgggac-aaaaaaagatgaagaacgaaagtgttacctaaaattaaattaaaa 35850973  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||| ||||  |||||||||||    
T  35850974 gacgaattatgtaattttgcc 35850994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 1342002 - 1341957
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  1342002 aaaaatgataagatattgtcattttaaaacataaaggaataaatcg 1341957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 10687880 - 10687936
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  10687880 gataaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaattttg 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2862759 - 2862700
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  2862759 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 2862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 12012829 - 12012782
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  12012829 cataaaaaatgataaaatattgacattttataacataaaagactaaat 12012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41944132 - 41944191
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | ||||||||||||    
T  41944132 gataaaggactaaactattacctaaaataaagttaagggactaaaagtgtaattttgcct 41944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 3612826 - 3612938
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| | |||||||||||||||||||||||||| || |         ||||||| |||||||||||||||||| | ||||||   |||    
T  3612826 aaaaaatgataaaatagtttcattttataacataaaggactaaattgtta--aaaaaaagataaagaacgaaagtgttacctaaagttaagttacaagac 3612923  T
Q  167 taattgcgtaatttt 181  Q
    |||||| ||||||||    
T  3612924 taattgtgtaatttt 3612938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39930691 - 39930633
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||| ||||    
T  39930691 gataaaggactaaagtgttacctaaaattaagttaaaggacgaattgtgtaattatgcc 39930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 43006987 - 43007029
Alignment:
Q  69 aaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  43006987 aaaatgataagatattgtcattttataacataaaaaactaaat 43007029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49711584 - 49711551
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  49711584 atgaagatttacgtttgcctatgagtttgatgaa 49711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8851989 - 8851957
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  8851989 atgaagatttacgtttgcctatgagtttgatga 8851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25847606 - 25847638
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  25847606 atgaagatttacgtttgcctatgagtttgatga 25847638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49621139 - 49621171
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  49621139 atgaagatttacgtttgcctatgagtttgatga 49621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 1342180 - 1342235
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||||||||||| ||| || |||||||||||  ||||| ||||||||    
T  1342180 gataaaggacgaaagtgttacttaatattaagttaagggataaattgtgtaatttt 1342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 29196031 - 29195980
Alignment:
Q  229 ctttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 280  Q
    |||||| ||||||  | |||||||| ||||||||||||||||||||||||||    
T  29196031 ctttgtcaactcattaaaacacatgcattttttcattgttagatcccaccaa 29195980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 31574509 - 31574568
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  31574509 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 31574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 50711251 - 50711310
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  50711251 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 50711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 11221050 - 11220992
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  11221050 gataaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 11220992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 14463379 - 14463437
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14463379 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14463437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 20209208 - 20209150
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  20209208 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 20209150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 44664679 - 44664621
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44664679 gataaaggactaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 51000699 - 51000641
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| ||| |||||||||  |||||||||||||||    
T  51000699 gataaaggactaaaacgttacctaaaattaagataagggactgtttgcgtaattttgcc 51000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 7603619 - 7603660
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaagga 105  Q
    ||||||| |||||||||||||| |||||||||| ||||||||    
T  7603619 cataaaatatgataagatattgacattttataatataaagga 7603660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22975506 - 22975539
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  22975506 atgaagatttacgtttgcctacgagtttgatgaa 22975539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 34333775 - 34333730
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||| ||||||| |||||||||||||||| || |||||||    
T  34333775 aaaaatgatatgatattgacattttataacataaaagattaaatcg 34333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 9320028 - 9320149
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  9320028 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 9320127  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  9320128 gactaattgtgtaattttgcct 9320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 18916745 - 18916624
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  18916745 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 18916646  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  18916645 gactaattgtgtaattttgcct 18916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 17846128 - 17846007
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  17846128 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 17846029  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  17846028 gactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 44536410 - 44536527
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  44536410 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 44536509  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  44536510 gactaattgtgtaatttt 44536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 10044865 - 10044745
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||    
T  10044865 cataaaaaatgataagatattgtcattttataacataaatgactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 10044766  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  10044765 gactaattgtgtaattttgcc 10044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 20364196 - 20364316
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| |    
T  20364196 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaag 20364295  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  20364296 gactaattgtgtaattttgcc 20364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 4261273 - 4261156
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||| ||||||    
T  4261273 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagg 4261174  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  4261173 gactaattgtgtaatttt 4261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 10108934 - 10108813
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  10108934 cataaaaaatgataagatattgtcattttataacataaatgactaaatcgtgacaaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaag 10108835  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||    
T  10108834 ggactaattgtgtaattttgcc 10108813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 2318612 - 2318505
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  2318612 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagg 2318514  T
Q  164 gactaattg 172  Q
    |||||||||    
T  2318513 gactaattg 2318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 8322411 - 8322529
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||| ||||||||||    
T  8322411 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga--aaaaaaagataaaggacgaaaatgttacctaaaattaagttaaggg 8322508  T
Q  165 actaattgcgtaattttgcct 185  Q
    || ||||  ||||||||||||    
T  8322509 acgaattctgtaattttgcct 8322529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27360366 - 27360468
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27360366 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 27360465  T
Q  183 cct 185  Q
    |||    
T  27360466 cct 27360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30337540 - 30337424
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||| |||||    
T  30337540 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggact 30337441  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  30337440 aattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 9319903 - 9319804
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9319903 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtagttttg 9319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17846252 - 17846354
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17846252 ttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtataattttg 17846351  T
Q  183 cct 185  Q
    |||    
T  17846352 cct 17846354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 18916869 - 18916971
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18916869 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattatgtaattttg 18916968  T
Q  183 cct 185  Q
    |||    
T  18916969 cct 18916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 27360239 - 27360118
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngata--aaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||         |||  |||||||||| | |||||||||||||||||||||    
T  27360239 taaaaaatgataagatattgtcatttaataacataaaggactaaattgtgacaaaaaaaaaatataaaggacgaaaatattacctaaaataaagttaagg 27360140  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  27360139 gactaattgtgtaattttgcct 27360118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 2318735 - 2318836
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2318735 ttgttattttataacataaaagactaaatcgtgacaaaagaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2318833  T
Q  183 cct 185  Q
    |||    
T  2318834 cct 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 20364071 - 20363970
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  20364071 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttg 20363972  T
Q  183 cc 184  Q
    ||    
T  20363971 cc 20363970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 601449 - 601327
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagtt-aa 161  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||         |||||||||||||||||||||||||||||||||| ||    
T  601449 cataaaaaatgataagatattgtcattttatattataaaagactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaa 601350  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    | || |||||| |||||||||||    
T  601349 gagattaattgtgtaattttgcc 601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 10109039 - 10109160
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||    
T  10109039 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaatataaaggacgaaagtgttaactaaaataaagttaa 10109138  T
Q  162 gggactaattgcgtaattttgc 183  Q
    |||||||| |||||||||||||    
T  10109139 gggactaagtgcgtaattttgc 10109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 4261377 - 4261502
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    |||||||||||||||  || |||| ||||||||||||| ||||||||||||||||           ||||||||||||||||||||||||||||||||||    
T  4261377 cataaaaaatgataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagtt 4261476  T
Q  160 aagggactaattgcgtaattttgcct 185  Q
    || |||||||||| ||||||||||||    
T  4261477 aacggactaattgtgtaattttgcct 4261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 601620 - 601679
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  601620 gataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 601679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 5547339 - 5547393
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5547339 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 10045035 - 10045092
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10045035 gataaaggacgaaagtgttaactaaaa-aaagttaagggactaattgcgtaattttgcc 10045092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 13862608 - 13862496
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    |||||||| || |||||||||||||||||||||||||||||| ||| |||        |||||||||||||||| |||| |||||| ||||||| ||||     
T  13862608 aaaaatgaaaaaatattgtcattttataacataaaggactaattcgagac-aaaaaaagataaaggacgaaagtattacttaaaattaagttaaaggacg 13862510  T
Q  168 aattgcgtaatttt 181  Q
    ||||| ||||||||    
T  13862509 aattgtgtaatttt 13862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 37084734 - 37084688
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37084734 aaaaaatgataagatattgtcattttataacataaatgactaaatcg 37084688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 18178377 - 18178434
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  18178377 ataaaggacgaaagtattacctaatataaagttaaaggactaattgtgtaattttgcc 18178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 20117767 - 20117722
Alignment:
Q  617 atttagcactcaataagaattattccaaactttggcacttcttatc 662  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20117767 atttagcactcaataagaaatattccaaactttggcacttcttatc 20117722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 44536237 - 44536178
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| | ||| ||||||    
T  44536237 gataaaggacggaagtgttacctaaaataaagttaaaggactaattgtgcaatattgcct 44536178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31769839 - 31769781
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  31769839 ataaaggactaaagtattacctaaaattaagttaagagacgaattgcgtaattttgcct 31769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 10520907 - 10520866
Alignment:
Q  70 aaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  10520907 aaatgataagatattgtcattttataatataaaggactaaat 10520866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 9991968 - 9991921
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  9991968 cataaaaaatgataaaatattgtcattttagaatataaaggactaaat 9991921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30337716 - 30337775
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||| | ||||| ||||||| |||||||||||||||||  ||||||||||||    
T  30337716 gataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcct 30337775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 10714066 - 10714008
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | |||||||||||    
T  10714066 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcc 10714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 43520401 - 43520439
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggac 106  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  43520401 aaaattgataagatattgtcattttataacataaaggac 43520439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 33274653 - 33274710
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||    
T  33274653 gataaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaattttgc 33274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2318653 - 2318685
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  2318653 atgaagatttacgtttgcctatgagtttgatga 2318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 503
Target Start/End: Original strand, 3395029 - 3395141
Alignment:
Q  391 tttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaata 490  Q
    ||||| |||||||| ||||| ||  | |||| | ||||||||||||    ||||| |||| ||||||| ||||| | |||||||||||| || |||||||    
T  3395029 tttatgaatttgttgaaggaattgaaaattattggataattatgctaccaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaata 3395128  T
Q  491 aacatgtttttta 503  Q
    ||||||| |||||    
T  3395129 aacatgtatttta 3395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18916786 - 18916818
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  18916786 atgaagatttacgtttgcctatgagtttgatga 18916818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20364155 - 20364123
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  20364155 atgaagatttacgtttgcctatgagtttgatga 20364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27360282 - 27360314
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  27360282 atgaagatttacgtttgcctatgagtttgatga 27360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 1650759 - 1650818
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1650759 gataaaggacaaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 5547308 - 5547347
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggac 106  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  5547308 aaaaaatgataaaataatgtcattttataacataaaggac 5547347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 11723763 - 11723720
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  11723763 gataaaggaccaaactgttacctgaaataaagttaagggactaa 11723720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30488336 - 30488395
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  30488336 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 30488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 31770014 - 31770057
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||    
T  31770014 aaaaatgataaaatattgtcattttaaaacatagaggactaaat 31770057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40710374 - 40710315
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| |||| | |||||| |||| |||||||||||| ||||| ||||||||||||    
T  40710374 gataaaggatgaaaatattacctgaaattaagttaagggacgaattgtgtaattttgcct 40710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 981822 - 981780
Alignment:
Q  143 ttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  981822 ttacctaaaattaagttaagggacaaattgtgtaattttgcct 981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 5547145 - 5547103
Alignment:
Q  141 tgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||    
T  5547145 tgttatctaaaattaagttaagggactaattgtgtaattttgc 5547103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 26499479 - 26499421
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  26499479 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 26499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 26499667 - 26499725
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  26499667 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35412133 - 35412191
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  35412133 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 35412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 44769387 - 44769421
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaa 102  Q
    ||||||||||||| |||||||||||||||||||||    
T  44769387 aaaaatgataagaaattgtcattttataacataaa 44769421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 2450146 - 2450109
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  2450146 gataaaggactaaactgttacctaaaataaagttaagg 2450109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 28789123 - 28789180
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  28789123 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 28789180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44536368 - 44536335
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    |||||||||||| |||||||||||||||||||||    
T  44536368 atgaagatttacatttgcctatgagtttgatgaa 44536335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 2026841 - 2026720
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  2026841 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 2026742  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  2026741 gactaattgtgtaattttgcct 2026720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 1549447 - 1549326
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  1549447 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 1549348  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  1549347 gactaattgtgttattttgcct 1549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 17611650 - 17611771
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  17611650 cataaaaaatgataagatattgacattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 17611749  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||  ||||||||||||    
T  17611750 gactaattatgtaattttgcct 17611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 30002435 - 30002552
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  30002435 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 30002533  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| || ||||||    
T  30002534 gactaattgtgttattttg 30002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 30562903 - 30562783
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  30562903 cataaaaaatgataagatattgtcattttataacataaagaaccaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagg 30562805  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  30562804 gactaattgtgttattttgcct 30562783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 40902553 - 40902661
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  40902553 cataaaaaatgataagatattgtcatcttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagg 40902652  T
Q  164 gactaattg 172  Q
    |||||||||    
T  40902653 gactaattg 40902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 12139144 - 12139023
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||| |||||||||||||| |||||     
T  12139144 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaagaacgaaagtattacctaaaataaaattaaga 12139045  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  12139044 gactaattgtgtaattttgcct 12139023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 17985513 - 17985634
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  17985513 cataaaaaatgataagatattgtcattttataatataaaggattaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 17985612  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  17985613 gactaattgtgctattttgcct 17985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 25780115 - 25780231
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||         |||||||||||||||||||||||||||||||||||||    
T  25780115 cataaaaaatgataagatattgtcattttataacataaatgactaaatcatgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagg 25780213  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  25780214 gactaattgtgtaatttt 25780231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 7114089 - 7114208
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||         ||||||||||||||||||| ||||||||||||||| |    
T  7114089 cataaaaaatgataagatattgtcattttataacataaaggactaaattgtgacaaaaaaaa-ataaaggacgaaagtgttatctaaaataaagttaatg 7114187  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  7114188 gactaattgtgtaattttgcc 7114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 40902428 - 40902327
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40902428 ttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40902329  T
Q  183 cc 184  Q
    ||    
T  40902328 cc 40902327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 17611526 - 17611424
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17611526 ttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 17611427  T
Q  183 cct 185  Q
    |||    
T  17611426 cct 17611424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 17985388 - 17985290
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  17985388 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaatttt 17985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 2026964 - 2027065
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2026964 ttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 2027063  T
Q  183 cc 184  Q
    ||    
T  2027064 cc 2027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 7113960 - 7113864
Alignment:
Q  89 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7113960 ttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 12115196 - 12115298
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  12115196 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 12115295  T
Q  183 cct 185  Q
    |||    
T  12115296 cct 12115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 30002312 - 30002214
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  30002312 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggactaattgtgtaatttt 30002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 12139273 - 12139370
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12139273 attttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 12139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 30563027 - 30563130
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30563027 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatcgtgtaatttt 30563126  T
Q  182 gcct 185  Q
    ||||    
T  30563127 gcct 30563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 25780010 - 25779887
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaagt 158  Q
    |||||||||||||||  || |||| |||||||||||||||| |||||||||||||            |||||||||||||||||||| ||||||||||||    
T  25780010 cataaaaaatgataactatgttgttattttataacataaagaactaaatcgtgacaaaaaaaaaaaagataaaggacgaaagtgttatctaaaataaagt 25779911  T
Q  159 taagggactaattgcgtaattttg 182  Q
    |||||||||||||| |||||||||    
T  25779910 taagggactaattgtgtaattttg 25779887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 19897277 - 19897176
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||| ||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  19897277 ttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttg 19897178  T
Q  183 cc 184  Q
    ||    
T  19897177 cc 19897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 19897402 - 19897525
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||| |           ||||||||||||||||||||||||| || |||||||    
T  19897402 cataaaaaatgataaaatagtgtcattttataacataaaggattaaatcgttaaaaaaaaaaaagataaaggacgaaagtgttacctaagattaagttaa 19897501  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||| ||||||  ||||||||||||    
T  19897502 ggggctaattatgtaattttgcct 19897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 4969609 - 4969711
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||| ||| ||||| ||||||| |||||||| ||||||||| |||||||||    
T  4969609 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagtgactaattgtgtaattttg 4969708  T
Q  183 cct 185  Q
    |||    
T  4969709 cct 4969711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 4969481 - 4969380
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||| ||         |||||||||||||||||||||||||||| ||||||| ||||    
T  4969481 aaaaatgataaaatagtgtcatttaataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaaggac 4969382  T
Q  167 ta 168  Q
    ||    
T  4969381 ta 4969380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 12115074 - 12114954
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||| ||| | |||||||||||||||||||| |||||||| ||          ||||||||| |||| ||||||||||||| |||||||    
T  12115074 cataaaaaatgataaaatagtatcattttataacataaaggattaaatcgttacaaaaaaaaaagataaaggatgaaaatgttacctaaaattaagttaa 12114975  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||  |||||||||    
T  12114974 gggactaattatgtaattttg 12114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 503
Target Start/End: Complemental strand, 28962104 - 28961975
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  28962104 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 28962005  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  28962004 atttaaaatgtctaataagcatgtatttta 28961975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  130 aaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 25267441 - 25267499
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| |||||||||| ||||||| |||||||| |||| |||||||||||||||||    
T  25267441 ataaaggatgaaagtgttatctaaaattaagttaagagactgattgcgtaattttgcct 25267499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5586545 - 5586486
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  5586545 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 5586486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 26874483 - 26874526
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  26874483 gataaaggactaaactgttacctaaaataaagttaagggactaa 26874526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 29233745 - 29233686
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||  |||||||||||    
T  29233745 gataaaggacgagagtgttacttaaaataaagttaagagaccaattggataattttgcct 29233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 31089937 - 31090000
Alignment:
Q  441 aaatattagactcattaagaaaatttt-acatcaatttaacatatctaataaacatgtttttta 503  Q
    |||||||||||||||||| |||| | | |||||||||||| ||||||||||||||||| |||||    
T  31089937 aaatattagactcattaaaaaaaatgtcacatcaatttaaaatatctaataaacatgtatttta 31090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 35521463 - 35521522
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  35521463 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 35521522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 45315512 - 45315555
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  45315512 gataaaggactaaattgttacctaaaataaagttaagggactaa 45315555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 34480440 - 34480498
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | |||||||||||    
T  34480440 gataaaggactaaattgttacttaaaataaagttaagggactaaaagtgtaattttgcc 34480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 44066951 - 44066997
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  44066951 ataaaaattgataagatattgacattttataacataaatgactaaat 44066997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 49564243 - 49564185
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||    
T  49564243 gataaaggacaaaagtgttacctgaaattaagttaagagacgaattgtgtaattttgcc 49564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 502
Target Start/End: Complemental strand, 31421163 - 31421019
Alignment:
Q  360 agagtatatag--catagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatta 457  Q
    |||||||||||  |||||||| |||   ||||||||||  ||||| | ||||| |||||||||||||  ||||||||||     ||||||||||||| ||    
T  31421163 agagtatatagaacatagtgagttgcaagtaattttatggatttgctgaaggaattagagattactaagtaattatgctaccacaatattagactcaata 31421064  T
Q  458 agaaaattttacatcaatttaacatatctaataaacatgtttttt 502  Q
    | ||| | |  ||||||||||| || |||||||||||||| ||||    
T  31421063 aaaaattgtcccatcaatttaaaatgtctaataaacatgtatttt 31421019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 47193958 - 47194003
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  47193958 aaaaaagataagatattgtcatttaataacataaaagactaaatcg 47194003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7114048 - 7114016
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  7114048 atgaagatttacgtttgcctatgagtttgatga 7114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17611609 - 17611577
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  17611609 atgaagatttacgtttgcctatgagtttgatga 17611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 25267294 - 25267181
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||||| || ||    ||||||||||| ||        |||||||||||||||||||| ||||||| || ||||||||    
T  25267294 taaaaaatgataagatattgtcattttacaaaat----gactaaatcgtaacaaaaaaa-gataaaggacgaaagtgttatctaaaattaaattaaggga 25267200  T
Q  166 ctaattgcgtaattttgcc 184  Q
     |||||   ||||||||||    
T  25267199 ttaattatataattttgcc 25267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30306896 - 30306852
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||    
T  30306896 aaaaattataagatattgtcattttataatataaaagactaaatc 30306852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30562944 - 30562976
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30562944 atgaagatttacgtttgcctatgagtttgatga 30562976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40902512 - 40902480
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  40902512 atgaagatttacgtttgcctatgagtttgatga 40902480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 49564599 - 49564655
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||| |||||||||||    
T  49564599 aaaggacgaaagtgttacctaaaattaagttaaaaggacaaattgtgtaattttgcc 49564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5618129 - 5618070
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  5618129 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 5618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 6489128 - 6489171
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||    
T  6489128 gataaatgactaaactgttacctaaaataaagttaagggactaa 6489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 25012705 - 25012646
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  |  |||||||||||    
T  25012705 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagattaattttgcct 25012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34480242 - 34480183
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  34480242 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 34480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 2026884 - 2026914
Alignment:
Q  3 gaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||    
T  2026884 gaagatttacgtttgcctatgagtttgatga 2026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 4695192 - 4695250
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  4695192 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 4695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 7349828 - 7349770
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||||||||| || |||| |||||||||||||||  | |||||||||||    
T  7349828 gataaaggaccaaagtgttatctgaaattaagttaagggactaaaagtgtaattttgcc 7349770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8853352 - 8853410
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8853352 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 9172266 - 9172308
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||||||||||||||| ||| |||||| |||||    
T  9172266 aaaaatgataagatattgtcattttagaacttaaagggctaaa 9172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 9180248 - 9180290
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||||||||||||||| ||| |||||| |||||    
T  9180248 aaaaatgataagatattgtcattttagaacttaaagggctaaa 9180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 28554248 - 28554190
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  28554248 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 28554190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30002394 - 30002364
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgat 31  Q
    |||||||||||||||||||||||||||||||    
T  30002394 atgaagatttacgtttgcctatgagtttgat 30002364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 31289312 - 31289254
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  31289312 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 31289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39672894 - 39672836
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39672894 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39672836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 7e-45; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 3922764 - 3922884
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  3922764 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 3922863  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  3922864 gactaattgtgtaattttgcc 3922884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 3218370 - 3218487
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  3218370 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 3218469  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  3218470 aattgtgtaattttgcct 3218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 4243043 - 4242922
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||| |    
T  4243043 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaag 4242944  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  4242943 gactaattgtgtaattttgcct 4242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 33595439 - 33595320
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||||||||||||||    
T  33595439 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagg 33595340  T
Q  164 gactaattgcgtaattttgc 183  Q
    ||||||||| ||||||||||    
T  33595339 gactaattgtgtaattttgc 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 14763438 - 14763319
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||| ||||||||||||||||||||||||||||||    
T  14763438 cataaaaaatgataagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagg 14763339  T
Q  164 gactaattgcgtaattttgc 183  Q
    |||| ||||  |||||||||    
T  14763338 gactgattgtataattttgc 14763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23068923 - 23069042
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||        |||||| ||||||||||||||||||||||||||||||     
T  23068923 cataaaaaatgataagatattgtcattttataacataaag-actaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaagttaaga 23069020  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  23069021 gactaattgtgtaattttgcct 23069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 23068797 - 23068695
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23068797 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23068698  T
Q  183 cct 185  Q
    |||    
T  23068697 cct 23068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 33595564 - 33595666
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33595564 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 33595663  T
Q  183 cct 185  Q
    |||    
T  33595664 cct 33595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 4243167 - 4243269
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4243167 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 4243266  T
Q  183 cct 185  Q
    |||    
T  4243267 cct 4243269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 6755161 - 6755262
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6755161 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 6755260  T
Q  183 cc 184  Q
    ||    
T  6755261 cc 6755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 3218252 - 3218152
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3218252 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3218153  T
Q  183 c 183  Q
    |    
T  3218152 c 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 3922634 - 3922538
Alignment:
Q  89 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3922634 ttttataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 3922538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 6755037 - 6754946
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||| ||||||||||||||    
T  6755037 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacaaaagtattacctaaaataaa 6754946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 14763550 - 14763654
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||| ||||||||||||||||||          |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  14763550 ttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaagggactaattgtgtaattt 14763649  T
Q  181 tgcct 185  Q
    |||||    
T  14763650 tgcct 14763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 10810201 - 10810322
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||| |||||||||||||||| |||||| ||||||||  ||||        |||||||||| | ||||||||||||||| || |||| |    
T  10810201 cataaaaaataataaaatattgtcattttatatcataaaagactaaataatgacaaaaaaaagataaaggacaagagtgttacctaaaattaaattaaag 10810300  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  10810301 gactaattgtgtaattttgcct 10810322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 14655134 - 14655078
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||    
T  14655134 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaattttg 14655078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 20491722 - 20491766
Alignment:
Q  69 aaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  20491722 aaaatgataagatattgtcattttataacataaatgattaaatcg 20491766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 28852246 - 28852188
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  28852246 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 28852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3218326 - 3218294
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  3218326 atgaagatttacgtttgcctatgagtttgatga 3218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4243084 - 4243116
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  4243084 atgaagatttacgtttgcctatgagtttgatga 4243116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6755078 - 6755110
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  6755078 atgaagatttacgtttgcctatgagtttgatga 6755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 15633800 - 15633876
Alignment:
Q  421 actagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgt 497  Q
    ||||| |||||||||| || |||||||||||||||||| ||||  | ||||||| |||| || ||||||||| ||||    
T  15633800 actaggtaattatgctattaaaatattagactcattaaaaaaaggtcacatcaaattaaaatgtctaataaagatgt 15633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 2316745 - 2316804
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  2316745 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 2316804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9899253 - 9899194
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899253 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 9899451 - 9899510
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899451 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 13178479 - 13178522
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  13178479 gataaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 22569019 - 22569062
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  22569019 gataaaggaccaaactgttacctaaaattaagttaagggactaa 22569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24896429 - 24896488
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||| ||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  24896429 gataaatgactaaactgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 24896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 30121584 - 30121639
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||||| || |||| |||| || || ||||||||    
T  30121584 gataaaggacgaaagtgttacctaaaattaatttaaaggacgaaatgtgtaatttt 30121639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 32557393 - 32557436
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  32557393 gataaaggaccaaattgttacctaaaattaagttaagggactaa 32557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 1925408 - 1925466
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1925408 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1925466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 10026198 - 10026140
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  10026198 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 10027124 - 10027182
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||  |||||| |||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcct 10027182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 21926121 - 21926063
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21926121 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 11000055 - 11000096
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaa 109  Q
    |||||||||||||||||| |||||||||| |||||| |||||    
T  11000055 aaaaatgataagatattgccattttataatataaagaactaa 11000096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 24176156 - 24176096
Alignment:
Q  225 tgtactttgtgaactcaacataacacatgt--attttttcattgttagatcccaccaagga 283  Q
    |||||||||| ||||||||||||||||| |   |||||||||||  |||||||||||||||    
T  24176156 tgtactttgttaactcaacataacacattttatttttttcattgacagatcccaccaagga 24176096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 1e-40; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 32177975 - 32177854
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||| |    
T  32177975 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaag 32177876  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  32177875 gactaattgtgtaattttgcct 32177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49113982 - 49113861
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||| |    
T  49113982 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaag 49113883  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  49113882 gactaattgtgtaattttgcct 49113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 32523321 - 32523213
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  32523321 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 32523222  T
Q  164 gactaattg 172  Q
    |||||||||    
T  32523221 gactaattg 32523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 28408362 - 28408244
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||    
T  28408362 cataaaaaatgataagatattgtcattttataacataaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 28408263  T
Q  164 gactaattgcgtaattttg 182  Q
    | ||||||| |||||||||    
T  28408262 ggctaattgtgtaattttg 28408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 37453292 - 37453410
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||||    
T  37453292 cataaaaaatgataagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 37453391  T
Q  164 gactaattgcgtaattttg 182  Q
    |||| |||| |||||||||    
T  37453392 gactgattgtgtaattttg 37453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 19305969 - 19306090
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||    
T  19305969 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttaactaaaataaagttaagg 19306068  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  19306069 gactaattgtgctattttgcct 19306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 8437530 - 8437652
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  8437530 cataaaaaatgataagatattggcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 8437629  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||  ||||||||||||    
T  8437630 ggactaattatgtaattttgcct 8437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 2933494 - 2933615
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  2933494 cataaaaaatgataagatattttcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagg 2933593  T
Q  164 gactaattgcgtaattttgcct 185  Q
     |||||||| |  |||||||||    
T  2933594 aactaattgtgctattttgcct 2933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 7417632 - 7417511
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||    
T  7417632 catacaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaag 7417533  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    ||| |||||| |||||||||||    
T  7417532 ggattaattgtgtaattttgcc 7417511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 45746950 - 45747070
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||| |||||     
T  45746950 cataaaaaatgataagatattgtcattttataacataaa-gactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaga 45747048  T
Q  164 gactaattgcgtaattttgcct 185  Q
     ||||||||  |||||||||||    
T  45747049 aactaattgtataattttgcct 45747070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 32523447 - 32523546
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32523447 ttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 32523546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 1511416 - 1511533
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| | ||||||||||||    
T  1511416 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaaggacgaaagtgttacctaaatttaagttaagggac 1511514  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  1511515 taattgtgtaattttgcct 1511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 10878744 - 10878624
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| ||||||||||    
T  10878744 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaggg 10878645  T
Q  165 actaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||    
T  10878644 actaattgtgtaattttgcct 10878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 28408486 - 28408587
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28408486 ttgttattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 28408584  T
Q  183 cct 185  Q
    |||    
T  28408585 cct 28408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 32832354 - 32832246
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||        |||||| ||  |||||||||||||||||||| ||||||    
T  32832354 cataaaaaatgataagatattgtcattttataacataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagg 32832255  T
Q  164 gactaattg 172  Q
    |||||||||    
T  32832254 gactaattg 32832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 31894374 - 31894257
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| |||||||||||    
T  31894374 taaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa--ataaaggacgaaagtgttacctaaaattaagttaaggga 31894277  T
Q  166 ctaattgcgtaattttgcct 185  Q
    ||| ||| ||||||||||||    
T  31894276 ctatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 8437406 - 8437304
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||| ||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8437406 ttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 8437307  T
Q  183 cct 185  Q
    |||    
T  8437306 cct 8437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 32178099 - 32178197
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  32178099 ttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 32178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 7417757 - 7417858
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7417757 ttgttattttataacaaaaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 7417855  T
Q  183 cct 185  Q
    |||    
T  7417856 cct 7417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 32832475 - 32832576
Alignment:
Q  80 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 179  Q
    ||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  32832475 atattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatt 32832574  T
Q  180 tt 181  Q
    ||    
T  32832575 tt 32832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 2933387 - 2933289
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2933387 ttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 2933289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 19305798 - 19305739
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19305798 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 19305739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 49114150 - 49114209
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49114150 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 49114209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 24986819 - 24986719
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  24986819 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggactaatt--gtaattttg 24986722  T
Q  183 cct 185  Q
    |||    
T  24986721 cct 24986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 44307738 - 44307610
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||                ||||||||||||||||||||||||||| ||    
T  44307738 cataaaaaatgataaaatagtgtcattttataatataaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaa 44307639  T
Q  157 gttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||| ||||||||||||    
T  44307638 gttaagggactaattgtgtaattttgcct 44307610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 29226390 - 29226337
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29226390 cataaaaaatgataagatattatcattttataacataaaggactaaatcgtgac 29226337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 31894500 - 31894601
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  31894500 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 31894598  T
Q  183 cct 185  Q
    |||    
T  31894599 cct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 1511290 - 1511190
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||    
T  1511290 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttg 1511192  T
Q  183 cc 184  Q
    ||    
T  1511191 cc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 44307906 - 44307964
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  44307906 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 44307964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 45746825 - 45746739
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||| ||||||||||||| |||| |||||||||||         |||||||| |||||||||||||||||||||| |||||||||||    
T  45746825 ttgttattttataacatagaggattaaatcgtgacaaaaaataaataaaggaagaaagtgttacctaaaataaaggtaagggactaa 45746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 27612284 - 27612329
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||    
T  27612284 aaaaatgataagatattgtcattttataacatataagactaaatcg 27612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 30060630 - 30060675
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||    
T  30060630 taaaaaatgataaaatattgtcatttcataacataaaggactaaat 30060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 7172989 - 7172930
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  7172989 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 7172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 4119569 - 4119619
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgc 435  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  4119569 ggtaattttataaatttgttgaagcagttggagattactaggtaattatgc 4119619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 503
Target Start/End: Complemental strand, 24708945 - 24708831
Alignment:
Q  387 taattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatct 486  Q
    |||||||||  ||||||| |||||||| ||  ||| | ||||||||||||    ||||||||||||| |||| ||||| | |||||||||||| || |||    
T  24708945 taattttatggatttgttgaaggagttgga--ttattggataattatgctaccaaaatattagactctttaaaaaaatgtcacatcaatttaaaatgtct 24708848  T
Q  487 aataaacatgtttttta 503  Q
    ||||| ||||| |||||    
T  24708847 aataagcatgtatttta 24708831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 37452511 - 37452478
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  37452511 gataaaggacgaaagtgttacctaaaataaagtt 37452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8437489 - 8437457
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  8437489 atgaagatttacgtttgcctatgagtttgatga 8437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 8869640 - 8869584
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||  ||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  8869640 gataaaggaataaaatgttacctaaaattaagttaagggacgaattgtgtaattttg 8869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28408403 - 28408435
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  28408403 atgaagatttacgtttgcctatgagtttgatga 28408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32178016 - 32178048
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32178016 atgaagatttacgtttgcctatgagtttgatga 32178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32523362 - 32523394
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32523362 atgaagatttacgtttgcctatgagtttgatga 32523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 8522382 - 8522323
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 10543667 - 10543710
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||  ||| |||||||||||||||||||||||||||||    
T  10543667 gataaaggatcaaactgttacctaaaataaagttaagggactaa 10543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 34287773 - 34287816
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| |||||||||||| |||| |||||||||||||||    
T  34287773 gataaaggaccaaagtgttacctgaaattaagttaagggactaa 34287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 38495170 - 38495229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  38495170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 38495229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 41922340 - 41922281
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  41922340 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 41922281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43575306 - 43575365
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 43575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 45055380 - 45055321
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055380 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 45055578 - 45055637
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055578 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 10878921 - 10878975
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||| | ||| ||||||| ||||||||| |||||||| ||||||||    
T  10878921 ataaaggacgaaaatattagctaaaattaagttaaggtactaattgtgtaatttt 10878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 12423903 - 12423845
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  12423903 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 21733126 - 21733068
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||| ||| ||| |||||||| |||| |||||||||||||||| | |||||||||||    
T  21733126 gataaaagaccaaactgttacctgaaattaagttaagggactaatagtgtaattttgcc 21733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 31283409 - 31283467
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||| |||||| |||||||||||||||  | |||||||||||    
T  31283409 gataaaggaccaaactgttacataaaattaagttaagggactaaaagtgtaattttgcc 31283467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 37453179 - 37453145
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgac 117  Q
    |||| ||||||||||||||||||||||||||||||    
T  37453179 ttgttattttataacataaaggactaaatcgtgac 37453145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 42391354 - 42391296
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  42391354 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 42391296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 44458040 - 44458098
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44458040 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44458098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1511371 - 1511338
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  1511371 atgaagatttacgtttgtctatgagtttgatgaa 1511338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 43161650 - 43161703
Alignment:
Q  131 aggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||| ||| || |||| |||||||||||| ||||| |||||||||||    
T  43161650 aggacgaaagtattagctgaaattaagttaagggacaaattgtgtaattttgcc 43161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44307778 - 44307811
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  44307778 atgaagatttacgtttgtctatgagtttgatgaa 44307811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 137142 - 137260
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || ||||    
T  137142 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggac 137241  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||  ||||||||||||    
T  137242 taattatgtaattttgcct 137260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 137017 - 136915
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  137017 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 136918  T
Q  183 cct 185  Q
    |||    
T  136917 cct 136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 330423 - 330541
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || ||||    
T  330423 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggac 330522  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||  ||||||||||||    
T  330523 taattatgtaattttgcct 330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 330298 - 330196
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  330298 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 330199  T
Q  183 cct 185  Q
    |||    
T  330198 cct 330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 12841 - 12943
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  12841 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 12940  T
Q  183 cct 185  Q
    |||    
T  12941 cct 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 12713 - 12632
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttaccta 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||    
T  12713 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttaccta 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 1097 - 1214
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||| |||| ||||||||||| |||||| ||||||||||||||        ||||||| |||| ||||||||||||||| || |||| |    
T  1097 cataaaaaataataaaatatagtcattttatatcataaaagactaaatcgtgacaaaaaaaagataaagaacgagagtgttacctaaaattaaattaaag 1196  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  1197 gactaattgtgtaatttt 1214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 11995 - 11940
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  11995 aaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 96248 - 96377
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||  ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  96248 agtgaattgagggtaattttatagatttgttgaagatgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 96347  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  96348 atttaaaatgtctaataagcatgtatttta 96377  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 15263 - 15310
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  15263 ataaaaaattataagaaattgtcattttataacataaagaactaaatc 15310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 1115 - 1070
Alignment:
Q  371 catagtgaattgagggtaattttataaatttgttaaaggagttaga 416  Q
    |||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  1115 catagtaaattgatggtaattatataagtttgttaaaggagttaga 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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