View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7577_2D_low_10 (Length: 793)

Name: NF7577_2D_low_10
Description: NF7577_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7577_2D_low_10
NF7577_2D_low_10
[»] scaffold0169 (1 HSPs)
scaffold0169 (194-541)||(2612-2959)
[»] chr8 (60 HSPs)
chr8 (194-545)||(758811-759164)
chr8 (64-185)||(35482701-35482822)
chr8 (64-181)||(17875771-17875888)
chr8 (64-184)||(30904586-30904705)
chr8 (67-185)||(2967869-2967987)
chr8 (64-185)||(27912094-27912216)
chr8 (64-185)||(27958513-27958635)
chr8 (83-185)||(2968114-2968216)
chr8 (67-180)||(10682288-10682402)
chr8 (68-184)||(44379522-44379638)
chr8 (64-182)||(17844107-17844224)
chr8 (83-185)||(17876014-17876116)
chr8 (83-185)||(27912342-27912444)
chr8 (83-185)||(27958761-27958863)
chr8 (83-185)||(35482946-35483048)
chr8 (64-185)||(13327488-13327611)
chr8 (68-185)||(3691581-3691699)
chr8 (83-185)||(30904360-30904462)
chr8 (68-185)||(23792810-23792926)
chr8 (70-184)||(30928541-30928658)
chr8 (64-184)||(38464641-38464760)
chr8 (67-185)||(27523183-27523301)
chr8 (83-185)||(10682060-10682161)
chr8 (83-185)||(14577108-14577212)
chr8 (83-185)||(3691830-3691932)
chr8 (127-185)||(20178370-20178428)
chr8 (64-185)||(20223098-20223226)
chr8 (67-172)||(4128753-4128858)
chr8 (88-184)||(38464887-38464982)
chr8 (68-185)||(42123931-42124051)
chr8 (127-184)||(13327262-13327319)
chr8 (372-503)||(14714909-14715041)
chr8 (83-171)||(44379771-44379859)
chr8 (67-114)||(7899830-7899877)
chr8 (127-182)||(30928315-30928370)
chr8 (68-111)||(31231317-31231360)
chr8 (126-184)||(20223394-20223452)
chr8 (126-184)||(21660983-21661041)
chr8 (126-184)||(30253882-30253940)
chr8 (83-183)||(42123703-42123802)
chr8 (126-169)||(30463929-30463972)
chr8 (126-169)||(34213400-34213443)
chr8 (126-184)||(28828472-28828530)
chr8 (1-33)||(10682212-10682244)
chr8 (126-182)||(13795516-13795572)
chr8 (1-33)||(30904513-30904545)
chr8 (1-33)||(35482863-35482895)
chr8 (126-182)||(37727201-37727257)
chr8 (126-185)||(148292-148351)
chr8 (126-185)||(21660725-21660784)
chr8 (127-182)||(26938441-26938496)
chr8 (126-169)||(27712779-27712822)
chr8 (126-185)||(33279194-33279253)
chr8 (126-165)||(34632244-34632283)
chr8 (126-184)||(10925358-10925416)
chr8 (126-184)||(27713020-27713078)
chr8 (126-184)||(34199091-34199149)
chr8 (1-34)||(20223266-20223299)
chr8 (126-183)||(29596403-29596460)
chr8 (128-185)||(39198614-39198671)
[»] chr5 (61 HSPs)
chr5 (64-185)||(40833935-40834056)
chr5 (64-184)||(32936431-32936551)
chr5 (64-184)||(20769712-20769832)
chr5 (64-184)||(2094798-2094918)
chr5 (64-184)||(30370737-30370856)
chr5 (64-185)||(13600671-13600792)
chr5 (64-185)||(18485885-18486006)
chr5 (68-185)||(35363218-35363336)
chr5 (64-185)||(7145532-7145658)
chr5 (68-184)||(19558102-19558218)
chr5 (64-185)||(3539822-3539942)
chr5 (68-185)||(15179019-15179136)
chr5 (68-185)||(35362147-35362264)
chr5 (83-184)||(35362984-35363085)
chr5 (64-184)||(27843023-27843143)
chr5 (83-185)||(32936205-32936307)
chr5 (83-184)||(18485659-18485760)
chr5 (83-184)||(40834180-40834281)
chr5 (83-185)||(2094574-2094676)
chr5 (64-184)||(7145763-7145884)
chr5 (83-184)||(30370511-30370612)
chr5 (64-185)||(13600443-13600567)
chr5 (64-182)||(20769936-20770056)
chr5 (68-184)||(25363016-25363131)
chr5 (68-185)||(132278-132393)
chr5 (68-185)||(32994376-32994501)
chr5 (126-185)||(20339155-20339214)
chr5 (133-185)||(37093738-37093790)
chr5 (83-185)||(25363260-25363362)
chr5 (64-112)||(14274308-14274356)
chr5 (83-181)||(3539600-3539699)
chr5 (127-185)||(32458075-32458133)
chr5 (83-184)||(15178789-15178890)
chr5 (64-111)||(3294396-3294443)
chr5 (68-111)||(42858555-42858598)
chr5 (64-162)||(38981786-38981884)
chr5 (385-494)||(24541419-24541527)
chr5 (68-112)||(33568984-33569028)
chr5 (126-181)||(132048-132103)
chr5 (194-280)||(24541363-24541449)
chr5 (400-502)||(38015340-38015442)
chr5 (67-112)||(27342885-27342930)
chr5 (1-34)||(35363135-35363168)
chr5 (1-33)||(18485812-18485844)
chr5 (1-33)||(30370663-30370695)
chr5 (1-33)||(32936358-32936390)
chr5 (1-33)||(40834097-40834129)
chr5 (126-185)||(1643538-1643597)
chr5 (126-169)||(2467074-2467117)
chr5 (385-436)||(9012263-9012314)
chr5 (126-185)||(16736800-16736859)
chr5 (68-111)||(19850516-19850559)
chr5 (126-169)||(24858418-24858461)
chr5 (126-185)||(40952066-40952125)
chr5 (126-184)||(2426229-2426287)
chr5 (126-184)||(14871734-14871792)
chr5 (126-184)||(19131126-19131184)
chr5 (126-184)||(33429789-33429847)
chr5 (126-184)||(39589615-39589673)
chr5 (1-34)||(2094724-2094757)
chr5 (1-34)||(3539748-3539781)
[»] chr4 (87 HSPs)
chr4 (64-185)||(23163505-23163626)
chr4 (64-185)||(49621438-49621559)
chr4 (64-184)||(26202522-26202642)
chr4 (64-184)||(33692262-33692382)
chr4 (64-182)||(50161342-50161460)
chr4 (64-184)||(28458747-28458867)
chr4 (64-185)||(9526034-9526155)
chr4 (64-185)||(48419442-48419563)
chr4 (64-185)||(21053521-21053642)
chr4 (64-184)||(42857027-42857147)
chr4 (64-184)||(37872767-37872889)
chr4 (64-184)||(41689389-41689511)
chr4 (64-182)||(3546490-3546609)
chr4 (64-172)||(5260206-5260313)
chr4 (64-184)||(55140198-55140317)
chr4 (64-185)||(20931202-20931324)
chr4 (66-184)||(21707830-21707948)
chr4 (64-172)||(13294614-13294723)
chr4 (67-185)||(33369508-33369628)
chr4 (64-185)||(46143496-46143617)
chr4 (64-184)||(52690321-52690443)
chr4 (83-185)||(13294847-13294949)
chr4 (83-185)||(49621682-49621784)
chr4 (83-184)||(23163281-23163382)
chr4 (80-185)||(20930974-20931079)
chr4 (64-181)||(33369736-33369854)
chr4 (68-185)||(25297679-25297798)
chr4 (64-184)||(9525805-9525929)
chr4 (64-185)||(42856803-42856924)
chr4 (83-181)||(50161118-50161218)
chr4 (64-182)||(28458523-28458643)
chr4 (83-183)||(46143273-46143373)
chr4 (68-184)||(30055208-30055326)
chr4 (64-185)||(23549723-23549847)
chr4 (83-185)||(55742852-55742954)
chr4 (83-185)||(33692507-33692608)
chr4 (68-184)||(2685985-2686097)
chr4 (83-185)||(37873007-37873109)
chr4 (64-185)||(3546713-3546837)
chr4 (83-185)||(52690095-52690196)
chr4 (126-181)||(30799295-30799350)
chr4 (82-184)||(55742621-55742723)
chr4 (126-183)||(30799611-30799668)
chr4 (374-503)||(37531594-37531723)
chr4 (129-185)||(30055494-30055550)
chr4 (83-184)||(5260437-5260538)
chr4 (64-165)||(22335454-22335554)
chr4 (83-170)||(23549473-23549560)
chr4 (126-185)||(32488583-32488642)
chr4 (372-503)||(50158506-50158637)
chr4 (68-114)||(30799391-30799437)
chr4 (83-181)||(41689636-41689734)
chr4 (64-110)||(50977677-50977723)
chr4 (68-112)||(53232328-53232372)
chr4 (127-183)||(55140485-55140541)
chr4 (83-153)||(21053329-21053399)
chr4 (127-181)||(25297969-25298023)
chr4 (1-34)||(3546650-3546683)
chr4 (1-33)||(9525961-9525993)
chr4 (1-33)||(20931129-20931161)
chr4 (1-33)||(21707755-21707787)
chr4 (1-33)||(23163432-23163464)
chr4 (129-169)||(23963107-23963147)
chr4 (1-33)||(33369673-33369705)
chr4 (1-33)||(41689553-41689585)
chr4 (1-33)||(42856954-42856986)
chr4 (1-33)||(48419369-48419401)
chr4 (1-33)||(49621600-49621632)
chr4 (1-33)||(55742769-55742801)
chr4 (126-185)||(9902652-9902711)
chr4 (126-185)||(10993624-10993683)
chr4 (126-185)||(20983913-20983972)
chr4 (126-185)||(20984170-20984229)
chr4 (126-185)||(32922323-32922382)
chr4 (227-283)||(42728384-42728442)
chr4 (126-185)||(52654188-52654247)
chr4 (126-184)||(21360457-21360515)
chr4 (126-184)||(45655948-45656006)
chr4 (126-184)||(52538135-52538193)
chr4 (126-184)||(52653931-52653989)
chr4 (68-113)||(563721-563765)
chr4 (128-169)||(9644767-9644808)
chr4 (64-113)||(17872388-17872437)
chr4 (1-34)||(21053447-21053480)
chr4 (367-396)||(22192582-22192611)
chr4 (1-34)||(37872924-37872957)
chr4 (75-112)||(43914640-43914676)
[»] chr3 (60 HSPs)
chr3 (64-185)||(22316719-22316840)
chr3 (64-181)||(36229766-36229883)
chr3 (64-185)||(37513090-37513211)
chr3 (64-185)||(25847444-25847565)
chr3 (64-184)||(28829753-28829872)
chr3 (64-185)||(8852030-8852152)
chr3 (64-185)||(22975344-22975465)
chr3 (64-183)||(48434027-48434147)
chr3 (64-166)||(49984936-49985038)
chr3 (64-184)||(23043414-23043535)
chr3 (64-185)||(49620977-49621098)
chr3 (83-185)||(8851803-8851905)
chr3 (64-185)||(25847669-25847791)
chr3 (88-184)||(37513340-37513436)
chr3 (83-184)||(22316964-22317065)
chr3 (68-181)||(44506049-44506162)
chr3 (64-185)||(17574372-17574492)
chr3 (83-184)||(49621223-49621324)
chr3 (83-182)||(11121526-11121626)
chr3 (64-161)||(55009121-55009217)
chr3 (83-182)||(22975589-22975688)
chr3 (64-183)||(49711626-49711743)
chr3 (83-181)||(48433801-48433901)
chr3 (83-185)||(28829996-28830099)
chr3 (83-181)||(36230007-36230106)
chr3 (83-185)||(49711400-49711501)
chr3 (64-185)||(11121282-11121405)
chr3 (127-185)||(9296382-9296440)
chr3 (126-184)||(33491692-33491750)
chr3 (83-184)||(44506288-44506389)
chr3 (126-182)||(55009386-55009442)
chr3 (83-181)||(3612598-3612697)
chr3 (64-107)||(9296607-9296650)
chr3 (126-185)||(33491601-33491660)
chr3 (126-181)||(23043186-23043241)
chr3 (64-184)||(35850875-35850994)
chr3 (68-113)||(1341957-1342002)
chr3 (126-182)||(10687880-10687936)
chr3 (126-185)||(2862700-2862759)
chr3 (64-111)||(12012782-12012829)
chr3 (126-185)||(41944132-41944191)
chr3 (67-181)||(3612826-3612938)
chr3 (126-184)||(39930633-39930691)
chr3 (69-111)||(43006987-43007029)
chr3 (1-34)||(49711551-49711584)
chr3 (1-33)||(8851957-8851989)
chr3 (1-33)||(25847606-25847638)
chr3 (1-33)||(49621139-49621171)
chr3 (126-181)||(1342180-1342235)
chr3 (229-280)||(29195980-29196031)
chr3 (126-185)||(31574509-31574568)
chr3 (126-185)||(50711251-50711310)
chr3 (126-184)||(11220992-11221050)
chr3 (126-184)||(14463379-14463437)
chr3 (126-184)||(20209150-20209208)
chr3 (126-184)||(44664621-44664679)
chr3 (126-184)||(51000641-51000699)
chr3 (64-105)||(7603619-7603660)
chr3 (1-34)||(22975506-22975539)
chr3 (68-113)||(34333730-34333775)
[»] chr2 (56 HSPs)
chr2 (64-185)||(9320028-9320149)
chr2 (64-185)||(18916624-18916745)
chr2 (64-185)||(17846007-17846128)
chr2 (64-181)||(44536410-44536527)
chr2 (64-184)||(10044745-10044865)
chr2 (64-184)||(20364196-20364316)
chr2 (64-181)||(4261156-4261273)
chr2 (64-184)||(10108813-10108934)
chr2 (64-172)||(2318505-2318612)
chr2 (65-185)||(8322411-8322529)
chr2 (83-185)||(27360366-27360468)
chr2 (68-184)||(30337424-30337540)
chr2 (83-182)||(9319804-9319903)
chr2 (83-185)||(17846252-17846354)
chr2 (83-185)||(18916869-18916971)
chr2 (66-185)||(27360118-27360239)
chr2 (83-185)||(2318735-2318836)
chr2 (83-184)||(20363970-20364071)
chr2 (64-184)||(601327-601449)
chr2 (64-183)||(10109039-10109160)
chr2 (64-185)||(4261377-4261502)
chr2 (126-185)||(601620-601679)
chr2 (127-181)||(5547339-5547393)
chr2 (126-184)||(10045035-10045092)
chr2 (68-181)||(13862496-13862608)
chr2 (67-113)||(37084688-37084734)
chr2 (127-184)||(18178377-18178434)
chr2 (617-662)||(20117722-20117767)
chr2 (126-185)||(44536178-44536237)
chr2 (127-185)||(31769781-31769839)
chr2 (70-111)||(10520866-10520907)
chr2 (64-111)||(9991921-9991968)
chr2 (126-185)||(30337716-30337775)
chr2 (126-184)||(10714008-10714066)
chr2 (68-106)||(43520401-43520439)
chr2 (126-183)||(33274653-33274710)
chr2 (1-33)||(2318653-2318685)
chr2 (391-503)||(3395029-3395141)
chr2 (1-33)||(18916786-18916818)
chr2 (1-33)||(20364123-20364155)
chr2 (1-33)||(27360282-27360314)
chr2 (126-185)||(1650759-1650818)
chr2 (67-106)||(5547308-5547347)
chr2 (126-169)||(11723720-11723763)
chr2 (126-185)||(30488336-30488395)
chr2 (68-111)||(31770014-31770057)
chr2 (126-185)||(40710315-40710374)
chr2 (143-185)||(981780-981822)
chr2 (141-183)||(5547103-5547145)
chr2 (127-185)||(26499421-26499479)
chr2 (126-184)||(26499667-26499725)
chr2 (126-184)||(35412133-35412191)
chr2 (68-102)||(44769387-44769421)
chr2 (126-163)||(2450109-2450146)
chr2 (126-183)||(28789123-28789180)
chr2 (1-34)||(44536335-44536368)
[»] chr1 (60 HSPs)
chr1 (64-185)||(2026720-2026841)
chr1 (64-185)||(1549326-1549447)
chr1 (64-185)||(17611650-17611771)
chr1 (64-182)||(30002435-30002552)
chr1 (64-185)||(30562783-30562903)
chr1 (64-172)||(40902553-40902661)
chr1 (64-185)||(12139023-12139144)
chr1 (64-185)||(17985513-17985634)
chr1 (64-181)||(25780115-25780231)
chr1 (64-184)||(7114089-7114208)
chr1 (83-184)||(40902327-40902428)
chr1 (83-185)||(17611424-17611526)
chr1 (83-181)||(17985290-17985388)
chr1 (83-184)||(2026964-2027065)
chr1 (89-185)||(7113864-7113960)
chr1 (83-185)||(12115196-12115298)
chr1 (83-181)||(30002214-30002312)
chr1 (88-184)||(12139273-12139370)
chr1 (83-185)||(30563027-30563130)
chr1 (64-182)||(25779887-25780010)
chr1 (83-184)||(19897176-19897277)
chr1 (64-185)||(19897402-19897525)
chr1 (83-185)||(4969609-4969711)
chr1 (68-168)||(4969380-4969481)
chr1 (64-182)||(12114954-12115074)
chr1 (374-503)||(28961975-28962104)
chr1 (130-185)||(40290073-40290128)
chr1 (127-185)||(25267441-25267499)
chr1 (126-185)||(5586486-5586545)
chr1 (126-169)||(26874483-26874526)
chr1 (126-185)||(29233686-29233745)
chr1 (441-503)||(31089937-31090000)
chr1 (126-185)||(35521463-35521522)
chr1 (126-169)||(45315512-45315555)
chr1 (126-184)||(34480440-34480498)
chr1 (65-111)||(44066951-44066997)
chr1 (126-184)||(49564185-49564243)
chr1 (360-502)||(31421019-31421163)
chr1 (68-113)||(47193958-47194003)
chr1 (1-33)||(7114016-7114048)
chr1 (1-33)||(17611577-17611609)
chr1 (66-184)||(25267181-25267294)
chr1 (68-112)||(30306852-30306896)
chr1 (1-33)||(30562944-30562976)
chr1 (1-33)||(40902480-40902512)
chr1 (129-184)||(49564599-49564655)
chr1 (126-185)||(5618070-5618129)
chr1 (126-169)||(6489128-6489171)
chr1 (126-185)||(25012646-25012705)
chr1 (126-185)||(34480183-34480242)
chr1 (3-33)||(2026884-2026914)
chr1 (126-184)||(4695192-4695250)
chr1 (126-184)||(7349770-7349828)
chr1 (127-185)||(8853352-8853410)
chr1 (68-110)||(9172266-9172308)
chr1 (68-110)||(9180248-9180290)
chr1 (126-184)||(28554190-28554248)
chr1 (1-31)||(30002364-30002394)
chr1 (126-184)||(31289254-31289312)
chr1 (126-184)||(39672836-39672894)
[»] chr6 (36 HSPs)
chr6 (64-184)||(3922764-3922884)
chr6 (68-185)||(3218370-3218487)
chr6 (64-185)||(4242922-4243043)
chr6 (64-183)||(33595320-33595439)
chr6 (64-183)||(14763319-14763438)
chr6 (64-185)||(23068923-23069042)
chr6 (83-185)||(23068695-23068797)
chr6 (83-185)||(33595564-33595666)
chr6 (83-185)||(4243167-4243269)
chr6 (83-184)||(6755161-6755262)
chr6 (83-183)||(3218152-3218252)
chr6 (89-185)||(3922538-3922634)
chr6 (64-156)||(6754946-6755037)
chr6 (83-185)||(14763550-14763654)
chr6 (64-185)||(10810201-10810322)
chr6 (126-182)||(14655078-14655134)
chr6 (69-113)||(20491722-20491766)
chr6 (126-184)||(28852188-28852246)
chr6 (1-33)||(3218294-3218326)
chr6 (1-33)||(4243084-4243116)
chr6 (1-33)||(6755078-6755110)
chr6 (421-497)||(15633800-15633876)
chr6 (126-185)||(2316745-2316804)
chr6 (126-185)||(9899194-9899253)
chr6 (126-185)||(9899451-9899510)
chr6 (126-169)||(13178479-13178522)
chr6 (126-169)||(22569019-22569062)
chr6 (126-185)||(24896429-24896488)
chr6 (126-181)||(30121584-30121639)
chr6 (126-169)||(32557393-32557436)
chr6 (127-185)||(1925408-1925466)
chr6 (126-184)||(10026140-10026198)
chr6 (127-185)||(10027124-10027182)
chr6 (127-185)||(21926063-21926121)
chr6 (68-109)||(11000055-11000096)
chr6 (225-283)||(24176096-24176156)
[»] chr7 (59 HSPs)
chr7 (64-185)||(32177854-32177975)
chr7 (64-185)||(49113861-49113982)
chr7 (64-172)||(32523213-32523321)
chr7 (64-182)||(28408244-28408362)
chr7 (64-182)||(37453292-37453410)
chr7 (64-185)||(19305969-19306090)
chr7 (64-185)||(8437530-8437652)
chr7 (64-185)||(2933494-2933615)
chr7 (64-184)||(7417511-7417632)
chr7 (64-185)||(45746950-45747070)
chr7 (83-182)||(32523447-32523546)
chr7 (67-185)||(1511416-1511533)
chr7 (67-185)||(10878624-10878744)
chr7 (83-185)||(28408486-28408587)
chr7 (64-172)||(32832246-32832354)
chr7 (66-185)||(31894257-31894374)
chr7 (83-185)||(8437304-8437406)
chr7 (83-181)||(32178099-32178197)
chr7 (83-185)||(7417757-7417858)
chr7 (80-181)||(32832475-32832576)
chr7 (83-181)||(2933289-2933387)
chr7 (126-185)||(19305739-19305798)
chr7 (126-185)||(49114150-49114209)
chr7 (83-185)||(24986719-24986819)
chr7 (64-185)||(44307610-44307738)
chr7 (64-117)||(29226337-29226390)
chr7 (83-185)||(31894500-31894601)
chr7 (83-184)||(1511190-1511290)
chr7 (126-184)||(44307906-44307964)
chr7 (83-169)||(45746739-45746825)
chr7 (68-113)||(27612284-27612329)
chr7 (66-111)||(30060630-30060675)
chr7 (126-185)||(7172930-7172989)
chr7 (385-435)||(4119569-4119619)
chr7 (387-503)||(24708831-24708945)
chr7 (126-159)||(37452478-37452511)
chr7 (1-33)||(8437457-8437489)
chr7 (126-182)||(8869584-8869640)
chr7 (1-33)||(28408403-28408435)
chr7 (1-33)||(32178016-32178048)
chr7 (1-33)||(32523362-32523394)
chr7 (126-185)||(8522323-8522382)
chr7 (126-169)||(10543667-10543710)
chr7 (126-169)||(34287773-34287816)
chr7 (126-185)||(38495170-38495229)
chr7 (126-185)||(41922281-41922340)
chr7 (126-185)||(43575306-43575365)
chr7 (126-185)||(45055321-45055380)
chr7 (126-185)||(45055578-45055637)
chr7 (127-181)||(10878921-10878975)
chr7 (126-184)||(12423845-12423903)
chr7 (126-184)||(21733068-21733126)
chr7 (126-184)||(31283409-31283467)
chr7 (83-117)||(37453145-37453179)
chr7 (126-184)||(42391296-42391354)
chr7 (126-184)||(44458040-44458098)
chr7 (1-34)||(1511338-1511371)
chr7 (131-184)||(43161650-43161703)
chr7 (1-34)||(44307778-44307811)
[»] scaffold0029 (2 HSPs)
scaffold0029 (67-185)||(137142-137260)
scaffold0029 (83-185)||(136915-137017)
[»] scaffold0002 (2 HSPs)
scaffold0002 (67-185)||(330423-330541)
scaffold0002 (83-185)||(330196-330298)
[»] scaffold0311 (2 HSPs)
scaffold0311 (83-185)||(12841-12943)
scaffold0311 (68-149)||(12632-12713)
[»] scaffold1577 (1 HSPs)
scaffold1577 (64-181)||(1097-1214)
[»] scaffold0347 (2 HSPs)
scaffold0347 (128-185)||(12223-12280)
scaffold0347 (129-184)||(11940-11995)
[»] scaffold0012 (1 HSPs)
scaffold0012 (374-503)||(96248-96377)
[»] scaffold0053 (1 HSPs)
scaffold0053 (65-112)||(15263-15310)
[»] scaffold0114 (1 HSPs)
scaffold0114 (371-416)||(1070-1115)


Alignment Details
Target: scaffold0169 (Bit Score: 128; Significance: 9e-66; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 194 - 541
Target Start/End: Complemental strand, 2959 - 2612
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 293  Q
    |||||||||||||| ||||||||||||||  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||| ||||||   | |    
T  2959 tgtcacattattttaaaatgtctaatacacatgtactttgacaactcaacataacacatgcatttttccactgttagatcccaccaaagaccaaacatgg 2860  T
Q  294 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 393  Q
    | |||||| ||| ||  ||| |||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||    |||||   |||  |||||||||    
T  2859 aagtttttaaaggtcgtatagaaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtataggaaatagtcggttggaggtaatttt 2760  T
Q  394 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 493  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| || |||||||| |||||| | |||||||||||| || |||||| | |    
T  2759 atagatttgtagaaggagtttaagattactagataattatgctacctaaataatacactcattatgaaaatctcacatcaatttaaaatgtctaatcagc 2660  T
Q  494 atgttttttaaggataatgaacatttattttgttgactcaacatatca 541  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  2659 atgttttttaaggataataaacatgtattttgttgactcgacatatca 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 194 - 545
Target Start/End: Complemental strand, 759164 - 758811
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 293  Q
    ||||| |||||||| |||||| |||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||||||| ||||||   | |    
T  759164 tgtcatattattttaaaatgtttaatacacatgtactttgacaactcaacataacacatgcatttttccattgttagatcccaccaaagaccaaacatgg 759065  T
Q  294 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 393  Q
    |  ||||| ||| || ||||||||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||  | ||| | | ||| ||||||||||    
T  759064 aattttttaaaggtcggatataaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtatagggaataatcagttgcgggtaatttt 758965  T
Q  394 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 493  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| |  |||||||| |||||| | |||||||||||| ||  ||||||| |    
T  758964 atatatttgtagaaggagtttaagattactagataattatgctacctaaataatccactcattatgaaaatctcacatcaatttaaaatgcctaataagc 758865  T
Q  494 atg--ttttttaaggataatgaacatttattttgttgactcaacatatcacatc 545  Q
    |||  |||||||| |||||| ||||| |||||||| ||||| ||||||||||||    
T  758864 atgttttttttaaagataataaacatgtattttgtcgactcgacatatcacatc 758811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 35482822 - 35482701
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  35482822 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 35482723  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  35482722 gactaattgtgtaattttgcct 35482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 17875888 - 17875771
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  17875888 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 17875789  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  17875788 gactaattgtgtaatttt 17875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 30904586 - 30904705
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  30904586 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagg 30904684  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  30904685 gactaattgtgtaattttgcc 30904705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 2967987 - 2967869
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||    
T  2967987 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggac 2967888  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| |  |||||||||    
T  2967887 taattgtgctattttgcct 2967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 27912216 - 27912094
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  27912216 cataaaaaatgataagatattgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 27912117  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  27912116 ggactaattgtgctattttgcct 27912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 27958635 - 27958513
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  27958635 cataaaaaatgataagatattgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 27958536  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  27958535 ggactaattgtgctattttgcct 27958513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 2968114 - 2968216
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2968114 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2968213  T
Q  183 cct 185  Q
    |||    
T  2968214 cct 2968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 10682288 - 10682402
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||||    
T  10682288 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaataaaggacgaaagtgtttcctaaaataaagttaaggga 10682387  T
Q  166 ctaattgcgtaattt 180  Q
    ||||||| |||||||    
T  10682388 ctaattgtgtaattt 10682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 44379638 - 44379522
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |    
T  44379638 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggatt 44379539  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  44379538 aattgtgtaattttgcc 44379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 17844107 - 17844224
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||| |||||||||    
T  17844107 cataagaaatgataaaatattgtcattttataacataaag-actaaatcgtgacaaaaaataaataaaggacgaaagtgttacctaaaattaagttaagg 17844205  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| |||||||||    
T  17844206 gactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17876014 - 17876116
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17876014 ttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 17876113  T
Q  183 cct 185  Q
    |||    
T  17876114 cct 17876116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27912342 - 27912444
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27912342 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27912441  T
Q  183 cct 185  Q
    |||    
T  27912442 cct 27912444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27958761 - 27958863
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27958761 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 27958860  T
Q  183 cct 185  Q
    |||    
T  27958861 cct 27958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 35482946 - 35483048
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35482946 ttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35483045  T
Q  183 cct 185  Q
    |||    
T  35483046 cct 35483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 13327488 - 13327611
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa--gttaa 161  Q
    ||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||        |||||| ||||||||||||||||||||| ||  |||||    
T  13327488 cataaaaaatgataaaatattatcattttatatcataaaggattaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaattaattgttaa 13327587  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||    
T  13327588 gggactaattgcgtaattttgcct 13327611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 3691699 - 3691581
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||| | ||||||||||    
T  3691699 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggac 3691600  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  3691599 taattgtgtaattttgcct 3691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 30904462 - 30904360
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  30904462 ttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 30904363  T
Q  183 cct 185  Q
    |||    
T  30904362 cct 30904360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 23792810 - 23792926
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||| ||||||||||||||||| |||||||||||||    
T  23792810 aaaaatgataaaataatgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaaggacaaaagtgttacctaaaattaagttaagggact 23792908  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| || |||||||||    
T  23792909 aattgtgttattttgcct 23792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 30928541 - 30928658
Alignment:
Q  70 aaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||           |||||||||||||||||||||||||||| ||||||||||||    
T  30928541 aaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggac 30928640  T
Q  167 taattgcgtaattttgcc 184  Q
    |||||| |||||||||||    
T  30928641 taattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 38464760 - 38464641
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||| |||||||||||| || | |||||||||    
T  38464760 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgggac-aaaaaaagataaaggacaaaagtgttacctgaatttaagttaagg 38464662  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||| | ||| |||||||||||    
T  38464661 gacgagttgtgtaattttgcc 38464641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 27523183 - 27523301
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||         |||||||| |||||||||| ||||||| ||||||| ||||    
T  27523183 aaaaattgataagatattgtcattttataacataaaggactaaatcgggacaagaaaaatataaaggatgaaagtgttaactaaaattaagttaaaggac 27523282  T
Q  167 taattgcgtaattttgcct 185  Q
     ||||| ||||||||||||    
T  27523283 gaattgtgtaattttgcct 27523301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 10682161 - 10682060
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  10682161 ttgttattttataacataaaggactaaatcgtgactaaaaaa-gataaagaacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 10682063  T
Q  183 cct 185  Q
    |||    
T  10682062 cct 10682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 14577108 - 14577212
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14577108 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 14577207  T
Q  181 tgcct 185  Q
    |||||    
T  14577208 tgcct 14577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 3691830 - 3691932
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||| |||||| |||||| |||||||||    
T  3691830 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagggattaattgtgtaattttg 3691929  T
Q  183 cct 185  Q
    |||    
T  3691930 cct 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20178428 - 20178370
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20178370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 20223226 - 20223098
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||                ||||||||||||||||||||||||||| ||    
T  20223226 cataaaaaatgataaaatagtgtcattttataatataaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaa 20223127  T
Q  157 gttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||| ||||||||||||    
T  20223126 gttaagggactaattgtgtaattttgcct 20223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 4128858 - 4128753
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| || |||| ||||    
T  4128858 aaaaaatgataaaatagtttcattttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggac 4128759  T
Q  167 taattg 172  Q
    ||||||    
T  4128758 taattg 4128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 38464887 - 38464982
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||| |||||||||| |||        |||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||    
T  38464887 attttataacataaaagactaaatcgggacaaaaaaaagataaaggacgaaagtgttacctaaaataaag-taagggatgaattgtgtaattttgcc 38464982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 42123931 - 42124051
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||           |||||| ||||||||||||||||||||| || |||||      
T  42123931 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaagataaatgacgaaagtgttacctaaaattaaattaagaa 42124030  T
Q  165 actaattgcgtaattttgcct 185  Q
    | |||||| ||||||||||||    
T  42124031 attaattgtgtaattttgcct 42124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 13327319 - 13327262
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  13327319 ataaaggatgaaagtgttacctaaaattaagttaaggaactaattgtgtaattttgcc 13327262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 14715041 - 14714909
Alignment:
Q  372 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatt-aagaaaattttaca 470  Q
    ||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||| || ||||| | |||    
T  14715041 atagtgaattgagggtaattttatagatttgttgaaggtgttggagattacttggtaattatgtcaccaaactattagattcattaaaaaaaatgtcaca 14714942  T
Q  471 tcaatttaacatatctaataaacatgtttttta 503  Q
    ||||||||| || |||||||| ||||| |||||    
T  14714941 tcaatttaaaatgtctaataagcatgtatttta 14714909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 44379771 - 44379859
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 171  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||| |||||| ||||||||||||| ||||||||| |||||||    
T  44379771 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaatt 44379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 7899877 - 7899830
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgt 114  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7899877 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgt 7899830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 30928370 - 30928315
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||| |||||||||    
T  30928370 ataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 30928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 31231317 - 31231360
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  31231317 aaaaatgataagatattgttattttataacataaaggactaaat 31231360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 20223394 - 20223452
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  20223394 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 20223452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 21660983 - 21661041
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||    
T  21660983 gataaaggactaaaccgttacctaaaataaagttaagggactaaatgtgtaattttgcc 21661041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 30253882 - 30253940
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||||    
T  30253882 gataaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttgcc 30253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 42123802 - 42123703
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||| ||||| ||        ||||||||| |||| | ||| ||||||| |||||||||||||||||| |||||||||    
T  42123802 ttgttattttataacataaaggactatatcgt-acaaaaaaaagataaaggatgaaaatattatctaaaattaagttaagggactaattgtgtaattttg 42123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 30463972 - 30463929
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  30463972 gataaaggactaaactgttacctaaaataaagttaagggactaa 30463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 34213443 - 34213400
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  34213443 gataaaggaccaaactgttacctaaaataaagttaagggactaa 34213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 28828472 - 28828530
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | |||||||||||    
T  28828472 gataaaggactaaattattacctaaaataaagttaagggactaaaagtgtaattttgcc 28828530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10682244 - 10682212
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  10682244 atgaagatttacgtttgcctatgagtttgatga 10682212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 13795572 - 13795516
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||| ||||||| ||||| ||||||| |||||||||||| ||||| |||||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtgtaattttg 13795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30904545 - 30904513
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30904545 atgaagatttacgtttgcctatgagtttgatga 30904513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35482863 - 35482895
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  35482863 atgaagatttacgtttgcctatgagtttgatga 35482895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 37727257 - 37727201
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||  | |||||||||    
T  37727257 gataaaggactaaactgttacctgaaataaagttaagggactaaaagtgtaattttg 37727201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 148351 - 148292
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||  | ||||||||||||    
T  148351 gataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaattttgcct 148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21660784 - 21660725
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21660784 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21660725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 26938441 - 26938496
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||    
T  26938441 ataaaggactaaattgttacctaaaattaagttaagggactaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 27712822 - 27712779
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  27712822 gataaaggactaaactgttacctaaaataaaattaagggactaa 27712779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 33279194 - 33279253
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  33279194 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 33279253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 165
Target Start/End: Complemental strand, 34632283 - 34632244
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  34632283 gataaaggactaaattgttacctaaaataaagttaaggga 34632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 10925358 - 10925416
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||  ||| || ||||||||||||||||||||||||||  | |||||||||||    
T  10925358 gataaaggattaaattgatacctaaaataaagttaagggactaaaagtgtaattttgcc 10925416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 27713020 - 27713078
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  27713020 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 27713078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 34199091 - 34199149
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| |  | |||||||||||    
T  34199091 gataaaggaccaaactgttacctaaaattaagttaagggactgaaagtgtaattttgcc 34199149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20223266 - 20223299
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  20223266 atgaagatttacgtttgtctatgagtttgatgaa 20223299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 29596460 - 29596403
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  29596460 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 29596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 39198671 - 39198614
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  39198671 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 39198614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 40834056 - 40833935
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  40834056 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 40833957  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  40833956 gactaattgtgtaattttgcct 40833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 32936431 - 32936551
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  32936431 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 32936530  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  32936531 gactaattgtgtaattttgcc 32936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 20769832 - 20769712
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||    
T  20769832 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagg 20769733  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  20769732 gactaattgtgtaattttgcc 20769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 2094798 - 2094918
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  2094798 cataaaaaatgataagatattgtcattttataatataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 2094897  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  2094898 gactaattgtgtaattttgcc 2094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 30370737 - 30370856
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||    
T  30370737 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttgcctaaaataaagttaagg 30370835  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  30370836 gactaattgtgtaattttgcc 30370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 13600671 - 13600792
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||     
T  13600671 cataaaaaatgataagatattatcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaaga 13600770  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  13600771 gactaattgtgtaattttgcct 13600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 18485885 - 18486006
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  18485885 cataaaaaatgataagatattgtcattttataagataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 18485984  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  18485985 gactaattgtgctattttgcct 18486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 35363218 - 35363336
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  35363218 aaaactgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggac 35363317  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  35363318 taattgtgtaattttgcct 35363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 7145658 - 7145532
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-----nnnnnnnngataaaggacgaaagtgttacctaaaataaagt 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||    
T  7145658 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagt 7145559  T
Q  159 taagggactaattgcgtaattttgcct 185  Q
    |||||||||||||| || |||||||||    
T  7145558 taagggactaattgtgttattttgcct 7145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 19558102 - 19558218
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| |||||||||||||    
T  19558102 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggact 19558201  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  19558202 aattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3539822 - 3539942
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||| |     
T  3539822 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattatga 3539920  T
Q  164 gactaattgcgtaattttgcct 185  Q
    |||||||||  |||||||||||    
T  3539921 gactaattgtataattttgcct 3539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 15179019 - 15179136
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||||||||    
T  15179019 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggact 15179118  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  15179119 aattgtgtaattttgcct 15179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 35362147 - 35362264
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||| |||||||||||| |||||||||||||    
T  35362147 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggact 35362246  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  35362247 aattgtgtaattttgcct 35362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 35363085 - 35362984
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35363085 ttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35362986  T
Q  183 cc 184  Q
    ||    
T  35362985 cc 35362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 27843143 - 27843023
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||    
T  27843143 cataaaaaatgataaaatattgtcattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagg 27843044  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||  |||||||||||    
T  27843043 gactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 32936307 - 32936205
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  32936307 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgactaattgtgtaattttg 32936208  T
Q  183 cct 185  Q
    |||    
T  32936207 cct 32936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 18485760 - 18485659
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18485760 ttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 18485661  T
Q  183 cc 184  Q
    ||    
T  18485660 cc 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 40834180 - 40834281
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40834180 ttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40834279  T
Q  183 cc 184  Q
    ||    
T  40834280 cc 40834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 2094676 - 2094574
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  2094676 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattgtgtaattttg 2094577  T
Q  183 cct 185  Q
    |||    
T  2094576 cct 2094574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 7145763 - 7145884
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||    
T  7145763 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaag 7145862  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    ||| |||||  |||||||||||    
T  7145863 ggattaattatgtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 30370612 - 30370511
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30370612 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 30370513  T
Q  183 cc 184  Q
    ||    
T  30370512 cc 30370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 13600567 - 13600443
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtta 160  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||    
T  13600567 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggta 13600468  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    | |||||||||| ||||||||||||    
T  13600467 aaggactaattgtgtaattttgcct 13600443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 20769936 - 20770056
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||    
T  20769936 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaa 20770035  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||| |||||||||    
T  20770036 gggactaattgtgtaattttg 20770056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 25363131 - 25363016
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||||||||    
T  25363131 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaatgacgaaagtgttacctaaaattaagttaagggact 25363033  T
Q  168 aattgcgtaattttgcc 184  Q
      ||| |||||||||||    
T  25363032 gtttgtgtaattttgcc 25363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 132278 - 132393
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||  |||||||||  |||    
T  132278 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaa--aaagttaagtaact 132375  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| | ||||||||||    
T  132376 aattgtgcaattttgcct 132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 32994376 - 32994501
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--------gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||                |||||||||||||||||||||||||||| |||||    
T  32994376 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagtt 32994475  T
Q  160 aagggactaattgcgtaattttgcct 185  Q
    ||||||||||||| ||||||||||||    
T  32994476 aagggactaattgtgtaattttgcct 32994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 20339214 - 20339155
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 20339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 37093738 - 37093790
Alignment:
Q  133 gacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37093738 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 25363260 - 25363362
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| || |||||| |||||||| |||||||||    
T  25363260 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaaggaactaattgtgtaattttg 25363359  T
Q  183 cct 185  Q
    |||    
T  25363360 cct 25363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 14274356 - 14274308
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14274356 cataaaaaataataagatattgtcattttataacataaaggactaaatc 14274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 3539699 - 3539600
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| |||||||||||||||||||||||| |||||         |||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||    
T  3539699 ttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtataatttt 3539600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 15178890 - 15178789
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||| ||        |||||||||||||| | ||| ||||||| ||||||| |||||||| |||||||||||    
T  15178890 ttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaaggactaatcgcgtaattttg 15178791  T
Q  183 cc 184  Q
    ||    
T  15178790 cc 15178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 3294443 - 3294396
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  3294443 cataaaaaataataagatattatcattttataacataaaggactaaat 3294396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 42858555 - 42858598
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  42858555 aaaaatgataagatattgacattttataacataaaggactaaat 42858598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 38981786 - 38981884
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||| ||||||| | ||||||||||||||||||| ||||||||||| ||         ||| |||||||||||||||||||||||| || |||||    
T  38981786 cataaaaattgataaggtgttgtcattttataacataagggactaaatcgagatgaaaaaaagatgaaggacgaaagtgttacctaaaattaaattaag 38981884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 385 - 494
Target Start/End: Complemental strand, 24541527 - 24541419
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatat 484  Q
    |||||||||||||  || || |||||||| ||||||||| ||||||||||||    |||| ||||||||||||| ||||| | |||||||||| | || |    
T  24541527 ggtaattttataacattattgaaggagttggagattactggataattatgctaccaaaattttagactcattaa-aaaatgtcacatcaattttaaatgt 24541429  T
Q  485 ctaataaaca 494  Q
    ||||||||||    
T  24541428 ctaataaaca 24541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 33569028 - 33568984
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  33569028 aaaaatgataagatattgtcattttataacataaatgattaaatc 33568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 132103 - 132048
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||| ||||||||||||| || |||||||| |||||| ||||||||    
T  132103 gataaaggacgaaaatgttacctaaaattaaattaagggattaattgtgtaatttt 132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 24541449 - 24541363
Alignment:
Q  194 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 280  Q
    |||||||| | ||| |||||||||||| |   ||| ||||| |||||||||||||||||  |||||| ||||| |||||||||||||    
T  24541449 tgtcacatcaattttaaatgtctaataaacaagtattttgtaaactcaacataacacatacatttttccattggtagatcccaccaa 24541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 502
Target Start/End: Original strand, 38015340 - 38015442
Alignment:
Q  400 ttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgttt 499  Q
    ||||| |||||||| || |||| | |||||||||||| |  ||||| |||| ||||||| ||||| | |||||||||||| || ||||||||| |||| |    
T  38015340 ttgttgaaggagttggaaattattggataattatgctatcaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaataaatatgtat 38015439  T
Q  500 ttt 502  Q
    |||    
T  38015440 ttt 38015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 27342885 - 27342930
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||    
T  27342885 aaaaaatgataaggtatcgccattttataacataaaggactaaatc 27342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35363168 - 35363135
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  35363168 atgaagatttacgtttgcctatgagtttgatgaa 35363135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18485844 - 18485812
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  18485844 atgaagatttacgtttgcctatgagtttgatga 18485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30370695 - 30370663
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30370695 atgaagatttacgtttgcctatgagtttgatga 30370663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32936390 - 32936358
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32936390 atgaagatttacgtttgcctatgagtttgatga 32936358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40834097 - 40834129
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  40834097 atgaagatttacgtttgcctatgagtttgatga 40834129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1643597 - 1643538
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1643597 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1643538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 2467117 - 2467074
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  2467117 gataaaggaccaaactgttacctaaaattaagttaagggactaa 2467074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 436
Target Start/End: Original strand, 9012263 - 9012314
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgct 436  Q
    ||||||||||| |||||||| || ||||| ||||||||||| ||||||||||    
T  9012263 ggtaattttatgaatttgttgaaagagttggagattactaggtaattatgct 9012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 16736859 - 16736800
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  16736859 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 16736800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 19850516 - 19850559
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||    
T  19850516 aaaaatgagaaggtattgtaattttataacataaaggactaaat 19850559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 24858461 - 24858418
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  24858461 gataaaggaccaaactgttacctaaaattaagttaagggactaa 24858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40952125 - 40952066
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  40952125 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 40952066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 2426287 - 2426229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  2426287 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 2426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 14871792 - 14871734
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14871792 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14871734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 19131126 - 19131184
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  19131126 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 19131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 33429789 - 33429847
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  33429789 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 33429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39589673 - 39589615
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39589673 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2094757 - 2094724
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  2094757 atgaagatttacgtttgcctacgagtttgatgaa 2094724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3539781 - 3539748
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  3539781 atgaagatttatgtttgcctatgagtttgatgaa 3539748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23163505 - 23163626
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  23163505 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 23163604  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  23163605 gactaattgtgtaattttgcct 23163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49621559 - 49621438
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  49621559 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 49621460  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  49621459 gactaattgtgtaattttgcct 49621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 26202642 - 26202522
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  26202642 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 26202543  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  26202542 gactaattgtgtaattttgcc 26202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 33692382 - 33692262
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  33692382 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 33692283  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  33692282 gactaattgtgtaattttgcc 33692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 50161342 - 50161460
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  50161342 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 50161441  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| |||||||||    
T  50161442 gactaattgtgtaattttg 50161460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 28458747 - 28458867
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||    
T  28458747 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagg 28458846  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  28458847 gactaattgtgtaattttgcc 28458867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 9526034 - 9526155
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  9526034 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 9526133  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  9526134 gactaattgtgttattttgcct 9526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 48419442 - 48419563
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  48419442 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 48419541  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  48419542 gactaattgtgttattttgcct 48419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 21053521 - 21053642
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||        ||||||||| ||||||||||||||||||||||||||||    
T  21053521 cataaaaaatgataagatattgtcattttataatataaaggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 21053620  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  21053621 gactaattgtgtaattttgcct 21053642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 42857027 - 42857147
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||    
T  42857027 cataaaaaatgataagatattgcaattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagg 42857126  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  42857127 gactaattgtgtaattttgcc 42857147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 37872889 - 37872767
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac--nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||||    
T  37872889 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaa 37872790  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    ||||||||||| |||||||||||    
T  37872789 gggactaattgtgtaattttgcc 37872767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 41689511 - 41689389
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||    
T  41689511 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 41689412  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    ||||||||||| |||||||||||    
T  41689411 gggactaattgtgtaattttgcc 41689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 3546609 - 3546490
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga-cnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |        |||||||||| ||||||||||||||||||||||||||    
T  3546609 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaag 3546510  T
Q  163 ggactaattgcgtaattttg 182  Q
    |||||||||  |||||||||    
T  3546509 ggactaattatgtaattttg 3546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 5260313 - 5260206
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  5260313 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 5260215  T
Q  164 gactaattg 172  Q
    |||||||||    
T  5260214 gactaattg 5260206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 55140317 - 55140198
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  55140317 cataaaaaatgataagatattgtcattttataaaataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 55140219  T
Q  164 gactaattgcgtaattttgcc 184  Q
    || |||| | |||||||||||    
T  55140218 gattaatcgtgtaattttgcc 55140198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 20931202 - 20931324
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||    
T  20931202 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaag 20931301  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    | |||||| | ||||||||||||    
T  20931302 gaactaatcgtgtaattttgcct 20931324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21707830 - 21707948
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||| |||||||| |||||||||||||||||||| ||    
T  21707830 taaaaaatgataagatattgtcatttaataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagaga 21707929  T
Q  166 ctaattgcgtaattttgcc 184  Q
    ||||||| |||||||||||    
T  21707930 ctaattgtgtaattttgcc 21707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 13294723 - 13294614
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||    
T  13294723 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacataaaataaagttaag 13294624  T
Q  163 ggactaattg 172  Q
    ||||||||||    
T  13294623 ggactaattg 13294614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 33369628 - 33369508
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||          || ||||||||||||||||||||||||||||||||||||    
T  33369628 aaaaaatgataagatattgtcattttataacataaatgactaaatcgtgacaaaaaaaaaagaaaaaggacgaaagtgttacctaaaataaagttaaggg 33369529  T
Q  165 actaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||    
T  33369528 actaattgtgtaattttgcct 33369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 46143496 - 46143617
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  46143496 cataaaaaatgataaaatattatcattttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagg 46143595  T
Q  164 gactaattgcgtaattttgcct 185  Q
     |||||||| ||||||||||||    
T  46143596 cactaattgtgtaattttgcct 46143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 52690321 - 52690443
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||          ||||||||||||||||||||||||||||||||||||    
T  52690321 cataaaaaatgataagatattgtcattttataacataaacgactaaatcgtaaccaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 52690420  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    | ||||||||| |||||||||||    
T  52690421 gagactaattgtgtaattttgcc 52690443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 13294847 - 13294949
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13294847 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 13294946  T
Q  183 cct 185  Q
    |||    
T  13294947 cct 13294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 49621682 - 49621784
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49621682 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621781  T
Q  183 cct 185  Q
    |||    
T  49621782 cct 49621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 23163382 - 23163281
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23163382 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23163283  T
Q  183 cc 184  Q
    ||    
T  23163282 cc 23163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 20931079 - 20930974
Alignment:
Q  80 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 179  Q
    ||||||| ||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20931079 atattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatt 20930980  T
Q  180 ttgcct 185  Q
    ||||||    
T  20930979 ttgcct 20930974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 33369736 - 33369854
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| |||||||    
T  33369736 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaag 33369835  T
Q  163 ggactaattgcgtaatttt 181  Q
     ||||||||| ||||||||    
T  33369836 agactaattgtgtaatttt 33369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 25297798 - 25297679
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||    
T  25297798 aaaaatgataaaattgtgtcattttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaggga 25297699  T
Q  166 ctaattgcgtaattttgcct 185  Q
    ||||||| ||||||||||||    
T  25297698 ctaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 9525929 - 9525805
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaa---ggacgaaagtgttacctaaaataaagtt 159  Q
    |||||||||||||||  || |||| ||||||||||||||| ||||||||||||||        ||||||   ||||||||||||||||||||||||||||    
T  9525929 cataaaaaatgataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagtt 9525830  T
Q  160 aagggactaattgcgtaattttgcc 184  Q
    ||||||||||||| |||||||||||    
T  9525829 aagggactaattgtgtaattttgcc 9525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 42856924 - 42856803
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||| |||||    
T  42856924 cataaaaaatgataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattaag 42856826  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||    
T  42856825 ggactaattgtgtaattttgcct 42856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 50161218 - 50161118
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50161218 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 50161119  T
Q  181 t 181  Q
    |    
T  50161118 t 50161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 28458643 - 28458523
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||    
T  28458643 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaa 28458544  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||| |||||||||    
T  28458543 gggactaattgtgtaattttg 28458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 46143373 - 46143273
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  46143373 ttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttg 46143274  T
Q  183 c 183  Q
    |    
T  46143273 c 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30055326 - 30055208
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnnga--taaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||         |  |||||||| ||||||||||||||||| |||||||||||    
T  30055326 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaataaaataaaggacaaaagtgttacctaaaattaagttaaggga 30055227  T
Q  166 ctaattgcgtaattttgcc 184  Q
    ||||||| |||||||||||    
T  30055226 ctaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23549723 - 23549847
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac---nnnnnnnngataaaggacgaaagtgttacctaaaataaagtta 160  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||           |||||||||||||||| ||| ||||||||||||||    
T  23549723 cataaaaaatgatgagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaaaaagataaaggacgaaagtattatctaaaataaagtta 23549822  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    ||| |||||| |  |||||||||||    
T  23549823 aggaactaatcgtataattttgcct 23549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 55742852 - 55742954
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||         ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  55742852 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaaaggactaattgtgtaattttg 55742951  T
Q  183 cct 185  Q
    |||    
T  55742952 cct 55742954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 33692507 - 33692608
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  33692507 ttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttg 33692605  T
Q  183 cct 185  Q
    |||    
T  33692606 cct 33692608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 2686097 - 2685985
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||| ||         | ||| ||||||||||||||||||||| |||||||||||||    
T  2686097 aaaaatgataaaatagcgtcattttataacataaaggactaaatcgttacaaaaa----aaaaaagacgaaagtgttacctaaaattaagttaagggact 2686002  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  2686001 aattgtgtaattttgcc 2685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 37873007 - 37873109
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||| | ||||||||||||||||||||||||   ||||||||    
T  37873007 ttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaagggactaattatataattttg 37873106  T
Q  183 cct 185  Q
    |||    
T  37873107 cct 37873109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3546713 - 3546837
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagtta 160  Q
    |||||||||||||||  || |||| |||||||||||||||||||||||| |||||          |||||| ||||||||||||||||||||||||||||    
T  3546713 cataaaaaatgataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaagataaatgacgaaagtgttacctaaaataaagtta 3546812  T
Q  161 agggactaattgcgtaattttgcct 185  Q
    ||  |||||||| ||||||||||||    
T  3546813 agaaactaattgtgtaattttgcct 3546837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 52690196 - 52690095
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||    
T  52690196 ttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatattacctaaaataaagttaagcgactaattgtgtaattttg 52690098  T
Q  183 cct 185  Q
    |||    
T  52690097 cct 52690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 30799350 - 30799295
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 55742723 - 55742621
Alignment:
Q  82 attgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    ||||||||||||||| |||||||||||||||||||          ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  55742723 attgtcattttataatataaaggactaaatcgtgataaaaaaaaagataa-ggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattt 55742625  T
Q  181 tgcc 184  Q
    ||||    
T  55742624 tgcc 55742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 30799611 - 30799668
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  30799611 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 37531594 - 37531723
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  37531594 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 37531693  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  37531694 atttaaaatgtctaataagcatgtatttta 37531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 30055494 - 30055550
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  30055494 aaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 30055550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 5260437 - 5260538
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| || |||||| ||||        |||||||||||||| |||||||||||||||||||||  ||||||||  |||||||||    
T  5260437 ttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagactaattatgtaattttg 5260536  T
Q  183 cc 184  Q
    ||    
T  5260537 cc 5260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 165
Target Start/End: Complemental strand, 22335554 - 22335454
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||         |||||| |||||||||||||||| |||| |||||||||    
T  22335554 cataaaaaatgagaagatattgtcattttataacgtaaaggaataaatcg-gaacacaaaaagataaaagacgaaagtgttacctgaaattaagttaagg 22335456  T
Q  164 ga 165  Q
    ||    
T  22335455 ga 22335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 23549560 - 23549473
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 170  Q
    |||| ||||||||||||| ||||||||||||| ||        |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  23549560 ttgttattttataacatagaggactaaatcgtaacaaaaaaaagataaaagactaaagtattacctaaaataaagttaagggactaat 23549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 32488642 - 32488583
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  32488642 gataaaggactaaattgttacctaaaataaagttaagggactaaaagtgtaattttgcct 32488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 503
Target Start/End: Complemental strand, 50158637 - 50158506
Alignment:
Q  372 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacat 471  Q
    |||||||||| | |||||||||||||||||||| |||  ||| ||||||||| |  |||||||      |||||||| | ||||||| ||||| | ||||    
T  50158637 atagtgaattaatggtaattttataaatttgttgaagatgttggagattactgggcaattatgtcaccaaaatattaaattcattaaaaaaatgtcacat 50158538  T
Q  472 caatttaacatatctaataaacatgtttttta 503  Q
    |||||||| || |||||||||||||| |||||    
T  50158537 caatttaaaatgtctaataaacatgtatttta 50158506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 30799437 - 30799391
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgt 114  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  30799437 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgt 30799391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 41689636 - 41689734
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||| |||| || ||        |||||||||||||| | |||| ||||||||||||||||| ||||||| ||||||||    
T  41689636 ttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaaggggctaattgtgtaatttt 41689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 50977677 - 50977723
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||    
T  50977677 cataaaaaatgatacgatattgtcattttataatataaaggactaaa 50977723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 53232328 - 53232372
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  53232328 aaaaataataagatattgtcattttataatataaaggactaaatc 53232372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 55140485 - 55140541
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    ||||||||||||||| |||| |||||||||||||| ||| |||||| ||||||||||    
T  55140485 ataaaggacgaaagtattacttaaaataaagttaaaggattaattgtgtaattttgc 55140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 21053399 - 21053329
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaat 153  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| ||| |||||||||||||    
T  21053399 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaaatgttacctaaaat 21053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 25297969 - 25298023
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||| |||| |||||| |||||| |||||||||||||||||| ||||||||    
T  25297969 ataaaggatgaaaatgttacttaaaattaagttaagggactaattgtgtaatttt 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3546650 - 3546683
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3546650 atgaagatttacgtttgcctatgagtttgatgaa 3546683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 9525993 - 9525961
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  9525993 atgaagatttacgtttgcctatgagtttgatga 9525961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20931161 - 20931129
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  20931161 atgaagatttacgtttgcctatgagtttgatga 20931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21707787 - 21707755
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  21707787 atgaagatttacgtttgcctatgagtttgatga 21707755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23163464 - 23163432
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  23163464 atgaagatttacgtttgcctatgagtttgatga 23163432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 23963107 - 23963147
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  23963107 aaaggacgaaattgttacctaaaattaagttaagggactaa 23963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33369673 - 33369705
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  33369673 atgaagatttacgtttgcctatgagtttgatga 33369705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41689553 - 41689585
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  41689553 atgaagatttacgtttgcctatgagtttgatga 41689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42856986 - 42856954
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  42856986 atgaagatttacgtttgcctatgagtttgatga 42856954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 48419401 - 48419369
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  48419401 atgaagatttacgtttgcctatgagtttgatga 48419369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49621600 - 49621632
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  49621600 atgaagatttacgtttgcctatgagtttgatga 49621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55742769 - 55742801
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  55742769 atgaagatttacgtttgcctatgagtttgatga 55742801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9902711 - 9902652
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9902711 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10993683 - 10993624
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  10993683 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 10993624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 20983972 - 20983913
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||  | ||||||||||||    
T  20983972 gataaaggactaaattattacctaaaataaagttaagggaccaaaagtgtaattttgcct 20983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20984170 - 20984229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  20984170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 20984229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 32922323 - 32922382
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  32922323 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 32922382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 42728384 - 42728442
Alignment:
Q  227 tactttgtgaactcaacataacaca--tgtattttttcattgttagatcccaccaagga 283  Q
    |||||||| ||||||||||||||||  ||||||||| |||||  |||||||||||||||    
T  42728384 tactttgttaactcaacataacacatttgtatttttccattgacagatcccaccaagga 42728442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 52654188 - 52654247
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  52654188 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 52654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 21360515 - 21360457
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  21360515 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 21360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 45655948 - 45656006
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||| ||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 45656006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 52538135 - 52538193
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52538135 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52538193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 52653989 - 52653931
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52653989 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 563721 - 563765
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||    
T  563721 aaaaatgacaagatattg-cattttataacacaaaggactaaatcg 563765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 9644808 - 9644767
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  9644808 taaaggaccaaattgttacctaaaattaagttaagggactaa 9644767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 17872437 - 17872388
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||| ||||||| | ||||||||||||| ||||||||||| |||||    
T  17872437 cataaaaattgataaggtgttgtcattttatagcataaaggactcaatcg 17872388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21053480 - 21053447
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  21053480 atgaagatttacgtttgcctacgagtttgatgaa 21053447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 22192611 - 22192582
Alignment:
Q  367 atagcatagtgaattgagggtaattttata 396  Q
    ||||||||||||||||||||||||||||||    
T  22192611 atagcatagtgaattgagggtaattttata 22192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37872924 - 37872957
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  37872924 atgaagatttacgtttgcctacgagtttgatgaa 37872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 43914640 - 43914676
Alignment:
Q  75 ataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||||||||||||||||||||||||| |||||||||    
T  43914640 ataagatattgtcattttataacataaa-gactaaatc 43914676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 22316840 - 22316719
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  22316840 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 22316741  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  22316740 gactaattgtgtaattttgcct 22316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 36229883 - 36229766
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  36229883 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 36229784  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  36229783 gactaattgtgtaatttt 36229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 37513211 - 37513090
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  37513211 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagg 37513112  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  37513111 gactaattgtgttattttgcct 37513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 25847565 - 25847444
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||| ||||||    
T  25847565 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagg 25847466  T
Q  164 gactaattgcgtaattttgcct 185  Q
    |||||||||  |||||||||||    
T  25847465 gactaattgtataattttgcct 25847444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 28829872 - 28829753
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |    
T  28829872 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaaag 28829774  T
Q  164 gactaattgcgtaattttgcc 184  Q
     |||||||| |||||||||||    
T  28829773 aactaattgtgtaattttgcc 28829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 8852030 - 8852152
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  8852030 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 8852129  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| |  |||||||||    
T  8852130 ggactaattgtgctattttgcct 8852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 22975465 - 22975344
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||        |||||| ||| ||| |||||||||||||||||||||||    
T  22975465 cataaaaaataataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagg 22975366  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  22975365 gactaattgtgtaattttgcct 22975344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 48434027 - 48434147
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  48434027 cataaaaaatgataagctattgtcattttataacataaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaag 48434126  T
Q  163 ggactaattgcgtaattttgc 183  Q
    |||||||||| ||||||||||    
T  48434127 ggactaattgtgtaattttgc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 49984936 - 49985038
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||    
T  49984936 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagg 49985035  T
Q  164 gac 166  Q
    |||    
T  49985036 gac 49985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 23043414 - 23043535
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||||||||     
T  23043414 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaa 23043513  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||    
T  23043514 ggactaattgtgtaattttgcc 23043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49621098 - 49620977
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||  |    
T  49621098 cataaaaaatgatgagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttagag 49620999  T
Q  164 gactaattgcgtaattttgcct 185  Q
    || |||| | ||||||||||||    
T  49620998 gattaatcgtgtaattttgcct 49620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 8851905 - 8851803
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8851905 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 8851806  T
Q  183 cct 185  Q
    |||    
T  8851805 cct 8851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 25847669 - 25847791
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||  || |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||    
T  25847669 cataaaaaatgataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaag 25847768  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||    
T  25847769 ggactaattgtgtaattttgcct 25847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 37513340 - 37513436
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37513340 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 37513436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 22316964 - 22317065
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  22316964 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatcgtgtaattttg 22317063  T
Q  183 cc 184  Q
    ||    
T  22317064 cc 22317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 44506162 - 44506049
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |    
T  44506162 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggatt 44506063  T
Q  168 aattgcgtaatttt 181  Q
    ||||| ||||||||    
T  44506062 aattgtgtaatttt 44506049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 17574492 - 17574372
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| ||||||| |    
T  17574492 cataaaaaatgataaaatattgtaattttataacataaaggactaaatcgtaacaaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaatg 17574394  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||| ||||| ||||||||||||    
T  17574393 gacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 49621223 - 49621324
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||| ||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49621223 ttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621322  T
Q  183 cc 184  Q
    ||    
T  49621323 cc 49621324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 11121526 - 11121626
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11121526 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 11121625  T
Q  182 g 182  Q
    |    
T  11121626 g 11121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 55009217 - 55009121
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  55009217 cataaaaaatgattagatattgttattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaagtgttacctaaaataaagttaa 55009121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 22975589 - 22975688
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22975589 ttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 22975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 49711626 - 49711743
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||         |||| ||||||||||||||||||||||||||||||||    
T  49711626 cataaaaaatgataagatattgtcattt-ataacaaaaaggactaaattgtgacaaaaaaaa-ataacggacgaaagtgttacctaaaataaagttaagg 49711723  T
Q  164 gactaattgcgtaattttgc 183  Q
    ||||||||  ||||||||||    
T  49711724 gactaattatgtaattttgc 49711743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 48433901 - 48433801
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48433901 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 48433802  T
Q  181 t 181  Q
    |    
T  48433801 t 48433801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 28829996 - 28830099
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||| ||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  28829996 ttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaatttt 28830095  T
Q  182 gcct 185  Q
    ||||    
T  28830096 gcct 28830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 36230007 - 36230106
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36230007 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaatttt 36230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 49711501 - 49711400
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| |||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  49711501 ttgttattttataacataaatgactaaatcgtga-taaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49711403  T
Q  183 cct 185  Q
    |||    
T  49711402 cct 49711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 11121405 - 11121282
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngata--aaggacgaaagtgttacctaaaataaagttaa 161  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||| ||||||         |||  ||||||||||||||| ||||||||||||||||    
T  11121405 cataaaaattgataagatattgtcattttataacatttaggactaaaccgtgacaaaaaaaaaatataaaggacgaaagtgttgcctaaaataaagttaa 11121306  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||||||||||| |  |||||||||    
T  11121305 gggactaattgtgctattttgcct 11121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 9296440 - 9296382
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  9296440 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtagttttgcct 9296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 33491692 - 33491750
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 33491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 44506288 - 44506389
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  44506288 ttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttg 44506387  T
Q  183 cc 184  Q
    ||    
T  44506388 cc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 55009386 - 55009442
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  55009386 gataaaggacgaaagtgttacttaaaataaagttaagggactaattgtgtaattttg 55009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 3612697 - 3612598
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||| ||         | |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  3612697 ttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaatttt 3612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 9296607 - 9296650
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggact 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9296607 cataaaaaatgataagatattgtcattttataacataaaggact 9296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 33491660 - 33491601
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||    
T  33491660 gataaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgcct 33491601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 23043241 - 23043186
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||    
T  23043241 gataaaggacgaaagtgttacctaaagtaaagttatgggacttattgtgtaatttt 23043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 35850875 - 35850994
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||| |||        ||| ||| |||||||||||||||||||| || ||||      
T  35850875 cataaaaagtgataaggtattgtcattttataacataaaagactaaatcgggac-aaaaaaagatgaagaacgaaagtgttacctaaaattaaattaaaa 35850973  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||| ||||  |||||||||||    
T  35850974 gacgaattatgtaattttgcc 35850994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 1342002 - 1341957
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  1342002 aaaaatgataagatattgtcattttaaaacataaaggaataaatcg 1341957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 10687880 - 10687936
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    ||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  10687880 gataaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaattttg 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2862759 - 2862700
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  2862759 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 2862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 12012829 - 12012782
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  12012829 cataaaaaatgataaaatattgacattttataacataaaagactaaat 12012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41944132 - 41944191
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | ||||||||||||    
T  41944132 gataaaggactaaactattacctaaaataaagttaagggactaaaagtgtaattttgcct 41944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 181
Target Start/End: Original strand, 3612826 - 3612938
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| | |||||||||||||||||||||||||| || |         ||||||| |||||||||||||||||| | ||||||   |||    
T  3612826 aaaaaatgataaaatagtttcattttataacataaaggactaaattgtta--aaaaaaagataaagaacgaaagtgttacctaaagttaagttacaagac 3612923  T
Q  167 taattgcgtaatttt 181  Q
    |||||| ||||||||    
T  3612924 taattgtgtaatttt 3612938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39930691 - 39930633
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||| ||||    
T  39930691 gataaaggactaaagtgttacctaaaattaagttaaaggacgaattgtgtaattatgcc 39930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 43006987 - 43007029
Alignment:
Q  69 aaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  43006987 aaaatgataagatattgtcattttataacataaaaaactaaat 43007029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49711584 - 49711551
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  49711584 atgaagatttacgtttgcctatgagtttgatgaa 49711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8851989 - 8851957
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  8851989 atgaagatttacgtttgcctatgagtttgatga 8851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25847606 - 25847638
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  25847606 atgaagatttacgtttgcctatgagtttgatga 25847638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 49621139 - 49621171
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  49621139 atgaagatttacgtttgcctatgagtttgatga 49621171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 1342180 - 1342235
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||||||||||| ||| || |||||||||||  ||||| ||||||||    
T  1342180 gataaaggacgaaagtgttacttaatattaagttaagggataaattgtgtaatttt 1342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 29196031 - 29195980
Alignment:
Q  229 ctttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 280  Q
    |||||| ||||||  | |||||||| ||||||||||||||||||||||||||    
T  29196031 ctttgtcaactcattaaaacacatgcattttttcattgttagatcccaccaa 29195980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 31574509 - 31574568
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  31574509 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 31574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 50711251 - 50711310
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  50711251 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 50711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 11221050 - 11220992
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  11221050 gataaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 11220992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 14463379 - 14463437
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14463379 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14463437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 20209208 - 20209150
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  20209208 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 20209150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 44664679 - 44664621
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44664679 gataaaggactaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 51000699 - 51000641
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| ||| |||||||||  |||||||||||||||    
T  51000699 gataaaggactaaaacgttacctaaaattaagataagggactgtttgcgtaattttgcc 51000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 7603619 - 7603660
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaagga 105  Q
    ||||||| |||||||||||||| |||||||||| ||||||||    
T  7603619 cataaaatatgataagatattgacattttataatataaagga 7603660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22975506 - 22975539
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  22975506 atgaagatttacgtttgcctacgagtttgatgaa 22975539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 34333775 - 34333730
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||| ||||||| |||||||||||||||| || |||||||    
T  34333775 aaaaatgatatgatattgacattttataacataaaagattaaatcg 34333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 2e-45; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 9320028 - 9320149
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  9320028 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 9320127  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  9320128 gactaattgtgtaattttgcct 9320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 18916745 - 18916624
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  18916745 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 18916646  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  18916645 gactaattgtgtaattttgcct 18916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 17846128 - 17846007
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  17846128 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 17846029  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  17846028 gactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 44536410 - 44536527
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||    
T  44536410 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagg 44536509  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  44536510 gactaattgtgtaatttt 44536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 10044865 - 10044745
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||    
T  10044865 cataaaaaatgataagatattgtcattttataacataaatgactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 10044766  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  10044765 gactaattgtgtaattttgcc 10044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 20364196 - 20364316
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| |    
T  20364196 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaag 20364295  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  20364296 gactaattgtgtaattttgcc 20364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 4261273 - 4261156
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||| ||||||    
T  4261273 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagg 4261174  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  4261173 gactaattgtgtaatttt 4261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 10108934 - 10108813
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  10108934 cataaaaaatgataagatattgtcattttataacataaatgactaaatcgtgacaaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaag 10108835  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||    
T  10108834 ggactaattgtgtaattttgcc 10108813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 2318612 - 2318505
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  2318612 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagg 2318514  T
Q  164 gactaattg 172  Q
    |||||||||    
T  2318513 gactaattg 2318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 8322411 - 8322529
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||| ||||||||||    
T  8322411 ataaaaaatgataagatattgtcattttataacataaaggactaaatcgtga--aaaaaaagataaaggacgaaaatgttacctaaaattaagttaaggg 8322508  T
Q  165 actaattgcgtaattttgcct 185  Q
    || ||||  ||||||||||||    
T  8322509 acgaattctgtaattttgcct 8322529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 27360366 - 27360468
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  27360366 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 27360465  T
Q  183 cct 185  Q
    |||    
T  27360466 cct 27360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 30337540 - 30337424
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||| |||||    
T  30337540 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggact 30337441  T
Q  168 aattgcgtaattttgcc 184  Q
    ||||| |||||||||||    
T  30337440 aattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 9319903 - 9319804
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9319903 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtagttttg 9319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 17846252 - 17846354
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17846252 ttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtataattttg 17846351  T
Q  183 cct 185  Q
    |||    
T  17846352 cct 17846354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 18916869 - 18916971
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18916869 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattatgtaattttg 18916968  T
Q  183 cct 185  Q
    |||    
T  18916969 cct 18916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 27360239 - 27360118
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngata--aaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||         |||  |||||||||| | |||||||||||||||||||||    
T  27360239 taaaaaatgataagatattgtcatttaataacataaaggactaaattgtgacaaaaaaaaaatataaaggacgaaaatattacctaaaataaagttaagg 27360140  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  27360139 gactaattgtgtaattttgcct 27360118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 2318735 - 2318836
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2318735 ttgttattttataacataaaagactaaatcgtgacaaaagaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2318833  T
Q  183 cct 185  Q
    |||    
T  2318834 cct 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 20364071 - 20363970
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  20364071 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattgtgtaattttg 20363972  T
Q  183 cc 184  Q
    ||    
T  20363971 cc 20363970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 601449 - 601327
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagtt-aa 161  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||         |||||||||||||||||||||||||||||||||| ||    
T  601449 cataaaaaatgataagatattgtcattttatattataaaagactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaa 601350  T
Q  162 gggactaattgcgtaattttgcc 184  Q
    | || |||||| |||||||||||    
T  601349 gagattaattgtgtaattttgcc 601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 10109039 - 10109160
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||    
T  10109039 cataaaaaaggataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaatataaaggacgaaagtgttaactaaaataaagttaa 10109138  T
Q  162 gggactaattgcgtaattttgc 183  Q
    |||||||| |||||||||||||    
T  10109139 gggactaagtgcgtaattttgc 10109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 4261377 - 4261502
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    |||||||||||||||  || |||| ||||||||||||| ||||||||||||||||           ||||||||||||||||||||||||||||||||||    
T  4261377 cataaaaaatgataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagtt 4261476  T
Q  160 aagggactaattgcgtaattttgcct 185  Q
    || |||||||||| ||||||||||||    
T  4261477 aacggactaattgtgtaattttgcct 4261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 601620 - 601679
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  601620 gataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 601679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 5547339 - 5547393
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5547339 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 10045035 - 10045092
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10045035 gataaaggacgaaagtgttaactaaaa-aaagttaagggactaattgcgtaattttgcc 10045092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 68 - 181
Target Start/End: Complemental strand, 13862608 - 13862496
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    |||||||| || |||||||||||||||||||||||||||||| ||| |||        |||||||||||||||| |||| |||||| ||||||| ||||     
T  13862608 aaaaatgaaaaaatattgtcattttataacataaaggactaattcgagac-aaaaaaagataaaggacgaaagtattacttaaaattaagttaaaggacg 13862510  T
Q  168 aattgcgtaatttt 181  Q
    ||||| ||||||||    
T  13862509 aattgtgtaatttt 13862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 37084734 - 37084688
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37084734 aaaaaatgataagatattgtcattttataacataaatgactaaatcg 37084688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 18178377 - 18178434
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  18178377 ataaaggacgaaagtattacctaatataaagttaaaggactaattgtgtaattttgcc 18178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 20117767 - 20117722
Alignment:
Q  617 atttagcactcaataagaattattccaaactttggcacttcttatc 662  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20117767 atttagcactcaataagaaatattccaaactttggcacttcttatc 20117722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 44536237 - 44536178
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| | ||| ||||||    
T  44536237 gataaaggacggaagtgttacctaaaataaagttaaaggactaattgtgcaatattgcct 44536178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31769839 - 31769781
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  31769839 ataaaggactaaagtattacctaaaattaagttaagagacgaattgcgtaattttgcct 31769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 10520907 - 10520866
Alignment:
Q  70 aaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  10520907 aaatgataagatattgtcattttataatataaaggactaaat 10520866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 9991968 - 9991921
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  9991968 cataaaaaatgataaaatattgtcattttagaatataaaggactaaat 9991921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30337716 - 30337775
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||| | ||||| ||||||| |||||||||||||||||  ||||||||||||    
T  30337716 gataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcct 30337775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 10714066 - 10714008
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | |||||||||||    
T  10714066 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcc 10714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 43520401 - 43520439
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggac 106  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  43520401 aaaattgataagatattgtcattttataacataaaggac 43520439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 33274653 - 33274710
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||    
T  33274653 gataaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaattttgc 33274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2318653 - 2318685
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  2318653 atgaagatttacgtttgcctatgagtttgatga 2318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 391 - 503
Target Start/End: Original strand, 3395029 - 3395141
Alignment:
Q  391 tttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaata 490  Q
    ||||| |||||||| ||||| ||  | |||| | ||||||||||||    ||||| |||| ||||||| ||||| | |||||||||||| || |||||||    
T  3395029 tttatgaatttgttgaaggaattgaaaattattggataattatgctaccaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaata 3395128  T
Q  491 aacatgtttttta 503  Q
    ||||||| |||||    
T  3395129 aacatgtatttta 3395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18916786 - 18916818
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  18916786 atgaagatttacgtttgcctatgagtttgatga 18916818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20364155 - 20364123
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  20364155 atgaagatttacgtttgcctatgagtttgatga 20364123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27360282 - 27360314
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  27360282 atgaagatttacgtttgcctatgagtttgatga 27360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 1650759 - 1650818
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1650759 gataaaggacaaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 5547308 - 5547347
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggac 106  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  5547308 aaaaaatgataaaataatgtcattttataacataaaggac 5547347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 11723763 - 11723720
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  11723763 gataaaggaccaaactgttacctgaaataaagttaagggactaa 11723720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 30488336 - 30488395
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  30488336 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 30488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 31770014 - 31770057
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||    
T  31770014 aaaaatgataaaatattgtcattttaaaacatagaggactaaat 31770057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40710374 - 40710315
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| |||| | |||||| |||| |||||||||||| ||||| ||||||||||||    
T  40710374 gataaaggatgaaaatattacctgaaattaagttaagggacgaattgtgtaattttgcct 40710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 981822 - 981780
Alignment:
Q  143 ttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  981822 ttacctaaaattaagttaagggacaaattgtgtaattttgcct 981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 5547145 - 5547103
Alignment:
Q  141 tgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||    
T  5547145 tgttatctaaaattaagttaagggactaattgtgtaattttgc 5547103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 26499479 - 26499421
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  26499479 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 26499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 26499667 - 26499725
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  26499667 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35412133 - 35412191
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  35412133 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 35412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 44769387 - 44769421
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaa 102  Q
    ||||||||||||| |||||||||||||||||||||    
T  44769387 aaaaatgataagaaattgtcattttataacataaa 44769421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 2450146 - 2450109
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  2450146 gataaaggactaaactgttacctaaaataaagttaagg 2450109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 28789123 - 28789180
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 183  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  28789123 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 28789180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44536368 - 44536335
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    |||||||||||| |||||||||||||||||||||    
T  44536368 atgaagatttacatttgcctatgagtttgatgaa 44536335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 2e-45; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 2026841 - 2026720
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  2026841 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 2026742  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  2026741 gactaattgtgtaattttgcct 2026720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 1549447 - 1549326
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  1549447 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 1549348  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  1549347 gactaattgtgttattttgcct 1549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 17611650 - 17611771
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  17611650 cataaaaaatgataagatattgacattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 17611749  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||  ||||||||||||    
T  17611750 gactaattatgtaattttgcct 17611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 30002435 - 30002552
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  30002435 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 30002533  T
Q  164 gactaattgcgtaattttg 182  Q
    ||||||||| || ||||||    
T  30002534 gactaattgtgttattttg 30002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 30562903 - 30562783
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  30562903 cataaaaaatgataagatattgtcattttataacataaagaaccaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagg 30562805  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| || |||||||||    
T  30562804 gactaattgtgttattttgcct 30562783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 40902553 - 40902661
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||    
T  40902553 cataaaaaatgataagatattgtcatcttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagg 40902652  T
Q  164 gactaattg 172  Q
    |||||||||    
T  40902653 gactaattg 40902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 12139144 - 12139023
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||| |||||||||||||| |||||     
T  12139144 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaagaacgaaagtattacctaaaataaaattaaga 12139045  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  12139044 gactaattgtgtaattttgcct 12139023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 17985513 - 17985634
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||        |||||||||||||| |||||||||||||||||||||||    
T  17985513 cataaaaaatgataagatattgtcattttataatataaaggattaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagg 17985612  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  17985613 gactaattgtgctattttgcct 17985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 25780115 - 25780231
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||         |||||||||||||||||||||||||||||||||||||    
T  25780115 cataaaaaatgataagatattgtcattttataacataaatgactaaatcatgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagg 25780213  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  25780214 gactaattgtgtaatttt 25780231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 7114089 - 7114208
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||         ||||||||||||||||||| ||||||||||||||| |    
T  7114089 cataaaaaatgataagatattgtcattttataacataaaggactaaattgtgacaaaaaaaa-ataaaggacgaaagtgttatctaaaataaagttaatg 7114187  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  7114188 gactaattgtgtaattttgcc 7114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 40902428 - 40902327
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40902428 ttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40902329  T
Q  183 cc 184  Q
    ||    
T  40902328 cc 40902327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 17611526 - 17611424
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17611526 ttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 17611427  T
Q  183 cct 185  Q
    |||    
T  17611426 cct 17611424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 17985388 - 17985290
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  17985388 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaatttt 17985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 2026964 - 2027065
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| |||||||||||||||||||||||| |||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  2026964 ttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 2027063  T
Q  183 cc 184  Q
    ||    
T  2027064 cc 2027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 7113960 - 7113864
Alignment:
Q  89 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7113960 ttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 12115196 - 12115298
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  12115196 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttg 12115295  T
Q  183 cct 185  Q
    |||    
T  12115296 cct 12115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 30002312 - 30002214
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  30002312 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggactaattgtgtaatttt 30002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 12139273 - 12139370
Alignment:
Q  88 attttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12139273 attttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcc 12139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 30563027 - 30563130
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||    
T  30563027 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatcgtgtaatttt 30563126  T
Q  182 gcct 185  Q
    ||||    
T  30563127 gcct 30563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 25780010 - 25779887
Alignment:
Q  64 cataaaaaatgataag-atattgtcattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaagt 158  Q
    |||||||||||||||  || |||| |||||||||||||||| |||||||||||||            |||||||||||||||||||| ||||||||||||    
T  25780010 cataaaaaatgataactatgttgttattttataacataaagaactaaatcgtgacaaaaaaaaaaaagataaaggacgaaagtgttatctaaaataaagt 25779911  T
Q  159 taagggactaattgcgtaattttg 182  Q
    |||||||||||||| |||||||||    
T  25779910 taagggactaattgtgtaattttg 25779887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 19897277 - 19897176
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||| ||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  19897277 ttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttg 19897178  T
Q  183 cc 184  Q
    ||    
T  19897177 cc 19897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 19897402 - 19897525
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||| |           ||||||||||||||||||||||||| || |||||||    
T  19897402 cataaaaaatgataaaatagtgtcattttataacataaaggattaaatcgttaaaaaaaaaaaagataaaggacgaaagtgttacctaagattaagttaa 19897501  T
Q  162 gggactaattgcgtaattttgcct 185  Q
    ||| ||||||  ||||||||||||    
T  19897502 ggggctaattatgtaattttgcct 19897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 4969609 - 4969711
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||| ||| ||||| ||||||| |||||||| ||||||||| |||||||||    
T  4969609 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagtgactaattgtgtaattttg 4969708  T
Q  183 cct 185  Q
    |||    
T  4969709 cct 4969711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 4969481 - 4969380
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||| ||         |||||||||||||||||||||||||||| ||||||| ||||    
T  4969481 aaaaatgataaaatagtgtcatttaataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaaggac 4969382  T
Q  167 ta 168  Q
    ||    
T  4969381 ta 4969380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 12115074 - 12114954
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaa 161  Q
    ||||||||||||||| ||| | |||||||||||||||||||| |||||||| ||          ||||||||| |||| ||||||||||||| |||||||    
T  12115074 cataaaaaatgataaaatagtatcattttataacataaaggattaaatcgttacaaaaaaaaaagataaaggatgaaaatgttacctaaaattaagttaa 12114975  T
Q  162 gggactaattgcgtaattttg 182  Q
    ||||||||||  |||||||||    
T  12114974 gggactaattatgtaattttg 12114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 503
Target Start/End: Complemental strand, 28962104 - 28961975
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  28962104 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 28962005  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  28962004 atttaaaatgtctaataagcatgtatttta 28961975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  130 aaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 25267441 - 25267499
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||| |||||||||| ||||||| |||||||| |||| |||||||||||||||||    
T  25267441 ataaaggatgaaagtgttatctaaaattaagttaagagactgattgcgtaattttgcct 25267499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5586545 - 5586486
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  5586545 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 5586486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 26874483 - 26874526
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  26874483 gataaaggactaaactgttacctaaaataaagttaagggactaa 26874526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 29233745 - 29233686
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||  |||||||||||    
T  29233745 gataaaggacgagagtgttacttaaaataaagttaagagaccaattggataattttgcct 29233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 441 - 503
Target Start/End: Original strand, 31089937 - 31090000
Alignment:
Q  441 aaatattagactcattaagaaaatttt-acatcaatttaacatatctaataaacatgtttttta 503  Q
    |||||||||||||||||| |||| | | |||||||||||| ||||||||||||||||| |||||    
T  31089937 aaatattagactcattaaaaaaaatgtcacatcaatttaaaatatctaataaacatgtatttta 31090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 35521463 - 35521522
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  35521463 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 35521522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 45315512 - 45315555
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  45315512 gataaaggactaaattgttacctaaaataaagttaagggactaa 45315555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 34480440 - 34480498
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | |||||||||||    
T  34480440 gataaaggactaaattgttacttaaaataaagttaagggactaaaagtgtaattttgcc 34480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 44066951 - 44066997
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  44066951 ataaaaattgataagatattgacattttataacataaatgactaaat 44066997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 49564243 - 49564185
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||    
T  49564243 gataaaggacaaaagtgttacctgaaattaagttaagagacgaattgtgtaattttgcc 49564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 502
Target Start/End: Complemental strand, 31421163 - 31421019
Alignment:
Q  360 agagtatatag--catagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatta 457  Q
    |||||||||||  |||||||| |||   ||||||||||  ||||| | ||||| |||||||||||||  ||||||||||     ||||||||||||| ||    
T  31421163 agagtatatagaacatagtgagttgcaagtaattttatggatttgctgaaggaattagagattactaagtaattatgctaccacaatattagactcaata 31421064  T
Q  458 agaaaattttacatcaatttaacatatctaataaacatgtttttt 502  Q
    | ||| | |  ||||||||||| || |||||||||||||| ||||    
T  31421063 aaaaattgtcccatcaatttaaaatgtctaataaacatgtatttt 31421019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 47193958 - 47194003
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  47193958 aaaaaagataagatattgtcatttaataacataaaagactaaatcg 47194003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7114048 - 7114016
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  7114048 atgaagatttacgtttgcctatgagtttgatga 7114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17611609 - 17611577
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  17611609 atgaagatttacgtttgcctatgagtttgatga 17611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 25267294 - 25267181
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    |||||||||||||||||||||||||||| || ||    ||||||||||| ||        |||||||||||||||||||| ||||||| || ||||||||    
T  25267294 taaaaaatgataagatattgtcattttacaaaat----gactaaatcgtaacaaaaaaa-gataaaggacgaaagtgttatctaaaattaaattaaggga 25267200  T
Q  166 ctaattgcgtaattttgcc 184  Q
     |||||   ||||||||||    
T  25267199 ttaattatataattttgcc 25267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30306896 - 30306852
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||    
T  30306896 aaaaattataagatattgtcattttataatataaaagactaaatc 30306852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30562944 - 30562976
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  30562944 atgaagatttacgtttgcctatgagtttgatga 30562976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40902512 - 40902480
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  40902512 atgaagatttacgtttgcctatgagtttgatga 40902480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 49564599 - 49564655
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 184  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||| |||||||||||    
T  49564599 aaaggacgaaagtgttacctaaaattaagttaaaaggacaaattgtgtaattttgcc 49564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5618129 - 5618070
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  5618129 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 5618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 6489128 - 6489171
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||    
T  6489128 gataaatgactaaactgttacctaaaataaagttaagggactaa 6489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 25012705 - 25012646
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  |  |||||||||||    
T  25012705 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagattaattttgcct 25012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 34480242 - 34480183
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  34480242 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 34480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 2026884 - 2026914
Alignment:
Q  3 gaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||    
T  2026884 gaagatttacgtttgcctatgagtttgatga 2026914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 4695192 - 4695250
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  4695192 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 4695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 7349828 - 7349770
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||||||||| || |||| |||||||||||||||  | |||||||||||    
T  7349828 gataaaggaccaaagtgttatctgaaattaagttaagggactaaaagtgtaattttgcc 7349770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8853352 - 8853410
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8853352 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 9172266 - 9172308
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||||||||||||||| ||| |||||| |||||    
T  9172266 aaaaatgataagatattgtcattttagaacttaaagggctaaa 9172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 9180248 - 9180290
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaa 110  Q
    |||||||||||||||||||||||||| ||| |||||| |||||    
T  9180248 aaaaatgataagatattgtcattttagaacttaaagggctaaa 9180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 28554248 - 28554190
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  28554248 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 28554190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 30002394 - 30002364
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgat 31  Q
    |||||||||||||||||||||||||||||||    
T  30002394 atgaagatttacgtttgcctatgagtttgat 30002364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 31289312 - 31289254
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  31289312 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 31289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 39672894 - 39672836
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39672894 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39672836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 7e-45; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 3922764 - 3922884
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  3922764 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 3922863  T
Q  164 gactaattgcgtaattttgcc 184  Q
    ||||||||| |||||||||||    
T  3922864 gactaattgtgtaattttgcc 3922884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 3218370 - 3218487
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggact 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  3218370 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggact 3218469  T
Q  168 aattgcgtaattttgcct 185  Q
    ||||| ||||||||||||    
T  3218470 aattgtgtaattttgcct 3218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 4243043 - 4242922
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||| |    
T  4243043 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaag 4242944  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  4242943 gactaattgtgtaattttgcct 4242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 33595439 - 33595320
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||||||||||||||    
T  33595439 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagg 33595340  T
Q  164 gactaattgcgtaattttgc 183  Q
    ||||||||| ||||||||||    
T  33595339 gactaattgtgtaattttgc 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 14763438 - 14763319
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||| ||||||||||||||||||||||||||||||    
T  14763438 cataaaaaatgataagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagg 14763339  T
Q  164 gactaattgcgtaattttgc 183  Q
    |||| ||||  |||||||||    
T  14763338 gactgattgtataattttgc 14763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23068923 - 23069042
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||        |||||| ||||||||||||||||||||||||||||||     
T  23068923 cataaaaaatgataagatattgtcattttataacataaag-actaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaagttaaga 23069020  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  23069021 gactaattgtgtaattttgcct 23069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 23068797 - 23068695
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23068797 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23068698  T
Q  183 cct 185  Q
    |||    
T  23068697 cct 23068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 33595564 - 33595666
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33595564 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 33595663  T
Q  183 cct 185  Q
    |||    
T  33595664 cct 33595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 4243167 - 4243269
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4243167 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 4243266  T
Q  183 cct 185  Q
    |||    
T  4243267 cct 4243269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 6755161 - 6755262
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6755161 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 6755260  T
Q  183 cc 184  Q
    ||    
T  6755261 cc 6755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 3218252 - 3218152
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3218252 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3218153  T
Q  183 c 183  Q
    |    
T  3218152 c 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 3922634 - 3922538
Alignment:
Q  89 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3922634 ttttataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 3922538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 6755037 - 6754946
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||| ||||||||||||||    
T  6755037 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacaaaagtattacctaaaataaa 6754946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 14763550 - 14763654
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 180  Q
    |||| ||||||||||| ||||||||||||||||||          |||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  14763550 ttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaagggactaattgtgtaattt 14763649  T
Q  181 tgcct 185  Q
    |||||    
T  14763650 tgcct 14763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 10810201 - 10810322
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||| |||||||||||||||| |||||| ||||||||  ||||        |||||||||| | ||||||||||||||| || |||| |    
T  10810201 cataaaaaataataaaatattgtcattttatatcataaaagactaaataatgacaaaaaaaagataaaggacaagagtgttacctaaaattaaattaaag 10810300  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  10810301 gactaattgtgtaattttgcct 10810322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 14655134 - 14655078
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||    
T  14655134 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaattttg 14655078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 20491722 - 20491766
Alignment:
Q  69 aaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    |||||||||||||||||||||||||||||||||| || |||||||    
T  20491722 aaaatgataagatattgtcattttataacataaatgattaaatcg 20491766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 28852246 - 28852188
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  28852246 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 28852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3218326 - 3218294
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  3218326 atgaagatttacgtttgcctatgagtttgatga 3218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4243084 - 4243116
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  4243084 atgaagatttacgtttgcctatgagtttgatga 4243116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 6755078 - 6755110
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  6755078 atgaagatttacgtttgcctatgagtttgatga 6755110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 497
Target Start/End: Original strand, 15633800 - 15633876
Alignment:
Q  421 actagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgt 497  Q
    ||||| |||||||||| || |||||||||||||||||| ||||  | ||||||| |||| || ||||||||| ||||    
T  15633800 actaggtaattatgctattaaaatattagactcattaaaaaaaggtcacatcaaattaaaatgtctaataaagatgt 15633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 2316745 - 2316804
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  2316745 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 2316804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9899253 - 9899194
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899253 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 9899451 - 9899510
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899451 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 13178479 - 13178522
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  13178479 gataaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 22569019 - 22569062
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  22569019 gataaaggaccaaactgttacctaaaattaagttaagggactaa 22569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24896429 - 24896488
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||| ||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  24896429 gataaatgactaaactgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 24896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 30121584 - 30121639
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||||||||||||||||||||||||||| || |||| |||| || || ||||||||    
T  30121584 gataaaggacgaaagtgttacctaaaattaatttaaaggacgaaatgtgtaatttt 30121639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 32557393 - 32557436
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  32557393 gataaaggaccaaattgttacctaaaattaagttaagggactaa 32557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 1925408 - 1925466
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1925408 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1925466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 10026198 - 10026140
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  10026198 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 10027124 - 10027182
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||  |||||| |||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcct 10027182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 21926121 - 21926063
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21926121 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 11000055 - 11000096
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaa 109  Q
    |||||||||||||||||| |||||||||| |||||| |||||    
T  11000055 aaaaatgataagatattgccattttataatataaagaactaa 11000096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 24176156 - 24176096
Alignment:
Q  225 tgtactttgtgaactcaacataacacatgt--attttttcattgttagatcccaccaagga 283  Q
    |||||||||| ||||||||||||||||| |   |||||||||||  |||||||||||||||    
T  24176156 tgtactttgttaactcaacataacacattttatttttttcattgacagatcccaccaagga 24176096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 1e-40; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 32177975 - 32177854
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||| |    
T  32177975 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaag 32177876  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  32177875 gactaattgtgtaattttgcct 32177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 49113982 - 49113861
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||| |    
T  49113982 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaag 49113883  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| ||||||||||||    
T  49113882 gactaattgtgtaattttgcct 49113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 32523321 - 32523213
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  32523321 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 32523222  T
Q  164 gactaattg 172  Q
    |||||||||    
T  32523221 gactaattg 32523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 28408362 - 28408244
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||    
T  28408362 cataaaaaatgataagatattgtcattttataacataaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 28408263  T
Q  164 gactaattgcgtaattttg 182  Q
    | ||||||| |||||||||    
T  28408262 ggctaattgtgtaattttg 28408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 37453292 - 37453410
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||||    
T  37453292 cataaaaaatgataagatattgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagg 37453391  T
Q  164 gactaattgcgtaattttg 182  Q
    |||| |||| |||||||||    
T  37453392 gactgattgtgtaattttg 37453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 19305969 - 19306090
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||    
T  19305969 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttaactaaaataaagttaagg 19306068  T
Q  164 gactaattgcgtaattttgcct 185  Q
    ||||||||| |  |||||||||    
T  19306069 gactaattgtgctattttgcct 19306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 8437530 - 8437652
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  8437530 cataaaaaatgataagatattggcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaag 8437629  T
Q  163 ggactaattgcgtaattttgcct 185  Q
    |||||||||  ||||||||||||    
T  8437630 ggactaattatgtaattttgcct 8437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 2933494 - 2933615
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  2933494 cataaaaaatgataagatattttcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagg 2933593  T
Q  164 gactaattgcgtaattttgcct 185  Q
     |||||||| |  |||||||||    
T  2933594 aactaattgtgctattttgcct 2933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 7417632 - 7417511
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaag 162  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||    
T  7417632 catacaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaag 7417533  T
Q  163 ggactaattgcgtaattttgcc 184  Q
    ||| |||||| |||||||||||    
T  7417532 ggattaattgtgtaattttgcc 7417511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 45746950 - 45747070
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||| |||||     
T  45746950 cataaaaaatgataagatattgtcattttataacataaa-gactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaga 45747048  T
Q  164 gactaattgcgtaattttgcct 185  Q
     ||||||||  |||||||||||    
T  45747049 aactaattgtataattttgcct 45747070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 32523447 - 32523546
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32523447 ttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 32523546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 1511416 - 1511533
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| | ||||||||||||    
T  1511416 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa-gataaaggacgaaagtgttacctaaatttaagttaagggac 1511514  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||| ||||||||||||    
T  1511515 taattgtgtaattttgcct 1511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 10878744 - 10878624
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaaggg 164  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| ||||||||||    
T  10878744 aaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaaggg 10878645  T
Q  165 actaattgcgtaattttgcct 185  Q
    |||||||| ||||||||||||    
T  10878644 actaattgtgtaattttgcct 10878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 28408486 - 28408587
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28408486 ttgttattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 28408584  T
Q  183 cct 185  Q
    |||    
T  28408585 cct 28408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 32832354 - 32832246
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||        |||||| ||  |||||||||||||||||||| ||||||    
T  32832354 cataaaaaatgataagatattgtcattttataacataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagg 32832255  T
Q  164 gactaattg 172  Q
    |||||||||    
T  32832254 gactaattg 32832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 66 - 185
Target Start/End: Complemental strand, 31894374 - 31894257
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaaggga 165  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| |||||||||||    
T  31894374 taaaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaa--ataaaggacgaaagtgttacctaaaattaagttaaggga 31894277  T
Q  166 ctaattgcgtaattttgcct 185  Q
    ||| ||| ||||||||||||    
T  31894276 ctatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 8437406 - 8437304
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||| ||||        ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8437406 ttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattgtgtaattttg 8437307  T
Q  183 cct 185  Q
    |||    
T  8437306 cct 8437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 83 - 181
Target Start/End: Original strand, 32178099 - 32178197
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  32178099 ttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 32178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 7417757 - 7417858
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7417757 ttgttattttataacaaaaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 7417855  T
Q  183 cct 185  Q
    |||    
T  7417856 cct 7417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 32832475 - 32832576
Alignment:
Q  80 atattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatt 179  Q
    ||||||| |||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  32832475 atattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatt 32832574  T
Q  180 tt 181  Q
    ||    
T  32832575 tt 32832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 2933387 - 2933289
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    |||| |||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2933387 ttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 2933289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 19305798 - 19305739
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19305798 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 19305739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 49114150 - 49114209
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49114150 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 49114209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 24986819 - 24986719
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||| |||||||||  |||||||||    
T  24986819 ttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggactaatt--gtaattttg 24986722  T
Q  183 cct 185  Q
    |||    
T  24986721 cct 24986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 44307738 - 44307610
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac-------nnnnnnnngataaaggacgaaagtgttacctaaaataaa 156  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||                ||||||||||||||||||||||||||| ||    
T  44307738 cataaaaaatgataaaatagtgtcattttataatataaaggactaaatcgttacaaaaaaaaaaaaaaaaataaaggacgaaagtgttacctaaaattaa 44307639  T
Q  157 gttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||| ||||||||||||    
T  44307638 gttaagggactaattgtgtaattttgcct 44307610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 29226390 - 29226337
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgac 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29226390 cataaaaaatgataagatattatcattttataacataaaggactaaatcgtgac 29226337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 31894500 - 31894601
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  31894500 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 31894598  T
Q  183 cct 185  Q
    |||    
T  31894599 cct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 1511290 - 1511190
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||| | ||||||||||| |||||||||||||||||| |||||||||    
T  1511290 ttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttg 1511192  T
Q  183 cc 184  Q
    ||    
T  1511191 cc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 44307906 - 44307964
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||||| |||||||||||    
T  44307906 gataaagaacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcc 44307964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 45746825 - 45746739
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||| ||||||||||||| |||| |||||||||||         |||||||| |||||||||||||||||||||| |||||||||||    
T  45746825 ttgttattttataacatagaggattaaatcgtgacaaaaaataaataaaggaagaaagtgttacctaaaataaaggtaagggactaa 45746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 27612284 - 27612329
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcg 113  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||    
T  27612284 aaaaatgataagatattgtcattttataacatataagactaaatcg 27612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 30060630 - 30060675
Alignment:
Q  66 taaaaaatgataagatattgtcattttataacataaaggactaaat 111  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||    
T  30060630 taaaaaatgataaaatattgtcatttcataacataaaggactaaat 30060675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 7172989 - 7172930
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  7172989 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 7172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 4119569 - 4119619
Alignment:
Q  385 ggtaattttataaatttgttaaaggagttagagattactagataattatgc 435  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  4119569 ggtaattttataaatttgttgaagcagttggagattactaggtaattatgc 4119619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 503
Target Start/End: Complemental strand, 24708945 - 24708831
Alignment:
Q  387 taattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatct 486  Q
    |||||||||  ||||||| |||||||| ||  ||| | ||||||||||||    ||||||||||||| |||| ||||| | |||||||||||| || |||    
T  24708945 taattttatggatttgttgaaggagttgga--ttattggataattatgctaccaaaatattagactctttaaaaaaatgtcacatcaatttaaaatgtct 24708848  T
Q  487 aataaacatgtttttta 503  Q
    ||||| ||||| |||||    
T  24708847 aataagcatgtatttta 24708831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 37452511 - 37452478
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagtt 159  Q
    ||||||||||||||||||||||||||||||||||    
T  37452511 gataaaggacgaaagtgttacctaaaataaagtt 37452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 8437489 - 8437457
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  8437489 atgaagatttacgtttgcctatgagtttgatga 8437457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 8869640 - 8869584
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||||||||  ||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  8869640 gataaaggaataaaatgttacctaaaattaagttaagggacgaattgtgtaattttg 8869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 28408403 - 28408435
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  28408403 atgaagatttacgtttgcctatgagtttgatga 28408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32178016 - 32178048
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32178016 atgaagatttacgtttgcctatgagtttgatga 32178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 32523362 - 32523394
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatga 33  Q
    |||||||||||||||||||||||||||||||||    
T  32523362 atgaagatttacgtttgcctatgagtttgatga 32523394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 8522382 - 8522323
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 10543667 - 10543710
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||  ||| |||||||||||||||||||||||||||||    
T  10543667 gataaaggatcaaactgttacctaaaataaagttaagggactaa 10543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 169
Target Start/End: Original strand, 34287773 - 34287816
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 169  Q
    |||||||||| |||||||||||| |||| |||||||||||||||    
T  34287773 gataaaggaccaaagtgttacctgaaattaagttaagggactaa 34287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 38495170 - 38495229
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  38495170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 38495229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 41922340 - 41922281
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  41922340 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 41922281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43575306 - 43575365
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 43575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 45055380 - 45055321
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055380 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 45055578 - 45055637
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055578 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 10878921 - 10878975
Alignment:
Q  127 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 181  Q
    ||||||||||||| | ||| ||||||| ||||||||| |||||||| ||||||||    
T  10878921 ataaaggacgaaaatattagctaaaattaagttaaggtactaattgtgtaatttt 10878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 12423903 - 12423845
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  12423903 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 21733126 - 21733068
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||| ||| ||| |||||||| |||| |||||||||||||||| | |||||||||||    
T  21733126 gataaaagaccaaactgttacctgaaattaagttaagggactaatagtgtaattttgcc 21733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 31283409 - 31283467
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||| |||||| |||||||||||||||  | |||||||||||    
T  31283409 gataaaggaccaaactgttacataaaattaagttaagggactaaaagtgtaattttgcc 31283467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 37453179 - 37453145
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgac 117  Q
    |||| ||||||||||||||||||||||||||||||    
T  37453179 ttgttattttataacataaaggactaaatcgtgac 37453145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 42391354 - 42391296
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  42391354 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 42391296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 44458040 - 44458098
Alignment:
Q  126 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44458040 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44458098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1511371 - 1511338
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  1511371 atgaagatttacgtttgtctatgagtttgatgaa 1511338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 43161650 - 43161703
Alignment:
Q  131 aggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    ||||||||||| ||| || |||| |||||||||||| ||||| |||||||||||    
T  43161650 aggacgaaagtattagctgaaattaagttaagggacaaattgtgtaattttgcc 43161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44307778 - 44307811
Alignment:
Q  1 atgaagatttacgtttgcctatgagtttgatgaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  44307778 atgaagatttacgtttgtctatgagtttgatgaa 44307811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 137142 - 137260
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || ||||    
T  137142 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggac 137241  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||  ||||||||||||    
T  137242 taattatgtaattttgcct 137260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 137017 - 136915
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  137017 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 136918  T
Q  183 cct 185  Q
    |||    
T  136917 cct 136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 330423 - 330541
Alignment:
Q  67 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || ||||    
T  330423 aaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggac 330522  T
Q  167 taattgcgtaattttgcct 185  Q
    |||||  ||||||||||||    
T  330523 taattatgtaattttgcct 330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 330298 - 330196
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  330298 ttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 330199  T
Q  183 cct 185  Q
    |||    
T  330198 cct 330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 12841 - 12943
Alignment:
Q  83 ttgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 182  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||||    
T  12841 ttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttg 12940  T
Q  183 cct 185  Q
    |||    
T  12941 cct 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 12713 - 12632
Alignment:
Q  68 aaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttaccta 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||    
T  12713 aaaaatgataaaatagtgtcattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttaccta 12632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1577 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 64 - 181
Target Start/End: Original strand, 1097 - 1214
Alignment:
Q  64 cataaaaaatgataagatattgtcattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 163  Q
    |||||||||| |||| |||| ||||||||||| |||||| ||||||||||||||        ||||||| |||| ||||||||||||||| || |||| |    
T  1097 cataaaaaataataaaatatagtcattttatatcataaaagactaaatcgtgacaaaaaaaagataaagaacgagagtgttacctaaaattaaattaaag 1196  T
Q  164 gactaattgcgtaatttt 181  Q
    ||||||||| ||||||||    
T  1197 gactaattgtgtaatttt 1214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  128 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 185  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 11995 - 11940
Alignment:
Q  129 aaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 184  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  11995 aaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 503
Target Start/End: Original strand, 96248 - 96377
Alignment:
Q  374 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 473  Q
    ||||||||||||||||||||||| ||||||| |||  ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  96248 agtgaattgagggtaattttatagatttgttgaagatgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 96347  T
Q  474 atttaacatatctaataaacatgtttttta 503  Q
    |||||| || |||||||| ||||| |||||    
T  96348 atttaaaatgtctaataagcatgtatttta 96377  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 15263 - 15310
Alignment:
Q  65 ataaaaaatgataagatattgtcattttataacataaaggactaaatc 112  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  15263 ataaaaaattataagaaattgtcattttataacataaagaactaaatc 15310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 1115 - 1070
Alignment:
Q  371 catagtgaattgagggtaattttataaatttgttaaaggagttaga 416  Q
    |||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  1115 catagtaaattgatggtaattatataagtttgttaaaggagttaga 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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